Arsenophonus apicola strain ArsBeeUS plasmid pArsBee4, complete sequence.
type: Entry
definition: Arsenophonus apicola strain ArsBeeUS plasmid pArsBee4, complete sequence.
sequence version: NZ_CP084226.1
sequence date: 2022-09-04
sequence: sequence
division: CON
label: NZ_CP084226.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN21873137
keyword: RefSeq
source: Arsenophonus apicola
organism: Arsenophonus apicola
taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Morganellaceae; Arsenophonus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP084226.1.\nBacteria and source DNA available from Pol Nadal Jimenez, Institute\nof Infection, Veterinary and Ecological Sciences, University of\nLiverpool, Ic2 Liverpool Science Park, 146 Brownlow Hill,\nLiverpool, L3 5RF, UK.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Flye v. 2.8; Pilon v. 1.23\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 49.6x\nSequencing Technology :: Oxford Nanopore MinION; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/04/2022 11:51:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,553\nCDSs (total) :: 3,453\nGenes (coding) :: 3,222\nCDSs (with protein) :: 3,222\nGenes (RNA) :: 100\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 8\nPseudo Genes (total) :: 231\nCDSs (without protein) :: 231\nPseudo Genes (ambiguous residues) :: 0 of 231\nPseudo Genes (frameshifted) :: 136 of 231\nPseudo Genes (incomplete) :: 66 of 231\nPseudo Genes (internal stop) :: 64 of 231\nPseudo Genes (multiple problems) :: 33 of 231\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 50623
topology: circular
so has quality: SO_0000988
location: 1..50623
location: region:1-50623:1
RO_0002162: 2879119

NZ_CP084226
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN21873137
type: BioSample
SIO_000068: biosample

1
title: Culture and genomic analysis of Arsenophonus apicola sp. nov. isolated from the honeybee Apis mellifera
author: Nadal-Jimenez, P.
author: Siozios, S.
author: Frost, C.L.
author: Court, R.
author: Chrostek, E.
author: Drew, G.C.
author: Evans, J.D.
author: Hawthorne, D.J.
author: Burritt, J.B.
author: Hurst, G.D.D.
journal: Unpublished

2
title: Direct Submission
author: Siozios, S.
author: Frost, C.L.
author: Nadal-Jimenez, P.
author: Burritt, J.B.
author: Hurst, G.D.D.
journal: Submitted (27-SEP-2021) Evolution, Ecology and Behaviour, University of Liverpool, Crown Street, Biosciences building, Liverpool L69 7ZB, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50623:1
position: 50623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-50623:1:source
so part of: sequence
organism: Arsenophonus apicola
mol type: genomic DNA
strain: ArsBeeUS
isolation source: hemolymph
host: Apis mellifera
type material: type strain of Arsenophonus apicola
plasmid: pArsBee4
country: USA: Dunn County Wisconsin
lat lon: 44.952830 N 91.887010 W
collection date: 2016

2879119
type: Taxonomy
SIO_000068: taxonomy

LDL57_RS16915
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16915
old locus tag: LDL57_16915
so part of: sequence
location: complement(97..615)
location: region:97-615:-1
so has part: feature:97-615:-1:exon
subclass of: SO_0000010

position:97:-1
position: 97
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615:-1
position: 615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97-615:-1:exon

LDL57_RS16915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16915
old locus tag: LDL57_16915
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDEQRQKIAIKIYESTGVMYDKNDPVFALALINAEINKMLISDLEDKHQCLINAIEELPTKIEASLEKLIVGLEEAEKSYTEINVKHRNILNNQLDEAKLEIRCAIKNEITGGISEAISHAKKQLNQLGNQVEDVSTNCSFVNDKSWVAIIITSTALIISICFNAIAYIFR
SIO_010081: LDL57_RS16915
subclass of: SO_0000673
so part of: LDL57_RS16915
location: complement(97..615)
location: region:97-615:-1
so has part: feature:97-615:-1:exon

WP_225507924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97-615:-1:exon

LDL57_RS16920
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16920
old locus tag: LDL57_16920
so part of: sequence
location: complement(648..1424)
location: region:648-1424:-1
so has part: feature:648-1424:-1:exon
subclass of: SO_0000010

position:648:-1
position: 648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424:-1
position: 1424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648-1424:-1:exon

LDL57_RS16920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16920
old locus tag: LDL57_16920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019923820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraL
translation: MNTKAEKMTNEKTDTLDNHSIHFVLQGKGGIGKSLISSSLSQYFKSKFGAVKPFDTDQENTTLLHYKSLEVEHIPLMNQSRVIDAKNFDVLMEKLIGSDECCVIDNGANTFSPLLAYLIENDGFEILRESGKKVYIHTVIGGGDTLVDTATGFNSIAEGVTNTPIILWLNEHFGALSLPTGEKLEELKVYKKNENRLAGIIVLHHRNHQTFGDDIKRMNANRLTLTEVLQSPTFSLMEKQRLKTVFNAIFHQLDTINW
SIO_010081: LDL57_RS16920
subclass of: SO_0000673
so part of: LDL57_RS16920
location: complement(648..1424)
location: region:648-1424:-1
so has part: feature:648-1424:-1:exon

WP_225507772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:648-1424:-1:exon

LDL57_RS16925
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16925
old locus tag: LDL57_16925
so part of: sequence
location: complement(1427..1798)
location: region:1427-1798:-1
so has part: feature:1427-1798:-1:exon
subclass of: SO_0000010

position:1427:-1
position: 1427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798:-1
position: 1798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427-1798:-1:exon

LDL57_RS16925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16925
old locus tag: LDL57_16925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMTKDELVEKVKPFAVEMVNTLASKQHVFNKYLSTIIDCKNEGVPNKLIVDAINLHLNQNTKITLQYFKNLLFRSGYKKHPKSPLIKDEISNKNPKRFGNFQIPEEKTFKHNPQSDNELFTKE
SIO_010081: LDL57_RS16925
subclass of: SO_0000673
so part of: LDL57_RS16925
location: complement(1427..1798)
location: region:1427-1798:-1
so has part: feature:1427-1798:-1:exon

WP_180558371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1427-1798:-1:exon

LDL57_RS16930
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16930
old locus tag: LDL57_16930
so part of: sequence
location: complement(2124..2435)
location: region:2124-2435:-1
so has part: feature:2124-2435:-1:exon
subclass of: SO_0000010

position:2124:-1
position: 2124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2435:-1
position: 2435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2124-2435:-1:exon

LDL57_RS16930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16930
old locus tag: LDL57_16930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKPEEKRNDSYFVKLQLDDGSVKTLWGVGLEDAVAGLETNEPIRLEDKGVTPVKWTETQADGKSVNKSGERRIWQATPIDRHHENETETPQSDADYDGPEVA
SIO_010081: LDL57_RS16930
subclass of: SO_0000673
so part of: LDL57_RS16930
location: complement(2124..2435)
location: region:2124-2435:-1
so has part: feature:2124-2435:-1:exon

WP_225507926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2124-2435:-1:exon

LDL57_RS16935
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16935
old locus tag: LDL57_16935
so part of: sequence
location: complement(2449..2859)
location: region:2449-2859:-1
so has part: feature:2449-2859:-1:exon
subclass of: SO_0000010

position:2449:-1
position: 2449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2859:-1
position: 2859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2449-2859:-1:exon

LDL57_RS16935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16935
old locus tag: LDL57_16935
inference: COORDINATES: protein motif:HMM:NF037421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFVDTGNAITVRKAAMTDSALMVALTLAKEKFGSTLTIKGSQKFKDQIIEVVAKNNLDIHFTDKGMNQQLAARKAELAIEKTGQRIERPNNTADTEKTTPENQKAASDEPEKATQSDSTDKLNVLKAIWLNTAQPL
SIO_010081: LDL57_RS16935
subclass of: SO_0000673
so part of: LDL57_RS16935
location: complement(2449..2859)
location: region:2449-2859:-1
so has part: feature:2449-2859:-1:exon

WP_255653936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2449-2859:-1:exon

LDL57_RS16940
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16940
old locus tag: LDL57_16940
so part of: sequence
location: complement(2901..3656)
location: region:2901-3656:-1
so has part: feature:2901-3656:-1:exon
subclass of: SO_0000010

position:2901:-1
position: 2901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3656:-1
position: 3656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2901-3656:-1:exon

LDL57_RS16940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16940
old locus tag: LDL57_16940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSDLSGAGRRRKYTDADWFTRIPSLTESLERAGYRIRAGIGGVDAVSLTLPPYALNCHAVATFEQIQQRGERLFQQKNGQKKSTVVSSVRRVMPKTNKNASHVAAYFLRRATENRIEPAHRYAIHAIDNQFFTVRRTIMRDARLTRKEKSQFLSVLTFERLKAHHAIRHPNLPFEMEKPDMNSKTVRQLIPSSRTPDNSISGAVPDDRAMPAKSRFELFIRHLQAQLERKAQIMRNAQSRRSIFTPSEQS
SIO_010081: LDL57_RS16940
subclass of: SO_0000673
so part of: LDL57_RS16940
location: complement(2901..3656)
location: region:2901-3656:-1
so has part: feature:2901-3656:-1:exon

WP_225507928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2901-3656:-1:exon

LDL57_RS16945
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16945
old locus tag: LDL57_16945
pseudo: true
so part of: sequence
location: complement(<3620..3871)
location: region:3620-3871:-1
so has part: feature:3620-3871:-1:exon
subclass of: SO_0000010

position:3620:-1
position: 3620
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:3871:-1
position: 3871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3620-3871:-1:exon

LDL57_RS16945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16945
old locus tag: LDL57_16945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007247727.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: LDL57_RS16945
subclass of: SO_0000673
so part of: LDL57_RS16945
location: complement(<3620..3871)
location: region:3620-3871:-1
so has part: feature:3620-3871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3620-3871:-1:exon

LDL57_RS16950
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16950
old locus tag: LDL57_16950
so part of: sequence
location: complement(4858..5202)
location: region:4858-5202:-1
so has part: feature:4858-5202:-1:exon
subclass of: SO_0000010

position:4858:-1
position: 4858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5202:-1
position: 5202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4858-5202:-1:exon

LDL57_RS16950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16950
old locus tag: LDL57_16950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001749339.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MSKLKDKVVAFRLSQEDFAHFEEKLLKSQMTKSAFFREVFLQANVNLTVQSLPSKELRHLTFLYNKASNNLNQIAHQVNIAHLTQKVSERLYRQVNNGLIDIRELLLSGVHDVN
SIO_010081: LDL57_RS16950
subclass of: SO_0000673
so part of: LDL57_RS16950
location: complement(4858..5202)
location: region:4858-5202:-1
so has part: feature:4858-5202:-1:exon

WP_180558369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4858-5202:-1:exon

LDL57_RS16955
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16955
old locus tag: LDL57_16955
so part of: sequence
location: complement(5285..7453)
location: region:5285-7453:-1
so has part: feature:5285-7453:-1:exon
subclass of: SO_0000010

position:5285:-1
position: 5285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7453:-1
position: 7453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5285-7453:-1:exon

LDL57_RS16955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16955
old locus tag: LDL57_16955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020313368.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IA DNA topoisomerase
translation: MNLYIAEKPAVAKDIAKALGGNFQKKDGYLESADNVVTWCYGHLLKSIEPEAYNSTYAQWKAEDLPLQLYPLRYEPIAGKEGHTQTVINLIKRADVIVHAGDPDDEGQLLVEELLEYAGNQKPVKRLLINDNTDAAVKKALAQLKDNHQFKGVYRKALARAAGDLIYGLSMTRAYTIEGRKNGYRGVLSVGRVQTPILGLIVRRYLANQSHTPSFYYSLVGDFLVNGQQFSANWKVNENAPQDDKKRLTSKRYADDLAARLRCKDADIKAAGVQEKETSPPLPFNLVRLQQTMNRQHKMTAAKTLEITQQLREKYKAITYNRSDCSYLSDEQFNEAPQVLEALQGISDFNGLSLVTSQKSKAFDSGKVTAHTAIIPTANVLVLTALSEHERLVYLAIAQHYLVQFMHNKRYLEASVVVEVDGETFSARATKTVDAGFSAFLKGDASDVSDEVMPDSAFEVLQALRTGQRGNCDAVTVNEKKTTPPPLFTEATLLAALVRVADFVEDEKIKKLLKDKDKDKKDEHGGIGTPATRSDMLEKLKNRQFIREEKGKLLPTETGVAFFRALPESATLPDMTALWSAQQSDIEQGNQTVDEFVNALFDDLRQLVNTVSVGEIKGEVKPNSGQVERLTTPCPNCGKDIVVRPKLFACTGCDFKIWGTVAEKKLTAKQVETLIQKGKTGIIKGFKSKAGKTFDAMLILQDKPTGKVGFEFNRTVPCRKRF
SIO_010081: LDL57_RS16955
subclass of: SO_0000673
so part of: LDL57_RS16955
location: complement(5285..7453)
location: region:5285-7453:-1
so has part: feature:5285-7453:-1:exon

WP_225507930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5285-7453:-1:exon

LDL57_RS17875
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17875
so part of: sequence
location: complement(7827..8120)
location: region:7827-8120:-1
so has part: feature:7827-8120:-1:exon
subclass of: SO_0000010

position:7827:-1
position: 7827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8120:-1
position: 8120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7827-8120:-1:exon

LDL57_RS17875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17875
inference: COORDINATES: protein motif:HMM:NF040300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6012 family protein
translation: MHFHILDSDFDAITSEIMMWNAFYDTPFLSRKSEIHENWLPATNQPRMLPILENKKESQREQQRLIYNLVSDDGFINERTEFFPIPTIESQRITVPF
SIO_010081: LDL57_RS17875
subclass of: SO_0000673
so part of: LDL57_RS17875
location: complement(7827..8120)
location: region:7827-8120:-1
so has part: feature:7827-8120:-1:exon

WP_255653937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7827-8120:-1:exon

LDL57_RS17880
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17880
so part of: sequence
location: complement(8177..8392)
location: region:8177-8392:-1
so has part: feature:8177-8392:-1:exon
subclass of: SO_0000010

position:8177:-1
position: 8177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8392:-1
position: 8392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8177-8392:-1:exon

LDL57_RS17880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17880
inference: COORDINATES: protein motif:HMM:NF040300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6012 family protein
translation: MLLHLSPRYYLRYSDVQLDLIDVSVPELNLTLKGGVDIVARTPYPNKCYQIACRKKGRKAINGIFIETDKN
SIO_010081: LDL57_RS17880
subclass of: SO_0000673
so part of: LDL57_RS17880
location: complement(8177..8392)
location: region:8177-8392:-1
so has part: feature:8177-8392:-1:exon

WP_255653935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8177-8392:-1:exon

LDL57_RS16965
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16965
old locus tag: LDL57_16965
so part of: sequence
location: complement(8413..8694)
location: region:8413-8694:-1
so has part: feature:8413-8694:-1:exon
subclass of: SO_0000010

position:8413:-1
position: 8413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8694:-1
position: 8694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8413-8694:-1:exon

LDL57_RS16965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16965
old locus tag: LDL57_16965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001505436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTDKVIADIGAEITVKDPDLYDRISNYVLLHGEDLQGMFKDEKYLYMSCFIRDVRAFRNEFELEERLKPLFSLGKGDADEFVISFPSKLNPA
SIO_010081: LDL57_RS16965
subclass of: SO_0000673
so part of: LDL57_RS16965
location: complement(8413..8694)
location: region:8413-8694:-1
so has part: feature:8413-8694:-1:exon

WP_225507931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8413-8694:-1:exon

LDL57_RS16970
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16970
old locus tag: LDL57_16970
so part of: sequence
location: complement(8775..9086)
location: region:8775-9086:-1
so has part: feature:8775-9086:-1:exon
subclass of: SO_0000010

position:8775:-1
position: 8775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9086:-1
position: 9086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8775-9086:-1:exon

LDL57_RS16970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16970
old locus tag: LDL57_16970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009635187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKTFLSAAWLLLAASYPLSAQEKIDSDDPCTVVLCMYGKLQGNNQSECNGAVRKFFSLKKFGRHGFRPWKTFVKRRDFLGGCPTADPAVVSDIMKQFGKMRG
SIO_010081: LDL57_RS16970
subclass of: SO_0000673
so part of: LDL57_RS16970
location: complement(8775..9086)
location: region:8775-9086:-1
so has part: feature:8775-9086:-1:exon

WP_180559739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8775-9086:-1:exon

LDL57_RS16975
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16975
old locus tag: LDL57_16975
so part of: sequence
location: 9164..9691
location: region:9164-9691:1
so has part: feature:9164-9691:1:exon
subclass of: SO_0000010

position:9164:1
position: 9164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9691:1
position: 9691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9164-9691:1:exon

LDL57_RS16975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16975
old locus tag: LDL57_16975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004929670.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipocalin family protein
translation: MKILRNLYLLISSLLSLSCSVSAPKGVKAVENFDLNQYLGLWYEIARLDNRFERGLERVTANYMLNPDGSVKVINRGFLPELHQWRKSIGKAKFIGSPKKGSLKVSFFWPFYGGYHVIALHPEYRYALVAGPSRNYLWLLSRTPRLETAETESLLNLARELNFPVDKLIWVNQDA
SIO_010081: LDL57_RS16975
subclass of: SO_0000673
so part of: LDL57_RS16975
location: 9164..9691
location: region:9164-9691:1
so has part: feature:9164-9691:1:exon

WP_180559725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9164-9691:1:exon

LDL57_RS16980
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16980
old locus tag: LDL57_16980
so part of: sequence
location: complement(9698..10957)
location: region:9698-10957:-1
so has part: feature:9698-10957:-1:exon
subclass of: SO_0000010

position:9698:-1
position: 9698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10957:-1
position: 10957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9698-10957:-1:exon

LDL57_RS16980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16980
old locus tag: LDL57_16980
inference: COORDINATES: protein motif:HMM:NF016785.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shufflon system plasmid conjugative transfer pilus tip adhesin PilV
translation: MSKIHQNRIKEIDRGFIALEVLGVLVIMALLALWGAEKYSEFLEEQEWIVSARHFSEFNEAAKHYIADHYDELLTQPKSTLNNALLIKKGYLQKGFSDKNPFGQQYVTGIVRNNQKRPPALQALTCSVNGENLTEKGMRRIAAQINGMGGFVDERNLAIGAYGGWISQPKDFGLDCRFGHIAIALSSEILGSVLQESDRLYRFQVKHKPELNRMHTHIDMGGNNLNNANAVNAKEGVFSKTVTANGDIKSQGGWLVTQDNKGWINTKHGGGFYMTDKEWIRAVNNKSIYTGGQLKGGTVRAEGRLSTGDFLQLEKVVVEGSSCPTSGLVSRDAKGAVLSCQTGRWTKTTGLGPVSYHKTNSGAKNIGSHEFCAIAGFNLPGQYFSNVACHVKPDEHKNWILSGSPPSFVHFQCEAICIN
SIO_010081: LDL57_RS16980
subclass of: SO_0000673
so part of: LDL57_RS16980
location: complement(9698..10957)
location: region:9698-10957:-1
so has part: feature:9698-10957:-1:exon

WP_225507933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9698-10957:-1:exon

LDL57_RS16985
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16985
old locus tag: LDL57_16985
so part of: sequence
location: 11345..11623
location: region:11345-11623:1
so has part: feature:11345-11623:1:exon
subclass of: SO_0000010

position:11345:1
position: 11345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11623:1
position: 11623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11345-11623:1:exon

LDL57_RS16985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16985
old locus tag: LDL57_16985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MPQIPVENNDRMSLRIASEEKSLLIRAAALQHTNLTEFVLRNVLSVARKIIDENERLNLTRRDSLHVMELLDNPPAPNDKLMAAAFALPKKS
SIO_010081: LDL57_RS16985
subclass of: SO_0000673
so part of: LDL57_RS16985
location: 11345..11623
location: region:11345-11623:1
so has part: feature:11345-11623:1:exon

WP_225507762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11345-11623:1:exon

LDL57_RS16990
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16990
old locus tag: LDL57_16990
so part of: sequence
location: 11620..12144
location: region:11620-12144:1
so has part: feature:11620-12144:1:exon
subclass of: SO_0000010

position:11620:1
position: 11620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12144:1
position: 12144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11620-12144:1:exon

LDL57_RS16990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16990
old locus tag: LDL57_16990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTLPIWHEEPIGKKHNRGDFNCGNEVLNQFLYRHARQNHEKGGAKTYLAVNEHNEKILGYYCLSPASIAYEDVPEVIKRGLARHDVPVFRLGRLAVDFSVQGLGLGGQLLLAAGRRCLLVATQVGGVALVIDAKNERVAQWYASYGAIPLLDAKSTLMLPFKTLHAALSAAGKL
SIO_010081: LDL57_RS16990
subclass of: SO_0000673
so part of: LDL57_RS16990
location: 11620..12144
location: region:11620-12144:1
so has part: feature:11620-12144:1:exon

WP_225507760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11620-12144:1:exon

LDL57_RS16995
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16995
old locus tag: LDL57_16995
pseudo: true
so part of: sequence
location: <12187..12285
location: region:12187-12285:1
so has part: feature:12187-12285:1:exon
subclass of: SO_0000010

position:12187:1
position: 12187
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:12285:1
position: 12285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12187-12285:1:exon

LDL57_RS16995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16995
old locus tag: LDL57_16995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016232708.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: LDL57_RS16995
subclass of: SO_0000673
so part of: LDL57_RS16995
location: <12187..12285
location: region:12187-12285:1
so has part: feature:12187-12285:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12187-12285:1:exon

LDL57_RS17000
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17000
old locus tag: LDL57_17000
so part of: sequence
location: complement(12418..12675)
location: region:12418-12675:-1
so has part: feature:12418-12675:-1:exon
subclass of: SO_0000010

position:12418:-1
position: 12418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12675:-1
position: 12675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12418-12675:-1:exon

LDL57_RS17000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17000
old locus tag: LDL57_17000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005785501.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacteriocin immunity protein
translation: MKDSISDYTEAEFLEFIRDIYKENMAETDDKLDLLLSHFEKITEHPDGSDLIYYAKSDLESTPEAITRIIKEWRAQNGKPGFKPE
SIO_010081: LDL57_RS17000
subclass of: SO_0000673
so part of: LDL57_RS17000
location: complement(12418..12675)
location: region:12418-12675:-1
so has part: feature:12418-12675:-1:exon

WP_225507935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12418-12675:-1:exon

LDL57_RS17005
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17005
old locus tag: LDL57_17005
so part of: sequence
location: complement(12675..15335)
location: region:12675-15335:-1
so has part: feature:12675-15335:-1:exon
subclass of: SO_0000010

position:15335:-1
position: 15335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12675-15335:-1:exon

LDL57_RS17005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17005
old locus tag: LDL57_17005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126733.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-type pyocin domain-containing protein
translation: MKITHTPISYPSYLNEDKNKTEKDENNPANTPSSYEVAPEKSDEESRGNTGFQPDYLLHQQRQKERILSTVDNQKKRVKRGADDVIVVRASPVTPLNPLSGFSSLENLYPTFGNPAFDYAIKQEAFMKGKLNEEENHARTLLKKSNSLAIIGNSAQIAPVLSSAGAGSLVLTNPSGVSLLNQFTNAINTLNASASRLLSSAAANLAPLSAAADTAAMAVSRGFVVASILYPPKAGEGSDLAQGKTLDQFLSLSIPAKTIGLNDKQQLHQATTTGEIALPVRGRLVMSNDKVEVMAVRPQNATPVKVISAVKDAASGLYVHSLPKTNAQSASIQVVTAPSITSSLEGQPPLVSSLPRTPVSVRSPFSDATQISASGAIPFQDAILVYPEAANMEPVYVMYGARSQNTIEQAQKGLAIANQSLATLNRQYQTELAALNKLKATPEGRTLSNPAKYPLTYQQSSQQLSKTQRIIAIKDKSLVDILLGKGISAYSTEVMKRENSKASFNNVPGIVITKDAYENLGRRLLDTNKKISQQTTRLQTFTTSRQQAQARITAAEAKLKNELNQLLTANQGIKSPNNPYYPPPATQLLTDYLGLQASPAKTPLDDGVSQKPRWTNTTGDTIYEWNSLNGSLETYKPGHWETEIGKGGKEARVWVVESVINPATGLYGITLPDEQGNQGRTILISPINAPGTQGLGPLLHPEKQQVVILNTGNNQPVKTPIVRVYPNLIPPDVETPVTVPPLENGYQPLYVMFNNPRYLPGVVTGNGKAITGIWLDKAGDELGAPIPSQIADKLRGKEFASFDQFRKTFWQEVAKDPELSGQFIKGNRDRMQVGKAPKSRKKDTVGERSSFELHHIKYIKDNGAVYDIDNLRVITPKQHINIHRGK
SIO_010081: LDL57_RS17005
subclass of: SO_0000673
so part of: LDL57_RS17005
location: complement(12675..15335)
location: region:12675-15335:-1
so has part: feature:12675-15335:-1:exon

WP_225507937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12675-15335:-1:exon

LDL57_RS17010
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17010
old locus tag: LDL57_17010
so part of: sequence
location: complement(15393..15908)
location: region:15393-15908:-1
so has part: feature:15393-15908:-1:exon
subclass of: SO_0000010

position:15393:-1
position: 15393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15908:-1
position: 15908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15393-15908:-1:exon

LDL57_RS17010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17010
old locus tag: LDL57_17010
inference: COORDINATES: protein motif:HMM:NF013632.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A24 family peptidase
translation: MSALGCPTITHTLFSLIFYAFLALFFYLDAASRCLPRCFTLAFGLIGISFRFLLYQETVLLALLSALSVFGMLWGLRTLTFRQDGHAKFGLGDIYLMAGLGVWLSLTIVLWVIIGAVFLAGFVLLVRRLRYPKRWQQDDDFRYLPFAPFLCSVVAFYALNSDVTLNYWFFL
SIO_010081: LDL57_RS17010
subclass of: SO_0000673
so part of: LDL57_RS17010
location: complement(15393..15908)
location: region:15393-15908:-1
so has part: feature:15393-15908:-1:exon

WP_225507729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15393-15908:-1:exon

LDL57_RS17015
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17015
old locus tag: LDL57_17015
so part of: sequence
location: complement(16055..16489)
location: region:16055-16489:-1
so has part: feature:16055-16489:-1:exon
subclass of: SO_0000010

position:16055:-1
position: 16055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16489:-1
position: 16489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16055-16489:-1:exon

LDL57_RS17015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17015
old locus tag: LDL57_17015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873682.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MTFWLAICLSRTAQAFCFNEAGALYQIDPKLLKVIAQQESSLSAKAVNHNRDKQGRVLSVDYGLMQVNSVHIPKLKKLGIITDYQDLLSKPCLNVKIGAWILAQHLQRCGVNWHCLGSYNAGFHPRSQHKRLRYAKLIYQRYVQ
SIO_010081: LDL57_RS17015
subclass of: SO_0000673
so part of: LDL57_RS17015
location: complement(16055..16489)
location: region:16055-16489:-1
so has part: feature:16055-16489:-1:exon

WP_225507955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16055-16489:-1:exon

LDL57_RS17020
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17020
old locus tag: LDL57_17020
so part of: sequence
location: 16648..16815
location: region:16648-16815:1
so has part: feature:16648-16815:1:exon
subclass of: SO_0000010

position:16648:1
position: 16648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16815:1
position: 16815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16648-16815:1:exon

LDL57_RS17020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17020
old locus tag: LDL57_17020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAFSAVTTPTLLLPEIETSFNSVLLLSFVAICSGQVNLAWTSLIIMIIININDK
SIO_010081: LDL57_RS17020
subclass of: SO_0000673
so part of: LDL57_RS17020
location: 16648..16815
location: region:16648-16815:1
so has part: feature:16648-16815:1:exon

WP_225507939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16648-16815:1:exon

LDL57_RS17025
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17025
old locus tag: LDL57_17025
so part of: sequence
location: 16832..17389
location: region:16832-17389:1
so has part: feature:16832-17389:1:exon
subclass of: SO_0000010

position:16832:1
position: 16832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17389:1
position: 17389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16832-17389:1:exon

LDL57_RS17025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17025
old locus tag: LDL57_17025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008314477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron transporter
translation: MKPVYYTVILGFLLFSIKIFSQEYPLGKPIIKEGMEIQGVYLQPITMDTPKVNHAMSHLSADKADIHLEADIHAVEENPNGFAEGDWIPYLSIEYTITKLGVKQQSQSGIFMPMVASDGPHYGENIKLYGPGKYRVTYRIYSPSYNKQVTFGRHIDKETGVAPWFKPFEVSWDFQYAGIGRKGSY
SIO_010081: LDL57_RS17025
subclass of: SO_0000673
so part of: LDL57_RS17025
location: 16832..17389
location: region:16832-17389:1
so has part: feature:16832-17389:1:exon

WP_225507941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16832-17389:1:exon

LDL57_RS17030
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17030
old locus tag: LDL57_17030
so part of: sequence
location: 17475..17813
location: region:17475-17813:1
so has part: feature:17475-17813:1:exon
subclass of: SO_0000010

position:17475:1
position: 17475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17813:1
position: 17813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17475-17813:1:exon

LDL57_RS17030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17030
old locus tag: LDL57_17030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006661035.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupredoxin domain-containing protein
translation: MKTLLSFFLLVFYVLPPTRVFAAEKFTVELEMKNGDLIPRMLKVPSRTIIRIKITNTGTEPSEFESVQLRKEKVLAPGASSVLVIAPLKPGTYTFFDDFHLSFPKGEITAIE
SIO_010081: LDL57_RS17030
subclass of: SO_0000673
so part of: LDL57_RS17030
location: 17475..17813
location: region:17475-17813:1
so has part: feature:17475-17813:1:exon

WP_225507943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17475-17813:1:exon

LDL57_RS17035
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17035
old locus tag: LDL57_17035
so part of: sequence
location: 17823..18656
location: region:17823-18656:1
so has part: feature:17823-18656:1:exon
subclass of: SO_0000010

position:17823:1
position: 17823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18656:1
position: 18656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17823-18656:1:exon

LDL57_RS17035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17035
old locus tag: LDL57_17035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008910114.1
GO component: GO:0033573 - high-affinity iron permease complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005381 - iron ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0034755 - iron ion transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FTR1 family protein
translation: MGQVLFVVWRESFEALLVIGIIYTWVKRHPDADNGIKFLWIGVFLGIAVSILLALVLYGVFNVLSDTSQSLFMVLMEVFACILIIQMVYWMNNQGSSIKSEIESSIKNKIDRHNWWGVTLIITIAIAREGSEIVVFLSSFIMSLTSTTASGFFFEVAGGILIASLTLYAFLLTNRFMSWHIFFKVTGVILLFLSLSLLLKGVEEGVNLLIVFDYSIPEFLIYPAWNTSALLDESGIIGNFISSFFAYRSQPIWLSVITFIFYWIFVVTLFLWNRKYG
SIO_010081: LDL57_RS17035
subclass of: SO_0000673
so part of: LDL57_RS17035
location: 17823..18656
location: region:17823-18656:1
so has part: feature:17823-18656:1:exon

WP_225507945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17823-18656:1:exon

LDL57_RS17040
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17040
old locus tag: LDL57_17040
so part of: sequence
location: 18649..19548
location: region:18649-19548:1
so has part: feature:18649-19548:1:exon
subclass of: SO_0000010

position:18649:1
position: 18649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19548:1
position: 19548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18649-19548:1:exon

LDL57_RS17040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17040
old locus tag: LDL57_17040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008910113.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EfeM/EfeO family lipoprotein
translation: MGSFVNQALMIICSFMSFYGIPTSASVKELRSPEQTGKDIIIAKGNIPTPKKYHLAIETYLDFVSTETNNMILELEFLEKKLKTGEVKKAEQAYIQAHQHYEAIRPIVILFGNTDRTINAREDYFLHGVKDYRFMGFHLVEYQLFDRKNIKAALEATDKLLIKSRDLKKRISADNIDIINLVQASVYFIEMILETKLAGKENIYSLSDLNDVAANLRGSKEVVSVLTPFIMKKTLRQILHNFEKSNNILSNYQLSKGRYKPYSQLSTKDKMTLYSILSQQAELLAVLRTQLDVNVYHKY
SIO_010081: LDL57_RS17040
subclass of: SO_0000673
so part of: LDL57_RS17040
location: 18649..19548
location: region:18649-19548:1
so has part: feature:18649-19548:1:exon

WP_225507947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18649-19548:1:exon

LDL57_RS17045
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
gene: efeB
locus tag: LDL57_RS17045
old locus tag: LDL57_17045
so part of: sequence
location: 19561..20835
location: region:19561-20835:1
so has part: feature:19561-20835:1:exon
subclass of: SO_0000010

position:19561:1
position: 19561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20835:1
position: 20835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19561-20835:1:exon

LDL57_RS17045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
gene: efeB
locus tag: LDL57_RS17045
old locus tag: LDL57_17045
EC number: 4.98.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008910112.1
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO process: GO:0033212 - iron import into cell [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron uptake transporter deferrochelatase/peroxidase subunit
translation: MQIKHNYKYTSFNFSRRNALKTLAFGSVAFASPTLALKQSKENCHSSYDKAIPFKGFHQSGVLTPEQKNSSFIAFKVTASTLEELQSLFKILTQRINYLTQVQKLTTNQNDKIPPIDSGILGSYLKPDSLTVTISLGNSLFDSHFGLKKIKPNFLTDMTSFPNDRLKSEWCGGDVLLQICANSQESVIYALRDILRHTSAYLFPLWKIDGFLPSRNIDQHLTPINLFGFKDGTGNAPNDDDELMDKMVWVTEGDSEPLWCKGGSYQAVRLIRFNLEFWDRTPLEDQENHFGRHKETGAPIGKKQEMESPGFEKDPHGDRILFDSHMRRAEPRNPERYTAKLRRRSYSYSLGINGNGLLDMGLIFVSYQKNLKTGFINTQKRLNGEPLERYIKPFGGGYYFVLPGIQHDQNFFAQSMFEALKFYP
SIO_010081: LDL57_RS17045
subclass of: SO_0000673
so part of: LDL57_RS17045
location: 19561..20835
location: region:19561-20835:1
so has part: feature:19561-20835:1:exon

WP_225507949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19561-20835:1:exon

LDL57_RS17050
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17050
old locus tag: LDL57_17050
pseudo: true
so part of: sequence
location: complement(20932..>21092)
location: region:20932-21092:-1
so has part: feature:20932-21092:-1:exon
subclass of: SO_0000010

position:20932:-1
position: 20932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21092:-1
position: 21092
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20932-21092:-1:exon

LDL57_RS17050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17050
old locus tag: LDL57_17050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612135.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LDL57_RS17050
subclass of: SO_0000673
so part of: LDL57_RS17050
location: complement(20932..>21092)
location: region:20932-21092:-1
so has part: feature:20932-21092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20932-21092:-1:exon

LDL57_RS17055
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17055
old locus tag: LDL57_17055
pseudo: true
so part of: sequence
location: complement(<21225..>21570)
location: region:21225-21570:-1
so has part: feature:21225-21570:-1:exon
subclass of: SO_0000010

position:21225:-1
position: 21225
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:21570:-1
position: 21570
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21225-21570:-1:exon

LDL57_RS17055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17055
old locus tag: LDL57_17055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016713586.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
SIO_010081: LDL57_RS17055
subclass of: SO_0000673
so part of: LDL57_RS17055
location: complement(<21225..>21570)
location: region:21225-21570:-1
so has part: feature:21225-21570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21225-21570:-1:exon

LDL57_RS17060
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17060
old locus tag: LDL57_17060
pseudo: true
so part of: sequence
location: complement(21646..22062)
location: region:21646-22062:-1
so has part: feature:21646-22062:-1:exon
subclass of: SO_0000010

position:21646:-1
position: 21646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22062:-1
position: 22062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21646-22062:-1:exon

LDL57_RS17060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17060
old locus tag: LDL57_17060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005720092.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
SIO_010081: LDL57_RS17060
subclass of: SO_0000673
so part of: LDL57_RS17060
location: complement(21646..22062)
location: region:21646-22062:-1
so has part: feature:21646-22062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21646-22062:-1:exon

LDL57_RS17065
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17065
old locus tag: LDL57_17065
pseudo: true
so part of: sequence
location: 22085..>22513
location: region:22085-22513:1
so has part: feature:22085-22513:1:exon
subclass of: SO_0000010

position:22085:1
position: 22085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22513:1
position: 22513
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22085-22513:1:exon

LDL57_RS17065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17065
old locus tag: LDL57_17065
inference: COORDINATES: similar to AA sequence:RefSeq:NP_415949.3
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: LDL57_RS17065
subclass of: SO_0000673
so part of: LDL57_RS17065
location: 22085..>22513
location: region:22085-22513:1
so has part: feature:22085-22513:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22085-22513:1:exon

LDL57_RS17070
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17070
old locus tag: LDL57_17070
so part of: sequence
location: complement(23270..24040)
location: region:23270-24040:-1
so has part: feature:23270-24040:-1:exon
subclass of: SO_0000010

position:23270:-1
position: 23270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24040:-1
position: 24040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23270-24040:-1:exon

LDL57_RS17070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17070
old locus tag: LDL57_17070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007969325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: intradiol ring-cleavage dioxygenase
translation: MKSRRILLKYIITAIGFSSISSYIKNSYAFLNKNYILGDNLFCKKTPEQIPGPYYRNLTLVRRHIIDSQEGIPLLIKFRVVDVLKNCEPVENLCVNIWHCNSEGHYSGWDFINPNLEVMSDDIGSVPRTDEKNFLRGSQLTDSSGFVRFTTIYPGFYAGRATHIHFTITECLEKKEEVLVSQLYFPEDMNIEVYKSKYYPSREINRINNMEDDYYKNMNGRKLVLNIKKLSNDINDGLFGEMTIYINSNEKSLTYN
SIO_010081: LDL57_RS17070
subclass of: SO_0000673
so part of: LDL57_RS17070
location: complement(23270..24040)
location: region:23270-24040:-1
so has part: feature:23270-24040:-1:exon

WP_225507951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23270-24040:-1:exon

LDL57_RS17885
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17885
pseudo: true
so part of: sequence
location: <24876..>24976
location: region:24876-24976:1
so has part: feature:24876-24976:1:exon
subclass of: SO_0000010

position:24876:1
position: 24876
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:24976:1
position: 24976
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24876-24976:1:exon

LDL57_RS17885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011082269.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
SIO_010081: LDL57_RS17885
subclass of: SO_0000673
so part of: LDL57_RS17885
location: <24876..>24976
location: region:24876-24976:1
so has part: feature:24876-24976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24876-24976:1:exon

LDL57_RS17075
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17075
old locus tag: LDL57_17075
pseudo: true
so part of: sequence
location: complement(25094..27421)
location: region:25094-27421:-1
so has part: feature:25094-27421:-1:exon
subclass of: SO_0000010

position:25094:-1
position: 25094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27421:-1
position: 27421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25094-27421:-1:exon

LDL57_RS17075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17075
old locus tag: LDL57_17075
inference: COORDINATES: protein motif:HMM:NF013676.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: LDL57_RS17075
subclass of: SO_0000673
so part of: LDL57_RS17075
location: complement(25094..27421)
location: region:25094-27421:-1
so has part: feature:25094-27421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25094-27421:-1:exon

LDL57_RS17080
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17080
old locus tag: LDL57_17080
pseudo: true
so part of: sequence
location: complement(27596..28799)
location: region:27596-28799:-1
so has part: feature:27596-28799:-1:exon
subclass of: SO_0000010

position:27596:-1
position: 27596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28799:-1
position: 28799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27596-28799:-1:exon

LDL57_RS17080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17080
old locus tag: LDL57_17080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS91 family transposase
SIO_010081: LDL57_RS17080
subclass of: SO_0000673
so part of: LDL57_RS17080
location: complement(27596..28799)
location: region:27596-28799:-1
so has part: feature:27596-28799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27596-28799:-1:exon

LDL57_RS17890
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17890
so part of: sequence
location: 31420..31545
location: region:31420-31545:1
so has part: feature:31420-31545:1:exon
subclass of: SO_0000010

position:31420:1
position: 31420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31545:1
position: 31545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31420-31545:1:exon

LDL57_RS17890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQTGWAQRFVSFLTIHMPEPGYRVPAYICGRPISQGADLHD
SIO_010081: LDL57_RS17890
subclass of: SO_0000673
so part of: LDL57_RS17890
location: 31420..31545
location: region:31420-31545:1
so has part: feature:31420-31545:1:exon

WP_255653933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31420-31545:1:exon

LDL57_RS17090
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17090
old locus tag: LDL57_17090
pseudo: true
so part of: sequence
location: complement(31593..32817)
location: region:31593-32817:-1
so has part: feature:31593-32817:-1:exon
subclass of: SO_0000010

position:31593:-1
position: 31593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32817:-1
position: 32817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31593-32817:-1:exon

LDL57_RS17090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17090
old locus tag: LDL57_17090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020308204.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LDL57_RS17090
subclass of: SO_0000673
so part of: LDL57_RS17090
location: complement(31593..32817)
location: region:31593-32817:-1
so has part: feature:31593-32817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31593-32817:-1:exon

LDL57_RS17095
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17095
old locus tag: LDL57_17095
so part of: sequence
location: 32876..33280
location: region:32876-33280:1
so has part: feature:32876-33280:1:exon
subclass of: SO_0000010

position:32876:1
position: 32876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33280:1
position: 33280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32876-33280:1:exon

LDL57_RS17095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS17095
old locus tag: LDL57_17095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MQKYKINRSRHAAFLLHVHLVFVTKYRKKVLSGLHYKAFHQYAGEVCRDFGADLKESNGESDHVHMLIEYPPTVQLSVLVNSLKAVTSRRLRNEFLDLRGAYGKPVLWSRSYFAGSCGGAPLEVVKQYIQNQRG
SIO_010081: LDL57_RS17095
subclass of: SO_0000673
so part of: LDL57_RS17095
location: 32876..33280
location: region:32876-33280:1
so has part: feature:32876-33280:1:exon

WP_225505529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32876-33280:1:exon

LDL57_RS17100
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17100
old locus tag: LDL57_17100
so part of: sequence
location: complement(33297..33527)
location: region:33297-33527:-1
so has part: feature:33297-33527:-1:exon
subclass of: SO_0000010

position:33297:-1
position: 33297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33527:-1
position: 33527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33297-33527:-1:exon

LDL57_RS17100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17100
old locus tag: LDL57_17100
inference: COORDINATES: protein motif:HMM:NF019984.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSARAAKTIRLTVRAWDLSHKTPLSLEIIARWLNPMLRGWVKYYGRFYRSSMNCIAILTSKGYSHRHKVGGEFGRA
SIO_010081: LDL57_RS17100
subclass of: SO_0000673
so part of: LDL57_RS17100
location: complement(33297..33527)
location: region:33297-33527:-1
so has part: feature:33297-33527:-1:exon

WP_225507914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33297-33527:-1:exon

LDL57_RS17105
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
gene: ltrA
locus tag: LDL57_RS17105
old locus tag: LDL57_17105
so part of: sequence
location: complement(33564..34424)
location: region:33564-34424:-1
so has part: feature:33564-34424:-1:exon
subclass of: SO_0000010

position:33564:-1
position: 33564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34424:-1
position: 34424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33564-34424:-1:exon

LDL57_RS17105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
gene: ltrA
locus tag: LDL57_RS17105
old locus tag: LDL57_17105
EC number: 2.7.7.49
inference: COORDINATES: protein motif:HMM:TIGR04416.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MSRQAVWSAYMKLKANKGGSGVDEQLIEEFDKNLAGNLYKIWNRMSSGSYMPPAVRRVEIPKATGGTRTLEIPTFSDRIAQMIVKGMLEPVLEPLFHDDFYGYRPHKSAHDALRMARHRCWRTDWVLDVDIKGFFDNIDHELLMIAVRRHTDCRWVQLYIERWLTASVRMPDGTVQIRDKGTPQGGVISPLLSNLFLHYAFDMWMFREFPVVRFERYADDIFIHCKSYTQAMMLRGRFRKRLAECKLEMSPKKTKVVYCKDRERTETYPEISFNFLGYTFRPRKSF
SIO_010081: LDL57_RS17105
subclass of: SO_0000673
so part of: LDL57_RS17105
location: complement(33564..34424)
location: region:33564-34424:-1
so has part: feature:33564-34424:-1:exon

WP_225507957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33564-34424:-1:exon

LDL57_RS17110
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17110
old locus tag: LDL57_17110
pseudo: true
so part of: sequence
location: 35078..36237
location: region:35078-36237:1
so has part: feature:35078-36237:1:exon
subclass of: SO_0000010

position:35078:1
position: 35078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36237:1
position: 36237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35078-36237:1:exon

LDL57_RS17110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17110
old locus tag: LDL57_17110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612135.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LDL57_RS17110
subclass of: SO_0000673
so part of: LDL57_RS17110
location: 35078..36237
location: region:35078-36237:1
so has part: feature:35078-36237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35078-36237:1:exon

LDL57_RS17115
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17115
old locus tag: LDL57_17115
so part of: sequence
location: complement(36419..37294)
location: region:36419-37294:-1
so has part: feature:36419-37294:-1:exon
subclass of: SO_0000010

position:36419:-1
position: 36419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37294:-1
position: 37294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36419-37294:-1:exon

LDL57_RS17115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17115
old locus tag: LDL57_17115
inference: COORDINATES: protein motif:HMM:NF013535.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enterotoxin A family protein
translation: MKLLFVLFITWLIQTQSYAIEVHSVVYRTDNRNIYEILLSGGMWPWHSETVDYDLTHHFEGESLEEQTSAFVSTSSSIASVVQHAASLARPNSEFPFDEDYLTYIYTVRPNNNFYDVQGSLRIARDNAPLNSQRRNRLERLLRDYTGMEEIVAVNGFSSDRIVEYAVLTGAMLNQYGIHSGSPLLSDVFWAERWRQEETVYNHQYNSDTSNLMPYNMIDIPTGIRSVVVNGTQPEVPLSFTCFGVNSNSHLSKRDIFLKKKPSCTKYEIINIHSLIYDKGLLYSLIENYGH
SIO_010081: LDL57_RS17115
subclass of: SO_0000673
so part of: LDL57_RS17115
location: complement(36419..37294)
location: region:36419-37294:-1
so has part: feature:36419-37294:-1:exon

WP_225507915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36419-37294:-1:exon

LDL57_RS17120
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17120
old locus tag: LDL57_17120
so part of: sequence
location: complement(37310..37639)
location: region:37310-37639:-1
so has part: feature:37310-37639:-1:exon
subclass of: SO_0000010

position:37310:-1
position: 37310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37639:-1
position: 37639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37310-37639:-1:exon

LDL57_RS17120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17120
old locus tag: LDL57_17120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKVIILLISILLSYQVSAGVGFSQACTKWQGNSLHEKQKIVSINGIYVADGFKQTVKLSNGYHYSIHKDNPSIYELSKVAFLIKVHVNVCVRSNIGPQDELIGIEIIN
SIO_010081: LDL57_RS17120
subclass of: SO_0000673
so part of: LDL57_RS17120
location: complement(37310..37639)
location: region:37310-37639:-1
so has part: feature:37310-37639:-1:exon

WP_180558302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37310-37639:-1:exon

LDL57_RS17895
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17895
so part of: sequence
location: complement(37771..37896)
location: region:37771-37896:-1
so has part: feature:37771-37896:-1:exon
subclass of: SO_0000010

position:37771:-1
position: 37771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37896:-1
position: 37896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37771-37896:-1:exon

LDL57_RS17895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDIQLGEEPTKLEKENDEINISYHHEEEKNQKIKEKEYGG
SIO_010081: LDL57_RS17895
subclass of: SO_0000673
so part of: LDL57_RS17895
location: complement(37771..37896)
location: region:37771-37896:-1
so has part: feature:37771-37896:-1:exon

WP_255653934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37771-37896:-1:exon

LDL57_RS17125
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17125
old locus tag: LDL57_17125
pseudo: true
so part of: sequence
location: complement(38223..41198)
location: region:38223-41198:-1
so has part: feature:38223-41198:-1:exon
subclass of: SO_0000010

position:38223:-1
position: 38223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41198:-1
position: 41198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38223-41198:-1:exon

LDL57_RS17125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17125
old locus tag: LDL57_17125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001556584.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: LDL57_RS17125
subclass of: SO_0000673
so part of: LDL57_RS17125
location: complement(38223..41198)
location: region:38223-41198:-1
so has part: feature:38223-41198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38223-41198:-1:exon

LDL57_RS17130
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17130
old locus tag: LDL57_17130
so part of: sequence
location: complement(41255..41878)
location: region:41255-41878:-1
so has part: feature:41255-41878:-1:exon
subclass of: SO_0000010

position:41255:-1
position: 41255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41878:-1
position: 41878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41255-41878:-1:exon

LDL57_RS17130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17130
old locus tag: LDL57_17130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016809496.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MYIHGYLRASTKEQDALRAKNRMKAFVEEKGFRMASWYTENVSGASLQRPELLRLLDDAASGDIILIEQVDRLSRLDEKGWEKLKRLIQEKDLIVVSLDLPTSHIALTSNVGDEFTFVMLKAINGMMLDMLAAIARKDYLDRRRRQQEGIAKAKAVGKFRGRQADHQLHEKIIELRVNNRQSIRDTARLCGVSERTVIRIVKQKTFS
SIO_010081: LDL57_RS17130
subclass of: SO_0000673
so part of: LDL57_RS17130
location: complement(41255..41878)
location: region:41255-41878:-1
so has part: feature:41255-41878:-1:exon

WP_006663401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41255-41878:-1:exon

LDL57_RS17135
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17135
old locus tag: LDL57_17135
so part of: sequence
location: complement(42550..43260)
location: region:42550-43260:-1
so has part: feature:42550-43260:-1:exon
subclass of: SO_0000010

position:42550:-1
position: 42550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43260:-1
position: 43260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42550-43260:-1:exon

LDL57_RS17135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17135
old locus tag: LDL57_17135
inference: COORDINATES: protein motif:HMM:NF020037.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MFNPESPDKKFGKSSNSLISFIEKSTNHWHIKDIESRYIYINKSLKQALKIPNKYDIEGVLDRELPVDICQDLWPQFIETDKKAVEENKTISSIEIHCYGEGNLNNPVPRFVEKTPLCDDNNKVIGTVCYGRMIEIPTLLYYMNRLNRKTIQFDAPNDTFTKRELEVIFWAQQRLSAKEIAQRLDISHKTVEGHFKLIYKKADVHSIFQLIEYCKHTGLDRYIPIDFIRKGVQLIN
SIO_010081: LDL57_RS17135
subclass of: SO_0000673
so part of: LDL57_RS17135
location: complement(42550..43260)
location: region:42550-43260:-1
so has part: feature:42550-43260:-1:exon

WP_225507918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42550-43260:-1:exon

LDL57_RS17140
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17140
old locus tag: LDL57_17140
so part of: sequence
location: 43398..44678
location: region:43398-44678:1
so has part: feature:43398-44678:1:exon
subclass of: SO_0000010

position:43398:1
position: 43398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44678:1
position: 44678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43398-44678:1:exon

LDL57_RS17140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17140
old locus tag: LDL57_17140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytosine permease
translation: MIKISDDVYAFDTTPLEAKANFLDVTLVRMGITTALSQFMIGMTLGHSMTFWDAMIASCLGSFILEFISLGLGYAGMKEGLSTSLLSRWCGFGSIGSVLVSFTLSMSLIGWFGVQNSILANGILNAFNHELSFELVAAFLGVFFTFLVASGFKALTLTAKIAVPLFFLVILYIFLSLISNDSIVIQHTTSLHVTKLSISEAATVVAGGFITASLTTPDISRYCKNKSHLFWMITLCIIVGEFVVNGIAILITQALNSADIVDILTVNAGVIGLISLILSVIKVNDVNLYSSSLGFSNTLQVLTGKKFDYYKITIFLGLAGTVLSVSGILNHFVDFLSMLGVIFPPIAGVMLVDYYILKTSRKILDETREKGILPDDSQTQIIGWSAIIACIVGTLVGAFFSFGIPSLNSISVAGVAYWILMKMKKN
SIO_010081: LDL57_RS17140
subclass of: SO_0000673
so part of: LDL57_RS17140
location: 43398..44678
location: region:43398-44678:1
so has part: feature:43398-44678:1:exon

WP_180558323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43398-44678:1:exon

LDL57_RS17145
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17145
old locus tag: LDL57_17145
so part of: sequence
location: complement(44721..44984)
location: region:44721-44984:-1
so has part: feature:44721-44984:-1:exon
subclass of: SO_0000010

position:44721:-1
position: 44721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44984:-1
position: 44984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44721-44984:-1:exon

LDL57_RS17145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17145
old locus tag: LDL57_17145
inference: COORDINATES: protein motif:HMM:NF012422.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSFKNSNNEQYEVTNDLELMPKLSKRELQILVMTCSGFTRTDIALALNVSLDTINSHFKNALRKYDLNTYNQLQAMFLFNFLKKLNK
SIO_010081: LDL57_RS17145
subclass of: SO_0000673
so part of: LDL57_RS17145
location: complement(44721..44984)
location: region:44721-44984:-1
so has part: feature:44721-44984:-1:exon

WP_180558322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44721-44984:-1:exon

LDL57_RS17900
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17900
so part of: sequence
location: complement(44981..45115)
location: region:44981-45115:-1
so has part: feature:44981-45115:-1:exon
subclass of: SO_0000010

position:44981:-1
position: 44981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45115:-1
position: 45115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44981-45115:-1:exon

LDL57_RS17900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNSTFRVLVCEAPKHTIVLFSRLSRNLTPRQRARILNSVGGGV
SIO_010081: LDL57_RS17900
subclass of: SO_0000673
so part of: LDL57_RS17900
location: complement(44981..45115)
location: region:44981-45115:-1
so has part: feature:44981-45115:-1:exon

WP_255498963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44981-45115:-1:exon

LDL57_RS17150
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17150
old locus tag: LDL57_17150
so part of: sequence
location: complement(45228..45482)
location: region:45228-45482:-1
so has part: feature:45228-45482:-1:exon
subclass of: SO_0000010

position:45228:-1
position: 45228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45482:-1
position: 45482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45228-45482:-1:exon

LDL57_RS17150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17150
old locus tag: LDL57_17150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRSDRITKGVTRVVEKRNITTGKQMNLRMTNLDEDALSIMIDKIQEIVPQKNISKSRILRAVGYLNDDINLVKKLAKSVINNT
SIO_010081: LDL57_RS17150
subclass of: SO_0000673
so part of: LDL57_RS17150
location: complement(45228..45482)
location: region:45228-45482:-1
so has part: feature:45228-45482:-1:exon

WP_180558321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45228-45482:-1:exon

LDL57_RS17155
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17155
old locus tag: LDL57_17155
so part of: sequence
location: complement(45483..46265)
location: region:45483-46265:-1
so has part: feature:45483-46265:-1:exon
subclass of: SO_0000010

position:45483:-1
position: 45483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46265:-1
position: 46265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45483-46265:-1:exon

LDL57_RS17155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17155
old locus tag: LDL57_17155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006118548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKKPFIISFANSKGGVGKTTSCISVGCCLAQQGYQTLLIDLDHQGNLSDDLGRGDEDYTVTDLFENPKFDINKIIYSALDSNDEIKNLSIIPADITLAVEARSAERFRHRLTILEDALKRLDTKFDFILFDLRPAIDLSIENALLITDFIVIPVDMDRRAIKGINDLLQVAKEVKRQENIVYTLVKTKVNKSHTRMQRAINEYVKKSGYYVTKTEIRVSELYKQATENHRPSPLYAFNERPHEDYLLLTHELIKRVEEIS
SIO_010081: LDL57_RS17155
subclass of: SO_0000673
so part of: LDL57_RS17155
location: complement(45483..46265)
location: region:45483-46265:-1
so has part: feature:45483-46265:-1:exon

WP_180558320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45483-46265:-1:exon

LDL57_RS17160
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17160
old locus tag: LDL57_17160
so part of: sequence
location: complement(46369..47304)
location: region:46369-47304:-1
so has part: feature:46369-47304:-1:exon
subclass of: SO_0000010

position:46369:-1
position: 46369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47304:-1
position: 47304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46369-47304:-1:exon

LDL57_RS17160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17160
old locus tag: LDL57_17160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTDLTTKTRKNNLKTLKPRKHEIDFFIADEVELSGFRDEIASMEHPFFALKGGDRDTRRYKSGSKTVVIAPNAEYGMATVFDKDVWIYAISKLQEAINNNQPISRTIAFTPYDFFVTTNRTISGRTYKELEKSLERLAGTRITTNIVYSSDKQESVGFGLIDSWRILDEKKGNLDIGMVEVMIPDWLYQALSKNKMLKISPDYFRIRKAIDRRLYEIARKHCGNQHEFIISLEKLHLKTGSSSNKREFKRLVKNLCTTNDLPDYEVFFDPVTDKVTFKNRNQNTPQADASQKREKGKREVHKIKKSLLKNN
SIO_010081: LDL57_RS17160
subclass of: SO_0000673
so part of: LDL57_RS17160
location: complement(46369..47304)
location: region:46369-47304:-1
so has part: feature:46369-47304:-1:exon

WP_180558319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46369-47304:-1:exon

LDL57_RS17165
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17165
old locus tag: LDL57_17165
so part of: sequence
location: 48038..48310
location: region:48038-48310:1
so has part: feature:48038-48310:1:exon
subclass of: SO_0000010

position:48038:1
position: 48038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48310:1
position: 48310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48038-48310:1:exon

LDL57_RS17165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17165
old locus tag: LDL57_17165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010865085.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKTELINKVSEKSGLAKKDAEKVVNAFAETITESLKSGNSVQLVGFGSFQVKQRAERKGRNPQTGKAIKIAASNIPSFKAGQKLKDAVK
SIO_010081: LDL57_RS17165
subclass of: SO_0000673
so part of: LDL57_RS17165
location: 48038..48310
location: region:48038-48310:1
so has part: feature:48038-48310:1:exon

WP_180558318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48038-48310:1:exon

LDL57_RS17170
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17170
old locus tag: LDL57_17170
so part of: sequence
location: 48848..49795
location: region:48848-49795:1
so has part: feature:48848-49795:1:exon
subclass of: SO_0000010

position:48848:1
position: 48848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49795:1
position: 49795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48848-49795:1:exon

LDL57_RS17170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17170
old locus tag: LDL57_17170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015981317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MKKILSHHDHLFKKFLGDITIARDFLEIHLPENIRKLCDFKTLAMESGSFIEPTLRSHCSDMLYSVQTTTGKGYIYTLIEHQSRPEKLMAFRLLRYSVAAMHQHLEQGNDTLPVVIPLLFYQGKTSPYPYSTEWMNCFADPELAKSVYTQAFPLVDITAIPDEEIVKHKRVALMELVMKHIRARDMLEFSQEIASLLNQYVIQPELFKGLMYYIVERGNTSDATQFLHQIAEKADDYREVVMTIAEQLRREGEHKGIQKGMQEGIQKGKLEGLQEGEKQASLKIARQLLEKGVERDIVKLSTGLTDAELRNLFKD
SIO_010081: LDL57_RS17170
subclass of: SO_0000673
so part of: LDL57_RS17170
location: 48848..49795
location: region:48848-49795:1
so has part: feature:48848-49795:1:exon

WP_225507920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48848-49795:1:exon

LDL57_RS17175
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17175
old locus tag: LDL57_17175
so part of: sequence
location: 49797..50363
location: region:49797-50363:1
so has part: feature:49797-50363:1:exon
subclass of: SO_0000010

position:49797:1
position: 49797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50363:1
position: 50363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49797-50363:1:exon

LDL57_RS17175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17175
old locus tag: LDL57_17175
inference: COORDINATES: protein motif:HMM:NF016255.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ProQ/FINO family protein
translation: MTERQKLTLNRPKWASEETTSKSSPMYRKKVWVNPTPQKQVKKPKLQKPVKPITQKRVEKPQPVVKVKIPKPPQQPKKRLPLAEAISQISAFWPDLFPEQQLKPMKIGIRQAMWQEVNEKGLPLTKKRLRACLGSIGHHADYRALIQLGASRYDKDGRMAGEVTQADVEDNLQRMVKLNKLLQQPTDG
SIO_010081: LDL57_RS17175
subclass of: SO_0000673
so part of: LDL57_RS17175
location: 49797..50363
location: region:49797-50363:1
so has part: feature:49797-50363:1:exon

WP_225507922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49797-50363:1:exon