Arsenophonus apicola strain ArsBeeUS plasmid pArsBee3, complete sequence.
type: Entry
definition: Arsenophonus apicola strain ArsBeeUS plasmid pArsBee3, complete sequence.
sequence version: NZ_CP084225.1
sequence date: 2022-09-04
sequence: sequence
division: CON
label: NZ_CP084225.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN21873137
keyword: RefSeq
source: Arsenophonus apicola
organism: Arsenophonus apicola
taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Morganellaceae; Arsenophonus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP084225.1.\nBacteria and source DNA available from Pol Nadal Jimenez, Institute\nof Infection, Veterinary and Ecological Sciences, University of\nLiverpool, Ic2 Liverpool Science Park, 146 Brownlow Hill,\nLiverpool, L3 5RF, UK.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Flye v. 2.8; Pilon v. 1.23\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 49.6x\nSequencing Technology :: Oxford Nanopore MinION; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/04/2022 11:51:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,553\nCDSs (total) :: 3,453\nGenes (coding) :: 3,222\nCDSs (with protein) :: 3,222\nGenes (RNA) :: 100\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 8\nPseudo Genes (total) :: 231\nCDSs (without protein) :: 231\nPseudo Genes (ambiguous residues) :: 0 of 231\nPseudo Genes (frameshifted) :: 136 of 231\nPseudo Genes (incomplete) :: 66 of 231\nPseudo Genes (internal stop) :: 64 of 231\nPseudo Genes (multiple problems) :: 33 of 231\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 52553
topology: circular
so has quality: SO_0000988
location: 1..52553
location: region:1-52553:1
RO_0002162: 2879119

NZ_CP084225
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN21873137
type: BioSample
SIO_000068: biosample

1
title: Culture and genomic analysis of Arsenophonus apicola sp. nov. isolated from the honeybee Apis mellifera
author: Nadal-Jimenez, P.
author: Siozios, S.
author: Frost, C.L.
author: Court, R.
author: Chrostek, E.
author: Drew, G.C.
author: Evans, J.D.
author: Hawthorne, D.J.
author: Burritt, J.B.
author: Hurst, G.D.D.
journal: Unpublished

2
title: Direct Submission
author: Siozios, S.
author: Frost, C.L.
author: Nadal-Jimenez, P.
author: Burritt, J.B.
author: Hurst, G.D.D.
journal: Submitted (27-SEP-2021) Evolution, Ecology and Behaviour, University of Liverpool, Crown Street, Biosciences building, Liverpool L69 7ZB, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52553:1
position: 52553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-52553:1:source
so part of: sequence
organism: Arsenophonus apicola
mol type: genomic DNA
strain: ArsBeeUS
isolation source: hemolymph
host: Apis mellifera
type material: type strain of Arsenophonus apicola
plasmid: pArsBee3
country: USA: Dunn County Wisconsin
lat lon: 44.952830 N 91.887010 W
collection date: 2016

2879119
type: Taxonomy
SIO_000068: taxonomy

LDL57_RS16540
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16540
old locus tag: LDL57_16540
so part of: sequence
location: complement(45..329)
location: region:45-329:-1
so has part: feature:45-329:-1:exon
subclass of: SO_0000010

position:45:-1
position: 45
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329:-1
position: 329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45-329:-1:exon

LDL57_RS16540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16540
old locus tag: LDL57_16540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMKLIELAIPANRKFVLYFGIKMSINEDHHFIATDEWGDVMSFKKRPIKKDFRFGWENDGTDDSELPELVAKVDLNGIDWNNTLKTVEECLFT
SIO_010081: LDL57_RS16540
subclass of: SO_0000673
so part of: LDL57_RS16540
location: complement(45..329)
location: region:45-329:-1
so has part: feature:45-329:-1:exon

WP_225505450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45-329:-1:exon

LDL57_RS16545
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16545
old locus tag: LDL57_16545
so part of: sequence
location: complement(372..650)
location: region:372-650:-1
so has part: feature:372-650:-1:exon
subclass of: SO_0000010

position:372:-1
position: 372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650:-1
position: 650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372-650:-1:exon

LDL57_RS16545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16545
old locus tag: LDL57_16545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLDNPRIVTAKHPNMGNLVGVTNGSRDLSDSIYLSSIDIRDDDDREVRTFKTIIQCLTNENDRLKKENRRLMKIYREIDKKRNNFSFINLT
SIO_010081: LDL57_RS16545
subclass of: SO_0000673
so part of: LDL57_RS16545
location: complement(372..650)
location: region:372-650:-1
so has part: feature:372-650:-1:exon

WP_225505449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372-650:-1:exon

LDL57_RS16550
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16550
old locus tag: LDL57_16550
so part of: sequence
location: complement(666..1112)
location: region:666-1112:-1
so has part: feature:666-1112:-1:exon
subclass of: SO_0000010

position:666:-1
position: 666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112:-1
position: 1112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666-1112:-1:exon

LDL57_RS16550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16550
old locus tag: LDL57_16550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012105520.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pentapeptide repeat-containing protein
translation: MNNDELRKILDEHKFWVDSMGKNGRKANLSGANLIRADLQGADLWGANLRGADLYEANLRGANLCGADLPHDTFVIMGEPYPIMITNGENLRAGCQHHSVEKWRQFSKEDIVNMDGRKALEFYPRLLDMLDFYLGKGERPDWLNQTAQ
SIO_010081: LDL57_RS16550
subclass of: SO_0000673
so part of: LDL57_RS16550
location: complement(666..1112)
location: region:666-1112:-1
so has part: feature:666-1112:-1:exon

WP_225505448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666-1112:-1:exon

LDL57_RS16555
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16555
old locus tag: LDL57_16555
so part of: sequence
location: complement(1333..1992)
location: region:1333-1992:-1
so has part: feature:1333-1992:-1:exon
subclass of: SO_0000010

position:1333:-1
position: 1333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992:-1
position: 1992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333-1992:-1:exon

LDL57_RS16555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16555
old locus tag: LDL57_16555
inference: COORDINATES: protein motif:HMM:NF019151.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease family protein
translation: MLIACYNAFYNNDRKGFKKILKYITIITFRYNIICGMLPHEQERLYSSISQGISLESYGVSKVLKNLKIKLYPSDDTFKNDFSNKIIKTGNNRNTKLIKYILTEIEKSITNSTSYYDLNTVTVEHILPKSPSDEWNIGNDYHFDNLVHRIGNMCLLASNDNKKIGNKSFEYKKPSYINSKFDITKYIGSNYEEWNENSIIERQKFLAKKALNIWSLNDE
SIO_010081: LDL57_RS16555
subclass of: SO_0000673
so part of: LDL57_RS16555
location: complement(1333..1992)
location: region:1333-1992:-1
so has part: feature:1333-1992:-1:exon

WP_225507891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1333-1992:-1:exon

LDL57_RS16560
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16560
old locus tag: LDL57_16560
so part of: sequence
location: complement(2480..3067)
location: region:2480-3067:-1
so has part: feature:2480-3067:-1:exon
subclass of: SO_0000010

position:2480:-1
position: 2480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067:-1
position: 3067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2480-3067:-1:exon

LDL57_RS16560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16560
old locus tag: LDL57_16560
inference: COORDINATES: protein motif:HMM:NF015210.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF262 domain-containing protein
translation: MSKNMPTMNFDTKNQSFNELLSPSYNYIVPPFQRDYSWEESDWNELWQDIVSLLNDEPYSFHYMGYLVLQSEDTKNFKIVDGQQRITTISIIILAACSIFDDLINNNIDTEQNKTRKEKFISSYIGYTDPVLICEHTKLQLNKNNDNYYQTYLATLAKLPQRNLNNSEHKLRKSFFFFKKKWKIICLKFMIKEQD
SIO_010081: LDL57_RS16560
subclass of: SO_0000673
so part of: LDL57_RS16560
location: complement(2480..3067)
location: region:2480-3067:-1
so has part: feature:2480-3067:-1:exon

WP_225507893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2480-3067:-1:exon

LDL57_RS16565
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16565
old locus tag: LDL57_16565
so part of: sequence
location: complement(3176..3463)
location: region:3176-3463:-1
so has part: feature:3176-3463:-1:exon
subclass of: SO_0000010

position:3176:-1
position: 3176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3463:-1
position: 3463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3176-3463:-1:exon

LDL57_RS16565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16565
old locus tag: LDL57_16565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MINLNHILESPLMDENKKIIQVQIVADVSAKCNYIVDMTEEDYRKFEKIIDSQMTSREMNNAILDIACKYGIYDNIDFNEPEDTEFHRIGASTIY
SIO_010081: LDL57_RS16565
subclass of: SO_0000673
so part of: LDL57_RS16565
location: complement(3176..3463)
location: region:3176-3463:-1
so has part: feature:3176-3463:-1:exon

WP_225505446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3176-3463:-1:exon

LDL57_RS16570
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16570
old locus tag: LDL57_16570
so part of: sequence
location: complement(3705..3947)
location: region:3705-3947:-1
so has part: feature:3705-3947:-1:exon
subclass of: SO_0000010

position:3705:-1
position: 3705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3947:-1
position: 3947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3705-3947:-1:exon

LDL57_RS16570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16570
old locus tag: LDL57_16570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLIKKLYAADGYRVFIGEHETESLHESVIISIKGAKFTRFDKAQIDTQYRIVTYLDKDGLRVGAAICEVIEGNILTLTE
SIO_010081: LDL57_RS16570
subclass of: SO_0000673
so part of: LDL57_RS16570
location: complement(3705..3947)
location: region:3705-3947:-1
so has part: feature:3705-3947:-1:exon

WP_225507895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705-3947:-1:exon

LDL57_RS16575
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16575
old locus tag: LDL57_16575
so part of: sequence
location: complement(4049..4390)
location: region:4049-4390:-1
so has part: feature:4049-4390:-1:exon
subclass of: SO_0000010

position:4049:-1
position: 4049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4390:-1
position: 4390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049-4390:-1:exon

LDL57_RS16575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16575
old locus tag: LDL57_16575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006657616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCNFHGYDNARRRRNERRRARQAAYEYNKALNMALKAALNRSKPSQQQTPTNTKRPILSLKRKVINRVEKAISIRPTKVYDAFNNCCLPIAALYTSRRFHSKPKSNFGVTANC
SIO_010081: LDL57_RS16575
subclass of: SO_0000673
so part of: LDL57_RS16575
location: complement(4049..4390)
location: region:4049-4390:-1
so has part: feature:4049-4390:-1:exon

WP_225505440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4049-4390:-1:exon

LDL57_RS16580
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16580
old locus tag: LDL57_16580
so part of: sequence
location: complement(5007..5231)
location: region:5007-5231:-1
so has part: feature:5007-5231:-1:exon
subclass of: SO_0000010

position:5007:-1
position: 5007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5231:-1
position: 5231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5007-5231:-1:exon

LDL57_RS16580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16580
old locus tag: LDL57_16580
inference: COORDINATES: protein motif:HMM:NF012920.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S24 family peptidase
translation: MCLLFRRYSLKKMGVHPQSARLVRISGNSMEPALNDGDVVGINTDKTSIEDGKTYAISHDDVLRVKTLISAPGK
SIO_010081: LDL57_RS16580
subclass of: SO_0000673
so part of: LDL57_RS16580
location: complement(5007..5231)
location: region:5007-5231:-1
so has part: feature:5007-5231:-1:exon

WP_255653932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5007-5231:-1:exon

LDL57_RS16585
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16585
old locus tag: LDL57_16585
so part of: sequence
location: complement(5285..5608)
location: region:5285-5608:-1
so has part: feature:5285-5608:-1:exon
subclass of: SO_0000010

position:5285:-1
position: 5285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5608:-1
position: 5608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5285-5608:-1:exon

LDL57_RS16585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16585
old locus tag: LDL57_16585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLNCFKAIEFYYAKSKRYSRSFISSPLVWLNLAFGNYTSSAVKLYKVVEIAKVLGVRPEWLASGIEPMTDNNNKLKHSELKNTRLKLNIFEEMKNQDLEEFVEIPL
SIO_010081: LDL57_RS16585
subclass of: SO_0000673
so part of: LDL57_RS16585
location: complement(5285..5608)
location: region:5285-5608:-1
so has part: feature:5285-5608:-1:exon

WP_225507897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5285-5608:-1:exon

LDL57_RS16590
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16590
old locus tag: LDL57_16590
so part of: sequence
location: complement(6157..6468)
location: region:6157-6468:-1
so has part: feature:6157-6468:-1:exon
subclass of: SO_0000010

position:6157:-1
position: 6157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6468:-1
position: 6468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6157-6468:-1:exon

LDL57_RS16590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16590
old locus tag: LDL57_16590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATIIFKPKKDNAKSRRLAKQMAFWDRKRAEYEAKPKPRSTEQILDSIFSKQDDTVNTIASLTLNLKDKKPQPSFDNCCLPNTYLYSARRYSKNRKSNSIQTK
SIO_010081: LDL57_RS16590
subclass of: SO_0000673
so part of: LDL57_RS16590
location: complement(6157..6468)
location: region:6157-6468:-1
so has part: feature:6157-6468:-1:exon

WP_225507898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6157-6468:-1:exon

LDL57_RS16605
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16605
old locus tag: LDL57_16605
so part of: sequence
location: complement(8416..8856)
location: region:8416-8856:-1
so has part: feature:8416-8856:-1:exon
subclass of: SO_0000010

position:8416:-1
position: 8416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8856:-1
position: 8856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8416-8856:-1:exon

LDL57_RS16605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16605
old locus tag: LDL57_16605
inference: COORDINATES: protein motif:HMM:NF013540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MMQKIEINLHAKKNELCITQEDIADQLGIGQAAVSHYLNGVNPLNAKTVALFAKLLKVKPNEISPSIALELEEIAKLMLPTDHSYMIPDNSYTKLTKTEEKLLDMFNALTEDEQRNYLEEIAETQANLERIYKEMKEKEKKSKRAS
SIO_010081: LDL57_RS16605
subclass of: SO_0000673
so part of: LDL57_RS16605
location: complement(8416..8856)
location: region:8416-8856:-1
so has part: feature:8416-8856:-1:exon

WP_225507900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8416-8856:-1:exon

LDL57_RS16610
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16610
old locus tag: LDL57_16610
so part of: sequence
location: 9302..9640
location: region:9302-9640:1
so has part: feature:9302-9640:1:exon
subclass of: SO_0000010

position:9302:1
position: 9302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9640:1
position: 9640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9302-9640:1:exon

LDL57_RS16610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16610
old locus tag: LDL57_16610
inference: COORDINATES: protein motif:HMM:NF017113.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CII family transcriptional regulator
translation: METTITRKSNAKNIEAKIRNGIQAHSAIRIAHAIGINPSQITRWQSEDGIIPKMARLLDCIGYDSPKQDLVITNISGEEIRKLIDMLEHLRLPKKEAPELKNNGACKHHIQL
SIO_010081: LDL57_RS16610
subclass of: SO_0000673
so part of: LDL57_RS16610
location: 9302..9640
location: region:9302-9640:1
so has part: feature:9302-9640:1:exon

WP_225505775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9302-9640:1:exon

LDL57_RS16615
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16615
old locus tag: LDL57_16615
so part of: sequence
location: 9713..9886
location: region:9713-9886:1
so has part: feature:9713-9886:1:exon
subclass of: SO_0000010

position:9713:1
position: 9713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9886:1
position: 9886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9713-9886:1:exon

LDL57_RS16615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16615
old locus tag: LDL57_16615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012987732.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANKRRFYQSNIHKNIIRERVNRSFTELAAKKLKAALENAKLRLKHREESIRGNQYE
SIO_010081: LDL57_RS16615
subclass of: SO_0000673
so part of: LDL57_RS16615
location: 9713..9886
location: region:9713-9886:1
so has part: feature:9713-9886:1:exon

WP_225505431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9713-9886:1:exon

LDL57_RS16620
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16620
old locus tag: LDL57_16620
so part of: sequence
location: 9879..10625
location: region:9879-10625:1
so has part: feature:9879-10625:1:exon
subclass of: SO_0000010

position:9879:1
position: 9879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10625:1
position: 10625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9879-10625:1:exon

LDL57_RS16620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16620
old locus tag: LDL57_16620
inference: COORDINATES: protein motif:HMM:NF025107.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSRIATNWVWKINLKASQKLLLLALADRADEHHCCYPSIQRLSNDTGLDRKTICRQINQMIAEGLIIDTGERKGATKQVKVLRLNITEEEYQKRDDKQYQNGNSTEIGNDPKNGTLNSTKNGTLKDPKNGTQNLSVEPNIESKDLNTQKTVQKKSIEKISRYAFEGEVIRLNQKDFEQWASIFSDIDLLQELKRFDVEFSKEKPKNWFSALSAKLNYQNETARKRKQQRQPIPNQSTMTIAKNGLVFF
SIO_010081: LDL57_RS16620
subclass of: SO_0000673
so part of: LDL57_RS16620
location: 9879..10625
location: region:9879-10625:1
so has part: feature:9879-10625:1:exon

WP_225505771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9879-10625:1:exon

LDL57_RS16625
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16625
old locus tag: LDL57_16625
so part of: sequence
location: 10743..12629
location: region:10743-12629:1
so has part: feature:10743-12629:1:exon
subclass of: SO_0000010

position:10743:1
position: 10743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12629:1
position: 12629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10743-12629:1:exon

LDL57_RS16625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16625
old locus tag: LDL57_16625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010848819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional DNA primase/helicase
translation: MSITELSERLWLDVVRVAKYLLPEGKKEGHEWVAGSVHGEQGKSLKVNLSGKKVWSDFAEGTGGDLLDLWVQVRGCSLHQAMAEAKQFLGIADESGTFEAKRKKQFKRPQPASLKKTVRKPQDCYEYLQSRGIGRKTAKEFQVSDGIVWSPEDNRELPAIAFPYKRDGELIQVKRISTARPDGKKVISVEADCEPCLFGWQALPKATRAVILCEGEIDCMSYHQYGLSALSVPFGGGCGAKQQWIEYEFHNLDRFTEIWLSMDNDEVGQQAALEIARRLGEYRCRLVKLPHKDINECLQAGMTQQEIVHCLETAAYFDPEELCTARDFYQSTLDAFYGKEEYLFKTPWESLNRHFSYRESELTLLNGVNGHGKSEILGHVLCEAMRQGMRACVASFELKPATFLKRLTRQATCAKLPSQLEIESAFKFYEDRLWLFGLTGTAKSSRLLEIFRYANRRYGINLFIIDSLMKCGLADDDYNGQKAFMDALCDFKNKTSCHVILVTHSRKSESEEKPTGKMDVKGSGSITDLADNLFIIWRNKRRERALQKLEASQLLTEKEQEYLKEPASILCLEKQRNGEGWEGKISLYLDKQAHQFLAEENTSPYNYIANMPNSDYDQVWMNNNVSRD
SIO_010081: LDL57_RS16625
subclass of: SO_0000673
so part of: LDL57_RS16625
location: 10743..12629
location: region:10743-12629:1
so has part: feature:10743-12629:1:exon

WP_225507910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10743-12629:1:exon

LDL57_RS16630
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16630
old locus tag: LDL57_16630
so part of: sequence
location: 12669..12914
location: region:12669-12914:1
so has part: feature:12669-12914:1:exon
subclass of: SO_0000010

position:12669:1
position: 12669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12914:1
position: 12914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12669-12914:1:exon

LDL57_RS16630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16630
old locus tag: LDL57_16630
inference: COORDINATES: protein motif:HMM:NF018403.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1187 family protein
translation: MKYQIEATLVKDGGEPVHWQRFSDKALSEKDCLKMLSQPSMFKMQFSEIGYYWTAINVKAGKQAQIKLINFICKEINDGVD
SIO_010081: LDL57_RS16630
subclass of: SO_0000673
so part of: LDL57_RS16630
location: 12669..12914
location: region:12669-12914:1
so has part: feature:12669-12914:1:exon

WP_225505769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12669-12914:1:exon

LDL57_RS16635
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16635
old locus tag: LDL57_16635
so part of: sequence
location: 12898..13110
location: region:12898-13110:1
so has part: feature:12898-13110:1:exon
subclass of: SO_0000010

position:12898:1
position: 12898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13110:1
position: 13110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12898-13110:1:exon

LDL57_RS16635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16635
old locus tag: LDL57_16635
inference: COORDINATES: protein motif:HMM:NF016343.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF551 domain-containing protein
translation: MMEWIKCEERLPLVDELVLICKRCNDDFEIEVGWRENENSTFIYHCNKDEKLTFEPDYWMPLPEPPKEDW
SIO_010081: LDL57_RS16635
subclass of: SO_0000673
so part of: LDL57_RS16635
location: 12898..13110
location: region:12898-13110:1
so has part: feature:12898-13110:1:exon

WP_225505427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12898-13110:1:exon

LDL57_RS16640
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16640
old locus tag: LDL57_16640
so part of: sequence
location: complement(13133..13417)
location: region:13133-13417:-1
so has part: feature:13133-13417:-1:exon
subclass of: SO_0000010

position:13133:-1
position: 13133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13417:-1
position: 13417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13133-13417:-1:exon

LDL57_RS16640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16640
old locus tag: LDL57_16640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQEQLLVFARRIVSLIRVRVICLPDIPPVLFHFKKTWLNKKERIYTIVIANDVTATIDKSLKEAINHVLLSILIVNIIIDITTPKKQKIFMLIL
SIO_010081: LDL57_RS16640
subclass of: SO_0000673
so part of: LDL57_RS16640
location: complement(13133..13417)
location: region:13133-13417:-1
so has part: feature:13133-13417:-1:exon

WP_225505426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13133-13417:-1:exon

LDL57_RS16645
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16645
old locus tag: LDL57_16645
so part of: sequence
location: 13345..13788
location: region:13345-13788:1
so has part: feature:13345-13788:1:exon
subclass of: SO_0000010

position:13345:1
position: 13345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13788:1
position: 13788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13345-13788:1:exon

LDL57_RS16645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16645
old locus tag: LDL57_16645
inference: COORDINATES: protein motif:HMM:NF007281.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination protein NinB
translation: MEDKLLLHESTKQSVWQTLKAVLATNQPHQLIIKPFKQTRSLSQNALFHLWTSEISKYLCANDANYTPEQVKEMLKHTFLGYEVVERIDVTTQQPERVRTLRRTSKLDTGEMHIFMQKVECWAIGIRCFVTVPESSEYMKLKQGQEQ
SIO_010081: LDL57_RS16645
subclass of: SO_0000673
so part of: LDL57_RS16645
location: 13345..13788
location: region:13345-13788:1
so has part: feature:13345-13788:1:exon

WP_225507508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13345-13788:1:exon

LDL57_RS16650
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16650
old locus tag: LDL57_16650
so part of: sequence
location: 14075..14227
location: region:14075-14227:1
so has part: feature:14075-14227:1:exon
subclass of: SO_0000010

position:14075:1
position: 14075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14227:1
position: 14227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14075-14227:1:exon

LDL57_RS16650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16650
old locus tag: LDL57_16650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRPRQCTRRERVFIDKIQLHLNGGLDGDRKDPPVGFTGKANPVQFTTIRD
SIO_010081: LDL57_RS16650
subclass of: SO_0000673
so part of: LDL57_RS16650
location: 14075..14227
location: region:14075-14227:1
so has part: feature:14075-14227:1:exon

WP_225507902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14075-14227:1:exon

LDL57_RS16655
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16655
old locus tag: LDL57_16655
pseudo: true
so part of: sequence
location: 14270..>14588
location: region:14270-14588:1
so has part: feature:14270-14588:1:exon
subclass of: SO_0000010

position:14270:1
position: 14270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14588:1
position: 14588
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14270-14588:1:exon

LDL57_RS16655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16655
old locus tag: LDL57_16655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410602.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
SIO_010081: LDL57_RS16655
subclass of: SO_0000673
so part of: LDL57_RS16655
location: 14270..>14588
location: region:14270-14588:1
so has part: feature:14270-14588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14270-14588:1:exon

LDL57_RS16660
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16660
old locus tag: LDL57_16660
so part of: sequence
location: 14857..15330
location: region:14857-15330:1
so has part: feature:14857-15330:1:exon
subclass of: SO_0000010

position:14857:1
position: 14857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15330:1
position: 15330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14857-15330:1:exon

LDL57_RS16660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16660
old locus tag: LDL57_16660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001749500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALKRDKYDAVFSELVRERTNWICDYCGRHFQHERAKLHCSHFKSRRHKATRYHPLNSFSHCQGCHRKLGEDPYEFTAHAEITYGEMTIAKIAMLANTPVRFKVGEMDEIYRQMKSELKRMKTMRLDGFIGRIEFFLPDWYQAGITFRMGEEKAHTL
SIO_010081: LDL57_RS16660
subclass of: SO_0000673
so part of: LDL57_RS16660
location: 14857..15330
location: region:14857-15330:1
so has part: feature:14857-15330:1:exon

WP_225505425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14857-15330:1:exon

LDL57_RS16665
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16665
old locus tag: LDL57_16665
so part of: sequence
location: 15397..15888
location: region:15397-15888:1
so has part: feature:15397-15888:1:exon
subclass of: SO_0000010

position:15397:1
position: 15397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15888:1
position: 15888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15397-15888:1:exon

LDL57_RS16665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16665
old locus tag: LDL57_16665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015994256.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0060567 - negative regulation of termination of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antiterminator Q family protein
translation: MRAVKSLELTKAQHDWVNGWLELWGAWVSSGELDKRQFNIIWRFMQKAKGEVIPSRPMCNDDEGLLISQVVDAVMRIDEKAYQILLSYYVYGKSKLSIATYYHNIAKPRRMKTRAGGRWKKPSRITCRREIDDILNASVYLIHNRLITVMKNPNTVDKMINYT
SIO_010081: LDL57_RS16665
subclass of: SO_0000673
so part of: LDL57_RS16665
location: 15397..15888
location: region:15397-15888:1
so has part: feature:15397-15888:1:exon

WP_225507506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15397-15888:1:exon

LDL57_RS16670
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16670
old locus tag: LDL57_16670
so part of: sequence
location: complement(16111..16374)
location: region:16111-16374:-1
so has part: feature:16111-16374:-1:exon
subclass of: SO_0000010

position:16111:-1
position: 16111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16374:-1
position: 16374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16111-16374:-1:exon

LDL57_RS16670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16670
old locus tag: LDL57_16670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247854.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKNICQKPHRYNQLFTSLSNNQGQNSRHKCAGCAYELGRHHALTGAQKAYDDSVLTQISDSQAGAVRHKDAFESYNHGYQSVFKIA
SIO_010081: LDL57_RS16670
subclass of: SO_0000673
so part of: LDL57_RS16670
location: complement(16111..16374)
location: region:16111-16374:-1
so has part: feature:16111-16374:-1:exon

WP_225505424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16111-16374:-1:exon

LDL57_RS16675
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16675
old locus tag: LDL57_16675
so part of: sequence
location: 16716..16991
location: region:16716-16991:1
so has part: feature:16716-16991:1:exon
subclass of: SO_0000010

position:16716:1
position: 16716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16991:1
position: 16991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16716-16991:1:exon

LDL57_RS16675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16675
old locus tag: LDL57_16675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDERIEVLESRIAELEKQFTEMNKVNCCTKSEHGVNAIVQNVLDLTRVKKATSNFKTNCKVNYQHSVDAGCVLKLICVNQLNIFNYVFHYW
SIO_010081: LDL57_RS16675
subclass of: SO_0000673
so part of: LDL57_RS16675
location: 16716..16991
location: region:16716-16991:1
so has part: feature:16716-16991:1:exon

WP_225507904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16716-16991:1:exon

LDL57_RS16680
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16680
old locus tag: LDL57_16680
so part of: sequence
location: 17280..17501
location: region:17280-17501:1
so has part: feature:17280-17501:1:exon
subclass of: SO_0000010

position:17280:1
position: 17280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17501:1
position: 17501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17280-17501:1:exon

LDL57_RS16680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16680
old locus tag: LDL57_16680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015874049.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MRMSEKYSTPTAYLWGIMTTVLGFFTLEQWVAVIGIVCTIGTFLINVYYRKKEYKLKERQYENTEKNIDGNRR
SIO_010081: LDL57_RS16680
subclass of: SO_0000673
so part of: LDL57_RS16680
location: 17280..17501
location: region:17280-17501:1
so has part: feature:17280-17501:1:exon

WP_180560102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17280-17501:1:exon

LDL57_RS16685
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16685
old locus tag: LDL57_16685
so part of: sequence
location: 17461..17943
location: region:17461-17943:1
so has part: feature:17461-17943:1:exon
subclass of: SO_0000010

position:17461:1
position: 17461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17943:1
position: 17943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17461-17943:1:exon

LDL57_RS16685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16685
old locus tag: LDL57_16685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017628366.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysozyme
translation: MKIPKKILMATGGSALLLASSMITHFEGLRLKPYFDGGGVLSVCYGHTGNDIHRNRTYTQEDCDKWLDDDLKVVKRYVDPLVKVNINTLTQAALYSFAYNVGVGNFAKSTLLKKLNADDRKGACEEMKRWVYVDGRKWKGLMTRREIESVICYGDLTHLA
SIO_010081: LDL57_RS16685
subclass of: SO_0000673
so part of: LDL57_RS16685
location: 17461..17943
location: region:17461-17943:1
so has part: feature:17461-17943:1:exon

WP_225505422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17461-17943:1:exon

LDL57_RS16690
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16690
old locus tag: LDL57_16690
so part of: sequence
location: 17913..18359
location: region:17913-18359:1
so has part: feature:17913-18359:1:exon
subclass of: SO_0000010

position:17913:1
position: 17913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18359:1
position: 18359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17913-18359:1:exon

LDL57_RS16690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16690
old locus tag: LDL57_16690
inference: COORDINATES: protein motif:HMM:NF015218.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysis protein
translation: MLWRPYAFGVAIIGLVLSLIFTNSRYQTVKQNYHTLKQQYQAQIEALKLQQQKIDALHQLDIEHTEELNNAKAQITKLNDAVRAGTKRLRVNAVCHTSKTTTAKSRYDEATPQFGEAARQDYFRLRAMMIENEKQTEYLQQYINTQCQ
SIO_010081: LDL57_RS16690
subclass of: SO_0000673
so part of: LDL57_RS16690
location: 17913..18359
location: region:17913-18359:1
so has part: feature:17913-18359:1:exon

WP_225505420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17913-18359:1:exon

LDL57_RS16695
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16695
old locus tag: LDL57_16695
so part of: sequence
location: 18540..19127
location: region:18540-19127:1
so has part: feature:18540-19127:1:exon
subclass of: SO_0000010

position:18540:1
position: 18540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19127:1
position: 19127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18540-19127:1:exon

LDL57_RS16695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16695
old locus tag: LDL57_16695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015835241.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bro-N domain-containing protein
translation: MSKTLVFKNIEVMPFDNRDGKIWFTSTSLASLLEYADVKSVSKIYSRNKDEFTDEMSQVVKMTTCDKSKGYDNWETEVRIFSLRGAHLIGMLSKTKVAKALRKWLLDLAEKESHPANLALLDMEGLKSLTIGEMQNRLVAANKWSFDNFGRKGSDLMNLRKRHLNKIRKAEKTIMALSQLRLPGFDDTPNGESQA
SIO_010081: LDL57_RS16695
subclass of: SO_0000673
so part of: LDL57_RS16695
location: 18540..19127
location: region:18540-19127:1
so has part: feature:18540-19127:1:exon

WP_225507906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18540-19127:1:exon

LDL57_RS16700
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16700
old locus tag: LDL57_16700
so part of: sequence
location: 19839..20351
location: region:19839-20351:1
so has part: feature:19839-20351:1:exon
subclass of: SO_0000010

position:19839:1
position: 19839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20351:1
position: 20351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19839-20351:1:exon

LDL57_RS16700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16700
old locus tag: LDL57_16700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004242355.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: terminase small subunit
translation: MALTDKQEAFCREYLIDLNATQAAIRAGYSEKTAKDIACQNLAKLNIQKRIQTLMEERKNRIEVNADYVLKRLVEIDQMDVLDILTDSGDLRPIKDWPKVWRTTLSGLDIAAIRVDGAEALLKKVKWPDKVKNLELLGKHVSVQAFREQVKNEHDVVGTLSNLMDELSQK
SIO_010081: LDL57_RS16700
subclass of: SO_0000673
so part of: LDL57_RS16700
location: 19839..20351
location: region:19839-20351:1
so has part: feature:19839-20351:1:exon

WP_180560413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19839-20351:1:exon

LDL57_RS16705
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16705
old locus tag: LDL57_16705
pseudo: true
so part of: sequence
location: 20354..21840
location: region:20354-21840:1
so has part: feature:20354-21840:1:exon
subclass of: SO_0000010

position:20354:1
position: 20354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21840:1
position: 21840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20354-21840:1:exon

LDL57_RS16705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16705
old locus tag: LDL57_16705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004245976.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: terminase
SIO_010081: LDL57_RS16705
subclass of: SO_0000673
so part of: LDL57_RS16705
location: 20354..21840
location: region:20354-21840:1
so has part: feature:20354-21840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20354-21840:1:exon

LDL57_RS16710
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16710
old locus tag: LDL57_16710
pseudo: true
so part of: sequence
location: 21840..23208
location: region:21840-23208:1
so has part: feature:21840-23208:1:exon
subclass of: SO_0000010

position:23208:1
position: 23208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21840-23208:1:exon

LDL57_RS16710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16710
old locus tag: LDL57_16710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004245975.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4055 domain-containing protein
SIO_010081: LDL57_RS16710
subclass of: SO_0000673
so part of: LDL57_RS16710
location: 21840..23208
location: region:21840-23208:1
so has part: feature:21840-23208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21840-23208:1:exon

LDL57_RS16715
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16715
old locus tag: LDL57_16715
pseudo: true
so part of: sequence
location: 23205..24328
location: region:23205-24328:1
so has part: feature:23205-24328:1:exon
subclass of: SO_0000010

position:23205:1
position: 23205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24328:1
position: 24328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23205-24328:1:exon

LDL57_RS16715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16715
old locus tag: LDL57_16715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211721.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage head morphogenesis protein
SIO_010081: LDL57_RS16715
subclass of: SO_0000673
so part of: LDL57_RS16715
location: 23205..24328
location: region:23205-24328:1
so has part: feature:23205-24328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23205-24328:1:exon

LDL57_RS16720
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16720
old locus tag: LDL57_16720
so part of: sequence
location: 24444..25214
location: region:24444-25214:1
so has part: feature:24444-25214:1:exon
subclass of: SO_0000010

position:24444:1
position: 24444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25214:1
position: 25214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24444-25214:1:exon

LDL57_RS16720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16720
old locus tag: LDL57_16720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004190654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSILNIGSNYHSSVEDPNGGGGASGTAITPEVQAIIDKQINEQVTGLKAKNSELLGLLKKQTDNLKRFEGIDPEQVKGILQRFDNDEEAKLIAEGKIDEVINKRTERLRHDVEKKLQSEKRRAEKAEEFANKFRSRVLGDEIRAAASQSGALASAQEDLILRAKGIFKINDEGQAVAVDEENNPIMGKDGRTPLTPAEWIDSLKESAPHLFPSASGTGSGDSKSGGAHFKRSQMSSSDKAAYIRRFGREAYLGLPK
SIO_010081: LDL57_RS16720
subclass of: SO_0000673
so part of: LDL57_RS16720
location: 24444..25214
location: region:24444-25214:1
so has part: feature:24444-25214:1:exon

WP_225505417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24444-25214:1:exon

LDL57_RS16725
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16725
old locus tag: LDL57_16725
so part of: sequence
location: 25227..26453
location: region:25227-26453:1
so has part: feature:25227-26453:1:exon
subclass of: SO_0000010

position:25227:1
position: 25227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26453:1
position: 26453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25227-26453:1:exon

LDL57_RS16725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16725
old locus tag: LDL57_16725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211719.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: major capsid protein
translation: MATTVNSDLIIYNDLAQTAFLERRQDNLEVFNQASNGAIVLDNVFIEGDLRKRAFYQISGSIEHRDVNSTDKVTGKKIGAGESVDVKAPWKYGPYEITEESFKRRGRDVSEFSELVGTDAADASLEGYIKYSLAALGAAIGANTDMMVTANIATDGKKTLTKGLRKYGDKFNRVNLFVMHSTTYFDIVDQAIDNKVYEEAGVVIYGGQPGTLGKPVLVTDTAPVDAIFGLVPGAITITESQEPNFRSYEINDQENLGVGYRGEGVVNVGVLGYSWDESKGTNPDLTKLGTAGNWKKHFTSNKLTAGVMIKLQHEASLGLSVDKTTATANNSDAVTISLDYSKDNQPVQGGNVEWSSTGGKLSKAATKTDAKGKSSVKLTASTAGQFTVTATVDGEMRTTESITFHKEK
SIO_010081: LDL57_RS16725
subclass of: SO_0000673
so part of: LDL57_RS16725
location: 25227..26453
location: region:25227-26453:1
so has part: feature:25227-26453:1:exon

WP_225507309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25227-26453:1:exon

LDL57_RS16730
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16730
old locus tag: LDL57_16730
so part of: sequence
location: 26490..26825
location: region:26490-26825:1
so has part: feature:26490-26825:1:exon
subclass of: SO_0000010

position:26490:1
position: 26490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26825:1
position: 26825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26490-26825:1:exon

LDL57_RS16730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16730
old locus tag: LDL57_16730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDSDKNSPTFNSYASVEDLKRYARERGIDIPTDGSHIESMLVSAMDYLTSQPWLGKRTHLTQPLSFPRTGLFYDGVPIENDAIPKQLIMAQCRLAIESENEDLQPTLGAK
SIO_010081: LDL57_RS16730
subclass of: SO_0000673
so part of: LDL57_RS16730
location: 26490..26825
location: region:26490-26825:1
so has part: feature:26490-26825:1:exon

WP_225507873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26490-26825:1:exon

LDL57_RS16735
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16735
old locus tag: LDL57_16735
so part of: sequence
location: 26973..27326
location: region:26973-27326:1
so has part: feature:26973-27326:1:exon
subclass of: SO_0000010

position:26973:1
position: 26973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27326:1
position: 27326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26973-27326:1:exon

LDL57_RS16735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16735
old locus tag: LDL57_16735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMNLYTRMGKTTERLIKQYGMEYVLKRKGKFYVDKKGQEIIEPDMVLKAVGVKTQFAINEVDNSLVLTSDIKFIAHAKSNIQQGDIIIIDNRNHRVIAVKEIKPQRQTICFIAQLRA
SIO_010081: LDL57_RS16735
subclass of: SO_0000673
so part of: LDL57_RS16735
location: 26973..27326
location: region:26973-27326:1
so has part: feature:26973-27326:1:exon

WP_225507219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26973-27326:1:exon

LDL57_RS16740
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16740
old locus tag: LDL57_16740
so part of: sequence
location: 27328..27813
location: region:27328-27813:1
so has part: feature:27328-27813:1:exon
subclass of: SO_0000010

position:27328:1
position: 27328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27813:1
position: 27813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27328-27813:1:exon

LDL57_RS16740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16740
old locus tag: LDL57_16740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006660974.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNNFTAAINAFVSKAEEKMEVVTKVTFIKILARLVMMSPVGNPSIWQVNAKIAGKGKGKERKPAGYTGGRFRGNWQVTFDEVPMKETGRIDKSGEVTQAEGNHVIGQFKVGMKSVYFSNVVPYAYRLEMGHSKQAPKGMVRLTAQEFQQFFHQAIAERKG
SIO_010081: LDL57_RS16740
subclass of: SO_0000673
so part of: LDL57_RS16740
location: 27328..27813
location: region:27328-27813:1
so has part: feature:27328-27813:1:exon

WP_180560421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27328-27813:1:exon

LDL57_RS16745
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16745
old locus tag: LDL57_16745
so part of: sequence
location: 27810..28211
location: region:27810-28211:1
so has part: feature:27810-28211:1:exon
subclass of: SO_0000010

position:27810:1
position: 27810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28211:1
position: 28211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27810-28211:1:exon

LDL57_RS16745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16745
old locus tag: LDL57_16745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247504.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail terminator-like protein
translation: MNPLTINTAIRAHIAQFAESENIKVAWPNCEFDDINEPYLQLHTMPATTNNLSLSLDMPVFSGVIQINVVGKAGTGDALVMNVANRLINFLTNGFSLTDNLFLNGEPCLFPAICDQVNYILPVSVAYRCHSTI
SIO_010081: LDL57_RS16745
subclass of: SO_0000673
so part of: LDL57_RS16745
location: 27810..28211
location: region:27810-28211:1
so has part: feature:27810-28211:1:exon

WP_180560422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27810-28211:1:exon

LDL57_RS16750
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16750
old locus tag: LDL57_16750
so part of: sequence
location: 28261..28911
location: region:28261-28911:1
so has part: feature:28261-28911:1:exon
subclass of: SO_0000010

position:28261:1
position: 28261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28911:1
position: 28911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28261-28911:1:exon

LDL57_RS16750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16750
old locus tag: LDL57_16750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tube protein
translation: MAYNIPNGSRVYVASKYADEITITAATNATEAVLTVNSIGSIKTGDIVQIDCGWKKMSGAFKVKKAADTSITLESIDTTDKAVFPVGGAKGSLKKVEEWEAMPQVMTLSTEGGEQQTQEIQFLEDEQAETVDTFKNGITQVYTFAHDAKLPIRKLLMKLDDSKQITAMRFFNKRASEDRYFTASVSFQRVPNTAINEVENVVARFSLKSDLQIYAV
SIO_010081: LDL57_RS16750
subclass of: SO_0000673
so part of: LDL57_RS16750
location: 28261..28911
location: region:28261-28911:1
so has part: feature:28261-28911:1:exon

WP_180560423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28261-28911:1:exon

LDL57_RS16755
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16755
old locus tag: LDL57_16755
so part of: sequence
location: 28925..29230
location: region:28925-29230:1
so has part: feature:28925-29230:1:exon
subclass of: SO_0000010

position:28925:1
position: 28925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29230:1
position: 29230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28925-29230:1:exon

LDL57_RS16755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16755
old locus tag: LDL57_16755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004245960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail assembly chaperone
translation: MAKFTLIPKPTFKANVLIPVAGKKEPEVVTFTFNHKAMSELETMREMPIDEFYQQIIADWAIEEPYHADNLKLLFDNYPSAASAISTTYYSELLGQREKNF
SIO_010081: LDL57_RS16755
subclass of: SO_0000673
so part of: LDL57_RS16755
location: 28925..29230
location: region:28925-29230:1
so has part: feature:28925-29230:1:exon

WP_180560424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28925-29230:1:exon

LDL57_RS16760
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16760
old locus tag: LDL57_16760
so part of: sequence
location: 29257..29529
location: region:29257-29529:1
so has part: feature:29257-29529:1:exon
subclass of: SO_0000010

position:29257:1
position: 29257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29529:1
position: 29529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29257-29529:1:exon

LDL57_RS16760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16760
old locus tag: LDL57_16760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004245959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1799 domain-containing protein
translation: MTETDIRNFEAAFGFTPEDSEVEVWPDVWEAYLTFNALRTQWRMGANGPTGLDYSVLSDVIDYLGINQDKGALFNDIRVMEAKALAIMHQ
SIO_010081: LDL57_RS16760
subclass of: SO_0000673
so part of: LDL57_RS16760
location: 29257..29529
location: region:29257-29529:1
so has part: feature:29257-29529:1:exon

WP_225505409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29257-29529:1:exon

LDL57_RS16765
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16765
old locus tag: LDL57_16765
so part of: sequence
location: complement(29570..29821)
location: region:29570-29821:-1
so has part: feature:29570-29821:-1:exon
subclass of: SO_0000010

position:29570:-1
position: 29570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29821:-1
position: 29821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29570-29821:-1:exon

LDL57_RS16765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16765
old locus tag: LDL57_16765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001555939.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Arc family DNA-binding protein
translation: MARDDPQFNFRMPHEIKEKIKQRAKMNGRSINAELTQIVLDALDKSVTPQDYKTDIEKLVDSQAEEVKKMVFNTLLKLYDNKN
SIO_010081: LDL57_RS16765
subclass of: SO_0000673
so part of: LDL57_RS16765
location: complement(29570..29821)
location: region:29570-29821:-1
so has part: feature:29570-29821:-1:exon

WP_225507875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29570-29821:-1:exon

LDL57_RS16770
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16770
old locus tag: LDL57_16770
so part of: sequence
location: complement(29998..30591)
location: region:29998-30591:-1
so has part: feature:29998-30591:-1:exon
subclass of: SO_0000010

position:29998:-1
position: 29998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30591:-1
position: 30591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29998-30591:-1:exon

LDL57_RS16770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16770
old locus tag: LDL57_16770
inference: COORDINATES: protein motif:HMM:NF024949.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MNKSSAKKMNINEEEFSRLPFSQKITILRAYKSLTQAQLASLVGVSQRQIAAYESGNAKPRGNTLLKLGSVLGKSPIQLMHPVDNVSRPRMNVSFMPVLKHNRIIDWLHYTMDPTGKSDDLLDECVEREIKTIQSSGSFALEIDEPAMSTVGSNGICFPKKAIVIFDISKCNVLMDGDFVLAVINHKHTMFRQFFMV
SIO_010081: LDL57_RS16770
subclass of: SO_0000673
so part of: LDL57_RS16770
location: complement(29998..30591)
location: region:29998-30591:-1
so has part: feature:29998-30591:-1:exon

WP_225507877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29998-30591:-1:exon

LDL57_RS16775
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16775
old locus tag: LDL57_16775
pseudo: true
so part of: sequence
location: 30857..31705
location: region:30857-31705:1
so has part: feature:30857-31705:1:exon
subclass of: SO_0000010

position:30857:1
position: 30857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31705:1
position: 31705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30857-31705:1:exon

LDL57_RS16775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16775
old locus tag: LDL57_16775
inference: COORDINATES: protein motif:HMM:NF022022.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: LDL57_RS16775
subclass of: SO_0000673
so part of: LDL57_RS16775
location: 30857..31705
location: region:30857-31705:1
so has part: feature:30857-31705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30857-31705:1:exon

LDL57_RS16780
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16780
old locus tag: LDL57_16780
so part of: sequence
location: 31797..34760
location: region:31797-34760:1
so has part: feature:31797-34760:1:exon
subclass of: SO_0000010

position:31797:1
position: 31797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34760:1
position: 34760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31797-34760:1:exon

LDL57_RS16780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16780
old locus tag: LDL57_16780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006659237.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tape measure protein
translation: MTDIATISLKVNTADLERGEQKLKSFQGTAEKVEKASSNLEGGLKKVSLASLRNVETIKTQKSELNDLLNRINPTNKAFDELDKISRKLAASHQKGLLPLDQFVDYNTILEESRDKLSRMNLALTAEGRALLAQEEASKRAKLAADNFLNTLKQQSDTIGKTRTEVLELKAAQMGISQQAAPMIAKLKEQEKAFMNGAVTMGQYRHAMRMLPMQMTDVVTSLASGIPAWMVLVQQGGQIKDSFGGVGNAFKAIGSILTPTRLLMGGLAGVTAAVAIAAYKGSQEFSEFNNKLILTGGYAGKTAGQLAMLAKQLSADGITQGGMADVITKVVGSGSFSGNEIDNIANVAARMEKLVGQSVDETIKQFQRIKDNPVKAINELDKSLHFLTTTQLAQISTLQEQGRKHEAAKVAMEAYATATKNRTQQIKANLGYLESAWAVVKDKARLAWDSMLDIGREHTLDQKIRDYEEKLVAFQVNPVARLNYYNASGKTATDLRRELDLLKEKKYQQDIENQRKQAAVRAQEAEKARFRVDQELKHKFENAEEKHQSELERIRNSGGSKSVIDEAIRRENARYAKEKSSSDSKADAYRPSLGTRWEEEAQARNRALQAELRTLQDESQYVGIISQQRRELFKTENQLVILEEAKSGTNKRRLSEDERSLLLKKEAILSEKREAAQIGDKIEKQKQLNALRLSNDGLQEEIRLRLESIGKTEIQIAKEQELKKYREEMARKGIEQENPEYGRGLSLIDEKYKNEESLRKNWEAGIKQGFSNFEQQARDAYGNVANVTKFAFEGMSQSLTDFLVTGKANFADFTKSLLEMIVKLMTQMAMLQAMKAAFGGQTGGVGGAIANIFGFSSGGYVGGGGKYDPKGIVHGGEFVFTKEATQRLGIANLYRLMDGSKRGYASGGYVSTSSTPMYGMQPVTNGVNVNLGGIHVDGQPQQSSPSNVDMRAAEQSLTQKIKSVLVAESRDGGDLHKIIKAVNGRGY
SIO_010081: LDL57_RS16780
subclass of: SO_0000673
so part of: LDL57_RS16780
location: 31797..34760
location: region:31797-34760:1
so has part: feature:31797-34760:1:exon

WP_225507223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31797-34760:1:exon

LDL57_RS16785
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16785
old locus tag: LDL57_16785
so part of: sequence
location: 34864..35076
location: region:34864-35076:1
so has part: feature:34864-35076:1:exon
subclass of: SO_0000010

position:34864:1
position: 34864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35076:1
position: 35076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34864-35076:1:exon

LDL57_RS16785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16785
old locus tag: LDL57_16785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTLLFLIPTLFSGAVLAKAGESTLSFGYLNVKSGGEKELTEKADTTKPDPEGIATVYAIDILPHLHTS
SIO_010081: LDL57_RS16785
subclass of: SO_0000673
so part of: LDL57_RS16785
location: 34864..35076
location: region:34864-35076:1
so has part: feature:34864-35076:1:exon

WP_180560429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34864-35076:1:exon

LDL57_RS16790
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16790
old locus tag: LDL57_16790
pseudo: true
so part of: sequence
location: complement(35096..36297)
location: region:35096-36297:-1
so has part: feature:35096-36297:-1:exon
subclass of: SO_0000010

position:35096:-1
position: 35096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36297:-1
position: 36297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35096-36297:-1:exon

LDL57_RS16790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16790
old locus tag: LDL57_16790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LDL57_RS16790
subclass of: SO_0000673
so part of: LDL57_RS16790
location: complement(35096..36297)
location: region:35096-36297:-1
so has part: feature:35096-36297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35096-36297:-1:exon

LDL57_RS16800
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS16800
old locus tag: LDL57_16800
so part of: sequence
location: 36379..36783
location: region:36379-36783:1
so has part: feature:36379-36783:1:exon
subclass of: SO_0000010

position:36379:1
position: 36379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36783:1
position: 36783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36379-36783:1:exon

LDL57_RS16800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
gene: tnpA
locus tag: LDL57_RS16800
old locus tag: LDL57_16800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MQKYKINRSRHAAFLLHVHLVFVTKYRKKVLSGLHYKAFHQYAGEVCRDFGADLKESNGESDHVHMLIEYPPTVQLSVLVNSLKAVTSRRLRNEFLDLRGAYGKPVLWSRSYFAGSCGGAPLEVVKQYIQNQRG
SIO_010081: LDL57_RS16800
subclass of: SO_0000673
so part of: LDL57_RS16800
location: 36379..36783
location: region:36379-36783:1
so has part: feature:36379-36783:1:exon

WP_225505529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36379-36783:1:exon

LDL57_RS16805
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16805
old locus tag: LDL57_16805
so part of: sequence
location: 37008..37349
location: region:37008-37349:1
so has part: feature:37008-37349:1:exon
subclass of: SO_0000010

position:37008:1
position: 37008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37349:1
position: 37349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37008-37349:1:exon

LDL57_RS16805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16805
old locus tag: LDL57_16805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MDEFRWRTQIQDSPTGEYRHRIKEVEFGDGYKQVAADGIHPESQSWPFSYLGKKAEVMPIFDFIRQHTSKSFIWIPPFGVKGVYRVKADSIKMTPVARDVMKISATFEEAFSA
SIO_010081: LDL57_RS16805
subclass of: SO_0000673
so part of: LDL57_RS16805
location: 37008..37349
location: region:37008-37349:1
so has part: feature:37008-37349:1:exon

WP_180559778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37008-37349:1:exon

LDL57_RS16810
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16810
old locus tag: LDL57_16810
so part of: sequence
location: complement(37398..38528)
location: region:37398-38528:-1
so has part: feature:37398-38528:-1:exon
subclass of: SO_0000010

position:37398:-1
position: 37398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38528:-1
position: 38528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37398-38528:-1:exon

LDL57_RS16810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16810
old locus tag: LDL57_16810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000817271.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
translation: MKRAYKYRFYPTSEQVELLANTFGCVRFVYNSILRWRTDAYYERKEKISYIQANARLTALKKETDVQWLNSVSCVPLQQVLRHQQAAFSNFFSGRAKYPTFKTKHHKQSAEFTASAFKYRDGKLYIAKSKEPLDIRWSRELPSAPSTVTISKDASGRYFASCLCEFEPISLPVSEKMTGIDIGLKDLFVTDTGLKTGNPRHTTKYSKRLALLQRRLSKKKKGSNNRTKARLKVAKLHAKITDCRLDNLHKLSHRLINENQVVCVESLKVKNMIRNPKLSKAIADASWGEFVRQIEYKANWYGRTIVAIDQCFPSSKRCSDCGYTLSKLALNIRSWRCPECGVNHDRDINAAKNIKAAGLAVLALGEPISPKSLNAA
SIO_010081: LDL57_RS16810
subclass of: SO_0000673
so part of: LDL57_RS16810
location: complement(37398..38528)
location: region:37398-38528:-1
so has part: feature:37398-38528:-1:exon

WP_180559779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37398-38528:-1:exon

LDL57_RS16815
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16815
old locus tag: LDL57_16815
so part of: sequence
location: 38641..39384
location: region:38641-39384:1
so has part: feature:38641-39384:1:exon
subclass of: SO_0000010

position:38641:1
position: 38641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39384:1
position: 39384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38641-39384:1:exon

LDL57_RS16815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16815
old locus tag: LDL57_16815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014657918.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage minor tail protein L
translation: MIIHSDVQKLEPGEKIQLVEVDGNAFGGPVLRFHAYNLRYTPEEIEKAEDKLKPKPIWWQGNEYGAWPYEISGLSKSSEGSQARPILKVGNIDSLISSLCLEFDDMVQAKVTIYETFSHYLDRKNFPDDNPTENPDECFKQVFYVDRKSHEEAGGIIQFELACPFDLQGVMLPVRQIHNLCYWCMRGWYRSGNGCAYNGKRYFDEKGNSVDDPALDVCGGLMSDCKKRFGENVPLDFGGFPAAGLIR
SIO_010081: LDL57_RS16815
subclass of: SO_0000673
so part of: LDL57_RS16815
location: 38641..39384
location: region:38641-39384:1
so has part: feature:38641-39384:1:exon

WP_180559777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38641-39384:1:exon

LDL57_RS16820
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16820
old locus tag: LDL57_16820
so part of: sequence
location: 39381..40094
location: region:39381-40094:1
so has part: feature:39381-40094:1:exon
subclass of: SO_0000010

position:39381:1
position: 39381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40094:1
position: 40094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39381-40094:1:exon

LDL57_RS16820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16820
old locus tag: LDL57_16820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006657765.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C40 family peptidase
translation: MITKSLTEAIFNHVKKVFPQEACGVICQKSRVKRYFPCRNLAANPTEQFELSPEDYANAEDWGLPVAIVHSHCGDGVTTHPSEIDNLQCDASELPWVIVSWPEGDLRIIQPRGERELTGRTFVLGYSDCWTLIVDYFRQEHGITLNNYSVTYPWWEQGENRYMENFIKEGFVEINDISKVSDVVIMQVQSDVANHAGILLDNGMLLHHLYGQLSRVTPYSDYWRDRTVKIVRRKEWA
SIO_010081: LDL57_RS16820
subclass of: SO_0000673
so part of: LDL57_RS16820
location: 39381..40094
location: region:39381-40094:1
so has part: feature:39381-40094:1:exon

WP_225505393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39381-40094:1:exon

LDL57_RS16825
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16825
old locus tag: LDL57_16825
so part of: sequence
location: 40091..40699
location: region:40091-40699:1
so has part: feature:40091-40699:1:exon
subclass of: SO_0000010

position:40091:1
position: 40091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40699:1
position: 40699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40091-40699:1:exon

LDL57_RS16825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16825
old locus tag: LDL57_16825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013184185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tail assembly protein
translation: MSELRTVRLYGKLGTKYGRVHQLAISSPKEAIKALCVLYSGFERYLADAHLRGVEFAVFKGKHNIGEDEFHLDTTQDIRIAPIIKGSKNGGLFQTILGVAMIGAAMMLGPVGWAAFGAGGFMGGALALGGASMALGGIAQMLSPQPPGASVRQDADNKPSYAFGGAVNTTAQGNPVPLLYTLDRKEIGGAIISAGIYTEDQR
SIO_010081: LDL57_RS16825
subclass of: SO_0000673
so part of: LDL57_RS16825
location: 40091..40699
location: region:40091-40699:1
so has part: feature:40091-40699:1:exon

WP_225507321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40091-40699:1:exon

LDL57_RS16830
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16830
old locus tag: LDL57_16830
pseudo: true
so part of: sequence
location: 40751..>43711
location: region:40751-43711:1
so has part: feature:40751-43711:1:exon
subclass of: SO_0000010

position:40751:1
position: 40751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43711:1
position: 43711
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40751-43711:1:exon

LDL57_RS16830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16830
old locus tag: LDL57_16830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013184184.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: host specificity protein J
SIO_010081: LDL57_RS16830
subclass of: SO_0000673
so part of: LDL57_RS16830
location: 40751..>43711
location: region:40751-43711:1
so has part: feature:40751-43711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40751-43711:1:exon

LDL57_RS16835
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16835
old locus tag: LDL57_16835
so part of: sequence
location: 43964..44212
location: region:43964-44212:1
so has part: feature:43964-44212:1:exon
subclass of: SO_0000010

position:43964:1
position: 43964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44212:1
position: 44212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43964-44212:1:exon

LDL57_RS16835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16835
old locus tag: LDL57_16835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSFFKNGANIETLVVPVFFLDFITNGNGEKTYTIPENRSLKVLHSNTFSDGSAKKTEADIKGNKITYRNTSEERPLLVIAE
SIO_010081: LDL57_RS16835
subclass of: SO_0000673
so part of: LDL57_RS16835
location: 43964..44212
location: region:43964-44212:1
so has part: feature:43964-44212:1:exon

WP_225507879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43964-44212:1:exon

LDL57_RS16840
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16840
old locus tag: LDL57_16840
so part of: sequence
location: 44216..44881
location: region:44216-44881:1
so has part: feature:44216-44881:1:exon
subclass of: SO_0000010

position:44216:1
position: 44216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44881:1
position: 44881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44216-44881:1:exon

LDL57_RS16840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16840
old locus tag: LDL57_16840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYGGKIISEKGTVWISPDVTPLNLVKRVDLTITTGTFGQIIKTEIPNNRPIVFFTRVFSDKIGVAAVPLNSNGQWSLEIRAARNAKGTTESVKIRFYIFSNFVPKDVSSDWGIQYFNAKGELTWTGDMIPLEVYSGVAPNDSNYKVDVGFTCAVAPYFSASYTAGFIPSKPPVYIWITNAWKAYGNVISSYIVDNINSSSSGYDQFYSNNYYYIKASNYDY
SIO_010081: LDL57_RS16840
subclass of: SO_0000673
so part of: LDL57_RS16840
location: 44216..44881
location: region:44216-44881:1
so has part: feature:44216-44881:1:exon

WP_225507882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44216-44881:1:exon

LDL57_RS16845
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16845
old locus tag: LDL57_16845
so part of: sequence
location: complement(44911..45168)
location: region:44911-45168:-1
so has part: feature:44911-45168:-1:exon
subclass of: SO_0000010

position:44911:-1
position: 44911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45168:-1
position: 45168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44911-45168:-1:exon

LDL57_RS16845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16845
old locus tag: LDL57_16845
inference: COORDINATES: protein motif:HMM:TIGR01352.1
GO function: GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB family protein
translation: MKSVLILLIAYLYHSFCTAIEVDYPDRAWHLNQNGYVKVVYDIDENGSVENIKILESKPAFMFDQAVKKALYKQRFEKNKPKKIC
SIO_010081: LDL57_RS16845
subclass of: SO_0000673
so part of: LDL57_RS16845
location: complement(44911..45168)
location: region:44911-45168:-1
so has part: feature:44911-45168:-1:exon

WP_225507227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44911-45168:-1:exon

LDL57_RS16850
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16850
old locus tag: LDL57_16850
so part of: sequence
location: 45206..45760
location: region:45206-45760:1
so has part: feature:45206-45760:1:exon
subclass of: SO_0000010

position:45206:1
position: 45206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45760:1
position: 45760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45206-45760:1:exon

LDL57_RS16850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16850
old locus tag: LDL57_16850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIYNTGTITTASGSSVVKGTGTKWNSNNPLVSPGMLMLIKNGDINYPYMILAVNSDTELTLADKPTFSATDTTYSINLTEPNNNSDAARALVAANTYILYFLQNMDTWMGDNGVVEITLPSGKTVKLESIKALQELVEGKADASSVEEIKTAVEGKADASSVEEIKTAVEGKADASSVEEIKQQ
SIO_010081: LDL57_RS16850
subclass of: SO_0000673
so part of: LDL57_RS16850
location: 45206..45760
location: region:45206-45760:1
so has part: feature:45206-45760:1:exon

WP_225507883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45206-45760:1:exon

LDL57_RS16855
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16855
old locus tag: LDL57_16855
so part of: sequence
location: 45850..46224
location: region:45850-46224:1
so has part: feature:45850-46224:1:exon
subclass of: SO_0000010

position:45850:1
position: 45850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46224:1
position: 46224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45850-46224:1:exon

LDL57_RS16855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16855
old locus tag: LDL57_16855
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLNTGKIKAKNANNVTDHVFQDKNGTLMHVGDFGIGIVNPASLKDINVTLEAGFYSANGNATGVPSGAGGTNFIQSNGDNYCFQIGKENLTNDLKLRIKKKNVWSAWVNILTKANTTFDANGF
SIO_010081: LDL57_RS16855
subclass of: SO_0000673
so part of: LDL57_RS16855
location: 45850..46224
location: region:45850-46224:1
so has part: feature:45850-46224:1:exon

WP_225507885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45850-46224:1:exon

LDL57_RS16860
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16860
old locus tag: LDL57_16860
so part of: sequence
location: 46341..46655
location: region:46341-46655:1
so has part: feature:46341-46655:1:exon
subclass of: SO_0000010

position:46341:1
position: 46341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46655:1
position: 46655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46341-46655:1:exon

LDL57_RS16860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16860
old locus tag: LDL57_16860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYNSDGGWGTNSGASVPKNNNGLELIYIKDKILPDGNIEIQTFHRQHSHLPEDFQNWRVKEIINEKPVYYADGEQVDIPPSTWLDIRVEMPVDSIWNRQHAQN
SIO_010081: LDL57_RS16860
subclass of: SO_0000673
so part of: LDL57_RS16860
location: 46341..46655
location: region:46341-46655:1
so has part: feature:46341-46655:1:exon

WP_225505685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46341-46655:1:exon

LDL57_RS16865
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16865
old locus tag: LDL57_16865
so part of: sequence
location: complement(46680..47435)
location: region:46680-47435:-1
so has part: feature:46680-47435:-1:exon
subclass of: SO_0000010

position:46680:-1
position: 46680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47435:-1
position: 47435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46680-47435:-1:exon

LDL57_RS16865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16865
old locus tag: LDL57_16865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410952.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BRO family protein
translation: MKNFGPVLFNFHNNNVRVLLINDQPWFVASDISNSLNYLSAKDMVRNLDDDEKDRHIVPTLGGHQEMLIINESGLYSSILRSRKPEAKLFKKWVTNEVLPSIRKTGKYEHPKYQPEAHEKFSSKDTQNLARIIALMTQNFRFKQAWNNAIWYALREVTGIPSPYPMEVRLVPSIATECERIWHVTEALQDVIADAEKLAIKRIIRKRENADRVITEIENLLSQTTQDNQLMLNGALSNWHKAELTHFLQRC
SIO_010081: LDL57_RS16865
subclass of: SO_0000673
so part of: LDL57_RS16865
location: complement(46680..47435)
location: region:46680-47435:-1
so has part: feature:46680-47435:-1:exon

WP_225505385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46680-47435:-1:exon

LDL57_RS16870
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16870
old locus tag: LDL57_16870
so part of: sequence
location: complement(48020..48493)
location: region:48020-48493:-1
so has part: feature:48020-48493:-1:exon
subclass of: SO_0000010

position:48020:-1
position: 48020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48493:-1
position: 48493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48020-48493:-1:exon

LDL57_RS16870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16870
old locus tag: LDL57_16870
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNNDHHWLTHAMKLALVTGQRVSDVSKIKYKDIHDGKLWIIQQKTGAKIAIPLDIELYGIKLSKTIADCVNNSEFVINNNGNKITVERISKEFRRFRDISQLNWVGEPPSFHEIRSLSARLYTETMGSNFAQKLLGHKSATMTAKYQDDRNNSWIEI
SIO_010081: LDL57_RS16870
subclass of: SO_0000673
so part of: LDL57_RS16870
location: complement(48020..48493)
location: region:48020-48493:-1
so has part: feature:48020-48493:-1:exon

WP_255653921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48020-48493:-1:exon

LDL57_RS16875
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16875
old locus tag: LDL57_16875
so part of: sequence
location: complement(48670..49065)
location: region:48670-49065:-1
so has part: feature:48670-49065:-1:exon
subclass of: SO_0000010

position:48670:-1
position: 48670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49065:-1
position: 49065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48670-49065:-1:exon

LDL57_RS16875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16875
old locus tag: LDL57_16875
inference: COORDINATES: protein motif:HMM:NF020572.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008907 - integrase activity [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage integrase Arm DNA-binding domain-containing protein
translation: MTRIRKTKNRDLPPNLYKRNGYYSYRDPRTRKEYGLGRNKAYAINEAISANQLLMKAEKVKPLTERIDGQGTVYFHEFLDRYEEILKTRGLREKTLKDYKQRIGVIRKGFVNAPIQNITTETDCGFSSVIN
SIO_010081: LDL57_RS16875
subclass of: SO_0000673
so part of: LDL57_RS16875
location: complement(48670..49065)
location: region:48670-49065:-1
so has part: feature:48670-49065:-1:exon

WP_225507887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48670-49065:-1:exon

LDL57_RS16880
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16880
old locus tag: LDL57_16880
so part of: sequence
location: complement(49022..49264)
location: region:49022-49264:-1
so has part: feature:49022-49264:-1:exon
subclass of: SO_0000010

position:49022:-1
position: 49022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49264:-1
position: 49264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49022-49264:-1:exon

LDL57_RS16880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16880
old locus tag: LDL57_16880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014640122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excisionase
translation: MITLAEWNARRDRPRRMDTVRGWVRNGLIQPPPIKDGREYLVEECAIKVNSINEVSHKSMLLQRIGHDQNQKNKKSGFAP
SIO_010081: LDL57_RS16880
subclass of: SO_0000673
so part of: LDL57_RS16880
location: complement(49022..49264)
location: region:49022-49264:-1
so has part: feature:49022-49264:-1:exon

WP_225505456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49022-49264:-1:exon

LDL57_RS16885
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16885
old locus tag: LDL57_16885
so part of: sequence
location: complement(49429..50151)
location: region:49429-50151:-1
so has part: feature:49429-50151:-1:exon
subclass of: SO_0000010

position:49429:-1
position: 49429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50151:-1
position: 50151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49429-50151:-1:exon

LDL57_RS16885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16885
old locus tag: LDL57_16885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015971227.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antA/AntB antirepressor family protein
translation: MQNLINIETKNINGELIQTVNARDLHSFLEIKNHFKDWIKDRIEKYGFIENEDFVTFAEKTAKGRPSIEYAISINMAKELSMVERNEKGKQARQYFIECERKALEAVNPVEILNNPSAMRGLLLNYTEKVIALEHKIDEMKPQVEALKRISYSEGSLCITDAAKSLQMKPKALFSWLQGHDWIYWRVGGKSWVGYQDKIKQDLIEHKVTVVARNDGSEKLTEQVRITPKGLGKLSILISE
SIO_010081: LDL57_RS16885
subclass of: SO_0000673
so part of: LDL57_RS16885
location: complement(49429..50151)
location: region:49429-50151:-1
so has part: feature:49429-50151:-1:exon

WP_225507889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49429-50151:-1:exon

LDL57_RS16890
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16890
old locus tag: LDL57_16890
so part of: sequence
location: complement(50240..50503)
location: region:50240-50503:-1
so has part: feature:50240-50503:-1:exon
subclass of: SO_0000010

position:50240:-1
position: 50240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50503:-1
position: 50503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50240-50503:-1:exon

LDL57_RS16890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16890
old locus tag: LDL57_16890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKGSIMKLNIINLLITTFLFIGAAFAFELIVGHLAHADAVIDPQIRFKRGELGNIHLGGQELLVIGVMLVPALMIILGVFLDTLKK
SIO_010081: LDL57_RS16890
subclass of: SO_0000673
so part of: LDL57_RS16890
location: complement(50240..50503)
location: region:50240-50503:-1
so has part: feature:50240-50503:-1:exon

WP_225505454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50240-50503:-1:exon

LDL57_RS16895
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16895
old locus tag: LDL57_16895
so part of: sequence
location: complement(50701..51261)
location: region:50701-51261:-1
so has part: feature:50701-51261:-1:exon
subclass of: SO_0000010

position:50701:-1
position: 50701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51261:-1
position: 51261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50701-51261:-1:exon

LDL57_RS16895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16895
old locus tag: LDL57_16895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001066833.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF669 domain-containing protein
translation: MNHNIIFTYSEESALLTYQGGFINESGAYVITIAEAKLSKSDKGAEFIEFSGESEDGRKVNYLSICCKKNDGTVNPFGQNMVNAMMGCIGIQRVTSVAHNNNLVAPEFHGKKVGLVLQKVLRTKKNGDESYSFDIRMPFVANTGQTLLEKVENKPAQAVKNLLRTLKDRDERRPTHTPVNNEFNPF
SIO_010081: LDL57_RS16895
subclass of: SO_0000673
so part of: LDL57_RS16895
location: complement(50701..51261)
location: region:50701-51261:-1
so has part: feature:50701-51261:-1:exon

WP_225505810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50701-51261:-1:exon

LDL57_RS16900
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16900
old locus tag: LDL57_16900
pseudo: true
so part of: sequence
location: complement(51258..51937)
location: region:51258-51937:-1
so has part: feature:51258-51937:-1:exon
subclass of: SO_0000010

position:51258:-1
position: 51258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51937:-1
position: 51937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51258-51937:-1:exon

LDL57_RS16900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16900
old locus tag: LDL57_16900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020753290.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: LDL57_RS16900
subclass of: SO_0000673
so part of: LDL57_RS16900
location: complement(51258..51937)
location: region:51258-51937:-1
so has part: feature:51258-51937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51258-51937:-1:exon

LDL57_RS16905
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16905
old locus tag: LDL57_16905
so part of: sequence
location: complement(51940..52239)
location: region:51940-52239:-1
so has part: feature:51940-52239:-1:exon
subclass of: SO_0000010

position:51940:-1
position: 51940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52239:-1
position: 52239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51940-52239:-1:exon

LDL57_RS16905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16905
old locus tag: LDL57_16905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMPRLTDKRRCQSKEDAIAYAIQQMEATRQGKEPLSPSMKEKRQAMEMYDKEAKELEKLIIQSSPNTYNPIYVQNKEYNPFLDQELRDGPLGGKIRGD
SIO_010081: LDL57_RS16905
subclass of: SO_0000673
so part of: LDL57_RS16905
location: complement(51940..52239)
location: region:51940-52239:-1
so has part: feature:51940-52239:-1:exon

WP_225505452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51940-52239:-1:exon

LDL57_RS16910
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16910
old locus tag: LDL57_16910
so part of: sequence
location: complement(52236..52385)
location: region:52236-52385:-1
so has part: feature:52236-52385:-1:exon
subclass of: SO_0000010

position:52236:-1
position: 52236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52385:-1
position: 52385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52236-52385:-1:exon

LDL57_RS16910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16910
old locus tag: LDL57_16910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLFELTQLVKKQRKSNELKEHNKYEHQREVLGQQNVPVSWQDFRGDFT
SIO_010081: LDL57_RS16910
subclass of: SO_0000673
so part of: LDL57_RS16910
location: complement(52236..52385)
location: region:52236-52385:-1
so has part: feature:52236-52385:-1:exon

WP_225505451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52236-52385:-1:exon