Arsenophonus apicola strain ArsBeeUS plasmid pArsBee5, complete sequence.
type: Entry
definition: Arsenophonus apicola strain ArsBeeUS plasmid pArsBee5, complete sequence.
sequence version: NZ_CP084227.1
sequence date: 2022-09-04
sequence: sequence
division: CON
label: NZ_CP084227.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN21873137
keyword: RefSeq
source: Arsenophonus apicola
organism: Arsenophonus apicola
taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Morganellaceae; Arsenophonus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP084227.1.\nBacteria and source DNA available from Pol Nadal Jimenez, Institute\nof Infection, Veterinary and Ecological Sciences, University of\nLiverpool, Ic2 Liverpool Science Park, 146 Brownlow Hill,\nLiverpool, L3 5RF, UK.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Flye v. 2.8; Pilon v. 1.23\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 49.6x\nSequencing Technology :: Oxford Nanopore MinION; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/04/2022 11:51:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,553\nCDSs (total) :: 3,453\nGenes (coding) :: 3,222\nCDSs (with protein) :: 3,222\nGenes (RNA) :: 100\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 8\nPseudo Genes (total) :: 231\nCDSs (without protein) :: 231\nPseudo Genes (ambiguous residues) :: 0 of 231\nPseudo Genes (frameshifted) :: 136 of 231\nPseudo Genes (incomplete) :: 66 of 231\nPseudo Genes (internal stop) :: 64 of 231\nPseudo Genes (multiple problems) :: 33 of 231\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 49653
topology: circular
so has quality: SO_0000988
location: 1..49653
location: region:1-49653:1
RO_0002162: 2879119

NZ_CP084227
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN21873137
type: BioSample
SIO_000068: biosample

1
title: Culture and genomic analysis of Arsenophonus apicola sp. nov. isolated from the honeybee Apis mellifera
author: Nadal-Jimenez, P.
author: Siozios, S.
author: Frost, C.L.
author: Court, R.
author: Chrostek, E.
author: Drew, G.C.
author: Evans, J.D.
author: Hawthorne, D.J.
author: Burritt, J.B.
author: Hurst, G.D.D.
journal: Unpublished

2
title: Direct Submission
author: Siozios, S.
author: Frost, C.L.
author: Nadal-Jimenez, P.
author: Burritt, J.B.
author: Hurst, G.D.D.
journal: Submitted (27-SEP-2021) Evolution, Ecology and Behaviour, University of Liverpool, Crown Street, Biosciences building, Liverpool L69 7ZB, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49653:1
position: 49653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-49653:1:source
so part of: sequence
organism: Arsenophonus apicola
mol type: genomic DNA
strain: ArsBeeUS
isolation source: hemolymph
host: Apis mellifera
type material: type strain of Arsenophonus apicola
plasmid: pArsBee5
country: USA: Dunn County Wisconsin
lat lon: 44.952830 N 91.887010 W
collection date: 2016

2879119
type: Taxonomy
SIO_000068: taxonomy

LDL57_RS17180
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17180
old locus tag: LDL57_17180
so part of: sequence
location: 167..1108
location: region:167-1108:1
so has part: feature:167-1108:1:exon
subclass of: SO_0000010

position:167:1
position: 167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108:1
position: 1108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167-1108:1:exon

LDL57_RS17180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17180
old locus tag: LDL57_17180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873870.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MSKKFTPTPHDSLFKQFLSEKETAKDFFDVWLPDEIKSLCDLDSLKVESGSFIDSEMKKYQSDILYSVKTTKGKGYFYLLIEAQSSPDKLMAWRLMRYCMGAMQKHLEAGHKKLPLVFPILFYTGEKSPYPYSTDWFDCFSGRDIAEKIYTKPFKLVDVTTLDDGEIMQHKRMALLELVQKHIRRRDMTELLSEIVKLLSYNYYSDNQVITLFNYLIQEGNAKKPMEFITEIAKQSEKHEGALMTIAQQIEQMGIQKGKLEGMQEGIQKGLQEGEKQASLKIARQLLEKGVERDIVKLSTGLTDAELRNLFKD
SIO_010081: LDL57_RS17180
subclass of: SO_0000673
so part of: LDL57_RS17180
location: 167..1108
location: region:167-1108:1
so has part: feature:167-1108:1:exon

WP_225507993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167-1108:1:exon

LDL57_RS17185
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17185
old locus tag: LDL57_17185
so part of: sequence
location: 1110..1670
location: region:1110-1670:1
so has part: feature:1110-1670:1:exon
subclass of: SO_0000010

position:1110:1
position: 1110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670:1
position: 1670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110-1670:1:exon

LDL57_RS17185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17185
old locus tag: LDL57_17185
inference: COORDINATES: protein motif:HMM:NF016255.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ProQ/FINO family protein
translation: MTERQKLSLNRPRRASEETTPKSSPVYQKKIWVNSAPKKQVKKPKPQKPVKAVTQKRVEKPQPVVKVKIPKPPKPPKKRLPLAEAISQISLFWPALFPEHQLRPMTIGTQQAMWQEVKVKGLPLTKKRLRACLNSIGHHVDYRALIQLGASRYDKDGQVAGEVTQADVDDNLQRLARLNKPISTTP
SIO_010081: LDL57_RS17185
subclass of: SO_0000673
so part of: LDL57_RS17185
location: 1110..1670
location: region:1110-1670:1
so has part: feature:1110-1670:1:exon

WP_225507995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1110-1670:1:exon

LDL57_RS17190
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17190
old locus tag: LDL57_17190
so part of: sequence
location: complement(1667..2149)
location: region:1667-2149:-1
so has part: feature:1667-2149:-1:exon
subclass of: SO_0000010

position:1667:-1
position: 1667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2149:-1
position: 2149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1667-2149:-1:exon

LDL57_RS17190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17190
old locus tag: LDL57_17190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009309960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MTKKGYLLILLLIPSFGFANFSGRVVNVIDGDTIYVLMEGKLVKVRLIGIDAPELGQPFGRRSKQNLLHLSAKKQAEVMTEKQDRFGRWLGTLIIAGKNINAEQVKSGLAWAYRCHGRATDFRFLALEKKARQANIGLWSSKSPIEPWMWRKQKSDKKSD
SIO_010081: LDL57_RS17190
subclass of: SO_0000673
so part of: LDL57_RS17190
location: complement(1667..2149)
location: region:1667-2149:-1
so has part: feature:1667-2149:-1:exon

WP_225507997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1667-2149:-1:exon

LDL57_RS17195
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17195
old locus tag: LDL57_17195
so part of: sequence
location: complement(2142..2897)
location: region:2142-2897:-1
so has part: feature:2142-2897:-1:exon
subclass of: SO_0000010

position:2142:-1
position: 2142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2897:-1
position: 2897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2142-2897:-1:exon

LDL57_RS17195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17195
old locus tag: LDL57_17195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006687041.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobC family replication-relaxation protein
translation: MLIHDVVKRKEATATKLFLLLNFLKEETYSDFTILRKVLGFSPNAHSPLYKVLNRAVNERLLIKHEIPNLKRKLTIWGITLQGLVKVVSPEDKTFPHYFEPSKLKYWSMEHRLLNQRVRVALEAKGGSQWLNGDRGEFNARYRGIKHRPDGVITLSNGAIIAIETERTMKTRARYINIINSHLAASDANHWHYAMYVLPDEKNKQAILKLFEGIKTVIRHNVPVPFDAKNREMFLFRTIEELEKNTGNHHD
SIO_010081: LDL57_RS17195
subclass of: SO_0000673
so part of: LDL57_RS17195
location: complement(2142..2897)
location: region:2142-2897:-1
so has part: feature:2142-2897:-1:exon

WP_225507999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2142-2897:-1:exon

LDL57_RS17200
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17200
old locus tag: LDL57_17200
so part of: sequence
location: complement(2908..4635)
location: region:2908-4635:-1
so has part: feature:2908-4635:-1:exon
subclass of: SO_0000010

position:2908:-1
position: 2908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4635:-1
position: 4635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2908-4635:-1:exon

LDL57_RS17200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17200
old locus tag: LDL57_17200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017346477.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MHSHLLQRLNGFADAFVVFLLFLQNNPFLLAIFAGLTLPFIFHLPREERKEAPFWLKAISSTSLFFLIFGTLSPLTIQGLSLFFKSLNQDSVFRFSLWGLTFMFTGAGLIFHLIIRRLLAGEIDSLKHKIIKKSQLERNTRTDVREVKEMLPVSVSYDPLTFIDLEKGIFIGLDKSNCPQYISIKEFQSQHADIIGTTGSGKGVSASVLIYQAILLNEAVFVEDPKNDEWAPHVLKAACEKAGKRFVLINLNDLSHQLDLLADISHEQLEELFNAGFSLAKKGEGADFYRIADRRAARNTAGIHKQGMTLQDLFNSDFVRSLQEDVPAFYGELEEIALVNSINAKKGFSLKTIFDEGGCCYIIGSMRNQKIISAQRMILTRLIQIAETRDRINSKPRPVTIFLDELKYHLSRPALEGLGAARDKGVHIIMAHQSIKDLYDCPADLDGEAVAGSVIENCKFMLVYRLRDPDTAEWVAKMTGSILVDDEIRKVKTDMTLTEKIDTDRTIRQAERYYIDCNMLLNLPPFVGFAFTQNDLAKATKLSHIPAKKTHINVLCYNNNTENPDTSQPKPVINL
SIO_010081: LDL57_RS17200
subclass of: SO_0000673
so part of: LDL57_RS17200
location: complement(2908..4635)
location: region:2908-4635:-1
so has part: feature:2908-4635:-1:exon

WP_225508001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2908-4635:-1:exon

LDL57_RS17205
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17205
old locus tag: LDL57_17205
so part of: sequence
location: complement(5418..5795)
location: region:5418-5795:-1
so has part: feature:5418-5795:-1:exon
subclass of: SO_0000010

position:5418:-1
position: 5418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5795:-1
position: 5795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5418-5795:-1:exon

LDL57_RS17205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17205
old locus tag: LDL57_17205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010845493.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4354 family protein
translation: MKNLNLIAALLISCFSFTALAHTLDNIMVIATEKAKGSISAGEKNFYTKQFEIALSNSGNPIDLAHTCLKAFSIEGKEFKLDTVDEDLVKGELKSGKLLKGMVVFSSKDGAVHNANLIKISTHCK
SIO_010081: LDL57_RS17205
subclass of: SO_0000673
so part of: LDL57_RS17205
location: complement(5418..5795)
location: region:5418-5795:-1
so has part: feature:5418-5795:-1:exon

WP_225508003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5418-5795:-1:exon

LDL57_RS17210
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17210
old locus tag: LDL57_17210
pseudo: true
so part of: sequence
location: complement(5919..8043)
location: region:5919-8043:-1
so has part: feature:5919-8043:-1:exon
subclass of: SO_0000010

position:5919:-1
position: 5919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8043:-1
position: 8043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5919-8043:-1:exon

LDL57_RS17210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17210
old locus tag: LDL57_17210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020314981.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA topoisomerase 3
SIO_010081: LDL57_RS17210
subclass of: SO_0000673
so part of: LDL57_RS17210
location: complement(5919..8043)
location: region:5919-8043:-1
so has part: feature:5919-8043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5919-8043:-1:exon

LDL57_RS17215
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17215
old locus tag: LDL57_17215
so part of: sequence
location: complement(8055..8297)
location: region:8055-8297:-1
so has part: feature:8055-8297:-1:exon
subclass of: SO_0000010

position:8055:-1
position: 8055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8297:-1
position: 8297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8055-8297:-1:exon

LDL57_RS17215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17215
old locus tag: LDL57_17215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNQLKNKNDNVNHVLNEINQRAPYFFTNTNDLLNKARLFSTTYLTSNENDLRFIDDELTQRFFSLDFIENENQEIQQTK
SIO_010081: LDL57_RS17215
subclass of: SO_0000673
so part of: LDL57_RS17215
location: complement(8055..8297)
location: region:8055-8297:-1
so has part: feature:8055-8297:-1:exon

WP_180559735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8055-8297:-1:exon

LDL57_RS17220
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17220
old locus tag: LDL57_17220
so part of: sequence
location: complement(8418..8984)
location: region:8418-8984:-1
so has part: feature:8418-8984:-1:exon
subclass of: SO_0000010

position:8418:-1
position: 8418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8984:-1
position: 8984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8418-8984:-1:exon

LDL57_RS17220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17220
old locus tag: LDL57_17220
inference: COORDINATES: protein motif:HMM:NF040300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6012 family protein
translation: MLLHLSPRYYLRYSDVQLDLIDVSVPELNLTLKGGVDIVARTPYPNKCYQIACRKKGRKAINGIFIETDKKLTNFTQITRWAVNGEIATHKIHFHILDSDFDAITSEIMMWNAFYDTPFLSRKSEIHENWLPATNQPRMLPILENKKESQREQQRLIYNLVSDDGFINERTEFFPIPTIESQRITVPF
SIO_010081: LDL57_RS17220
subclass of: SO_0000673
so part of: LDL57_RS17220
location: complement(8418..8984)
location: region:8418-8984:-1
so has part: feature:8418-8984:-1:exon

WP_225508005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8418-8984:-1:exon

LDL57_RS17225
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17225
old locus tag: LDL57_17225
so part of: sequence
location: complement(9005..9364)
location: region:9005-9364:-1
so has part: feature:9005-9364:-1:exon
subclass of: SO_0000010

position:9005:-1
position: 9005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9364:-1
position: 9364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9005-9364:-1:exon

LDL57_RS17225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17225
old locus tag: LDL57_17225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001505436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGKFSKSDKERFNTRIGREVILWDYLKTDKVIADIGAEITVKDPDLYDRISNYVLLHGEDLQGMFKDEKYLYMSCFIRDVRAFRNEFELEERLKPLFSLGKGDADEFVISFPSKLNPA
SIO_010081: LDL57_RS17225
subclass of: SO_0000673
so part of: LDL57_RS17225
location: complement(9005..9364)
location: region:9005-9364:-1
so has part: feature:9005-9364:-1:exon

WP_180559738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9005-9364:-1:exon

LDL57_RS17230
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17230
old locus tag: LDL57_17230
so part of: sequence
location: complement(9368..9679)
location: region:9368-9679:-1
so has part: feature:9368-9679:-1:exon
subclass of: SO_0000010

position:9368:-1
position: 9368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9679:-1
position: 9679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9368-9679:-1:exon

LDL57_RS17230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17230
old locus tag: LDL57_17230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009635187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKTFLSAAWLLLAASYPLSAQEKIDSDDPCTVVLCMYGKLQGNNQSECNGAVRKFFSLKKFGRHGFRPWKTFVKRRDFLGGCPTADPAVVSDIMKQFGKMRG
SIO_010081: LDL57_RS17230
subclass of: SO_0000673
so part of: LDL57_RS17230
location: complement(9368..9679)
location: region:9368-9679:-1
so has part: feature:9368-9679:-1:exon

WP_180559739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9368-9679:-1:exon

LDL57_RS17235
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17235
old locus tag: LDL57_17235
so part of: sequence
location: 9757..10284
location: region:9757-10284:1
so has part: feature:9757-10284:1:exon
subclass of: SO_0000010

position:9757:1
position: 9757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10284:1
position: 10284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9757-10284:1:exon

LDL57_RS17235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17235
old locus tag: LDL57_17235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004929670.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipocalin family protein
translation: MKILRNLYLLISSLLSLSCSVSAPKGVKAVENFDLNQYLGLWYEIARLDNRFERGLERVTANYMLNPDGSVKVINRGFLPELHQWRKSIGKAKFIGSPKKGSLKVSFFWPFYGGYHVIALHPEYRYALVAGPSRNYLWLLSRTPRLETAETESLLNLARELNFPVDKLIWVNQDA
SIO_010081: LDL57_RS17235
subclass of: SO_0000673
so part of: LDL57_RS17235
location: 9757..10284
location: region:9757-10284:1
so has part: feature:9757-10284:1:exon

WP_180559725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9757-10284:1:exon

LDL57_RS17240
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17240
old locus tag: LDL57_17240
so part of: sequence
location: complement(10291..11550)
location: region:10291-11550:-1
so has part: feature:10291-11550:-1:exon
subclass of: SO_0000010

position:10291:-1
position: 10291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11550:-1
position: 11550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10291-11550:-1:exon

LDL57_RS17240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17240
old locus tag: LDL57_17240
inference: COORDINATES: protein motif:HMM:NF016785.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shufflon system plasmid conjugative transfer pilus tip adhesin PilV
translation: MSKIHQNRIKEIDRGFIALEVLGVLVIMALLALWGAEKYSEFLEEQEWIVSARHFSEFNEAAKHYIADHYDELLTQPKSTLNNALLIKKGYLQKGFSDKNPFGQQYVTGIVRNNQKRPPALQALTCSVNGENLTEKGMRRIAAQINGMGGFVDERNLAIGAYGGWISQPKDFGLDCRFGHIAIALSSEILGSVLQESDRLYRFQVKHKPELNRMHTHIDMGGNNLNNANAVNAKEGVFSKTVTANGDIKSQGGWLVTQDNKGWINTKHGGGFYMTDKEWIRAVNNKSIYTGGQLKGGTVRAEGRLSTGDFLQLEKVVVEGSSCPTSGLVSRDAKGAVLSCQTGRWTKTTGLGPVSYHKTNSGAKNIGSHEFCAIAGFNLPGQYFSNVACHVKPDEHKNWILSGSPPSFVHFQCEAICIN
SIO_010081: LDL57_RS17240
subclass of: SO_0000673
so part of: LDL57_RS17240
location: complement(10291..11550)
location: region:10291-11550:-1
so has part: feature:10291-11550:-1:exon

WP_225507933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10291-11550:-1:exon

LDL57_RS17245
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17245
old locus tag: LDL57_17245
so part of: sequence
location: 11884..12141
location: region:11884-12141:1
so has part: feature:11884-12141:1:exon
subclass of: SO_0000010

position:11884:1
position: 11884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12141:1
position: 12141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11884-12141:1:exon

LDL57_RS17245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17245
old locus tag: LDL57_17245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006869537.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MTITTISSREFNQDVSKAKRAALSGPVFITDRGHTAHVLLSVEEYKKITDKKESIVDLLAMPEASEIEFESPRLNTNLYHSTDFS
SIO_010081: LDL57_RS17245
subclass of: SO_0000673
so part of: LDL57_RS17245
location: 11884..12141
location: region:11884-12141:1
so has part: feature:11884-12141:1:exon

WP_225508007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11884-12141:1:exon

LDL57_RS17250
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17250
old locus tag: LDL57_17250
so part of: sequence
location: 12141..12572
location: region:12141-12572:1
so has part: feature:12141-12572:1:exon
subclass of: SO_0000010

position:12572:1
position: 12572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12141-12572:1:exon

LDL57_RS17250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17250
old locus tag: LDL57_17250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012987825.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MYLLDTNVISELRKAKSNRADKKVIAWAKSVSASRMFLSVITILELETGILLVERKDPTQGAILRSWLNLHVLPTFLERIIPMDTAVAQRCAKLHIPDPRSDRDSIIAATALVHDLTVVTRNVCDFSATKVDILNPWKFSTKK
SIO_010081: LDL57_RS17250
subclass of: SO_0000673
so part of: LDL57_RS17250
location: 12141..12572
location: region:12141-12572:1
so has part: feature:12141-12572:1:exon

WP_225508009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12141-12572:1:exon

LDL57_RS17905
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17905
so part of: sequence
location: 12594..12722
location: region:12594-12722:1
so has part: feature:12594-12722:1:exon
subclass of: SO_0000010

position:12594:1
position: 12594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12722:1
position: 12722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12594-12722:1:exon

LDL57_RS17905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRLNTKTGQTEGSESRHPVATVLDTLIFLPVKQTPPKRQHL
SIO_010081: LDL57_RS17905
subclass of: SO_0000673
so part of: LDL57_RS17905
location: 12594..12722
location: region:12594-12722:1
so has part: feature:12594-12722:1:exon

WP_255653938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12594-12722:1:exon

LDL57_RS17255
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17255
old locus tag: LDL57_17255
so part of: sequence
location: complement(12931..13164)
location: region:12931-13164:-1
so has part: feature:12931-13164:-1:exon
subclass of: SO_0000010

position:12931:-1
position: 12931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13164:-1
position: 13164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12931-13164:-1:exon

LDL57_RS17255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17255
old locus tag: LDL57_17255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSLFKVLIILALPGFSSPSLAIDNDNDKYIPASKIDFFTDKINGKTRVCWNHPNKNAYCINETSEGLITVPYKDTH
SIO_010081: LDL57_RS17255
subclass of: SO_0000673
so part of: LDL57_RS17255
location: complement(12931..13164)
location: region:12931-13164:-1
so has part: feature:12931-13164:-1:exon

WP_225507714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12931-13164:-1:exon

LDL57_RS17260
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17260
old locus tag: LDL57_17260
so part of: sequence
location: complement(13293..13475)
location: region:13293-13475:-1
so has part: feature:13293-13475:-1:exon
subclass of: SO_0000010

position:13293:-1
position: 13293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13475:-1
position: 13475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13293-13475:-1:exon

LDL57_RS17260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17260
old locus tag: LDL57_17260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYNTMPFTSAICWLSFWIGSILIGASWLYARLQEKAFLVGLSKGFLNVTSPDSTVVSLL
SIO_010081: LDL57_RS17260
subclass of: SO_0000673
so part of: LDL57_RS17260
location: complement(13293..13475)
location: region:13293-13475:-1
so has part: feature:13293-13475:-1:exon

WP_225507716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13293-13475:-1:exon

LDL57_RS17265
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17265
old locus tag: LDL57_17265
so part of: sequence
location: complement(13591..13866)
location: region:13591-13866:-1
so has part: feature:13591-13866:-1:exon
subclass of: SO_0000010

position:13591:-1
position: 13591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13866:-1
position: 13866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13591-13866:-1:exon

LDL57_RS17265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17265
old locus tag: LDL57_17265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010891189.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: colicin E3-like toxin immunity protein
translation: MGLKLQLSWFDKSTEVCIGEEYSIDLGENGTVIELLGLPIKGTINNGAFDIAMNWIKILQPYFNHKIKYDYYDYFVSFVYREDWPDNNKQT
SIO_010081: LDL57_RS17265
subclass of: SO_0000673
so part of: LDL57_RS17265
location: complement(13591..13866)
location: region:13591-13866:-1
so has part: feature:13591-13866:-1:exon

WP_225508011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13591-13866:-1:exon

LDL57_RS17270
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17270
old locus tag: LDL57_17270
so part of: sequence
location: complement(13876..15732)
location: region:13876-15732:-1
so has part: feature:13876-15732:-1:exon
subclass of: SO_0000010

position:13876:-1
position: 13876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15732:-1
position: 15732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13876-15732:-1:exon

LDL57_RS17270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17270
old locus tag: LDL57_17270
inference: COORDINATES: protein motif:HMM:NF018642.2
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: colicin E3/pyocin S6 family cytotoxin
translation: MGSLAQGKTLDQFLSLSIPAKTIGLNDKQQLHQATTTGEIALPVRGRLVMSNDKVEVMAVRPQNATPVKVISAVKDAASGLYVHSLPKTNAQSASIQVVTAPSITSSLEGQPPLVSSLPRTPVSVRSPFSDATQISASGAIPFQDAILVYPEAANMEPVYVMYGARSQNTIEQAQKGLAIANQSLATLNRQYQTELAALNKLKATPEGRTLSNPAKYPLTYQQSSQQLSKTQRIIAIKDKSLVDILLGKGISAYSTEVMKRENSKASFNNVPGIVITKDAYENLGRRLLDTNKKISQQTTRLQTFASSRQQAQARIRAAEAKLKNELNQLLTTNQGIKSPNNPYYPPPATQLLTDYLGLQASPAKTPLDDGVSQKPRWANTTGDTIYEWNSLNGSLETYKPGHWETEIGKGGKEARVWVVESVINPATGLYGITLPDEQGNQGRTILISPINAPGTQGLGPLLHPEKQQVVILNTGNNQPVKNPIVRVYPNLIPPDVETPVTVPPLENGYQPLYVMFSKIREGVKAAGHDYHHHPKTEEITGLVGLTRRTNKTPRQNSGGKRERWIDAKGRRIYEWDYQHGELEGYRASDGQHIGSFDYKTGMQTKPAVLGRNIKKYL
SIO_010081: LDL57_RS17270
subclass of: SO_0000673
so part of: LDL57_RS17270
location: complement(13876..15732)
location: region:13876-15732:-1
so has part: feature:13876-15732:-1:exon

WP_225508013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13876-15732:-1:exon

LDL57_RS17275
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17275
old locus tag: LDL57_17275
so part of: sequence
location: complement(15912..16160)
location: region:15912-16160:-1
so has part: feature:15912-16160:-1:exon
subclass of: SO_0000010

position:15912:-1
position: 15912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16160:-1
position: 16160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15912-16160:-1:exon

LDL57_RS17275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17275
old locus tag: LDL57_17275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000412701.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacteriocin immunity protein
translation: MKSKKYSDYTENEFLKLIKSLFDGGFNSEEERDSIVHEIINAAEHPDGTDILFYPKDDSPEGILNCIKEWRAKNGKPGFKPE
SIO_010081: LDL57_RS17275
subclass of: SO_0000673
so part of: LDL57_RS17275
location: complement(15912..16160)
location: region:15912-16160:-1
so has part: feature:15912-16160:-1:exon

WP_225508014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15912-16160:-1:exon

LDL57_RS17280
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17280
old locus tag: LDL57_17280
so part of: sequence
location: complement(16163..18349)
location: region:16163-18349:-1
so has part: feature:16163-18349:-1:exon
subclass of: SO_0000010

position:16163:-1
position: 16163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18349:-1
position: 18349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16163-18349:-1:exon

LDL57_RS17280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17280
old locus tag: LDL57_17280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011146158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-type pyocin domain-containing protein
translation: MSSAGAGSLVLTNPSGVSLLNQFTNAINTLNASASRLLSSAAANLAPLSAAADTAAMAVSRGFVVASILYPPKAGEGSDLAQGKTLDQFLSLSIPAKTIGLNDKQQLHQATTTGEIALPVRGRLVMSNDKVEVMAVRPQNATPVKVISAVKDAASGLYVHSLPKTNAQSASIQVVTAPSITSSLEGQPPLVSSLPRTPVSVRSPFSDATQISASGAIPFQDAILVYPEAANMEPVYVMYGARSQNTIEQAQKGLAIANQSLDTINRQYQTELAALNRLKATPEGRTLSNPAKYPLTYQQSSQQLSKTQRIIAIKDKSLVDILLGKGISAYSTEVMKRENSKASFNNVPAIVITKDAYENLGRRLLDTNKKISQQTTRLQTFTTSRQQAQARITAAEAKLKNELNQLLTANQGIKSPNNPYYPPPATQLLTDYLGLQASPAKTPLDDGVSQKPRWANTTGDTIYEWNSLNGSLETYKPGHWETEIGKGGKEARVWVVESVINPATGLYGITLPDEQGNQGRTILINPINAPGTQGLGPLLHPEKQQVVILNTGNNQPVKNPIVRVYPNLIPPDVETLVTVPPLENGYQPLYVMFNNPRYLPGVVTGNGKAITGIWLDKAGDELGAPIPSQIADKLRGKEFASFDQFRKTFWQEVAKDPELSGQFKGINQSGMRDGLSPFSPKNEQVGGREKYEIHHIKPIKDGGEVYNLDNLSVLTPKRHISIHSKKGS
SIO_010081: LDL57_RS17280
subclass of: SO_0000673
so part of: LDL57_RS17280
location: complement(16163..18349)
location: region:16163-18349:-1
so has part: feature:16163-18349:-1:exon

WP_225508017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16163-18349:-1:exon

LDL57_RS17285
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17285
old locus tag: LDL57_17285
so part of: sequence
location: complement(18591..18824)
location: region:18591-18824:-1
so has part: feature:18591-18824:-1:exon
subclass of: SO_0000010

position:18591:-1
position: 18591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18824:-1
position: 18824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18591-18824:-1:exon

LDL57_RS17285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17285
old locus tag: LDL57_17285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKITHTPISYPSYLNEDKNKTEKDENNPANTPSSYEVAPEKSDEESRGNTGFQPDYLLHQQRQKKEYSVQSIIRKKE
SIO_010081: LDL57_RS17285
subclass of: SO_0000673
so part of: LDL57_RS17285
location: complement(18591..18824)
location: region:18591-18824:-1
so has part: feature:18591-18824:-1:exon

WP_225508019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18591-18824:-1:exon

LDL57_RS17290
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17290
old locus tag: LDL57_17290
so part of: sequence
location: complement(18882..19544)
location: region:18882-19544:-1
so has part: feature:18882-19544:-1:exon
subclass of: SO_0000010

position:18882:-1
position: 18882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19544:-1
position: 19544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18882-19544:-1:exon

LDL57_RS17290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17290
old locus tag: LDL57_17290
inference: COORDINATES: protein motif:HMM:NF013632.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A24 family peptidase
translation: MSLLLLSILLQGAAVVTAKHFLDKYQEQPLSTLGNFLPVIGGVFTLLSFMSALGCPTITHTLFSLIFYAFLALFFYLDAASRCLPRCFTLAFGLIGISFRFLLYQETVLLALLSALSVFGMLWGLRTLTFRQDGHAKFGLGDIYLMAGLGVWLSLTIVLWVIIGAVFLAGFVLLVRRLRYPKRWQQDDDFRYLPFAPFLCSVVAFYALNSDVTLNYWFFL
SIO_010081: LDL57_RS17290
subclass of: SO_0000673
so part of: LDL57_RS17290
location: complement(18882..19544)
location: region:18882-19544:-1
so has part: feature:18882-19544:-1:exon

WP_225508020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18882-19544:-1:exon

LDL57_RS17295
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17295
old locus tag: LDL57_17295
so part of: sequence
location: complement(19813..20250)
location: region:19813-20250:-1
so has part: feature:19813-20250:-1:exon
subclass of: SO_0000010

position:19813:-1
position: 19813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20250:-1
position: 20250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19813-20250:-1:exon

LDL57_RS17295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17295
old locus tag: LDL57_17295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873682.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MTFWLAICLSRTAQAFCFNEAGALYQIDPKLLKVIAQQESSLSAKAVNHNRDKQGRVLSVDYGLMQVNSVHIPKLKKLGIITDYQDLLSKPCLNVKIGAWILAQHLQRCGVNWNCLGSYNAGFHPRSQHKRLRYAKLIYQRYVQH
SIO_010081: LDL57_RS17295
subclass of: SO_0000673
so part of: LDL57_RS17295
location: complement(19813..20250)
location: region:19813-20250:-1
so has part: feature:19813-20250:-1:exon

WP_225507748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19813-20250:-1:exon

LDL57_RS17300
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17300
old locus tag: LDL57_17300
so part of: sequence
location: complement(20345..20923)
location: region:20345-20923:-1
so has part: feature:20345-20923:-1:exon
subclass of: SO_0000010

position:20345:-1
position: 20345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20923:-1
position: 20923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20345-20923:-1:exon

LDL57_RS17300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17300
old locus tag: LDL57_17300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 4 pilus major pilin
translation: MNNKRNIHRGFVTLEILGGLAVLAVIIVLAVGAVSKMFNKSTLNDEIANVQSLATQTRGMLKTKGEYAFTSGVKMTGTLIQFGGVPSGMTINGEKSKGDAKMTNGWGGEVIVAPEKVQGSQNNKGFSITYKNVPQEACSVMATKLSSSTLLNEVSISGSNNVGVVTAEKAATQCKPDNGSNGVNTLIFKSNN
SIO_010081: LDL57_RS17300
subclass of: SO_0000673
so part of: LDL57_RS17300
location: complement(20345..20923)
location: region:20345-20923:-1
so has part: feature:20345-20923:-1:exon

WP_225507731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20345-20923:-1:exon

LDL57_RS17305
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17305
old locus tag: LDL57_17305
so part of: sequence
location: complement(21111..21515)
location: region:21111-21515:-1
so has part: feature:21111-21515:-1:exon
subclass of: SO_0000010

position:21111:-1
position: 21111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21515:-1
position: 21515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21111-21515:-1:exon

LDL57_RS17305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17305
old locus tag: LDL57_17305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MQKYKINRSRHAAFLLHVHLVFVTKYRKKVLSGLHYKAFHQYAGEVCRDFGADLKESNGESDHVHMLIEYPPTVQLSVLVNSLKAVTSRRLRNEFLDLRGAYGKPVLWSRSYFAGSCGGAPLEVVKQYIQNQRG
SIO_010081: LDL57_RS17305
subclass of: SO_0000673
so part of: LDL57_RS17305
location: complement(21111..21515)
location: region:21111-21515:-1
so has part: feature:21111-21515:-1:exon

WP_225505529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21111-21515:-1:exon

LDL57_RS17310
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17310
old locus tag: LDL57_17310
pseudo: true
so part of: sequence
location: 21574..22798
location: region:21574-22798:1
so has part: feature:21574-22798:1:exon
subclass of: SO_0000010

position:21574:1
position: 21574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22798:1
position: 22798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21574-22798:1:exon

LDL57_RS17310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17310
old locus tag: LDL57_17310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020308204.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LDL57_RS17310
subclass of: SO_0000673
so part of: LDL57_RS17310
location: 21574..22798
location: region:21574-22798:1
so has part: feature:21574-22798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21574-22798:1:exon

LDL57_RS17315
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17315
old locus tag: LDL57_17315
so part of: sequence
location: 22833..23108
location: region:22833-23108:1
so has part: feature:22833-23108:1:exon
subclass of: SO_0000010

position:22833:1
position: 22833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23108:1
position: 23108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22833-23108:1:exon

LDL57_RS17315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17315
old locus tag: LDL57_17315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGEDVNIEKAVKEKYRLFISGEISATEFLACIGELAVGWSIEAFDTQGFGAWPLHSESTKAQLKRKGVIEARLLQDTGALKKSITYQVVKK
SIO_010081: LDL57_RS17315
subclass of: SO_0000673
so part of: LDL57_RS17315
location: 22833..23108
location: region:22833-23108:1
so has part: feature:22833-23108:1:exon

WP_225508022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22833-23108:1:exon

LDL57_RS17320
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17320
old locus tag: LDL57_17320
so part of: sequence
location: 23105..23488
location: region:23105-23488:1
so has part: feature:23105-23488:1:exon
subclass of: SO_0000010

position:23105:1
position: 23105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23488:1
position: 23488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23105-23488:1:exon

LDL57_RS17320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17320
old locus tag: LDL57_17320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLPNMARTIRRFSQPLTFITEVITTKDFKPDFAVTRKSIEGVISSLPDEAINKDSLDWSLTYYTVHVQPQYADLLGVYLEYKGKTFKSINRKDYSDYGYVRYVFEEVKDSEITCRLLKDSPLNSAS
SIO_010081: LDL57_RS17320
subclass of: SO_0000673
so part of: LDL57_RS17320
location: 23105..23488
location: region:23105-23488:1
so has part: feature:23105-23488:1:exon

WP_225508024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23105-23488:1:exon

LDL57_RS17325
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17325
old locus tag: LDL57_17325
so part of: sequence
location: complement(23442..23717)
location: region:23442-23717:-1
so has part: feature:23442-23717:-1:exon
subclass of: SO_0000010

position:23442:-1
position: 23442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23717:-1
position: 23717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23442-23717:-1:exon

LDL57_RS17325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17325
old locus tag: LDL57_17325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017348369.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MRIIKKYTPPTTEDLKKLKNKMSFTGNQMAELCGLSGANQWRKYTGGEKPRTMNQHILFFVAAQLALNEDELNKILTKMQSLGASLSRDDK
SIO_010081: LDL57_RS17325
subclass of: SO_0000673
so part of: LDL57_RS17325
location: complement(23442..23717)
location: region:23442-23717:-1
so has part: feature:23442-23717:-1:exon

WP_135678450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23442-23717:-1:exon

LDL57_RS17330
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17330
old locus tag: LDL57_17330
so part of: sequence
location: complement(23746..23928)
location: region:23746-23928:-1
so has part: feature:23746-23928:-1:exon
subclass of: SO_0000010

position:23746:-1
position: 23746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23928:-1
position: 23928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23746-23928:-1:exon

LDL57_RS17330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17330
old locus tag: LDL57_17330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010400642.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEKVKALHDVEIEKIRAEISKLMAETSKINKETIWYPIAVSASLVAAVAGITAIIIKFI
SIO_010081: LDL57_RS17330
subclass of: SO_0000673
so part of: LDL57_RS17330
location: complement(23746..23928)
location: region:23746-23928:-1
so has part: feature:23746-23928:-1:exon

WP_135678451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23746-23928:-1:exon

LDL57_RS17335
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17335
old locus tag: LDL57_17335
so part of: sequence
location: 24002..24541
location: region:24002-24541:1
so has part: feature:24002-24541:1:exon
subclass of: SO_0000010

position:24002:1
position: 24002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24541:1
position: 24541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24002-24541:1:exon

LDL57_RS17335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17335
old locus tag: LDL57_17335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIQNTNLHHKNYQPPIQRLAMVIRDTLEVAENTIFIGRENLANQDFDAPVISIEQSGNSEVKGFSETYRRNVEVMEYSQHEKILFDVNVWGKQALQRAQILLRLLRTQKGFEQQWKHTISLSAPMGVRDLHFATGSQYRERVMFSINASVADYINVSTPSINHLTFQLSNEKGLQHEQ
SIO_010081: LDL57_RS17335
subclass of: SO_0000673
so part of: LDL57_RS17335
location: 24002..24541
location: region:24002-24541:1
so has part: feature:24002-24541:1:exon

WP_180558443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24002-24541:1:exon

LDL57_RS17340
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17340
old locus tag: LDL57_17340
so part of: sequence
location: 24531..26060
location: region:24531-26060:1
so has part: feature:24531-26060:1:exon
subclass of: SO_0000010

position:24531:1
position: 24531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26060:1
position: 26060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24531-26060:1:exon

LDL57_RS17340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17340
old locus tag: LDL57_17340
inference: COORDINATES: protein motif:HMM:NF023291.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3383 family protein
translation: MNNNLGIDIENVVNVQLLKEQRGANYDNINHVIMMTSETGAIFDGKTIHATYKNIAGVKADFGITSKTYQMATAFFGTSPNPIGSGGSLIIGHWRKTDLTLPPVEFDTLTGSEIDSNALLKTLRQIEDGSITLGELTLENLNFGDAVTFYDVINILNQALPDGYPSAENQPDNNNLPTNGKSAFAYLDKRLVVSGKGLANASEGGTGTFIGNLLGLGDSATLTKATPSKTLPAQSPDEAIADVVAASSGCGYCFVDELTNDQILKLASYSQANKILGYQVVSHPDNLTTKGLAWQVSKKGQEYFRLLFSRRNQKALAVSYMARVHVVDFSAENSAMTIHLKELACEPESYSQTEVDSASSVGIDIYTLIKDRPVVMCSNANEFVDNVYNLKAYVNQVQVDTFNLMKSTATKIPQTEKGVELLVDCINQVAARFVRASVFAAGKWTSPDTFGDEEQFKRAIESKGYFTYANLLAEQSQVDRINRKSPTIQQAVKNAGAFHRADIIINFNY
SIO_010081: LDL57_RS17340
subclass of: SO_0000673
so part of: LDL57_RS17340
location: 24531..26060
location: region:24531-26060:1
so has part: feature:24531-26060:1:exon

WP_225508026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24531-26060:1:exon

LDL57_RS17345
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17345
old locus tag: LDL57_17345
so part of: sequence
location: 26070..26501
location: region:26070-26501:1
so has part: feature:26070-26501:1:exon
subclass of: SO_0000010

position:26070:1
position: 26070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26501:1
position: 26501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26070-26501:1:exon

LDL57_RS17345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17345
old locus tag: LDL57_17345
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQISYDVDATTVILGGRVLSDFIAGTTVQITFPNPDTSRFNGSGGSVSVAKRTDAKVSELEFHILRGSADDVWLSTLQGSGEVTLLNASVSTLYKLDGKAKTETFTFTGGSITDQPQFTFANTDHNAEMTYKLQFRDFTRSI
SIO_010081: LDL57_RS17345
subclass of: SO_0000673
so part of: LDL57_RS17345
location: 26070..26501
location: region:26070-26501:1
so has part: feature:26070-26501:1:exon

WP_180558445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26070-26501:1:exon

LDL57_RS17350
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17350
old locus tag: LDL57_17350
so part of: sequence
location: 26514..26879
location: region:26514-26879:1
so has part: feature:26514-26879:1:exon
subclass of: SO_0000010

position:26514:1
position: 26514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26879:1
position: 26879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26514-26879:1:exon

LDL57_RS17350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17350
old locus tag: LDL57_17350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEQGLGSLTGLSQDDIVDITKNKTFKVQGNEFQIGNFNHHLRLKALKIVEDLGQSKRIAATLSSHSDGNLRQLFNQITHDGMSISKLPHFFDEKPELFIPLTLTVLHLFAAPFLSALTAS
SIO_010081: LDL57_RS17350
subclass of: SO_0000673
so part of: LDL57_RS17350
location: 26514..26879
location: region:26514-26879:1
so has part: feature:26514-26879:1:exon

WP_225507960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26514-26879:1:exon

LDL57_RS17910
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17910
so part of: sequence
location: 26987..27109
location: region:26987-27109:1
so has part: feature:26987-27109:1:exon
subclass of: SO_0000010

position:26987:1
position: 26987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27109:1
position: 27109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26987-27109:1:exon

LDL57_RS17910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGELLALRDDDMFFYLKTAEHAFITGAIEWKQHDEAKQKR
SIO_010081: LDL57_RS17910
subclass of: SO_0000673
so part of: LDL57_RS17910
location: 26987..27109
location: region:26987-27109:1
so has part: feature:26987-27109:1:exon

WP_255498970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26987-27109:1:exon

LDL57_RS17355
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17355
old locus tag: LDL57_17355
so part of: sequence
location: 27113..28849
location: region:27113-28849:1
so has part: feature:27113-28849:1:exon
subclass of: SO_0000010

position:27113:1
position: 27113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28849:1
position: 28849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27113-28849:1:exon

LDL57_RS17355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17355
old locus tag: LDL57_17355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEEKLSLDIGVNANAGVIDTLITALNELSRQLGGVTGKFTTVTAKVDQLGIESASTAKDVHKASDSVDELGKEAKKTESILGKLGEKLSEFKGIITGAFTLTAIMSAGEQINNFNKAVRQTGIDAKCFQVLREGAQTVGVSFDELSDGVKEFQRAINSDGDTASQVFKKLGVAFKDSNGKIRDTSVLLRETGSALNNIQDKGARTALAEQVGLSYEMVDAIGKTRQEWTELEKKVAEGRALTQDDLEQAEIFRRTFASVLLQLQQIAEKVFATLAPIFNFVLKGLQPVIGFIARVVGAFAKLITFLNKTTDGFWLLIPAALALVKVFPLITAGIKAIGAAILANPVFFGATVLIIGIIAALEDLYVWLNGGKSVIGEFLEGWGIFPDDVRKMIDTVIGYFSAMWDQIIKDFTDLSNFLTAFFSDDWDTVIAILKQAFVQFWTDLKAIFSPLVNWFSDKFTAIGNWCEKTFNDAFDAVTQFFIQMWEDIKAPFVAAWNWIKGIFTSGTAETTEEMTASLQTVAEILETIFTTPLEIVKALFSGNFGDIGNIISDKFKKVADGVKKILGCAWKTENILR
SIO_010081: LDL57_RS17355
subclass of: SO_0000673
so part of: LDL57_RS17355
location: 27113..28849
location: region:27113-28849:1
so has part: feature:27113-28849:1:exon

WP_225507962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27113-28849:1:exon

LDL57_RS17360
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17360
old locus tag: LDL57_17360
so part of: sequence
location: 29065..29688
location: region:29065-29688:1
so has part: feature:29065-29688:1:exon
subclass of: SO_0000010

position:29065:1
position: 29065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29688:1
position: 29688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29065-29688:1:exon

LDL57_RS17360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17360
old locus tag: LDL57_17360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016809496.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MYIHGYLRASTKEQDALRAKNRMKAFVEEKGFRMASWYTENVSGASLQRPELLRLLDDAASGDIILIEQVDRLSRLDEKGWEKLKRLIQEKDLIVVSLDLPTSHIALTSNVGDEFTFVMLKAINGMMLDMLAAIARKDYLDRRRRQQEGIAKAKAVGKFRGRQADHQLHEKIIELRVNNRQSIRDTARLCGVSERTVIRIVKQKTFS
SIO_010081: LDL57_RS17360
subclass of: SO_0000673
so part of: LDL57_RS17360
location: 29065..29688
location: region:29065-29688:1
so has part: feature:29065-29688:1:exon

WP_006663401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29065-29688:1:exon

LDL57_RS17365
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17365
old locus tag: LDL57_17365
pseudo: true
so part of: sequence
location: 29745..32722
location: region:29745-32722:1
so has part: feature:29745-32722:1:exon
subclass of: SO_0000010

position:29745:1
position: 29745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32722:1
position: 32722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29745-32722:1:exon

LDL57_RS17365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17365
old locus tag: LDL57_17365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001556584.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: LDL57_RS17365
subclass of: SO_0000673
so part of: LDL57_RS17365
location: 29745..32722
location: region:29745-32722:1
so has part: feature:29745-32722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29745-32722:1:exon

LDL57_RS17370
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17370
old locus tag: LDL57_17370
pseudo: true
so part of: sequence
location: 32737..33120
location: region:32737-33120:1
so has part: feature:32737-33120:1:exon
subclass of: SO_0000010

position:32737:1
position: 32737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33120:1
position: 33120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32737-33120:1:exon

LDL57_RS17370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17370
old locus tag: LDL57_17370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005249500.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
SIO_010081: LDL57_RS17370
subclass of: SO_0000673
so part of: LDL57_RS17370
location: 32737..33120
location: region:32737-33120:1
so has part: feature:32737-33120:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32737-33120:1:exon

LDL57_RS17375
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17375
old locus tag: LDL57_17375
so part of: sequence
location: complement(33258..34226)
location: region:33258-34226:-1
so has part: feature:33258-34226:-1:exon
subclass of: SO_0000010

position:33258:-1
position: 33258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34226:-1
position: 34226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33258-34226:-1:exon

LDL57_RS17375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17375
old locus tag: LDL57_17375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019076906.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2184 domain-containing protein
translation: MAIEEAYFETVLQEALTERDTQLQEKQLPEINIGEAIPINEGLDFADEYVEYGITEVLGSVKDGIIGNKTNSLVTIDSTIEMYKAPVCQWAKAVVWTQQELEKINKININLQSKKQDDLYANALSTLQYAGYLGHQHLKGQEGLLTGSKVQVMNDESGKSLKDMIANEFIKLVLDTYNKAWANSDYRVQPTHIAMDAADFMLAMQKFDSQSPIVGTDLLPVSAMDRIMAALRKASGNDSFTITFVKVPAGYAREITKGKTRLAIYTYDEEYVEMKVHMPELLAVRQRDLLTYECGYRSAFGGAMWKQPLSAVYADYKTAPKS
SIO_010081: LDL57_RS17375
subclass of: SO_0000673
so part of: LDL57_RS17375
location: complement(33258..34226)
location: region:33258-34226:-1
so has part: feature:33258-34226:-1:exon

WP_225507966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33258-34226:-1:exon

LDL57_RS17380
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17380
old locus tag: LDL57_17380
so part of: sequence
location: complement(34230..34709)
location: region:34230-34709:-1
so has part: feature:34230-34709:-1:exon
subclass of: SO_0000010

position:34230:-1
position: 34230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34709:-1
position: 34709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34230-34709:-1:exon

LDL57_RS17380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17380
old locus tag: LDL57_17380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011147117.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASGFTNWDSDKGTLRAGTIYRASSSNDKVWGEENNTTTDLPYGVFVAVNPDGGIKPISAATDVIHGIVVRDIYGDKAPHNKQVNVGHFSHGDCVGVATAKDQTFKRGDKVYVVATGDDVGKVSKTATGNIDLGYWVENVSSGSQCVAITLGFIQKVGE
SIO_010081: LDL57_RS17380
subclass of: SO_0000673
so part of: LDL57_RS17380
location: complement(34230..34709)
location: region:34230-34709:-1
so has part: feature:34230-34709:-1:exon

WP_225507967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34230-34709:-1:exon

LDL57_RS17385
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17385
old locus tag: LDL57_17385
so part of: sequence
location: complement(34709..35896)
location: region:34709-35896:-1
so has part: feature:34709-35896:-1:exon
subclass of: SO_0000010

position:35896:-1
position: 35896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34709-35896:-1:exon

LDL57_RS17385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17385
old locus tag: LDL57_17385
inference: COORDINATES: protein motif:HMM:NF021494.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2213 domain-containing protein
translation: MNGNDNRLPIDIKGAQQLETGYRIPSKIAKVGIQEFEGKELSSHVPNLIPTQRYKVEVLPEDLFDVETIASFEGKPLTFFHAPNNEVTSNNWKDTAIGHVQNVKQDGDYLSADVFLYDAEAIAAIKNYQIKELSCGYKSFIEPTGTTGVDFKKTHIRGDHVAIVDVGRSGHDVKLGDSAVSMKAKLAAVKGQHTLGDEGETPDTLDTLLIQMSDYIQLLTESADEATKEIGEILTGLIGKAQSLNVTASPTSEVKQGDDASEITSVPENTESTDEKSLIETLKKQLEELTEKLKALEEENARLKAEKELAETEAEAKSTFGDVAIGHARTARQIKENVIIAKGLVTQLEARKLGDSAINGKYDYLINRQREQNKPRLNLGDRKPTKSASQRLGGR
SIO_010081: LDL57_RS17385
subclass of: SO_0000673
so part of: LDL57_RS17385
location: complement(34709..35896)
location: region:34709-35896:-1
so has part: feature:34709-35896:-1:exon

WP_225507968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34709-35896:-1:exon

LDL57_RS17390
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17390
old locus tag: LDL57_17390
so part of: sequence
location: complement(35883..36761)
location: region:35883-36761:-1
so has part: feature:35883-36761:-1:exon
subclass of: SO_0000010

position:35883:-1
position: 35883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36761:-1
position: 36761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35883-36761:-1:exon

LDL57_RS17390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17390
old locus tag: LDL57_17390
inference: COORDINATES: protein motif:HMM:NF016148.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage minor head protein
translation: MNLPPKSKLTGRECKPINPSKRAEVYYASSVKHLISLFKLVVKQEISRENQQRNFGDASPNSIQKRFQTFNRIVDRFLTIDISAFATRVARNFANITNADNKKRLSREFESVIAINPAAVLDSKQTQDFFNGMIGENVQLIKGLHTESLSHVQKIVQSMIGGGKTLREAGKEITAALNIQQNRGMRIAIDQSRKAMGDLTNLRMQKLGIKLYRWSAVMDKRKNGGTRPSHAAMNNRICRFDDPSVYFNDKTKQWEKRKRIGGVELHPSQDFNCRCVSKVILQSIEGLNDERQ
SIO_010081: LDL57_RS17390
subclass of: SO_0000673
so part of: LDL57_RS17390
location: complement(35883..36761)
location: region:35883-36761:-1
so has part: feature:35883-36761:-1:exon

WP_225507969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35883-36761:-1:exon

LDL57_RS17395
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17395
old locus tag: LDL57_17395
so part of: sequence
location: complement(36718..38100)
location: region:36718-38100:-1
so has part: feature:36718-38100:-1:exon
subclass of: SO_0000010

position:36718:-1
position: 36718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38100:-1
position: 38100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36718-38100:-1:exon

LDL57_RS17395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17395
old locus tag: LDL57_17395
inference: COORDINATES: protein motif:HMM:NF018125.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1073 domain-containing protein
translation: MFSSFRKKSPQKLADGGLDNLMREVNAIGSSTTTLPSSFTALGIAGAGYFETDKGLAWLYERVSIVQKYINKTSGDCIKHWRTVRFTGDDETRTEQLNDVFTGEEKRLNIKKHAELALKLASLYGGSLLIALTDEENLEKPLNVNNEQLKGFLVVRQGEYRIRKIATNIFSPCFNKPLLFELKSDEKILVHHSRCCLTVVNQITNSTVRANEKANDGKSDILAFIADLLGYLYVNDEVLGMLREMKSDIFLLKDLNTGITNGRGKEIIDWLQLVLQAKKRHNVLMLDADSQYEQKELSLANVSDIWTKAQDRLAIAMDRPKTILFGDGAAGFSTGQEDLQSYYDTIFEIQESRLRPIINFFDKFICAKHGISETEVAFEFVQIKTENKAESATNLNTVTTALMLLLEHGVIEPQDALNELNRRELVDVKNVPEVTMMANLLSEEDDREFTTQKQINGEGV
SIO_010081: LDL57_RS17395
subclass of: SO_0000673
so part of: LDL57_RS17395
location: complement(36718..38100)
location: region:36718-38100:-1
so has part: feature:36718-38100:-1:exon

WP_225507970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36718-38100:-1:exon

LDL57_RS17400
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17400
old locus tag: LDL57_17400
so part of: sequence
location: 38204..38470
location: region:38204-38470:1
so has part: feature:38204-38470:1:exon
subclass of: SO_0000010

position:38204:1
position: 38204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38470:1
position: 38470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38204-38470:1:exon

LDL57_RS17400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17400
old locus tag: LDL57_17400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014003226.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MRHSETYVRARIDENTKQRATAALEAMGLSVSDAIRLLMLRVADEQRLPFDVKVPNSTTKKAIAELDEGKGKRFDCVTALMADLHEEN
SIO_010081: LDL57_RS17400
subclass of: SO_0000673
so part of: LDL57_RS17400
location: 38204..38470
location: region:38204-38470:1
so has part: feature:38204-38470:1:exon

WP_225507971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38204-38470:1:exon

LDL57_RS17405
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17405
old locus tag: LDL57_17405
so part of: sequence
location: 38457..38738
location: region:38457-38738:1
so has part: feature:38457-38738:1:exon
subclass of: SO_0000010

position:38457:1
position: 38457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38738:1
position: 38738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38457-38738:1:exon

LDL57_RS17405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17405
old locus tag: LDL57_17405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521176.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MRKIERSVTFKRDYKREAKGRHRNNLDKVLISVITSLVIDEPLKTSNRDHDLIGKWSGHRECHIKPDLLLIYRKPDSETLQLVRLGSHSQLFG
SIO_010081: LDL57_RS17405
subclass of: SO_0000673
so part of: LDL57_RS17405
location: 38457..38738
location: region:38457-38738:1
so has part: feature:38457-38738:1:exon

WP_225507972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38457-38738:1:exon

LDL57_RS17410
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17410
old locus tag: LDL57_17410
so part of: sequence
location: complement(38884..39489)
location: region:38884-39489:-1
so has part: feature:38884-39489:-1:exon
subclass of: SO_0000010

position:38884:-1
position: 38884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39489:-1
position: 39489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38884-39489:-1:exon

LDL57_RS17410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17410
old locus tag: LDL57_17410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009351668.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSRVFAYCRVSTLEQTTENQRREIEAAGFNIKPHRIVEENVSGSVAANERNGFVRLTDRLEPDDILVVTKLDRLGRNAIDIRKTVENLASLGVKVHCLALGGVDLTSPAGKMTMQVISAVAEFERDLLIERTQAGIVRAKAQGKKLGRPRSLDDKQREEVILHLKNGQSISSLAKIFNTTRQTIMRIRDAEFATAKYGVPA
SIO_010081: LDL57_RS17410
subclass of: SO_0000673
so part of: LDL57_RS17410
location: complement(38884..39489)
location: region:38884-39489:-1
so has part: feature:38884-39489:-1:exon

WP_180560436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38884-39489:-1:exon

LDL57_RS17415
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17415
old locus tag: LDL57_17415
so part of: sequence
location: complement(39617..40843)
location: region:39617-40843:-1
so has part: feature:39617-40843:-1:exon
subclass of: SO_0000010

position:39617:-1
position: 39617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40843:-1
position: 40843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39617-40843:-1:exon

LDL57_RS17415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17415
old locus tag: LDL57_17415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016257341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PBSX family phage terminase large subunit
translation: MTKEIAIDIPPKLTAVFNGSARYRCAYGGRGSGKTRTFALMLAVNAFNAARVGKKGVILCAREFMNSLEDSSMQEVKQAIQSVSWLNAFFDIGERYIRTKDKRISFVFCGLRHNLDSLKSKSSILFCWIDEAENVPEYAWQKLIPTVREEGSEIWVTWNPERKGSATDVRFRQKKPSNCISVDLNYNDNPWFPDVLEEERKNDRIRLDANTYAWIWEGAYLENSNKQVLNGKYDVVEFDHDLWKKADRLLFGADFGFSNDPSTLIRSFILGDCLYVEYEAYRVGVELDALPHFYQAIPEATRWPIKADNSRPETISYLKRQGFNIAPASKWNGSVEDGIAHLRGFKKIIIHPRCKHTIEEARLYSYKIDRNTGDVLPVIVDAHNHCWDAVRYSLDGYIKGSVSFLDTL
SIO_010081: LDL57_RS17415
subclass of: SO_0000673
so part of: LDL57_RS17415
location: complement(39617..40843)
location: region:39617-40843:-1
so has part: feature:39617-40843:-1:exon

WP_180560435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39617-40843:-1:exon

LDL57_RS17420
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17420
old locus tag: LDL57_17420
so part of: sequence
location: complement(40821..41120)
location: region:40821-41120:-1
so has part: feature:40821-41120:-1:exon
subclass of: SO_0000010

position:40821:-1
position: 40821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41120:-1
position: 41120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40821-41120:-1:exon

LDL57_RS17420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17420
old locus tag: LDL57_17420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSHNDIAVYKKMGINEVFFNEEKQQQKEYLRSILERKKTGEMTALEAAQFLEIEGIPVPNTLLLEIKQSSNFNESEDIFPSVIHVNAGSFSNDERNSN
SIO_010081: LDL57_RS17420
subclass of: SO_0000673
so part of: LDL57_RS17420
location: complement(40821..41120)
location: region:40821-41120:-1
so has part: feature:40821-41120:-1:exon

WP_225507973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40821-41120:-1:exon

LDL57_RS17425
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17425
old locus tag: LDL57_17425
so part of: sequence
location: complement(41227..41631)
location: region:41227-41631:-1
so has part: feature:41227-41631:-1:exon
subclass of: SO_0000010

position:41227:-1
position: 41227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41631:-1
position: 41631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41227-41631:-1:exon

LDL57_RS17425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17425
old locus tag: LDL57_17425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MQKYKINRSRHAAFLLHVHLVFVTKYRKKVLSGLHYKAFHQYAGEVCRDFGADLKESNGESDHVHMLIEYPPTVQLSVLVNSLKAVTSRRLRNEFLDLRGAYGKPVLWSRSYFAGSCGGAPLEVVKQYIQNQRG
SIO_010081: LDL57_RS17425
subclass of: SO_0000673
so part of: LDL57_RS17425
location: complement(41227..41631)
location: region:41227-41631:-1
so has part: feature:41227-41631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41227-41631:-1:exon

LDL57_RS17430
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17430
old locus tag: LDL57_17430
pseudo: true
so part of: sequence
location: 41690..42914
location: region:41690-42914:1
so has part: feature:41690-42914:1:exon
subclass of: SO_0000010

position:41690:1
position: 41690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42914:1
position: 42914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41690-42914:1:exon

LDL57_RS17430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17430
old locus tag: LDL57_17430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020308204.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LDL57_RS17430
subclass of: SO_0000673
so part of: LDL57_RS17430
location: 41690..42914
location: region:41690-42914:1
so has part: feature:41690-42914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41690-42914:1:exon

LDL57_RS17435
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17435
old locus tag: LDL57_17435
so part of: sequence
location: 43093..43299
location: region:43093-43299:1
so has part: feature:43093-43299:1:exon
subclass of: SO_0000010

position:43093:1
position: 43093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43299:1
position: 43299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43093-43299:1:exon

LDL57_RS17435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17435
old locus tag: LDL57_17435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKKYEKTVFYPYDARALAVEYLKRNDKELTPEEYISEILKLEETYKIRLETMSDNSCNFLDTVKKEK
SIO_010081: LDL57_RS17435
subclass of: SO_0000673
so part of: LDL57_RS17435
location: 43093..43299
location: region:43093-43299:1
so has part: feature:43093-43299:1:exon

WP_225507974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43093-43299:1:exon

LDL57_RS17440
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17440
old locus tag: LDL57_17440
so part of: sequence
location: complement(43283..43504)
location: region:43283-43504:-1
so has part: feature:43283-43504:-1:exon
subclass of: SO_0000010

position:43283:-1
position: 43283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43504:-1
position: 43504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43283-43504:-1:exon

LDL57_RS17440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17440
old locus tag: LDL57_17440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENKDNSTEKLVTIGDRKIDKEIAKYCLEKVEPAIFEVVTHLVKERCEKADVIEAAKTTAEAIVEGMTSIFPS
SIO_010081: LDL57_RS17440
subclass of: SO_0000673
so part of: LDL57_RS17440
location: complement(43283..43504)
location: region:43283-43504:-1
so has part: feature:43283-43504:-1:exon

WP_225507976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43283-43504:-1:exon

LDL57_RS17445
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17445
old locus tag: LDL57_17445
so part of: sequence
location: complement(43521..44060)
location: region:43521-44060:-1
so has part: feature:43521-44060:-1:exon
subclass of: SO_0000010

position:43521:-1
position: 43521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44060:-1
position: 44060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43521-44060:-1:exon

LDL57_RS17445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17445
old locus tag: LDL57_17445
inference: COORDINATES: protein motif:HMM:NF012529.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MHAHCRFENYHIFNAGQKNALNQSVSFAKNFGTGFGGFVFSGGCGTGKNHLAASIGYYLMSKGSSVLCITVADLMMRFRATYEKTAKVTEQQLLDELCKVDLLILDEIGIQYQHSENTKIIVNQLVDRRTSHKKPIGMLTNLNSEQIKQVLGDRVIDRLMMSNGIWLNFNWSSYRRKIQ
SIO_010081: LDL57_RS17445
subclass of: SO_0000673
so part of: LDL57_RS17445
location: complement(43521..44060)
location: region:43521-44060:-1
so has part: feature:43521-44060:-1:exon

WP_225507978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43521-44060:-1:exon

LDL57_RS17450
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17450
old locus tag: LDL57_17450
so part of: sequence
location: 44167..44490
location: region:44167-44490:1
so has part: feature:44167-44490:1:exon
subclass of: SO_0000010

position:44167:1
position: 44167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44490:1
position: 44490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44167-44490:1:exon

LDL57_RS17450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17450
old locus tag: LDL57_17450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKENYSLLLENKKLFIYSENENHEYEIRNKYSKHTYTGNYILKNIDYFPDLDTKDAILIAYNAGLNEGRKLSKKINEEIKLHNELKNKNYENNIINFNRLNYDSFR
SIO_010081: LDL57_RS17450
subclass of: SO_0000673
so part of: LDL57_RS17450
location: 44167..44490
location: region:44167-44490:1
so has part: feature:44167-44490:1:exon

WP_225507980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44167-44490:1:exon

LDL57_RS17455
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17455
old locus tag: LDL57_17455
so part of: sequence
location: complement(44467..45195)
location: region:44467-45195:-1
so has part: feature:44467-45195:-1:exon
subclass of: SO_0000010

position:44467:-1
position: 44467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45195:-1
position: 45195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44467-45195:-1:exon

LDL57_RS17455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17455
old locus tag: LDL57_17455
inference: COORDINATES: protein motif:HMM:NF024258.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase
translation: MKVIQLTDLHLFSDIHQELFGVNTYNSFNKIINHLLLKEGDCDAIIVTGDISQDETVPSYELALDLLKKLNKPIYYLQGNHDQKEKLNLVFSDLKPIDELCSPYWNFISADTVDYGKDSGFLSNDELNNLKNKICKNERNNIALIMHHHCLKLGTPLIDGCMLLNSNKLIEIIDKEKKIKLVICGHAHGNYKLTHKNFTLEVAPAVCFQWKKGTELPDVEKKIGYRKFYFFKDKYLSETIII
SIO_010081: LDL57_RS17455
subclass of: SO_0000673
so part of: LDL57_RS17455
location: complement(44467..45195)
location: region:44467-45195:-1
so has part: feature:44467-45195:-1:exon

WP_225507982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44467-45195:-1:exon

LDL57_RS17460
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17460
old locus tag: LDL57_17460
so part of: sequence
location: complement(45173..45892)
location: region:45173-45892:-1
so has part: feature:45173-45892:-1:exon
subclass of: SO_0000010

position:45173:-1
position: 45173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45892:-1
position: 45892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45173-45892:-1:exon

LDL57_RS17460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17460
old locus tag: LDL57_17460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012987515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VUT family protein
translation: MNRLIYKNDFKLYELFVGLTVTIMITCDTLVYKTFDFYPVKITASGIIFSLCYLLSAVTTEVYGYKLGTRIVWIIVLCQSFFVILVNLCSIYQADNNHISETYQSLFGEFWRVMLGTWISVPASYFCNGYIISRLKIYFKGRLFLVRYMLSAMIAQGILLITAYPISLSSKYSFFELINIISTTWIYKVIMSTLLLPIGILLARKVKKIEKIDTFDYNISYNPFNVFKQSSENESNTAH
SIO_010081: LDL57_RS17460
subclass of: SO_0000673
so part of: LDL57_RS17460
location: complement(45173..45892)
location: region:45173-45892:-1
so has part: feature:45173-45892:-1:exon

WP_225507984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45173-45892:-1:exon

LDL57_RS17465
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17465
old locus tag: LDL57_17465
so part of: sequence
location: complement(46186..46458)
location: region:46186-46458:-1
so has part: feature:46186-46458:-1:exon
subclass of: SO_0000010

position:46186:-1
position: 46186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46458:-1
position: 46458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46186-46458:-1:exon

LDL57_RS17465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17465
old locus tag: LDL57_17465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010617320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVKPNLKNFKDPTEFLENGAADKAESKYSANKIKKSDVIPTQQKIFRLPVDVVNELKLHVTKLQIESGKRITETDIIESLLRKYLNMSK
SIO_010081: LDL57_RS17465
subclass of: SO_0000673
so part of: LDL57_RS17465
location: complement(46186..46458)
location: region:46186-46458:-1
so has part: feature:46186-46458:-1:exon

WP_225507986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46186-46458:-1:exon

LDL57_RS17470
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17470
old locus tag: LDL57_17470
so part of: sequence
location: complement(46455..47084)
location: region:46455-47084:-1
so has part: feature:46455-47084:-1:exon
subclass of: SO_0000010

position:46455:-1
position: 46455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47084:-1
position: 47084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46455-47084:-1:exon

LDL57_RS17470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17470
old locus tag: LDL57_17470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918230.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIYGVVNTKGGVGKTTTSIHLAYMLSLEGKTLLIDGDPQESSASWAAWRREKQNYIPSPTTTCLTGKAILNEGKSLSENFDNVVVDVGGRDASGLRSALLLVDMAIIPIGSSSLDAAAISDLMDIIELAYEYNPKLITKVLLTRVDPRTKDNKDMLEFLSKQGLKVLANYVCERVSFRRAVGEGATVFEFGNDKLAIEEIEKVFKEIKS
SIO_010081: LDL57_RS17470
subclass of: SO_0000673
so part of: LDL57_RS17470
location: complement(46455..47084)
location: region:46455-47084:-1
so has part: feature:46455-47084:-1:exon

WP_225507988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46455-47084:-1:exon

LDL57_RS17475
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17475
old locus tag: LDL57_17475
so part of: sequence
location: complement(47334..48266)
location: region:47334-48266:-1
so has part: feature:47334-48266:-1:exon
subclass of: SO_0000010

position:47334:-1
position: 47334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48266:-1
position: 48266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47334-48266:-1:exon

LDL57_RS17475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17475
old locus tag: LDL57_17475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTDLTTKTRNNNLKTLRPPKHKQLEFFIADEVEIDSFRDEMASMEHPFFALKGGDTKTRIYKNGNITVIIESTSSGMATIFDKDVWIYAISKLQESMNKGEPISRVIAFTPYDFFITTNRDNGGRNYELLEKALSRLKGTVIKTNVVYSEEKKETISFGLIDSWSIVEDKKGKLDIGMIEVTLPDWLYQALHQKKMLKISPDYFRIRKAIDRRLYEIARKHCGNQGEFTIALEKLHLKTGSTALLKMFRHNLKKLAKTNDLPDYEVFFDPITDKVTFKNRNQNTPKAGASRKREKGKKEIFKIKNKLFEK
SIO_010081: LDL57_RS17475
subclass of: SO_0000673
so part of: LDL57_RS17475
location: complement(47334..48266)
location: region:47334-48266:-1
so has part: feature:47334-48266:-1:exon

WP_225507989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47334-48266:-1:exon

LDL57_RS17480
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17480
old locus tag: LDL57_17480
so part of: sequence
location: 48969..49241
location: region:48969-49241:1
so has part: feature:48969-49241:1:exon
subclass of: SO_0000010

position:48969:1
position: 48969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49241:1
position: 49241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48969-49241:1:exon

LDL57_RS17480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17480
old locus tag: LDL57_17480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003531811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKTELINKVSEKSGLAKKDAEKVVNAFAETITESLKSGNSVQLVGFGIFQVKTRAAREGRHPQTGKAIKIAASNIPSFKAGQKLKDAVN
SIO_010081: LDL57_RS17480
subclass of: SO_0000673
so part of: LDL57_RS17480
location: 48969..49241
location: region:48969-49241:1
so has part: feature:48969-49241:1:exon

WP_225507991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48969-49241:1:exon