Brucepastera parasyntrophica strain RmG11 chromosome, complete genome.
Bacteria; Spirochaetes; Spirochaetales; Treponemataceae; Brucepastera.
Comparative analyses of Brucepasteria parasyntrophica and Teretinema zuelzerae
Submitted (04-OCT-2021) RG Insect Gut Microbiology and Symbiosis, Max Planck Institute for Terrestrial Microbiology, Karl-von-Frisch-Strasse 10, Marburg 35043, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP084606.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nBacteria and source DNA available from DSMZ German Collection of\nMicroorganisms and Cell Cultures; Japan collection of\nmicroorganisms.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 268.34x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/29/2022 03:58:42\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,097\nCDSs (total) :: 3,041\nGenes (coding) :: 2,877\nCDSs (with protein) :: 2,877\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 164\nCDSs (without protein) :: 164\nPseudo Genes (ambiguous residues) :: 0 of 164\nPseudo Genes (frameshifted) :: 138 of 164\nPseudo Genes (incomplete) :: 32 of 164\nPseudo Genes (internal stop) :: 1 of 164\nPseudo Genes (multiple problems) :: 7 of 164\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Brucepastera parasyntrophica
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_006189667.1
GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013757211.1
GO:0033958 - DNA-deoxyinosine glycosylase activity [Evidence IEA]
GO:0006285 - base-excision repair, AP site formation [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013313585.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002678886.1
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: similar to AA sequence:RefSeq:WP_016524712.1
COORDINATES: similar to AA sequence:RefSeq:WP_010882172.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968989.1
COORDINATES: similar to AA sequence:RefSeq:WP_010882170.1
COORDINATES: similar to AA sequence:RefSeq:WP_010882169.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758729.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523505.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002676248.1
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016250.2
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002687853.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.; The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: similar to AA sequence:RefSeq:WP_002700950.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525247.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002673317.1
COORDINATES: similar to AA sequence:RefSeq:WP_018525967.1
COORDINATES: protein motif:HMM:NF012662.2
COORDINATES: similar to AA sequence:RefSeq:WP_002667109.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968974.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002667114.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF025021.2
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009105354.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_002697984.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002700544.1
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: similar to AA sequence:RefSeq:WP_010699289.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701621.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522223.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881876.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697437.1
COORDINATES: similar to AA sequence:RefSeq:WP_012460548.1
produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002705553.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF020083.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012925.2
COORDINATES: similar to AA sequence:RefSeq:WP_015713150.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF021926.2
FIST C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013314033.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: protein motif:HMM:NF025268.2
COORDINATES: similar to AA sequence:RefSeq:WP_015707577.1
COORDINATES: protein motif:HMM:NF024824.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002706286.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002700243.1
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519753.1
COORDINATES: similar to AA sequence:RefSeq:WP_002667241.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002667239.1
GO:0009279 - cell outer membrane [Evidence IEA]
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_010694715.1
COORDINATES: similar to AA sequence:RefSeq:WP_002699253.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009107263.1
COORDINATES: similar to AA sequence:RefSeq:WP_002669813.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013969064.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697461.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524978.1
COORDINATES: protein motif:HMM:NF039484.1
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015708205.1
COORDINATES: similar to AA sequence:RefSeq:WP_013314766.1
COORDINATES: similar to AA sequence:RefSeq:WP_002689143.1
COORDINATES: protein motif:HMM:TIGR01085.1
UDP-N-acetylmuramyl-tripeptide synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_010259235.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016524023.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525937.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013701423.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010255659.1
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_016525461.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968640.1
COORDINATES: similar to AA sequence:RefSeq:WP_010699072.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758482.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_015707822.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_015712511.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006188079.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002668885.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010254822.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712498.1
GO:0047343 - glucose-1-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002693693.1
GO:0047733 - CDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF027681.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF014409.2
COORDINATES: protein motif:HMM:NF015087.2
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
N-acetylneuraminate synthase family protein
COORDINATES: protein motif:HMM:TIGR01670.1
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF026247.2
COORDINATES: similar to AA sequence:RefSeq:WP_002679067.1
COORDINATES: protein motif:HMM:TIGR01479.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]; GO:0008905 - mannose-phosphate guanylyltransferase activity [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: protein motif:HMM:NF013234.2
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_015712482.1
COORDINATES: similar to AA sequence:RefSeq:WP_010263586.1
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: similar to AA sequence:RefSeq:WP_016525603.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701300.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694720.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF024915.2
COORDINATES: similar to AA sequence:RefSeq:WP_002701193.1
COORDINATES: protein motif:HMM:TIGR02012.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002696290.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_002696292.1
COORDINATES: similar to AA sequence:RefSeq:WP_002698331.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009104848.1
COORDINATES: similar to AA sequence:RefSeq:WP_006187969.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002700103.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:NF024572.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254645.1
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF013782.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017536.2
COORDINATES: protein motif:HMM:NF013395.2
COORDINATES: protein motif:HMM:NF012422.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016520457.1
COORDINATES: similar to AA sequence:RefSeq:WP_002685883.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519730.1
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: protein motif:HMM:NF019318.2
COORDINATES: similar to AA sequence:RefSeq:WP_002701407.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002677743.1
COORDINATES: protein motif:HMM:NF024758.2
COORDINATES: similar to AA sequence:RefSeq:WP_015711282.1
GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015711281.1
GO:0031224 - intrinsic component of membrane [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758143.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013702248.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: similar to AA sequence:RefSeq:WP_013702246.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_006189326.1
COORDINATES: similar to AA sequence:RefSeq:WP_016517819.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697734.1
COORDINATES: protein motif:HMM:NF014232.2
COORDINATES: protein motif:HMM:NF012443.2
COORDINATES: similar to AA sequence:RefSeq:WP_010695844.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010262206.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002683586.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024087.2
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF020397.2
COORDINATES: protein motif:HMM:NF012861.2
ClC family H(+)/Cl(-) exchange transporter
COORDINATES: similar to AA sequence:RefSeq:WP_013968611.1
COORDINATES: similar to AA sequence:RefSeq:WP_015709763.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012889.2
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: similar to AA sequence:RefSeq:WP_002669351.1
COORDINATES: protein motif:HMM:TIGR00621.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002706444.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758558.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020612321.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF025711.2
COORDINATES: similar to AA sequence:RefSeq:WP_006190262.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002695322.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968873.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523824.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013945235.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002667735.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701404.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519642.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758545.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016525408.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009106331.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006189367.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002701101.1
COORDINATES: protein motif:HMM:NF024212.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010697297.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019924.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014269762.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524113.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697327.1
COORDINATES: protein motif:HMM:NF014656.2
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019880.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
CHC2 zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF024755.2
COORDINATES: similar to AA sequence:RefSeq:WP_010699274.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758490.1
C4-type zinc ribbon domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_002699382.1
COORDINATES: similar to AA sequence:RefSeq:WP_013945138.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520060.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:NF016019.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968842.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258470.1
COORDINATES: protein motif:HMM:TIGR03960.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
TIGR03960 family B12-binding radical SAM protein
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF012738.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759025.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002693818.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968760.1
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02227.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758644.1
COORDINATES: protein motif:HMM:NF013468.2
GO:0003725 - double-stranded RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: similar to AA sequence:RefSeq:WP_002679668.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758504.1
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016519799.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020660.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015052.2
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:NF015100.2
RnfABCDGE type electron transport complex subunit D
COORDINATES: protein motif:HMM:NF024768.2
COORDINATES: similar to AA sequence:RefSeq:WP_016519992.1
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: similar to AA sequence:RefSeq:WP_016525322.1
COORDINATES: protein motif:HMM:NF024041.2
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: similar to AA sequence:RefSeq:WP_010697798.1
COORDINATES: protein motif:HMM:NF017743.2
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_006187676.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968723.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711482.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014454168.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968910.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015707834.1
COORDINATES: similar to AA sequence:RefSeq:WP_015707835.1
COORDINATES: similar to AA sequence:RefSeq:WP_002678004.1
COORDINATES: protein motif:HMM:NF016357.2
COORDINATES: similar to AA sequence:RefSeq:WP_002289773.1
COORDINATES: protein motif:HMM:NF039639.1
COORDINATES: protein motif:HMM:NF016852.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: similar to AA sequence:RefSeq:WP_002671371.1
GO:0050188 - phosphoenolpyruvate mutase activity [Evidence IEA]
GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519606.1
GO:0033980 - phosphonopyruvate decarboxylase activity [Evidence IEA]
GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002695535.1
GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
2-aminoethylphosphonate--pyruvate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_013968919.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968920.1
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016525276.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
undecaprenyl-phosphate galactose phosphotransferase WbaP
COORDINATES: similar to AA sequence:RefSeq:WP_016520390.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525141.1
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_010699068.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009107776.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013701469.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_016519501.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520394.1
COORDINATES: similar to AA sequence:RefSeq:WP_002693113.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013945522.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702190.1
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:NF020926.2
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: similar to AA sequence:RefSeq:WP_002698513.1
COORDINATES: similar to AA sequence:RefSeq:WP_002675254.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968888.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711325.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705413.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_015711320.1
(deoxy)nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_006187781.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF012981.2
COORDINATES: protein motif:HMM:NF016895.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968901.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525487.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523622.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein
COORDINATES: protein motif:HMM:NF014758.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013923.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: similar to AA sequence:RefSeq:WP_010695109.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_016525493.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_002669625.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_013968796.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_002698872.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002668962.1
COORDINATES: protein motif:HMM:TIGR01788.1
GO:0004351 - glutamate decarboxylase activity [Evidence IEA]
GO:0006540 - glutamate decarboxylation to succinate [Evidence IEA]
COORDINATES: protein motif:HMM:NF024910.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010259982.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259985.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated endonuclease Cas1c
COORDINATES: similar to AA sequence:RefSeq:WP_010259988.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016963.2
COORDINATES: protein motif:HMM:NF021240.2
COORDINATES: protein motif:HMM:TIGR02073.1
GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015707686.1
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518863.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701335.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF025608.2
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_016519646.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758389.1
COORDINATES: protein motif:HMM:NF015684.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758387.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_002700154.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010882330.1
COORDINATES: protein motif:HMM:NF018299.2
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006189164.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016522135.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010696705.1
COORDINATES: protein motif:HMM:NF011230.0
COORDINATES: similar to AA sequence:RefSeq:WP_002679418.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524031.1
flagellar filament outer layer protein FlaA
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518065.1
COORDINATES: protein motif:HMM:NF024880.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524036.1
COORDINATES: protein motif:HMM:TIGR04321.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002693121.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525160.1
COORDINATES: similar to AA sequence:RefSeq:WP_002668293.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968631.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701367.1
COORDINATES: protein motif:HMM:NF018884.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521480.1
This anti-anti-sigma factor, or anti-sigma factor antagonist, belongs to a family that includes characterized members SpoIIAA, RsbV, RsfA, and RsfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013701364.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758295.1
COORDINATES: similar to AA sequence:RefSeq:WP_002700909.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518109.1
late competence development ComFB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013969117.1
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015707657.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525698.1
COORDINATES: similar to AA sequence:RefSeq:WP_016517855.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013945056.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_016524169.1
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_013945054.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010881844.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758115.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_002668456.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006190098.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013969129.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525063.1
COORDINATES: similar to AA sequence:RefSeq:WP_006189865.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524264.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002668440.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014874.2
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: protein motif:HMM:NF013396.2
COORDINATES: similar to AA sequence:RefSeq:WP_002668438.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013969140.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_002695155.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_002668795.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522095.1
COORDINATES: similar to AA sequence:RefSeq:WP_013945275.1
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_016522923.1
COORDINATES: similar to AA sequence:RefSeq:WP_002668131.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522921.1
COORDINATES: protein motif:HMM:NF017786.2
COORDINATES: similar to AA sequence:RefSeq:WP_002698455.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525806.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758089.1
COORDINATES: protein motif:HMM:NF019245.2
COORDINATES: similar to AA sequence:RefSeq:WP_002683757.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013126.2
COORDINATES: similar to AA sequence:RefSeq:WP_016525814.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013758814.1
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
sodium-extruding oxaloacetate decarboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013968490.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968489.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711043.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258418.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520047.1
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: similar to AA sequence:RefSeq:WP_013739724.1
COORDINATES: similar to AA sequence:RefSeq:WP_002697732.1
COORDINATES: similar to AA sequence:RefSeq:WP_002697734.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269739.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606605.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758697.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518071.1
COORDINATES: similar to AA sequence:RefSeq:WP_002668974.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524041.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002689329.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF020772.2
COORDINATES: protein motif:HMM:NF027583.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF004976.0
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: protein motif:HMM:NF016144.2
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_002670205.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF015319.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757342.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010694832.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF025210.2
COORDINATES: similar to AA sequence:RefSeq:WP_015712790.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712454.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF017015.2
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013757437.1
COORDINATES: similar to AA sequence:RefSeq:WP_006187983.1
COORDINATES: similar to AA sequence:RefSeq:WP_006190143.1
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: similar to AA sequence:RefSeq:WP_010261465.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758226.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: protein motif:HMM:NF019194.2
COORDINATES: similar to AA sequence:RefSeq:WP_002670918.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757887.1
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_002700084.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]; GO:0035999 - tetrahydrofolate interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01297.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF024484.2
COORDINATES: similar to AA sequence:RefSeq:WP_020612541.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758204.1
peptidase domain-containing ABC transporter
COORDINATES: protein motif:HMM:NF027890.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF016873.2
COORDINATES: similar to AA sequence:RefSeq:WP_015712939.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014454955.1
COORDINATES: protein motif:HMM:NF013601.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_002701610.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025006.2
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF012893.2
COORDINATES: protein motif:HMM:NF013231.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015706313.1
COORDINATES: similar to AA sequence:RefSeq:WP_015706314.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_010254008.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255854.1
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002673747.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969651.1
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521261.1
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: similar to AA sequence:RefSeq:WP_002680241.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521619.1
COORDINATES: protein motif:HMM:NF019966.2
COORDINATES: similar to AA sequence:RefSeq:WP_016525117.1
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: protein motif:HMM:NF022635.2
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF019632.2
ClbS/DfsB family four-helix bundle protein
COORDINATES: protein motif:HMM:NF024913.2
COORDINATES: protein motif:HMM:NF021631.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF014628.2
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:NF025749.2
COORDINATES: similar to AA sequence:RefSeq:WP_008863800.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970141.1
COORDINATES: protein motif:HMM:NF012998.2
COORDINATES: protein motif:HMM:NF006421.0
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758414.1
GO:0004072 - aspartate kinase activity [Evidence IEA]; GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0009067 - aspartate family amino acid biosynthetic process [Evidence IEA]; GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]
bifunctional aspartate kinase/homoserine dehydrogenase I
COORDINATES: protein motif:HMM:NF015436.2
COORDINATES: similar to AA sequence:RefSeq:WP_016524784.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016522675.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010697483.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758821.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259684.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524789.1
GO:0016471 - vacuolar proton-transporting V-type ATPase complex [Evidence IEA]
GO:0008553 - P-type proton-exporting transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519705.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712165.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758827.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969248.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524795.1
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: similar to AA sequence:RefSeq:WP_002668509.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002689548.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524953.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697284.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_002689173.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102684.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002701497.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_002697373.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757985.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712193.1
COORDINATES: protein motif:HMM:NF019013.2
COORDINATES: similar to AA sequence:RefSeq:WP_015708565.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253214.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758022.1
COORDINATES: similar to AA sequence:RefSeq:WP_002695132.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015706947.1
COORDINATES: similar to AA sequence:RefSeq:WP_002673102.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759063.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015712464.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757933.1
COORDINATES: protein motif:HMM:NF014904.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: protein motif:HMM:NF036774.2
COORDINATES: protein motif:HMM:NF019000.2
host-nuclease inhibitor Gam family protein
COORDINATES: protein motif:HMM:NF015776.2
COORDINATES: similar to AA sequence:RefSeq:WP_010260741.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105532.1
COORDINATES: protein motif:HMM:NF024787.2
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000567888.1
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_002690286.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: protein motif:HMM:NF023295.2
COORDINATES: protein motif:HMM:NF019348.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021622.2
COORDINATES: protein motif:HMM:NF024769.2
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:NF024076.2
COORDINATES: similar to AA sequence:RefSeq:WP_013739180.1
COORDINATES: protein motif:HMM:NF037716.2
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: similar to AA sequence:RefSeq:WP_013739183.1
COORDINATES: protein motif:HMM:NF024094.2
COORDINATES: protein motif:HMM:NF015722.2
formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:NF025716.2
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:TIGR02872.1
GO:0030436 - asexual sporulation [Evidence IEA]
sporulation integral membrane protein YtvI
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF022654.2
COORDINATES: similar to AA sequence:RefSeq:WP_002685008.1
COORDINATES: protein motif:HMM:NF014664.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757311.1
COORDINATES: similar to AA sequence:RefSeq:WP_015710182.1
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:TIGR03916.1
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:TIGR03915.1
GO:0005575 - cellular_component [Evidence IEA]
TIGR03915 family putative DNA repair protein
COORDINATES: protein motif:HMM:NF024744.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: similar to AA sequence:RefSeq:WP_002687329.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039236.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: protein motif:HMM:NF014215.2
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF025636.2
COORDINATES: similar to AA sequence:RefSeq:WP_015710455.1
COORDINATES: protein motif:HMM:NF024984.2
COORDINATES: protein motif:HMM:NF005497.0
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside triphosphate reductase
COORDINATES: protein motif:HMM:NF019614.2
COORDINATES: protein motif:HMM:TIGR02491.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: protein motif:HMM:NF025009.2
SurA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010957093.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968259.1
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525656.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00154.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_006187873.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002678548.1
COORDINATES: protein motif:HMM:TIGR00488.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: protein motif:HMM:NF013621.2
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002669469.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758906.1
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_016522145.1
COORDINATES: similar to AA sequence:RefSeq:WP_010698958.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF036553.2
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968243.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010698008.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF016623.2
divergent polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013254384.1
COORDINATES: similar to AA sequence:RefSeq:WP_002666791.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002680921.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701129.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006189658.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: similar to AA sequence:RefSeq:WP_000415199.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757752.1
COORDINATES: protein motif:HMM:NF016724.2
COORDINATES: similar to AA sequence:RefSeq:WP_013700745.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_009105748.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:NF016232.2
putative DNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF017893.2
COORDINATES: protein motif:HMM:NF014899.2
class III extradiol dioxygenase subunit B-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR00296.1
COORDINATES: similar to AA sequence:RefSeq:WP_009107244.1
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009107239.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694237.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013757810.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105808.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524733.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF015587.2
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013740360.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003671.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF014806.2
COORDINATES: protein motif:HMM:NF009475.0
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
carbamoyl phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF013178.2
COORDINATES: similar to AA sequence:RefSeq:WP_015706876.1
COORDINATES: protein motif:HMM:NF014566.2
type II CAAX endopeptidase family protein
COORDINATES: protein motif:HMM:NF012348.2
COORDINATES: protein motif:HMM:NF015884.2
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
glutamine synthetase beta-grasp domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016522497.1
COORDINATES: protein motif:HMM:NF014375.2
GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog.; Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF005719.0
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009105447.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: similar to AA sequence:RefSeq:WP_013968468.1
COORDINATES: similar to AA sequence:RefSeq:WP_015710392.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_015706621.1
COORDINATES: similar to AA sequence:RefSeq:WP_014505623.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016526106.1
COORDINATES: protein motif:HMM:NF013308.2
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009103155.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969526.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614334.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002683123.1
COORDINATES: protein motif:HMM:NF021028.2
COORDINATES: similar to AA sequence:RefSeq:WP_010258627.1
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: protein motif:HMM:NF028237.2
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_003226803.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002704036.1
COORDINATES: protein motif:HMM:TIGR03598.1
COORDINATES: protein motif:HMM:NF014794.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014795.2
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010255846.1
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_006189649.1
COORDINATES: protein motif:HMM:NF013868.2
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013109.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969383.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016523267.1
COORDINATES: similar to AA sequence:RefSeq:WP_002698440.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010881754.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013256318.1
COORDINATES: similar to AA sequence:RefSeq:WP_010880011.1
COORDINATES: protein motif:HMM:NF015799.2
COORDINATES: similar to AA sequence:RefSeq:WP_016526104.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670325.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968385.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_016522623.1
COORDINATES: similar to AA sequence:RefSeq:WP_006187823.1
COORDINATES: protein motif:HMM:NF018649.2
COORDINATES: similar to AA sequence:RefSeq:WP_010694872.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002682102.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254997.1
COORDINATES: protein motif:HMM:NF033751.1
COORDINATES: similar to AA sequence:RefSeq:WP_010882199.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_018525286.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
GO:0035998 - 7,8-dihydroneopterin 3'-triphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757787.1
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:NF009881.0
COORDINATES: similar to AA sequence:RefSeq:WP_013701685.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010698310.1
tRNA-dihydrouridine synthase family protein
COORDINATES: protein motif:HMM:NF019438.2
COORDINATES: similar to AA sequence:RefSeq:WP_002671793.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611180.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:TIGR00318.1
COORDINATES: similar to AA sequence:RefSeq:WP_002677156.1
COORDINATES: protein motif:HMM:NF015000.2
glycerophosphodiester phosphodiesterase family protein
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: similar to AA sequence:RefSeq:WP_010956827.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694886.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670146.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521845.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702226.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757760.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106943.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757758.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524883.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757755.1
COORDINATES: protein motif:HMM:NF024929.2
COORDINATES: protein motif:HMM:NF000848.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_016518642.1
GO:0016829 - lyase activity [Evidence IEA]
septal ring lytic transglycosylase RlpA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010253466.1
COORDINATES: similar to AA sequence:RefSeq:WP_013945422.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103050.1
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_015710783.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524767.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_010882203.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525102.1
COORDINATES: similar to AA sequence:RefSeq:WP_002666802.1
COORDINATES: similar to AA sequence:RefSeq:WP_002673293.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002695397.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013702399.1
COORDINATES: similar to AA sequence:RefSeq:WP_002666766.1
COORDINATES: protein motif:HMM:NF013961.2
COORDINATES: similar to AA sequence:RefSeq:WP_002668261.1
COORDINATES: similar to AA sequence:RefSeq:WP_006189494.1
glucosaminidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002699885.1
COORDINATES: protein motif:HMM:NF013836.2
GO:0070569 - uridylyltransferase activity [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: similar to AA sequence:RefSeq:WP_016670505.1
COORDINATES: similar to AA sequence:RefSeq:WP_000219438.1
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002672276.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013179.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254288.1
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_018527746.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_018527745.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02138.1
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR02136.1
phosphate ABC transporter substrate-binding protein
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033832.1
COORDINATES: protein motif:HMM:NF033831.1
COORDINATES: protein motif:HMM:TIGR04085.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711564.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711567.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520616.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014801.2
COORDINATES: similar to AA sequence:RefSeq:WP_002703542.1
COORDINATES: protein motif:HMM:NF025380.2
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: similar to AA sequence:RefSeq:WP_016523431.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_001029884.1
COORDINATES: similar to AA sequence:RefSeq:WP_011228713.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188495.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_002705829.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524667.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697816.1
carbohydrate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_002666599.1
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_006187525.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF040322.1
COORDINATES: similar to AA sequence:RefSeq:WP_002672925.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969783.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523191.1
COORDINATES: protein motif:HMM:NF015050.2
COORDINATES: protein motif:HMM:TIGR01703.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711474.1
COORDINATES: similar to AA sequence:RefSeq:WP_010261555.1
COORDINATES: similar to AA sequence:RefSeq:WP_006190135.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_013759080.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523792.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_002698715.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_002685350.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_016524936.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757688.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
MiaB/RimO family radical SAM methylthiotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002691514.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524933.1
outer membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_013757661.1
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: similar to AA sequence:RefSeq:WP_014342657.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522124.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706070.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005362589.1
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:NF017757.2
COORDINATES: protein motif:HMM:NF025120.2
COORDINATES: protein motif:HMM:NF012307.2
COORDINATES: protein motif:HMM:NF024144.2
cadherin-like beta sandwich domain-containing protein
COORDINATES: protein motif:HMM:NF024702.2
leucine-rich repeat domain-containing protein
carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010956962.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518739.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_013605812.1
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: similar to AA sequence:RefSeq:WP_013759160.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522453.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758007.1
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_002692909.1
GO:0009055 - electron transfer activity [Evidence IEA]
RnfABCDGE type electron transport complex subunit A
COORDINATES: protein motif:HMM:NF009070.0
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_002672119.1
COORDINATES: similar to AA sequence:RefSeq:WP_002682097.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
gliding motility-associated C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002703811.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702047.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758047.1
outer membrane lipoprotein-sorting protein
COORDINATES: protein motif:HMM:TIGR00513.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006188002.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013969458.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969457.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_002681770.1
trans-2-enoyl-CoA reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013313645.1
COORDINATES: similar to AA sequence:RefSeq:WP_014625761.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010694539.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_010253736.1
COORDINATES: protein motif:HMM:NF012742.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012576.2
COORDINATES: similar to AA sequence:RefSeq:WP_013253304.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013606697.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259830.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269602.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009103930.1
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013969996.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002666928.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009104078.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021903.2
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015706796.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022744.2
COORDINATES: similar to AA sequence:RefSeq:WP_015706342.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702160.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002698526.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969359.1
COORDINATES: similar to AA sequence:RefSeq:WP_002677448.1
COORDINATES: protein motif:HMM:NF020084.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757834.1
magnesium transporter CorA family protein
COORDINATES: protein motif:HMM:NF013931.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010696556.1
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:NF014248.2
COORDINATES: similar to AA sequence:RefSeq:WP_004266444.1
penicillin-binding protein activator LpoB
COORDINATES: similar to AA sequence:RefSeq:WP_002700009.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758016.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:TIGR01784.1
Rpn family recombination-promoting nuclease/putative transposase
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015707081.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013608417.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF020036.2
COORDINATES: similar to AA sequence:RefSeq:WP_016522646.1
COORDINATES: protein motif:HMM:NF021529.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757699.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008376146.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969426.1
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701731.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102468.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702065.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704456.1
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress.; The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF027875.2
glycogen-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013608529.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608528.1
COORDINATES: similar to AA sequence:RefSeq:WP_015706531.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759329.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_016526284.1
COORDINATES: protein motif:HMM:NF013618.2
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:NF036901.2
COORDINATES: similar to AA sequence:RefSeq:WP_013944793.1
COORDINATES: similar to AA sequence:RefSeq:WP_002677971.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967720.1
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_010699638.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF025885.2
COORDINATES: similar to AA sequence:RefSeq:WP_002700578.1
COORDINATES: similar to AA sequence:RefSeq:WP_010254341.1
COORDINATES: similar to AA sequence:RefSeq:WP_002688237.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002682733.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_013967728.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002701435.1
COORDINATES: similar to AA sequence:RefSeq:WP_002692920.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000516114.1
COORDINATES: similar to AA sequence:RefSeq:WP_002700567.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF024490.2
COORDINATES: protein motif:HMM:NF014553.2
COORDINATES: protein motif:HMM:NF024489.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969967.1
COORDINATES: similar to AA sequence:RefSeq:WP_002693107.1
COORDINATES: protein motif:HMM:NF014930.2
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_016522877.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757478.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706044.1
COORDINATES: similar to AA sequence:RefSeq:WP_010254536.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
alpha/beta hydrolase fold domain-containing protein
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF014647.2
COORDINATES: similar to AA sequence:RefSeq:WP_013702261.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]; GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015706833.1
GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO:0015824 - proline transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF024273.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520357.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757653.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013969929.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014856.2
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013738944.1
COORDINATES: similar to AA sequence:RefSeq:WP_002699099.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969509.1
COORDINATES: similar to AA sequence:RefSeq:WP_002668086.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_002671740.1
GO:0015293 - symporter activity [Evidence IEA]
cation:dicarboxylase symporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_013759426.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759618.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: similar to AA sequence:RefSeq:WP_006188484.1
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_002670474.1
RNA-binding transcriptional accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_013759228.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018271.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757850.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188125.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757848.1
maltose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013757846.1
COORDINATES: similar to AA sequence:RefSeq:WP_002698491.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006189068.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757911.1
COORDINATES: protein motif:HMM:NF033749.1
COORDINATES: protein motif:HMM:NF013703.2
COORDINATES: similar to AA sequence:RefSeq:WP_016522996.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525559.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700876.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_002674354.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:TIGR00040.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002688769.1
COORDINATES: protein motif:HMM:NF014173.2
COORDINATES: protein motif:HMM:NF020243.2
COORDINATES: protein motif:HMM:NF021535.2
COORDINATES: protein motif:HMM:NF039533.1
COORDINATES: similar to AA sequence:RefSeq:WP_015710272.1
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: protein motif:HMM:NF003163.0
COORDINATES: protein motif:HMM:NF027567.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF014228.2
Sir2 silent information regulator family NAD-dependent deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_010698781.1
COORDINATES: similar to AA sequence:RefSeq:WP_010256822.1
COORDINATES: protein motif:HMM:NF024135.2
COORDINATES: similar to AA sequence:RefSeq:WP_014269401.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606838.1
COORDINATES: similar to AA sequence:RefSeq:WP_002678328.1
COORDINATES: protein motif:HMM:NF017076.2
COORDINATES: similar to AA sequence:RefSeq:WP_010692366.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF006968.0
COORDINATES: protein motif:HMM:NF012437.2
COORDINATES: similar to AA sequence:RefSeq:WP_002697946.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254781.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613996.1
COORDINATES: similar to AA sequence:RefSeq:WP_015709523.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF020496.2
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:NF019976.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF014414.2
COORDINATES: protein motif:HMM:NF040368.1
nuclease-related domain-containing protein
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF025637.2
COORDINATES: protein motif:HMM:NF013964.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025388.2
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:NF025056.2
toll/interleukin-1 receptor domain-containing protein
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518544.1
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF020052.2
COORDINATES: similar to AA sequence:RefSeq:WP_006189229.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025638.2
COORDINATES: similar to AA sequence:RefSeq:WP_016512144.1
COORDINATES: protein motif:HMM:TIGR04474.1
COORDINATES: protein motif:HMM:NF019416.2
COORDINATES: protein motif:HMM:NF019151.2
COORDINATES: similar to AA sequence:RefSeq:WP_016523971.1
COORDINATES: similar to AA sequence:RefSeq:WP_010256572.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757675.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520639.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_002696164.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: similar to AA sequence:RefSeq:WP_002700914.1
COORDINATES: protein motif:HMM:NF024183.2
COORDINATES: similar to AA sequence:RefSeq:WP_002700233.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_010698326.1
COORDINATES: protein motif:HMM:TIGR01254.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]; GO:0030975 - thiamine binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0030974 - thiamine pyrophosphate transmembrane transport [Evidence IEA]; GO:0015888 - thiamine transport [Evidence IEA]
thiamine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013759180.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757879.1
COORDINATES: similar to AA sequence:RefSeq:WP_002672366.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF015901.2
COORDINATES: similar to AA sequence:RefSeq:WP_014456685.1
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_010698690.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013970144.1
COORDINATES: similar to AA sequence:RefSeq:WP_016517892.1
COORDINATES: similar to AA sequence:RefSeq:WP_010699400.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757885.1
COORDINATES: protein motif:HMM:NF018000.2
COORDINATES: protein motif:HMM:NF014437.2
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014009.2
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014689.2
manganese efflux pump MntP family protein
COORDINATES: protein motif:HMM:NF018651.2
COORDINATES: protein motif:HMM:NF037048.2
COORDINATES: protein motif:HMM:TIGR03918.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF
COORDINATES: similar to AA sequence:RefSeq:WP_009104522.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: similar to AA sequence:RefSeq:WP_013255528.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020611293.1
COORDINATES: similar to AA sequence:RefSeq:WP_002692791.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: protein motif:HMM:TIGR00586.1
GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002701782.1
COORDINATES: similar to AA sequence:RefSeq:WP_002695102.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702992.1
COORDINATES: protein motif:HMM:NF020804.2
COORDINATES: similar to AA sequence:RefSeq:WP_016524379.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522300.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: similar to AA sequence:RefSeq:WP_016524964.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611523.1
COORDINATES: similar to AA sequence:RefSeq:WP_001995633.1
COORDINATES: protein motif:HMM:NF005389.0
COORDINATES: protein motif:HMM:NF024674.2
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF014066.2
COORDINATES: protein motif:HMM:NF038403.1
permease prefix domain 1-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015711953.1
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: similar to AA sequence:RefSeq:WP_013313438.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970159.1
COORDINATES: protein motif:HMM:NF025059.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF024570.2
COORDINATES: protein motif:HMM:NF013222.2
COORDINATES: similar to AA sequence:RefSeq:WP_005377116.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_014271494.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271493.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271492.1
COORDINATES: protein motif:HMM:NF024055.2
COORDINATES: protein motif:HMM:NF020476.2
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF012703.2
COORDINATES: protein motif:HMM:NF026018.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_016518584.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_004398583.1
COORDINATES: protein motif:HMM:NF024704.2
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: similar to AA sequence:RefSeq:WP_013700768.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF015060.2
COORDINATES: similar to AA sequence:RefSeq:WP_010694712.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_020613993.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613992.1
COORDINATES: similar to AA sequence:RefSeq:WP_002669936.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520001.1
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013969493.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_013757515.1
isoamylase early set domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006188497.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014454624.1
GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_010257182.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759434.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: protein motif:HMM:NF018506.2
COORDINATES: similar to AA sequence:RefSeq:WP_013253134.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757776.1
COORDINATES: protein motif:HMM:NF012531.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01317.1
COORDINATES: similar to AA sequence:RefSeq:WP_015713079.1
COORDINATES: similar to AA sequence:RefSeq:WP_015713078.1
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: similar to AA sequence:RefSeq:WP_015707515.1
COORDINATES: protein motif:HMM:NF013989.2
COORDINATES: protein motif:HMM:NF013775.2
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013739406.1
COORDINATES: protein motif:HMM:NF023524.2
COORDINATES: similar to AA sequence:RefSeq:WP_002672675.1
type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family
COORDINATES: similar to AA sequence:RefSeq:WP_014454564.1
COORDINATES: protein motif:HMM:NF011702.0
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00380
The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF016932.2
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF014477.2
COORDINATES: protein motif:HMM:NF018595.2
GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA]
CDGSH iron-sulfur domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002689967.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014345.2
carcinine hydrolase/isopenicillin-N N-acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015707213.1
bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH
COORDINATES: similar to AA sequence:RefSeq:WP_015707334.1
COORDINATES: protein motif:HMM:NF016206.2
COORDINATES: similar to AA sequence:RefSeq:WP_002683753.1
COORDINATES: protein motif:HMM:NF019346.2
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF014430.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF013698.2
COORDINATES: similar to AA sequence:RefSeq:WP_002682968.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:TIGR03696.1
COORDINATES: protein motif:HMM:NF015497.2
SpvB/TcaC N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010695164.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013967680.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757189.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524347.1
COORDINATES: similar to AA sequence:RefSeq:WP_015709908.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_002696619.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011772387.1
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: protein motif:HMM:TIGR00611.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.; All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_002666474.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010694512.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_002673402.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_002695665.1
GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit A
COORDINATES: protein motif:HMM:NF017090.2
COORDINATES: similar to AA sequence:RefSeq:WP_002690296.1
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF017984.2
winged helix DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF025675.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_015713002.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014068.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024911.2
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:NF013412.2
COORDINATES: similar to AA sequence:RefSeq:WP_010746436.1
COORDINATES: protein motif:HMM:NF018180.2
COORDINATES: protein motif:HMM:NF024813.2
COORDINATES: protein motif:HMM:NF013932.2
COORDINATES: protein motif:HMM:NF015807.2
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013254952.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759275.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521675.1
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:NF024863.2
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF015763.2
COORDINATES: similar to AA sequence:RefSeq:WP_016526332.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606425.1
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521289.1
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002676384.1
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013759454.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:NF015822.2
COORDINATES: similar to AA sequence:RefSeq:WP_016523284.1
COORDINATES: similar to AA sequence:RefSeq:WP_002676225.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702628.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759441.1
COORDINATES: similar to AA sequence:RefSeq:WP_002695067.1
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_013759437.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010699669.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002668860.1
COORDINATES: protein motif:HMM:TIGR03592.1
COORDINATES: similar to AA sequence:RefSeq:WP_013739828.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455644.1
COORDINATES: similar to AA sequence:RefSeq:WP_002687350.1
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257311.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002680234.1
COORDINATES: similar to AA sequence:RefSeq:WP_015706861.1
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: protein motif:HMM:NF012739.2
COORDINATES: similar to AA sequence:RefSeq:WP_013700479.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524494.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519448.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_010258385.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702510.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712433.1
transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:NF017183.2
COORDINATES: similar to AA sequence:RefSeq:WP_009105901.1
COORDINATES: similar to AA sequence:RefSeq:WP_015709332.1
COORDINATES: protein motif:HMM:NF019339.2
COORDINATES: similar to AA sequence:RefSeq:WP_006189095.1
COORDINATES: protein motif:HMM:NF013702.2
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016526357.1
COORDINATES: protein motif:HMM:NF024081.2
FeoB-associated Cys-rich membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_002692793.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002691409.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009102563.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520905.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270989.1
COORDINATES: protein motif:HMM:NF025879.2
effector binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014654251.1
COORDINATES: protein motif:HMM:NF022641.2
COORDINATES: similar to AA sequence:RefSeq:WP_010260944.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013759690.1
GO:0004042 - acetyl-CoA:L-glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290713.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757832.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF014708.2
COORDINATES: protein motif:HMM:NF014871.2
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02254.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
YjjG family noncanonical pyrimidine nucleotidase
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: similar to AA sequence:RefSeq:WP_002669676.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: similar to AA sequence:RefSeq:WP_010255742.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519891.1
dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015711899.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104756.1
COORDINATES: protein motif:HMM:NF012377.2
B12-binding domain-containing radical SAM protein
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:TIGR03284.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: protein motif:HMM:NF015669.2
COORDINATES: similar to AA sequence:RefSeq:WP_016526333.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757398.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270575.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014505470.1
COORDINATES: protein motif:HMM:NF019099.2
COORDINATES: similar to AA sequence:RefSeq:WP_015706705.1
COORDINATES: similar to AA sequence:RefSeq:WP_010256588.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757663.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697901.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704260.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_006189974.1
COORDINATES: protein motif:HMM:NF022427.2
COORDINATES: similar to AA sequence:RefSeq:WP_002703757.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF037015.2
COORDINATES: protein motif:HMM:NF024878.2
COORDINATES: protein motif:HMM:NF004684.0
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002687662.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_013702343.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759519.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526299.1
GO:0004177 - aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759485.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013759486.1
COORDINATES: similar to AA sequence:RefSeq:WP_002700081.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702648.1
COORDINATES: similar to AA sequence:RefSeq:WP_002676681.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:TIGR03798.1
Nif11-like leader peptide family natural product precursor
COORDINATES: similar to AA sequence:RefSeq:WP_002696945.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694675.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525829.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758567.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758565.1
COORDINATES: protein motif:HMM:TIGR01490.1
COORDINATES: similar to AA sequence:RefSeq:WP_016517950.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758563.1
COORDINATES: protein motif:HMM:NF013384.2
COORDINATES: similar to AA sequence:RefSeq:WP_016525768.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015706761.1
COORDINATES: similar to AA sequence:RefSeq:WP_015709033.1
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015706909.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711507.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711508.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257787.1
COORDINATES: similar to AA sequence:RefSeq:WP_006190157.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016523894.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708439.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012686.2
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015708028.1
COORDINATES: protein motif:HMM:NF020028.2
COORDINATES: protein motif:HMM:NF013591.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968719.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF025888.2
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF033674.1
NirD/YgiW/YdeI family stress tolerance protein
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF019884.2
COORDINATES: protein motif:HMM:NF012722.2
COORDINATES: similar to AA sequence:RefSeq:WP_010260596.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013702643.1
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_013759471.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: similar to AA sequence:RefSeq:WP_016520560.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524503.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024626.2
COORDINATES: similar to AA sequence:RefSeq:WP_002700214.1
COORDINATES: similar to AA sequence:RefSeq:WP_014456392.1
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: similar to AA sequence:RefSeq:WP_018527060.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968263.1
COORDINATES: protein motif:HMM:NF013867.2
COORDINATES: similar to AA sequence:RefSeq:WP_014455905.1
COORDINATES: similar to AA sequence:RefSeq:WP_014456438.1
COORDINATES: protein motif:HMM:NF015908.2
COORDINATES: similar to AA sequence:RefSeq:WP_016524608.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_016518303.1
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: protein motif:HMM:NF016028.2
COORDINATES: similar to AA sequence:RefSeq:WP_016518371.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF023218.2
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015707495.1
COORDINATES: similar to AA sequence:RefSeq:WP_015706580.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01909.1
COORDINATES: similar to AA sequence:RefSeq:WP_015710903.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF016177.2
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002676722.1
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_013758917.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757484.1
COORDINATES: similar to AA sequence:RefSeq:WP_018527528.1
COORDINATES: similar to AA sequence:RefSeq:WP_015710429.1
COORDINATES: similar to AA sequence:RefSeq:WP_010698915.1
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: similar to AA sequence:RefSeq:WP_013607984.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_015712315.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757498.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020614052.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_015706708.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_010261599.1
COORDINATES: similar to AA sequence:RefSeq:WP_010255850.1
COORDINATES: protein motif:HMM:NF014805.2
COORDINATES: protein motif:HMM:NF021540.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF016087.2
COORDINATES: protein motif:HMM:NF017770.2
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_013759482.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694577.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_016523176.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702628.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002700613.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF025038.2
COORDINATES: similar to AA sequence:RefSeq:WP_016524441.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702632.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522908.1
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: similar to AA sequence:RefSeq:WP_015709701.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002673097.1
COORDINATES: similar to AA sequence:RefSeq:WP_024752187.1
COORDINATES: similar to AA sequence:RefSeq:WP_006190236.1
COORDINATES: similar to AA sequence:RefSeq:WP_002696752.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_013759524.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701558.1
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: protein motif:HMM:NF025161.2
COORDINATES: protein motif:HMM:NF033078.2
AAC(6')-Ia family aminoglycoside 6'-N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013606419.1
COORDINATES: protein motif:HMM:NF021474.2
COORDINATES: protein motif:HMM:NF019146.2
COORDINATES: protein motif:HMM:NF014902.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
alpha amylase N-terminal ig-like domain-containing protein
COORDINATES: protein motif:HMM:NF017964.2
COORDINATES: similar to AA sequence:RefSeq:WP_015711855.1
GH3 auxin-responsive promoter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013969878.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010260860.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015629.2
COORDINATES: protein motif:HMM:TIGR03546.1
COORDINATES: protein motif:HMM:TIGR03545.1
COORDINATES: protein motif:HMM:NF014499.2
COORDINATES: similar to AA sequence:RefSeq:WP_004266513.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522790.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759350.1
COORDINATES: protein motif:HMM:NF015889.2
COORDINATES: similar to AA sequence:RefSeq:WP_016518834.1
phosphatidylglycerol lysyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016526275.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010698679.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016522367.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759626.1
COORDINATES: similar to AA sequence:RefSeq:WP_005816203.1
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:NF024760.2
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF036965.2
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: similar to AA sequence:RefSeq:WP_016523627.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006189507.1
COORDINATES: protein motif:HMM:NF019585.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521012.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF012485.2
type II and III secretion system protein
COORDINATES: protein motif:HMM:NF023677.2
COORDINATES: protein motif:HMM:TIGR01643.1
COORDINATES: protein motif:HMM:NF020961.2
COORDINATES: similar to AA sequence:RefSeq:WP_013606437.1
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: similar to AA sequence:RefSeq:WP_015709248.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712205.1
COORDINATES: protein motif:HMM:NF024967.2
COORDINATES: protein motif:HMM:NF013446.2
GO:0004175 - endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518781.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011071245.1
COORDINATES: protein motif:HMM:NF015659.2
COORDINATES: protein motif:HMM:NF024231.2
COORDINATES: similar to AA sequence:RefSeq:WP_010881564.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF014420.2
COORDINATES: similar to AA sequence:RefSeq:WP_013252662.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104389.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757210.1
COORDINATES: similar to AA sequence:RefSeq:WP_013945488.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002699784.1
DbpA RNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002677391.1
COORDINATES: similar to AA sequence:RefSeq:WP_002693066.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
carboxypeptidase regulatory-like domain-containing protein
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010259480.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259478.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259476.1
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF016283.2
COORDINATES: similar to AA sequence:RefSeq:WP_015707594.1
COORDINATES: protein motif:HMM:NF020904.2
COORDINATES: similar to AA sequence:RefSeq:WP_013740117.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255826.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526578.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702653.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010694416.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293058.1
COORDINATES: similar to AA sequence:RefSeq:WP_018525631.1
GO:0047334 - diphosphate-fructose-6-phosphate 1-phosphotransferase activity [Evidence IEA]
diphosphate--fructose-6-phosphate 1-phosphotransferase
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF024788.2
PLDc N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:TIGR01525.1
COORDINATES: protein motif:HMM:NF012621.2
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009104251.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_013757814.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_016520464.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015706553.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_016520466.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:NF015951.2
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_014456280.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271070.1
COORDINATES: protein motif:HMM:NF012400.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969694.1
COORDINATES: protein motif:HMM:NF014021.2
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_013757616.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188880.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522474.1
COORDINATES: protein motif:HMM:NF017444.2
COORDINATES: similar to AA sequence:RefSeq:WP_010257218.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758258.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002680884.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968310.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002699585.1
COORDINATES: protein motif:HMM:NF014019.2
heavy metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024898.2
COORDINATES: similar to AA sequence:RefSeq:WP_013759301.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015712760.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015706325.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519528.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010697411.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015734.2
COORDINATES: similar to AA sequence:RefSeq:WP_002700800.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:TIGR01352.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291696.1
COORDINATES: protein motif:HMM:NF024743.2
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: similar to AA sequence:RefSeq:WP_002689072.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519244.1
COORDINATES: protein motif:HMM:NF025717.2
COORDINATES: protein motif:HMM:NF017572.2
COORDINATES: protein motif:HMM:NF015321.2
COORDINATES: protein motif:HMM:NF016732.2
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF016471.2
GO:0008233 - peptidase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016923.2
COORDINATES: protein motif:HMM:NF039819.1
COORDINATES: protein motif:HMM:TIGR01593.1
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: protein motif:HMM:TIGR01515.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014822.2
COORDINATES: similar to AA sequence:RefSeq:WP_000848659.1
aspartate/glutamate racemase family protein
COORDINATES: protein motif:HMM:NF020922.2
COORDINATES: similar to AA sequence:RefSeq:WP_010965865.1
COORDINATES: similar to AA sequence:RefSeq:WP_002697730.1
COORDINATES: protein motif:HMM:NF015724.2
COORDINATES: similar to AA sequence:RefSeq:WP_015711125.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014271367.1
An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013969339.1
COORDINATES: protein motif:HMM:TIGR01845.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF012335.2
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: similar to AA sequence:RefSeq:WP_013759206.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607424.1
COORDINATES: similar to AA sequence:RefSeq:WP_016670456.1
COORDINATES: similar to AA sequence:RefSeq:WP_002684175.1
COORDINATES: similar to AA sequence:RefSeq:WP_010696532.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259457.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010698044.1
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: similar to AA sequence:RefSeq:WP_015706702.1
COORDINATES: protein motif:HMM:NF018663.2
COORDINATES: protein motif:HMM:NF017809.2
COORDINATES: protein motif:HMM:NF014870.2
COORDINATES: protein motif:HMM:TIGR00589.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757998.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697969.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759417.1
COORDINATES: similar to AA sequence:RefSeq:WP_010695131.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_010695132.1
COORDINATES: similar to AA sequence:RefSeq:WP_002675888.1
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002667605.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759411.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_016524630.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_012538144.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944921.1
COORDINATES: similar to AA sequence:RefSeq:WP_002669993.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967860.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006188370.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103801.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759403.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881639.1
COORDINATES: similar to AA sequence:RefSeq:WP_000124453.1
COORDINATES: similar to AA sequence:RefSeq:WP_010956815.1
COORDINATES: similar to AA sequence:RefSeq:WP_002700880.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670003.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522590.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702559.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881646.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526190.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881648.1
COORDINATES: similar to AA sequence:RefSeq:WP_002557082.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881650.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694744.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000628816.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881653.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708611.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522585.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188390.1
COORDINATES: similar to AA sequence:RefSeq:WP_005487032.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881658.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002670039.1
COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016522583.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_016520664.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006188395.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759377.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259743.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_016521794.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701154.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708946.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759372.1
COORDINATES: similar to AA sequence:RefSeq:WP_006187508.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523842.1
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016524477.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521270.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614090.1
COORDINATES: similar to AA sequence:RefSeq:WP_002697161.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703697.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697785.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: similar to AA sequence:RefSeq:WP_015707421.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: similar to AA sequence:RefSeq:WP_020613042.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670719.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016520900.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006188461.1
COORDINATES: similar to AA sequence:RefSeq:WP_002666936.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103958.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF014443.2
COORDINATES: similar to AA sequence:RefSeq:WP_002699648.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526239.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518705.1
COORDINATES: similar to AA sequence:RefSeq:WP_010882212.1
COORDINATES: protein motif:HMM:NF013301.2
COORDINATES: similar to AA sequence:RefSeq:WP_010699503.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016517809.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009106241.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970105.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521122.1
HPF/RaiA family ribosome-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_016526099.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759248.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519594.1
COORDINATES: protein motif:HMM:NF025418.2
COORDINATES: similar to AA sequence:RefSeq:WP_016526397.1
COORDINATES: protein motif:HMM:NF024777.2
fibronectin type III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013970098.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970097.1
COORDINATES: protein motif:HMM:NF019507.2
COORDINATES: similar to AA sequence:RefSeq:WP_015710390.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704321.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_002706601.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002695775.1
COORDINATES: protein motif:HMM:NF020337.2
COORDINATES: protein motif:HMM:TIGR00126.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758474.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520187.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002694863.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254900.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254901.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104305.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254035.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757935.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518604.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522851.1
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002696110.1
COORDINATES: protein motif:HMM:NF015387.2
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016522781.1
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758041.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700857.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701214.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704836.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759064.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704883.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0006102 - isocitrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013968033.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015084.2
COORDINATES: protein motif:HMM:NF039198.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255845.1
COORDINATES: similar to AA sequence:RefSeq:WP_002684625.1
COORDINATES: protein motif:HMM:NF014325.2
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF036878.2
COORDINATES: protein motif:HMM:NF019559.2
COORDINATES: protein motif:HMM:NF013490.2
COORDINATES: similar to AA sequence:RefSeq:WP_020610834.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524957.1
COORDINATES: similar to AA sequence:RefSeq:WP_002699433.1
COORDINATES: similar to AA sequence:RefSeq:WP_002676480.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518724.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_009104810.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525729.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015708830.1
COORDINATES: similar to AA sequence:RefSeq:WP_002668053.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015708533.1
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002670897.1
COORDINATES: similar to AA sequence:RefSeq:WP_012460541.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758872.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703780.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701291.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_002666863.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004266524.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF021361.2
COORDINATES: protein motif:HMM:NF024299.2
COORDINATES: protein motif:HMM:NF024820.2
COORDINATES: protein motif:HMM:NF025559.2
L-2-amino-thiazoline-4-carboxylic acid hydrolase
COORDINATES: protein motif:HMM:NF028441.2
COORDINATES: similar to AA sequence:RefSeq:WP_015706466.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013256434.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_013256436.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611788.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969637.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757552.1
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: similar to AA sequence:RefSeq:WP_002696478.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF014860.2
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:NF025620.2
COORDINATES: similar to AA sequence:RefSeq:WP_010695855.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519942.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518085.1
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_002700122.1
TRAP transporter TatT component family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758615.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970029.1
COORDINATES: similar to AA sequence:RefSeq:WP_002676151.1
COORDINATES: protein motif:HMM:NF014082.2
COORDINATES: protein motif:HMM:NF020034.2
COORDINATES: protein motif:HMM:NF024304.2
COORDINATES: protein motif:HMM:NF021606.2
COORDINATES: similar to AA sequence:RefSeq:WP_006189048.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758662.1
COORDINATES: protein motif:HMM:NF024957.2
COORDINATES: similar to AA sequence:RefSeq:WP_015573757.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
iron-sulfur cluster assembly scaffold protein
COORDINATES: similar to AA sequence:RefSeq:WP_013969745.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF024084.2
COORDINATES: similar to AA sequence:RefSeq:WP_010882368.1
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968614.1
COORDINATES: similar to AA sequence:RefSeq:WP_002698960.1
COORDINATES: similar to AA sequence:RefSeq:WP_002698961.1
COORDINATES: similar to AA sequence:RefSeq:WP_009107051.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523028.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758788.1
COORDINATES: protein motif:HMM:NF012700.2
COORDINATES: protein motif:HMM:NF015894.2
COORDINATES: similar to AA sequence:RefSeq:WP_010261157.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758943.1
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521871.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106886.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_013968350.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701177.1
GO:0008483 - transaminase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
acetylornithine/succinylornithine family transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_013758413.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002667902.1
COORDINATES: similar to AA sequence:RefSeq:WP_002698856.1
COORDINATES: protein motif:HMM:NF014427.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969546.1
COORDINATES: protein motif:HMM:NF017946.2
COORDINATES: similar to AA sequence:RefSeq:WP_016524737.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF019491.2
COORDINATES: protein motif:HMM:TIGR02720.1
GO:0047112 - pyruvate oxidase activity [Evidence IEA]
GO:0009444 - pyruvate oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758134.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758135.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606616.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670213.1
COORDINATES: similar to AA sequence:RefSeq:WP_010692353.1
COORDINATES: protein motif:HMM:NF013907.2
COORDINATES: similar to AA sequence:RefSeq:WP_015707107.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_016523574.1
COORDINATES: similar to AA sequence:RefSeq:WP_002667815.1
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: similar to AA sequence:RefSeq:WP_016518216.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758066.1
COORDINATES: similar to AA sequence:RefSeq:WP_010882454.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006188144.1
GO:0004367 - glycerol-3-phosphate dehydrogenase [NAD+] activity [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_002696251.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013256750.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01850.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_016524472.1
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002698252.1
COORDINATES: protein motif:HMM:NF010584.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017873.2
COORDINATES: similar to AA sequence:RefSeq:WP_010260937.1
COORDINATES: protein motif:HMM:NF019161.2
bacterial Ig-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002671939.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518146.1
elongation factor P--(R)-beta-lysine ligase
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: similar to AA sequence:RefSeq:WP_002690148.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF019365.2
COORDINATES: similar to AA sequence:RefSeq:WP_002692451.1
tRNA 2-thiocytidine biosynthesis TtcA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013701248.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010882073.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522393.1
GO:0004527 - exonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010253304.1
COORDINATES: similar to AA sequence:RefSeq:WP_010253306.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712809.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455663.1
COORDINATES: protein motif:HMM:NF024686.2
chitobiase/beta-hexosaminidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015707429.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002699726.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697372.1
COORDINATES: similar to AA sequence:RefSeq:WP_010699449.1
COORDINATES: similar to AA sequence:RefSeq:WP_002699721.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524971.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259601.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259598.1
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: similar to AA sequence:RefSeq:WP_013970050.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757991.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013606634.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010870790.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016525858.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757913.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757914.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002678888.1
COORDINATES: protein motif:HMM:NF016218.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757915.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040920.1
CD1871A family CXXC motif-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521442.1
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_015707504.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013758794.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519130.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701788.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257980.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_009105671.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010254147.1
COORDINATES: similar to AA sequence:RefSeq:WP_015706245.1
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968403.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524193.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:NF037864.2
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012975.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758817.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009104631.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013758230.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009104429.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_013701836.1
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: similar to AA sequence:RefSeq:WP_016517992.1
COORDINATES: protein motif:HMM:NF021981.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968652.1
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758172.1
COORDINATES: similar to AA sequence:RefSeq:WP_015707679.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_010259165.1
COORDINATES: similar to AA sequence:RefSeq:WP_002690446.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016517936.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520424.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_002688860.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014342598.1
COORDINATES: similar to AA sequence:RefSeq:WP_016517939.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020610765.1
COORDINATES: similar to AA sequence:RefSeq:WP_002673846.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002675950.1
COORDINATES: protein motif:HMM:NF012493.2
C-terminal helicase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010956987.1
COORDINATES: similar to AA sequence:RefSeq:WP_002679368.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_013313389.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_013701492.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013345.2
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: protein motif:HMM:NF016292.2
ABC transporter substrate binding protein
COORDINATES: protein motif:HMM:TIGR00467.1
COORDINATES: protein motif:HMM:NF020700.2
COORDINATES: similar to AA sequence:RefSeq:WP_010258768.1
COORDINATES: similar to AA sequence:RefSeq:WP_015709929.1
COORDINATES: similar to AA sequence:RefSeq:WP_002688407.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006188990.1
COORDINATES: similar to AA sequence:RefSeq:WP_002688405.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524808.1
GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03725.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_013758678.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF005188.0
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: similar to AA sequence:RefSeq:WP_010882313.1
COORDINATES: similar to AA sequence:RefSeq:WP_010261484.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_016523232.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_015708724.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757867.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757870.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523579.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524716.1
COORDINATES: similar to AA sequence:RefSeq:WP_002682623.1
energy-coupling factor transporter transmembrane protein EcfT
COORDINATES: protein motif:HMM:NF014669.2
GO:0015225 - biotin transmembrane transporter activity [Evidence IEA]
GO:0015878 - biotin transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016517786.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188186.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524750.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002674337.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524752.1
COORDINATES: similar to AA sequence:RefSeq:WP_010692295.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002670701.1