Haladaptatus halobius strain PSR5 plasmid unnamed3, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haladaptataceae; Haladaptatus.
Halophilic archaea isolated from solar salterns and salt lakes
Submitted (19-OCT-2021) School of Food and Biological Engineering, Jiangsu University, No 301 Xuefu Road, Jingkou District, Zhenjiang, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP085339.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: FALCON v. 3\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 156.0x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 13:46:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,673\nCDSs (total) :: 7,610\nGenes (coding) :: 7,335\nCDSs (with protein) :: 7,335\nGenes (RNA) :: 63\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 2\nPseudo Genes (total) :: 275\nCDSs (without protein) :: 275\nPseudo Genes (ambiguous residues) :: 0 of 275\nPseudo Genes (frameshifted) :: 105 of 275\nPseudo Genes (incomplete) :: 162 of 275\nPseudo Genes (internal stop) :: 105 of 275\nPseudo Genes (multiple problems) :: 82 of 275\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012792.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019949.2
COORDINATES: protein motif:HMM:NF025049.2
COORDINATES: similar to AA sequence:RefSeq:WP_008577347.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944581.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007740753.1
COORDINATES: similar to AA sequence:RefSeq:WP_010612125.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694852.1
COORDINATES: similar to AA sequence:RefSeq:WP_004050922.1
COORDINATES: similar to AA sequence:RefSeq:WP_006113982.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740772.1
COORDINATES: similar to AA sequence:RefSeq:WP_004053348.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007741681.1
COORDINATES: similar to AA sequence:RefSeq:WP_011317830.1
COORDINATES: similar to AA sequence:RefSeq:WP_008584561.1
COORDINATES: protein motif:HMM:NF024248.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF020416.2
acyl-CoA thioester hydrolase/BAAT C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025217.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012334.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076612197.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008323628.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF022932.2
COORDINATES: protein motif:HMM:NF036395.2
COORDINATES: protein motif:HMM:NF024109.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014626.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006974 - DNA damage response [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007977628.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007982848.1
COORDINATES: protein motif:HMM:NF027245.2
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_006112551.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595756.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595053.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004595054.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595063.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004595064.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693543.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595066.1
COORDINATES: protein motif:HMM:NF013161.2
COORDINATES: similar to AA sequence:RefSeq:WP_006823991.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_004595070.1
COORDINATES: similar to AA sequence:RefSeq:WP_015320572.1
GO:0050043 - lactate racemase activity [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
lactate racemase domain-containing protein
COORDINATES: protein motif:HMM:NF024850.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004595071.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012120410.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595073.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214218.1
GO:0102662 - malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity [Evidence IEA]
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF012517.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_004595061.1
COORDINATES: protein motif:HMM:NF014084.2
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004595079.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595081.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: protein motif:HMM:NF012678.2
iron-containing alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004599228.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008414494.1
GO:0003824 - catalytic activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF013757.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007188052.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - DNA transposition [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006667208.1
COORDINATES: protein motif:HMM:NF012791.2
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006667810.1
GO:0016208 - AMP binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005045061.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - intracellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007742178.1
COORDINATES: similar to AA sequence:RefSeq:WP_008893355.1
COORDINATES: similar to AA sequence:RefSeq:WP_005042091.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983031.1
spore germination protein GerW family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008416725.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060563.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595175.1
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008162438.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847149.1
low molecular weight phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004958881.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008307757.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_015763674.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594229.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594228.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976825.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983454.1
COORDINATES: similar to AA sequence:RefSeq:WP_008094615.1
COORDINATES: similar to AA sequence:RefSeq:WP_012941783.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006184671.1
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008385082.1
COORDINATES: similar to AA sequence:RefSeq:WP_008445818.1
COORDINATES: similar to AA sequence:RefSeq:WP_010902929.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983223.1
COORDINATES: similar to AA sequence:RefSeq:WP_006087910.1
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_008094626.1
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: similar to AA sequence:RefSeq:WP_012942496.1
COORDINATES: similar to AA sequence:RefSeq:WP_012996418.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_015233269.1
geranylgeranylglycerol-phosphate geranylgeranyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007979302.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981367.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981365.1
COORDINATES: similar to AA sequence:RefSeq:WP_006093052.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975914.1
COORDINATES: protein motif:HMM:NF036897.2
COORDINATES: similar to AA sequence:RefSeq:WP_007981358.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847061.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975917.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015911463.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_015911459.1
COORDINATES: protein motif:HMM:NF013584.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010676841.1
COORDINATES: protein motif:HMM:NF013275.2
COORDINATES: similar to AA sequence:RefSeq:WP_004214491.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694234.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895581.1
COORDINATES: similar to AA sequence:RefSeq:WP_004518643.1
COORDINATES: similar to AA sequence:RefSeq:WP_007540991.1
COORDINATES: similar to AA sequence:RefSeq:WP_007142024.1
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012945671.1
COORDINATES: similar to AA sequence:RefSeq:WP_007696247.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_006826328.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007979301.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975929.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975933.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885228.1
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF024502.2
phage integrase SAM-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012289756.1
COORDINATES: similar to AA sequence:RefSeq:WP_020707587.1
GO:0070004 - cysteine-type exopeptidase activity [Evidence IEA]; GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_005557527.1
COORDINATES: similar to AA sequence:RefSeq:WP_006432994.1
Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine, L-proline or other amino acids, choline, carnitine, etc. The substrate specificity is best determined from the substrate-binding subunit, rather than this subunit, as it interacts with the permease subunit and not with substrate directly; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006066919.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983269.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007983268.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983267.1
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007983266.1
COORDINATES: protein motif:HMM:NF025178.2
COORDINATES: similar to AA sequence:RefSeq:WP_007983264.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007983262.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667574.1
COORDINATES: protein motif:HMM:NF036686.2
COORDINATES: similar to AA sequence:RefSeq:WP_007979290.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_008415652.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006110690.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007273914.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981423.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981498.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981497.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981530.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006114773.1
COORDINATES: similar to AA sequence:RefSeq:WP_004978363.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014050744.1
COORDINATES: similar to AA sequence:RefSeq:WP_008093868.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006114769.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050747.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050748.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008893867.1
COORDINATES: similar to AA sequence:RefSeq:WP_008585179.1
COORDINATES: protein motif:HMM:NF021759.2
COORDINATES: protein motif:HMM:NF016330.2
COORDINATES: similar to AA sequence:RefSeq:WP_004060804.1
COORDINATES: similar to AA sequence:RefSeq:WP_008475034.1
COORDINATES: similar to AA sequence:RefSeq:WP_007982938.1
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016883650.1
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008422626.1
COORDINATES: similar to AA sequence:RefSeq:WP_008390100.1
COORDINATES: similar to AA sequence:RefSeq:WP_010353054.1
COORDINATES: similar to AA sequence:RefSeq:WP_008323724.1
COORDINATES: protein motif:HMM:NF040028.1
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: similar to AA sequence:RefSeq:WP_007981519.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983581.1
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_007981635.1
COORDINATES: similar to AA sequence:RefSeq:WP_006053328.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009762052.1
COORDINATES: similar to AA sequence:RefSeq:WP_018258818.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008456023.1
COORDINATES: similar to AA sequence:RefSeq:WP_018129032.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524566.1
COORDINATES: similar to AA sequence:RefSeq:WP_005040245.1
COORDINATES: similar to AA sequence:RefSeq:WP_006671271.1
COORDINATES: similar to AA sequence:RefSeq:WP_007697820.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_005041029.1
COORDINATES: protein motif:HMM:NF021897.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006183470.1
COORDINATES: similar to AA sequence:RefSeq:WP_007108034.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979252.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981003.1
putative phosphoglycerol geranylgeranyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004054293.1
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
formate/nitrite transporter family protein
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013879100.1
COORDINATES: protein motif:HMM:NF013715.2
COORDINATES: similar to AA sequence:RefSeq:WP_008423581.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007977030.1
COORDINATES: similar to AA sequence:RefSeq:WP_006179382.1
COORDINATES: similar to AA sequence:RefSeq:WP_005559896.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827880.1
COORDINATES: protein motif:HMM:NF033497.1
rubrerythrin-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008390029.1
COORDINATES: protein motif:HMM:NF020976.2
COORDINATES: similar to AA sequence:RefSeq:WP_008894501.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_007981869.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978797.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076556.1
COORDINATES: protein motif:HMM:NF039283.1
COORDINATES: similar to AA sequence:RefSeq:WP_004052080.1
COORDINATES: protein motif:HMM:NF017591.2
COORDINATES: similar to AA sequence:RefSeq:WP_020221666.1
COORDINATES: similar to AA sequence:RefSeq:WP_017884692.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: similar to AA sequence:RefSeq:WP_009366217.1
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006653651.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008895196.1
COORDINATES: similar to AA sequence:RefSeq:WP_006184169.1
COORDINATES: similar to AA sequence:RefSeq:WP_013878539.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056459.1
COORDINATES: protein motif:HMM:NF020645.2
COORDINATES: similar to AA sequence:RefSeq:WP_008416850.1
COORDINATES: protein motif:HMM:NF012364.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005040828.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981108.1
COORDINATES: similar to AA sequence:RefSeq:WP_015322037.1
COORDINATES: similar to AA sequence:RefSeq:WP_008445009.1
COORDINATES: similar to AA sequence:RefSeq:WP_004050160.1
COORDINATES: similar to AA sequence:RefSeq:WP_007109109.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060156.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008383067.1
COORDINATES: similar to AA sequence:RefSeq:WP_008423659.1
COORDINATES: similar to AA sequence:RefSeq:WP_009366552.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975920.1
COORDINATES: similar to AA sequence:RefSeq:WP_007260256.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005554209.1
COORDINATES: similar to AA sequence:RefSeq:WP_010904240.1
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008093173.1
COORDINATES: protein motif:HMM:NF014344.2
COORDINATES: similar to AA sequence:RefSeq:WP_007981428.1
COORDINATES: similar to AA sequence:RefSeq:WP_006087889.1
GO:0018822 - nitrile hydratase activity [Evidence IEA]
GO:0050898 - nitrile metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006087888.1
COORDINATES: similar to AA sequence:RefSeq:WP_006087887.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: similar to AA sequence:RefSeq:WP_007999278.1
COORDINATES: similar to AA sequence:RefSeq:WP_004044077.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007981005.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979291.1
COORDINATES: similar to AA sequence:RefSeq:WP_014630596.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190058.1
COORDINATES: similar to AA sequence:RefSeq:WP_018258797.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_007740264.1
COORDINATES: similar to AA sequence:RefSeq:WP_009376307.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735464.1
COORDINATES: protein motif:HMM:NF019013.2
COORDINATES: similar to AA sequence:RefSeq:WP_020578761.1
COORDINATES: protein motif:HMM:NF018479.2
COORDINATES: similar to AA sequence:RefSeq:WP_004967256.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190274.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_014051011.1
COORDINATES: similar to AA sequence:RefSeq:WP_008422487.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557478.1
GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA]
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
CDGSH iron-sulfur domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006824165.1
COORDINATES: similar to AA sequence:RefSeq:WP_008092524.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012471.2
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005579631.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005557488.1
COORDINATES: similar to AA sequence:RefSeq:WP_008382778.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008418075.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250644.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222493.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980805.1
COORDINATES: similar to AA sequence:RefSeq:WP_006113517.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_004044383.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: similar to AA sequence:RefSeq:WP_007981392.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945391.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015955889.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983032.1
COORDINATES: similar to AA sequence:RefSeq:WP_007982027.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_007975915.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388354.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: similar to AA sequence:RefSeq:WP_018256645.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895732.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693900.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693902.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595118.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_006827390.1
GO:0046556 - alpha-L-arabinofuranosidase activity [Evidence IEA]
GO:0046373 - L-arabinose metabolic process [Evidence IEA]
alpha-L-arabinofuranosidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008097042.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599981.1
COORDINATES: similar to AA sequence:RefSeq:WP_008417696.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004055476.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388282.1
COORDINATES: similar to AA sequence:RefSeq:WP_006106855.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
SMP-30/gluconolactonase/LRE family protein
COORDINATES: protein motif:HMM:NF016994.2
COORDINATES: similar to AA sequence:RefSeq:WP_004060648.1
COORDINATES: similar to AA sequence:RefSeq:WP_015300317.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011249692.1
COORDINATES: protein motif:HMM:TIGR02246.1
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_006183368.1
COORDINATES: protein motif:HMM:NF033480.1
bifunctional lysylphosphatidylglycerol flippase/synthetase MprF
COORDINATES: similar to AA sequence:RefSeq:WP_015321539.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977974.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007981501.1
COORDINATES: similar to AA sequence:RefSeq:WP_020222877.1
COORDINATES: similar to AA sequence:RefSeq:WP_006106747.1
COORDINATES: similar to AA sequence:RefSeq:WP_006106944.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886077.1
COORDINATES: protein motif:HMM:NF025343.2
COORDINATES: similar to AA sequence:RefSeq:WP_004592098.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976781.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_006827254.1
COORDINATES: similar to AA sequence:RefSeq:WP_008443411.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383808.1
COORDINATES: protein motif:HMM:NF016906.2
COORDINATES: protein motif:HMM:NF012355.2
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012945822.1
COORDINATES: similar to AA sequence:RefSeq:WP_006660635.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_006078864.1
COORDINATES: protein motif:HMM:TIGR01428.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008307154.1
COORDINATES: similar to AA sequence:RefSeq:WP_004053425.1
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007977534.1
COORDINATES: similar to AA sequence:RefSeq:WP_010903365.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367739.1
COORDINATES: similar to AA sequence:RefSeq:WP_010904188.1
COORDINATES: protein motif:HMM:NF019095.2
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: protein motif:HMM:TIGR00745.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025156.2
COORDINATES: protein motif:HMM:NF024804.2
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007190197.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885110.1
COORDINATES: similar to AA sequence:RefSeq:WP_005581540.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107192.1
COORDINATES: similar to AA sequence:RefSeq:WP_012942015.1
bacterio-opsin activator domain-containing protein
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012659250.1
COORDINATES: similar to AA sequence:RefSeq:WP_008525916.1
COORDINATES: protein motif:HMM:NF019135.2
COORDINATES: similar to AA sequence:RefSeq:WP_007983213.1
COORDINATES: similar to AA sequence:RefSeq:WP_008368186.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983325.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004268146.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004060471.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097115.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367660.1
COORDINATES: similar to AA sequence:RefSeq:WP_005043748.1
COORDINATES: similar to AA sequence:RefSeq:WP_004216118.1
COORDINATES: similar to AA sequence:RefSeq:WP_004956654.1
COORDINATES: protein motif:HMM:NF024825.2
COORDINATES: similar to AA sequence:RefSeq:WP_004599042.1
COORDINATES: similar to AA sequence:RefSeq:WP_007997152.1
COORDINATES: similar to AA sequence:RefSeq:WP_008001549.1
COORDINATES: similar to AA sequence:RefSeq:WP_004053671.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827831.1
COORDINATES: similar to AA sequence:RefSeq:WP_012355870.1
COORDINATES: similar to AA sequence:RefSeq:WP_008417965.1
N-acyl homoserine lactonase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006107441.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0047988 - hydroxyacid-oxoacid transhydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024591.2
COORDINATES: similar to AA sequence:RefSeq:WP_006056405.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694266.1
COORDINATES: similar to AA sequence:RefSeq:WP_015762470.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693138.1
COORDINATES: similar to AA sequence:RefSeq:WP_005040078.1
COORDINATES: similar to AA sequence:RefSeq:WP_009365890.1
COORDINATES: similar to AA sequence:RefSeq:WP_006108667.1
COORDINATES: protein motif:HMM:NF019845.2
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF014080.2
COORDINATES: similar to AA sequence:RefSeq:WP_018129123.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007992683.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222488.1
COORDINATES: protein motif:HMM:NF018933.2
COORDINATES: similar to AA sequence:RefSeq:WP_012943019.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_006106880.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222237.1
COORDINATES: similar to AA sequence:RefSeq:WP_009761288.1
COORDINATES: similar to AA sequence:RefSeq:WP_018219284.1
PLP-dependent aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008610949.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980990.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980991.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978165.1
type II CAAX endopeptidase family protein
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: similar to AA sequence:RefSeq:WP_006885787.1
COORDINATES: similar to AA sequence:RefSeq:WP_007691994.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_007982961.1
COORDINATES: similar to AA sequence:RefSeq:WP_004055879.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694692.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008416954.1
COORDINATES: similar to AA sequence:RefSeq:WP_005046810.1
COORDINATES: protein motif:HMM:NF019607.2