Arsenophonus apicola strain ArsBeeUS plasmid pArsBee2, complete sequence.
type: Entry
definition: Arsenophonus apicola strain ArsBeeUS plasmid pArsBee2, complete sequence.
sequence version: NZ_CP084224.1
sequence date: 2022-09-04
sequence: sequence
division: CON
label: NZ_CP084224.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN21873137
keyword: RefSeq
source: Arsenophonus apicola
organism: Arsenophonus apicola
taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Morganellaceae; Arsenophonus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP084224.1.\nBacteria and source DNA available from Pol Nadal Jimenez, Institute\nof Infection, Veterinary and Ecological Sciences, University of\nLiverpool, Ic2 Liverpool Science Park, 146 Brownlow Hill,\nLiverpool, L3 5RF, UK.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Flye v. 2.8; Pilon v. 1.23\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 49.6x\nSequencing Technology :: Oxford Nanopore MinION; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/04/2022 11:51:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,553\nCDSs (total) :: 3,453\nGenes (coding) :: 3,222\nCDSs (with protein) :: 3,222\nGenes (RNA) :: 100\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 8\nPseudo Genes (total) :: 231\nCDSs (without protein) :: 231\nPseudo Genes (ambiguous residues) :: 0 of 231\nPseudo Genes (frameshifted) :: 136 of 231\nPseudo Genes (incomplete) :: 66 of 231\nPseudo Genes (internal stop) :: 64 of 231\nPseudo Genes (multiple problems) :: 33 of 231\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 59938
topology: circular
so has quality: SO_0000988
location: 1..59938
location: region:1-59938:1
RO_0002162: 2879119

NZ_CP084224
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN21873137
type: BioSample
SIO_000068: biosample

1
title: Culture and genomic analysis of Arsenophonus apicola sp. nov. isolated from the honeybee Apis mellifera
author: Nadal-Jimenez, P.
author: Siozios, S.
author: Frost, C.L.
author: Court, R.
author: Chrostek, E.
author: Drew, G.C.
author: Evans, J.D.
author: Hawthorne, D.J.
author: Burritt, J.B.
author: Hurst, G.D.D.
journal: Unpublished

2
title: Direct Submission
author: Siozios, S.
author: Frost, C.L.
author: Nadal-Jimenez, P.
author: Burritt, J.B.
author: Hurst, G.D.D.
journal: Submitted (27-SEP-2021) Evolution, Ecology and Behaviour, University of Liverpool, Crown Street, Biosciences building, Liverpool L69 7ZB, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59938:1
position: 59938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-59938:1:source
so part of: sequence
organism: Arsenophonus apicola
mol type: genomic DNA
strain: ArsBeeUS
isolation source: hemolymph
host: Apis mellifera
type material: type strain of Arsenophonus apicola
plasmid: pArsBee2
country: USA: Dunn County Wisconsin
lat lon: 44.952830 N 91.887010 W
collection date: 2016

2879119
type: Taxonomy
SIO_000068: taxonomy

LDL57_RS16150
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16150
old locus tag: LDL57_16150
so part of: sequence
location: join(59612..59938,1..57)
location: region:1-59938:1
so has part: feature:59612-59938:1:exon
so has part: feature:1-57:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:59612-59938:1:exon

position:59612:1
position: 59612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-57:1:exon

position:57:1
position: 57
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LDL57_RS16150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16150
old locus tag: LDL57_16150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNIYFVLFMSIFLMIIGCKEEYGKDFIGIWEQVEGNEFPSQLTIKLDNHVYHVDYKYFDLNVAEKKLNQETSDYFLGKTKEFPSKSKSFGKDSYRVKALEAKALSNTVGALGKRKISYAKAILCTN
SIO_010081: LDL57_RS16150
subclass of: SO_0000673
so part of: LDL57_RS16150
location: join(59612..59938,1..57)
location: region:1-59938:1
so has part: feature:59612-59938:1:exon
so has part: feature:1-57:1:exon

WP_225507812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59612-59938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-57:1:exon

LDL57_RS16155
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16155
old locus tag: LDL57_16155
so part of: sequence
location: 250..873
location: region:250-873:1
so has part: feature:250-873:1:exon
subclass of: SO_0000010

position:250:1
position: 250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873:1
position: 873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250-873:1:exon

LDL57_RS16155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16155
old locus tag: LDL57_16155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016809496.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MYIHGYLRASTKEQDALRAKNRMKAFVEEKGFRMASWYTENVSGASLQRPELLRLLDDAASGDIILIEQVDRLSRLDEKGWEKLKRLIQEKDLIVVSLDLPTSHIALTSNVGDEFTFVMLKAINGMMLDMLAAIARKDYLDRRRRQQEGIAKAKAVGKFRGRQADHQLHEKIIELRVNNRQSIRDTARLCGVSERTVIRIVKQKTFS
SIO_010081: LDL57_RS16155
subclass of: SO_0000673
so part of: LDL57_RS16155
location: 250..873
location: region:250-873:1
so has part: feature:250-873:1:exon

WP_006663401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250-873:1:exon

LDL57_RS16160
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16160
old locus tag: LDL57_16160
pseudo: true
so part of: sequence
location: 930..3904
location: region:930-3904:1
so has part: feature:930-3904:1:exon
subclass of: SO_0000010

position:930:1
position: 930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3904:1
position: 3904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930-3904:1:exon

LDL57_RS16160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16160
old locus tag: LDL57_16160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001556584.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: LDL57_RS16160
subclass of: SO_0000673
so part of: LDL57_RS16160
location: 930..3904
location: region:930-3904:1
so has part: feature:930-3904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:930-3904:1:exon

LDL57_RS16165
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16165
old locus tag: LDL57_16165
so part of: sequence
location: 4148..4411
location: region:4148-4411:1
so has part: feature:4148-4411:1:exon
subclass of: SO_0000010

position:4148:1
position: 4148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4411:1
position: 4411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4148-4411:1:exon

LDL57_RS16165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16165
old locus tag: LDL57_16165
inference: COORDINATES: protein motif:HMM:NF012774.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MRLIGIDAPELGQPFGRRSKQNLLHLSAKKQAEVMTEKQDRFGRWLGTLIIAGKNINTEQVRSGLAWAYRYHGKATNFRFLALEKKA
SIO_010081: LDL57_RS16165
subclass of: SO_0000673
so part of: LDL57_RS16165
location: 4148..4411
location: region:4148-4411:1
so has part: feature:4148-4411:1:exon

WP_225507814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4148-4411:1:exon

LDL57_RS16170
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16170
old locus tag: LDL57_16170
so part of: sequence
location: 4499..5092
location: region:4499-5092:1
so has part: feature:4499-5092:1:exon
subclass of: SO_0000010

position:4499:1
position: 4499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5092:1
position: 5092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4499-5092:1:exon

LDL57_RS16170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16170
old locus tag: LDL57_16170
inference: COORDINATES: protein motif:HMM:NF025677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase zinc-binding domain-containing protein
translation: MYIPRPAKLLFQYDDGWNLFIENNHVDEWQLLSFEKMLACSTCAMGVRRYCCSSPECSHSRFFCQTCKSKACSACGLKGTEQWIAQQRHILPDCEWQHITLTMPHLLWPFFNNNWCLLNQLFRCATRAMLKHAKRQGLEIGIFCALHTYGRQLNQHPHIHLSVTRGGLTQYDTWKPIAVYECGKRNTRRHFTVRKAG
SIO_010081: LDL57_RS16170
subclass of: SO_0000673
so part of: LDL57_RS16170
location: 4499..5092
location: region:4499-5092:1
so has part: feature:4499-5092:1:exon

WP_225507816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4499-5092:1:exon

LDL57_RS16175
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16175
old locus tag: LDL57_16175
so part of: sequence
location: complement(5732..8965)
location: region:5732-8965:-1
so has part: feature:5732-8965:-1:exon
subclass of: SO_0000010

position:5732:-1
position: 5732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8965:-1
position: 8965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5732-8965:-1:exon

LDL57_RS16175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16175
old locus tag: LDL57_16175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004951660.1
GO component: GO:0045203 - integral component of cell outer membrane [Evidence IEA]
GO function: GO:0015474 - autotransporter activity [Evidence IEA]
GO process: GO:0046819 - protein secretion by the type V secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter serine protease
translation: MVLISYTLNFMRSNKFLLILILLIITSNSPAYEKHIGIKKHFLSSWKTEEFNNQWGLDAINANYAYYYGYTGKDVPIGVLDAPIYKNHPEFTNVKNIINLVTKGKRAEKSNSDINIKVGDNFYFDGTLHLKNYEGQYESHGTSVASIIAGNRDGKGMHGVAFNAKIFNADIDDGYNTIYSKIPLDRNIYYSAWQEFKKNKVRIINNSWSIGIPDAPNYEIYDSVSFSDSDAEKQFNHDIKSIIGTKLGGIYNGAIDLAHNGIIMVYGVGNDGNTNSPNALAGLPYFLPNILSHWVTVMGIAKKEDVTRLLRSDFIYDKLFILYENKFPGRKQDEEFYAFVDSIYEKSPNLIKEISSKFDDSNIPDWPIYQRSNRCGYTASFCVAAPADNIYSANIAGDNYNNISSGYRKGEGTSLAAPHVSGAIAILMERFPYLSAENITTIVKTTANDLGKKGIDEIYGWGLINLREAINGPKMFISPKDIPAEFYVPGSYTNTQFVVNIPGIGSIIDEGKLLKRICLYPTCAWDIWRNDITGHGGLTKEGSGTLVLTGNSTYRGPTLINNGILVVNGTLTSDVLIQKDGVLSGNGTIGSLSAHGTVAPGNSIGTLNVNHNVNFEPGSRYVVEVGQNVQSDRIQSSGAVTIDGGEVVVSLENKANLLSRQEGDSRLGHQYIILSAQQGVSGQFDRVASKHLFLSTELRYHPNQVTLSIGRNNKRFSSVAQTQNEREVANAADELSMGNPVYESILTSSTVDKARQAYRQLSGQINADIVSALVNNSRYLSKVLNGRLRQAKGLLSSSTIKANESGVWAQSLMAWEHASGNANATGYQGSTYGILFGFDSALATDWLLGIATGYTRTSLHGGYGSNAGSNNYHLAAYGNKQFGLLALCGGAIYTWHRIDTSRLVNYGVQSEREMAKYSGRTQQLFAEMSYRMEREWVNLEPFVNLAYINMENNQISEHGNAAALRGNKQHYDATVSMLGWRVDTERLVNKNTKIGLFSELGWQHQYGQLKPGARLRFKGGNAPFVVNSVPISRDRLALKVGLEVVVNKNAILSLSYDGLLSQQHQDNSVNAVFTWRF
SIO_010081: LDL57_RS16175
subclass of: SO_0000673
so part of: LDL57_RS16175
location: complement(5732..8965)
location: region:5732-8965:-1
so has part: feature:5732-8965:-1:exon

WP_225507818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5732-8965:-1:exon

LDL57_RS16180
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16180
old locus tag: LDL57_16180
so part of: sequence
location: complement(9041..9319)
location: region:9041-9319:-1
so has part: feature:9041-9319:-1:exon
subclass of: SO_0000010

position:9041:-1
position: 9041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9319:-1
position: 9319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9041-9319:-1:exon

LDL57_RS16180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16180
old locus tag: LDL57_16180
inference: COORDINATES: protein motif:HMM:NF024751.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MPVRNSCSHVFYSWITQSLIPVLPQKSVLFMDNVRFHKREDILQAIKKAGHQVEFLPPYSPDLNPIEHKWAQAKRKKRETGCDIDTLFSVYM
SIO_010081: LDL57_RS16180
subclass of: SO_0000673
so part of: LDL57_RS16180
location: complement(9041..9319)
location: region:9041-9319:-1
so has part: feature:9041-9319:-1:exon

WP_225507820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9041-9319:-1:exon

LDL57_RS16185
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16185
old locus tag: LDL57_16185
so part of: sequence
location: complement(9472..9819)
location: region:9472-9819:-1
so has part: feature:9472-9819:-1:exon
subclass of: SO_0000010

position:9472:-1
position: 9472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9819:-1
position: 9819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9472-9819:-1:exon

LDL57_RS16185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16185
old locus tag: LDL57_16185
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFVKKRFGKLLKNCPLPIKKTFSHPKADENLRKSFRQKVETYREQEKPLVFIDESGFSYDLPRNHGYSPKGQPCYGCKDWLAKGRTNAIGALLGTTLLTVTLFDGNINSLRVSHQ
SIO_010081: LDL57_RS16185
subclass of: SO_0000673
so part of: LDL57_RS16185
location: complement(9472..9819)
location: region:9472-9819:-1
so has part: feature:9472-9819:-1:exon

WP_180558373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9472-9819:-1:exon

LDL57_RS16190
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16190
old locus tag: LDL57_16190
so part of: sequence
location: complement(9743..10081)
location: region:9743-10081:-1
so has part: feature:9743-10081:-1:exon
subclass of: SO_0000010

position:9743:-1
position: 9743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10081:-1
position: 10081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9743-10081:-1:exon

LDL57_RS16190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16190
old locus tag: LDL57_16190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MTRYQLTVWQVIDLQRSCFVPIKKDKGLSIRETAKRFCIGSATVSRWIKQIKPKPAASRSRKIDKSALEKDVRQYPDAYQRERAIRFGVCQKAIWQALKKLSITYKKNIQPP
SIO_010081: LDL57_RS16190
subclass of: SO_0000673
so part of: LDL57_RS16190
location: complement(9743..10081)
location: region:9743-10081:-1
so has part: feature:9743-10081:-1:exon

WP_225507822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9743-10081:-1:exon

LDL57_RS16195
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16195
old locus tag: LDL57_16195
so part of: sequence
location: 10269..11327
location: region:10269-11327:1
so has part: feature:10269-11327:1:exon
subclass of: SO_0000010

position:10269:1
position: 10269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11327:1
position: 11327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10269-11327:1:exon

LDL57_RS16195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16195
old locus tag: LDL57_16195
inference: COORDINATES: protein motif:HMM:NF033538.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS91 family transposase
translation: MYIPRPAKLLFQYDDGWNLFIENNHVDEWQLLSFEKMLACSTCAMGVRRYCCSSPECSHSRFFCQTCKSKACSACGLKGTEQWIAQQRHILPDCEWQHITLTMPHLLWPFFNNNWCLLNQLFRCATRAMLKHAKRQGLEIGIFCALHTYGRQLNQHPHIHLSVTRGGLTQYDTWKPIFFKKKDVEKVWRSAVIRLLRDNYFQLQPNKLPGFGHIRNYQTWCRYLNAQFQRYWKVHFAKKTRGAWHNVKYLGRYLKRPPISASQLKHYSGGTVVHHYYDHHSQQYRRQTLSQEEMIRRYVSHIPARHFKMIRYYGFLANRKRGCLLPKVYEALDMISPNVPEKPGFGPLSKVF
SIO_010081: LDL57_RS16195
subclass of: SO_0000673
so part of: LDL57_RS16195
location: 10269..11327
location: region:10269-11327:1
so has part: feature:10269-11327:1:exon

WP_225507823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10269-11327:1:exon

LDL57_RS16200
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16200
old locus tag: LDL57_16200
so part of: sequence
location: complement(11702..12268)
location: region:11702-12268:-1
so has part: feature:11702-12268:-1:exon
subclass of: SO_0000010

position:11702:-1
position: 11702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12268:-1
position: 12268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11702-12268:-1:exon

LDL57_RS16200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16200
old locus tag: LDL57_16200
inference: COORDINATES: protein motif:HMM:NF016255.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ProQ/FINO family protein
translation: MTERQKLSLNRPRRVSEETTPKSSPVYRKKVWVNSAPKKQVKKPKPQKPVKPVTQKRVEKSQPVVKIKIPKPTKPPKKRLPLAEAISQISIFWPDLFPEHQLRPMKIGIQQDMWQEVKEKCLPITRRRLRVCLGSIGHHADCRALIQLGANRYDKNGQVAGEVTQADVEDNLKRLARLKKNHFHNPLI
SIO_010081: LDL57_RS16200
subclass of: SO_0000673
so part of: LDL57_RS16200
location: complement(11702..12268)
location: region:11702-12268:-1
so has part: feature:11702-12268:-1:exon

WP_225507825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11702-12268:-1:exon

LDL57_RS16205
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16205
old locus tag: LDL57_16205
so part of: sequence
location: complement(12270..13223)
location: region:12270-13223:-1
so has part: feature:12270-13223:-1:exon
subclass of: SO_0000010

position:12270:-1
position: 12270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13223:-1
position: 13223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12270-13223:-1:exon

LDL57_RS16205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16205
old locus tag: LDL57_16205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873870.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MSKKFTPTPHDSLFKQFLSEKETAKDFFDIWLPNEIKSLCDLNSLKVESGSFIDSEMKNYQSDILYSVKTEKGKGYFYLLIEHQSTPDKLMAWRLMRYCMAAMQKHLEAGHKKLPLVFPILFYTGEKSPYPYSTDWLDCFSGRDIAEKIYTKPFRLVDVTTLDDGEIMQHKRMALLELVQKHIRRRDMTELLSEIVKLLSYNYYSDNQVITLFNYLIQEGNAEQPAKLIKEIAKQSEKHEEALMNIAQGLRQEGIQEGIQKGKLEGMQEGIQKGKLEGEKQASLKIARQMLESGMDRQSVMKFTSLTDSELKNLFKD
SIO_010081: LDL57_RS16205
subclass of: SO_0000673
so part of: LDL57_RS16205
location: complement(12270..13223)
location: region:12270-13223:-1
so has part: feature:12270-13223:-1:exon

WP_225507827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12270-13223:-1:exon

LDL57_RS16210
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16210
old locus tag: LDL57_16210
so part of: sequence
location: complement(13555..13875)
location: region:13555-13875:-1
so has part: feature:13555-13875:-1:exon
subclass of: SO_0000010

position:13555:-1
position: 13555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13875:-1
position: 13875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13555-13875:-1:exon

LDL57_RS16210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16210
old locus tag: LDL57_16210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKTNNALGVKSFLVFDINNQSSSKFFNTYDEAADYCIDNGISTFLEVGDFEYKKSEEISIKPKNFYFVPKNSDSIYVVDVNDFEEICESMTTGKIFINTNSNTIN
SIO_010081: LDL57_RS16210
subclass of: SO_0000673
so part of: LDL57_RS16210
location: complement(13555..13875)
location: region:13555-13875:-1
so has part: feature:13555-13875:-1:exon

WP_225507829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13555-13875:-1:exon

LDL57_RS16215
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16215
old locus tag: LDL57_16215
so part of: sequence
location: complement(13872..14144)
location: region:13872-14144:-1
so has part: feature:13872-14144:-1:exon
subclass of: SO_0000010

position:13872:-1
position: 13872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14144:-1
position: 14144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13872-14144:-1:exon

LDL57_RS16215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16215
old locus tag: LDL57_16215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010865085.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKTELINKVSEKSGLAKKDAEKVVNAFAETITESLKSGNSVQLVGFGSFQVKQRAERKGHNPQTGKAIKIAGTNIPSFKAGQKLKDAVK
SIO_010081: LDL57_RS16215
subclass of: SO_0000673
so part of: LDL57_RS16215
location: complement(13872..14144)
location: region:13872-14144:-1
so has part: feature:13872-14144:-1:exon

WP_225507784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13872-14144:-1:exon

LDL57_RS16220
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16220
old locus tag: LDL57_16220
so part of: sequence
location: 14844..15776
location: region:14844-15776:1
so has part: feature:14844-15776:1:exon
subclass of: SO_0000010

position:14844:1
position: 14844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15776:1
position: 15776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14844-15776:1:exon

LDL57_RS16220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16220
old locus tag: LDL57_16220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MINHTINQRVRNLKTLRPRKHEIDFFIADEIELSSFRDEMASMEHPFFALKAGDTKVREYKNGFTKVTVRPAAEIGLATVFDKDIWIYAISKLQEAINNNQPISRTVCFTPYDFFVTTNRSKSGKGYDDLKKALRRLKGTTIETNIIYSEEKQESIGFGLIDSWRILDEKKGQLDVGMIEVTLPDWLYQALHKKKMLKISPDYFRIRKAIDRRLYEIARKHCGNQGEFTIALEKLHLKTGSTSLLKMFRHNLKQLAQTNDLPDYEVLFDPFSDKVTFKNRNQNCTKVEASRKREKGKKEIFKIKNNILKK
SIO_010081: LDL57_RS16220
subclass of: SO_0000673
so part of: LDL57_RS16220
location: 14844..15776
location: region:14844-15776:1
so has part: feature:14844-15776:1:exon

WP_225507831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14844-15776:1:exon

LDL57_RS16225
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16225
old locus tag: LDL57_16225
so part of: sequence
location: complement(15883..16149)
location: region:15883-16149:-1
so has part: feature:15883-16149:-1:exon
subclass of: SO_0000010

position:15883:-1
position: 15883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16149:-1
position: 16149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15883-16149:-1:exon

LDL57_RS16225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16225
old locus tag: LDL57_16225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002706468.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MAIQKPPKRNDEKHDKSLEKFINSAPDSLIQRKGVKKGKKQQITVTITPEIIEQLDKKAEETGLSRAALINIGIRHILNQGTTVGGKE
SIO_010081: LDL57_RS16225
subclass of: SO_0000673
so part of: LDL57_RS16225
location: complement(15883..16149)
location: region:15883-16149:-1
so has part: feature:15883-16149:-1:exon

WP_225507833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15883-16149:-1:exon

LDL57_RS16230
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16230
old locus tag: LDL57_16230
so part of: sequence
location: complement(16186..16830)
location: region:16186-16830:-1
so has part: feature:16186-16830:-1:exon
subclass of: SO_0000010

position:16186:-1
position: 16186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16830:-1
position: 16830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16186-16830:-1:exon

LDL57_RS16230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16230
old locus tag: LDL57_16230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018289586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MILTVGNTKGGVGKTTLAINIAAARAIQGKDVFLIDADRQKTAQTAISIRANNEITPGIACSSYSDGPILRSQLLQQKDKYDDVIIDAGGRDSTALRAALILSDILLIPYRPGSFDVWALQDISDLISEARSIRDGLQVYCIINAADANPNSIDNKDASEIILDYPELKFIPHHIVGRKAFSNAAGSGLCVFEIKPQDEKANKELHTIMNILYK
SIO_010081: LDL57_RS16230
subclass of: SO_0000673
so part of: LDL57_RS16230
location: complement(16186..16830)
location: region:16186-16830:-1
so has part: feature:16186-16830:-1:exon

WP_225507836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16186-16830:-1:exon

LDL57_RS16235
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16235
old locus tag: LDL57_16235
so part of: sequence
location: 17470..17874
location: region:17470-17874:1
so has part: feature:17470-17874:1:exon
subclass of: SO_0000010

position:17470:1
position: 17470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17874:1
position: 17874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17470-17874:1:exon

LDL57_RS16235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16235
old locus tag: LDL57_16235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASTYIDHLTGEILTEPEFVKVYIRDLCRVKGINATQYKIFNFMLLNMNYENVVAYGSKTKAAFLKANDLKLQTFNNNINFLIFAGLIERISRGEFRVNKKYAVKVDWTRVQSIEWTSVYSRNGISDKVKINQG
SIO_010081: LDL57_RS16235
subclass of: SO_0000673
so part of: LDL57_RS16235
location: 17470..17874
location: region:17470-17874:1
so has part: feature:17470-17874:1:exon

WP_225507838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17470-17874:1:exon

LDL57_RS16240
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16240
old locus tag: LDL57_16240
so part of: sequence
location: 18078..18233
location: region:18078-18233:1
so has part: feature:18078-18233:1:exon
subclass of: SO_0000010

position:18078:1
position: 18078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18233:1
position: 18233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18078-18233:1:exon

LDL57_RS16240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16240
old locus tag: LDL57_16240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: HNH endonuclease signature motif containing protein
translation: MRKVERAGKRIKAELHHINPIKNNGAVYDVDNLSVVTPKRHLEIHSKTRDK
SIO_010081: LDL57_RS16240
subclass of: SO_0000673
so part of: LDL57_RS16240
location: 18078..18233
location: region:18078-18233:1
so has part: feature:18078-18233:1:exon

WP_225507840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18078-18233:1:exon

LDL57_RS16245
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16245
old locus tag: LDL57_16245
so part of: sequence
location: 18235..18489
location: region:18235-18489:1
so has part: feature:18235-18489:1:exon
subclass of: SO_0000010

position:18235:1
position: 18235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18489:1
position: 18489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18235-18489:1:exon

LDL57_RS16245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16245
old locus tag: LDL57_16245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011336439.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacteriocin immunity protein
translation: MTNKIISDYTEKEFLKFVRGIYNDIYPTEEDHINAVMEFERLSEHPSGSDLLYYPEKGNEGPEDVVGIIKEWRAKNGKPGFKPE
SIO_010081: LDL57_RS16245
subclass of: SO_0000673
so part of: LDL57_RS16245
location: 18235..18489
location: region:18235-18489:1
so has part: feature:18235-18489:1:exon

WP_225507842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18235-18489:1:exon

LDL57_RS16250
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16250
old locus tag: LDL57_16250
so part of: sequence
location: 19018..19281
location: region:19018-19281:1
so has part: feature:19018-19281:1:exon
subclass of: SO_0000010

position:19018:1
position: 19018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19281:1
position: 19281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19018-19281:1:exon

LDL57_RS16250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16250
old locus tag: LDL57_16250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002212004.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: immunity protein
translation: MIDLENIYKNESVEDVLLYFALRTPYPTIDRMYVKYNFEVAATGELLQTHHRLFNEGKLKKTSSPLPEKGPNWKEPKFVTEKKYGIK
SIO_010081: LDL57_RS16250
subclass of: SO_0000673
so part of: LDL57_RS16250
location: 19018..19281
location: region:19018-19281:1
so has part: feature:19018-19281:1:exon

WP_225507860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19018-19281:1:exon

LDL57_RS16255
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16255
old locus tag: LDL57_16255
so part of: sequence
location: 19303..20100
location: region:19303-20100:1
so has part: feature:19303-20100:1:exon
subclass of: SO_0000010

position:19303:1
position: 19303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20100:1
position: 20100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19303-20100:1:exon

LDL57_RS16255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16255
old locus tag: LDL57_16255
inference: COORDINATES: protein motif:HMM:NF018642.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-type pyocin domain-containing protein
translation: MGKGGKEARVWVVESVINPATGLYGITLPDEQGNQGRTVLINPINAPGTQGLGPLLHPEKQQVVILNTGNNQPVKNPIVRVYPNLIPPDVETPVTVPPLENGYQPLYVMFNNHYGETNAKGKYSGRYFHTDRAGGPILDLDWRTAIIDQAGINKVKLHTSRFGDAPENRVMIDRLEKISQGKMQATDIDKRFYTHEIRELERYRNLGIKDGELPKSIIEKKSVWNNTHTAALEDYKINEKNEPLYTEEAIQYAYEQELKSALKGG
SIO_010081: LDL57_RS16255
subclass of: SO_0000673
so part of: LDL57_RS16255
location: 19303..20100
location: region:19303-20100:1
so has part: feature:19303-20100:1:exon

WP_225507862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19303-20100:1:exon

LDL57_RS16260
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16260
old locus tag: LDL57_16260
so part of: sequence
location: 20103..20360
location: region:20103-20360:1
so has part: feature:20103-20360:1:exon
subclass of: SO_0000010

position:20103:1
position: 20103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20360:1
position: 20360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20103-20360:1:exon

LDL57_RS16260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16260
old locus tag: LDL57_16260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015377593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: immunity protein
translation: MSLKEIIKNESVKDVLTFLGTTCDFRQLDRLYTYNRFEVVTSGELSSTYDELFEKGVFSEVNGKVVKGPNWKEPKFVTEKKYGIK
SIO_010081: LDL57_RS16260
subclass of: SO_0000673
so part of: LDL57_RS16260
location: 20103..20360
location: region:20103-20360:1
so has part: feature:20103-20360:1:exon

WP_225507844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20103-20360:1:exon

LDL57_RS16265
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16265
old locus tag: LDL57_16265
pseudo: true
so part of: sequence
location: <20391..21116
location: region:20391-21116:1
so has part: feature:20391-21116:1:exon
subclass of: SO_0000010

position:20391:1
position: 20391
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:21116:1
position: 21116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20391-21116:1:exon

LDL57_RS16265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16265
old locus tag: LDL57_16265
inference: COORDINATES: protein motif:HMM:NF018642.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: S-type pyocin domain-containing protein
SIO_010081: LDL57_RS16265
subclass of: SO_0000673
so part of: LDL57_RS16265
location: <20391..21116
location: region:20391-21116:1
so has part: feature:20391-21116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20391-21116:1:exon

LDL57_RS16270
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16270
old locus tag: LDL57_16270
so part of: sequence
location: 21118..21375
location: region:21118-21375:1
so has part: feature:21118-21375:1:exon
subclass of: SO_0000010

position:21118:1
position: 21118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21375:1
position: 21375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21118-21375:1:exon

LDL57_RS16270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16270
old locus tag: LDL57_16270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005162675.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacteriocin immunity protein
translation: MNKKNISDYTEKEFLGLVRKLFDVENTSEKEDVRNILEFKRLSEHPDGSDLIYYPKENREDTPEGVVKEVKEWREKNGKPGFKPE
SIO_010081: LDL57_RS16270
subclass of: SO_0000673
so part of: LDL57_RS16270
location: 21118..21375
location: region:21118-21375:1
so has part: feature:21118-21375:1:exon

WP_225507846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21118-21375:1:exon

LDL57_RS16275
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16275
old locus tag: LDL57_16275
so part of: sequence
location: 21450..21965
location: region:21450-21965:1
so has part: feature:21450-21965:1:exon
subclass of: SO_0000010

position:21450:1
position: 21450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21965:1
position: 21965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21450-21965:1:exon

LDL57_RS16275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16275
old locus tag: LDL57_16275
inference: COORDINATES: protein motif:HMM:NF013632.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A24 family peptidase
translation: MAFGCPTITHTLFSLIFYAFLALFFYLDAASRCLPRCFTLAFGLIGSGFRFLLSPESVLPSLLTALILFAVLFGLRALAHNKEGHPKFGLGDVYLMAILGMWLSLPIVLWVIIGAVFLAGFVLLARRLGYPKRWQQDDDFRRLTFAPFLCSVAALIHCYFKLLVLPVKLVL
SIO_010081: LDL57_RS16275
subclass of: SO_0000673
so part of: LDL57_RS16275
location: 21450..21965
location: region:21450-21965:1
so has part: feature:21450-21965:1:exon

WP_225507848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21450-21965:1:exon

LDL57_RS16280
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16280
old locus tag: LDL57_16280
so part of: sequence
location: 22009..22674
location: region:22009-22674:1
so has part: feature:22009-22674:1:exon
subclass of: SO_0000010

position:22009:1
position: 22009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22674:1
position: 22674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22009-22674:1:exon

LDL57_RS16280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16280
old locus tag: LDL57_16280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKITHTPISYPSYLNEDKNKTEKDENNPADTPSSYDVAPEKSDKESRGNTGFHPDYLLHQQRQKERILSTVDNQKKRVKRGADDVIVVRASPVTPLNPLSGFSSLENLYPTFGNPAFDYAIKQEAFMKGKLNEEENHARTLLKKSNSLAIIGNSAQIAPVLSSAGAGSLVLTNPSGVSLLNQFTNAINTLNASASRLLSSAAANLAPLSAAADTAAMAVSR
SIO_010081: LDL57_RS16280
subclass of: SO_0000673
so part of: LDL57_RS16280
location: 22009..22674
location: region:22009-22674:1
so has part: feature:22009-22674:1:exon

WP_225507850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22009-22674:1:exon

LDL57_RS17865
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17865
so part of: sequence
location: 22678..22806
location: region:22678-22806:1
so has part: feature:22678-22806:1:exon
subclass of: SO_0000010

position:22678:1
position: 22678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22806:1
position: 22806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22678-22806:1:exon

LDL57_RS17865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVASILYPPKAGEGSDLAQGKTLDQFLSLSVPAKTIGLNDAP
SIO_010081: LDL57_RS17865
subclass of: SO_0000673
so part of: LDL57_RS17865
location: 22678..22806
location: region:22678-22806:1
so has part: feature:22678-22806:1:exon

WP_255653931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22678-22806:1:exon

LDL57_RS16285
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16285
old locus tag: LDL57_16285
so part of: sequence
location: 22796..23185
location: region:22796-23185:1
so has part: feature:22796-23185:1:exon
subclass of: SO_0000010

position:22796:1
position: 22796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23185:1
position: 23185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22796-23185:1:exon

LDL57_RS16285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16285
old locus tag: LDL57_16285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHPEKQQVVILNTGNNQPVKNPIVRVYPNLIPPDVETPVTVPPLENGYQPLYVMFNNPCYLPGVVTGNGKVITGIWLDKAGEELGAPIPSQIADKLRGKEFANFDQFRKTFWQEVAKDPELSGQFDPGN
SIO_010081: LDL57_RS16285
subclass of: SO_0000673
so part of: LDL57_RS16285
location: 22796..23185
location: region:22796-23185:1
so has part: feature:22796-23185:1:exon

WP_225507852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22796-23185:1:exon

LDL57_RS16290
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16290
old locus tag: LDL57_16290
so part of: sequence
location: 23216..23371
location: region:23216-23371:1
so has part: feature:23216-23371:1:exon
subclass of: SO_0000010

position:23216:1
position: 23216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23371:1
position: 23371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23216-23371:1:exon

LDL57_RS16290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16290
old locus tag: LDL57_16290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005280283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease signature motif containing protein
translation: MRKVERAGKRIKAELHHINPIKNNGAVYDVDNLSVVTPKRHLEIHSKTRDK
SIO_010081: LDL57_RS16290
subclass of: SO_0000673
so part of: LDL57_RS16290
location: 23216..23371
location: region:23216-23371:1
so has part: feature:23216-23371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23216-23371:1:exon

LDL57_RS16295
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16295
old locus tag: LDL57_16295
so part of: sequence
location: 23373..23627
location: region:23373-23627:1
so has part: feature:23373-23627:1:exon
subclass of: SO_0000010

position:23373:1
position: 23373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23627:1
position: 23627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23373-23627:1:exon

LDL57_RS16295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16295
old locus tag: LDL57_16295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011336439.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacteriocin immunity protein
translation: MTNKIISDYTEKEFLKFVRGIYNDIYPTEEDHINAVMEFERLSEHPSGSDLLYYPEKGNEGPEDVVGIIKEWRAKNGKPGFKPE
SIO_010081: LDL57_RS16295
subclass of: SO_0000673
so part of: LDL57_RS16295
location: 23373..23627
location: region:23373-23627:1
so has part: feature:23373-23627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23373-23627:1:exon

LDL57_RS16300
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16300
old locus tag: LDL57_16300
pseudo: true
so part of: sequence
location: 24158..>24256
location: region:24158-24256:1
so has part: feature:24158-24256:1:exon
subclass of: SO_0000010

position:24158:1
position: 24158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24256:1
position: 24256
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24158-24256:1:exon

LDL57_RS16300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16300
old locus tag: LDL57_16300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000684988.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: resolvase
SIO_010081: LDL57_RS16300
subclass of: SO_0000673
so part of: LDL57_RS16300
location: 24158..>24256
location: region:24158-24256:1
so has part: feature:24158-24256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24158-24256:1:exon

LDL57_RS16305
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16305
old locus tag: LDL57_16305
so part of: sequence
location: complement(24926..25579)
location: region:24926-25579:-1
so has part: feature:24926-25579:-1:exon
subclass of: SO_0000010

position:24926:-1
position: 24926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25579:-1
position: 25579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24926-25579:-1:exon

LDL57_RS16305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16305
old locus tag: LDL57_16305
inference: COORDINATES: protein motif:HMM:NF012976.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSRRLFLKYIMTAIGFSSFLAYIKSSYAVLNKNYTFDDNLFCKKTPKQIPGPYYRNLTLVRRHIIDSQEGIPLLIKFKVVDVSKNCKPVKNLCVNIWHCNSEGHYSGWDFINPNLEVMSDDIGSVPRTDEKNFLRGSQLTDSSGFVRFTTIYPGFYAGRATHIHFTITECLEKKEEVLVSQLYFPEDMNIEVYKSKYYPAERLTELIIRKMIITKI
SIO_010081: LDL57_RS16305
subclass of: SO_0000673
so part of: LDL57_RS16305
location: complement(24926..25579)
location: region:24926-25579:-1
so has part: feature:24926-25579:-1:exon

WP_225507854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24926-25579:-1:exon

LDL57_RS16310
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16310
old locus tag: LDL57_16310
so part of: sequence
location: 26336..27187
location: region:26336-27187:1
so has part: feature:26336-27187:1:exon
subclass of: SO_0000010

position:26336:1
position: 26336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27187:1
position: 27187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26336-27187:1:exon

LDL57_RS16310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16310
old locus tag: LDL57_16310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003836590.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vmh family MBL fold metallo-hydrolase
translation: MNIKNILFLLTFLSFSLFAEPLHLSVYNPQENGIFPVSSTLVSGPTEAILFDAQFNTKDGEKLVELIKNSRKVLKQIIITSGDPDFYFGLAPLAKAFPEAKVVASPKVVEHILATKDAKLKYWSPKIRDGAPKKLIVPQVTAETIFTVDGEPLELHHSNKSSAYVWIPANKAILGGTSISSGIHVWTADNQTIDSRNSWVNTLKEMENLKPLTVIPGHYLGERPKGDLAIKFTIDYLEKFEKALENHKDSNDVIKTMVAAYPQLAEKSSLELSAKVNTGEVKW
SIO_010081: LDL57_RS16310
subclass of: SO_0000673
so part of: LDL57_RS16310
location: 26336..27187
location: region:26336-27187:1
so has part: feature:26336-27187:1:exon

WP_225507856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26336-27187:1:exon

LDL57_RS16315
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16315
old locus tag: LDL57_16315
pseudo: true
so part of: sequence
location: complement(27415..>27696)
location: region:27415-27696:-1
so has part: feature:27415-27696:-1:exon
subclass of: SO_0000010

position:27415:-1
position: 27415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27696:-1
position: 27696
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27415-27696:-1:exon

LDL57_RS16315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16315
old locus tag: LDL57_16315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010646725.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1440 domain-containing protein
SIO_010081: LDL57_RS16315
subclass of: SO_0000673
so part of: LDL57_RS16315
location: complement(27415..>27696)
location: region:27415-27696:-1
so has part: feature:27415-27696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27415-27696:-1:exon

LDL57_RS16320
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16320
old locus tag: LDL57_16320
pseudo: true
so part of: sequence
location: complement(27709..28863)
location: region:27709-28863:-1
so has part: feature:27709-28863:-1:exon
subclass of: SO_0000010

position:27709:-1
position: 27709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28863:-1
position: 28863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27709-28863:-1:exon

LDL57_RS16320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16320
old locus tag: LDL57_16320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612263.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LDL57_RS16320
subclass of: SO_0000673
so part of: LDL57_RS16320
location: complement(27709..28863)
location: region:27709-28863:-1
so has part: feature:27709-28863:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27709-28863:-1:exon

LDL57_RS16325
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16325
old locus tag: LDL57_16325
so part of: sequence
location: complement(28907..30073)
location: region:28907-30073:-1
so has part: feature:28907-30073:-1:exon
subclass of: SO_0000010

position:28907:-1
position: 28907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30073:-1
position: 30073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28907-30073:-1:exon

LDL57_RS16325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16325
old locus tag: LDL57_16325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002375888.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-hydroxy-acid oxidizing protein
translation: MNAFIKVLLLGFLVLCCNLTIKAEPLKTISSSEKKIKIINLYELEKEAAEKLSIGALGYVKGGSEDEITLRDNTESFNRKNIIPNGLTGLNEVALKTKLFGIDLASPIILAPMAAHGLVHQEADKDTIKGTRKAGTIMSISTYSSVPIEKIAESAPNAPFFFQLYMSKDNNFNEYIIKKAKKAGAKAIILTIDSGVPGNREADIRNNYEYSVKTPNVTEFYAGKTVTQSEARAMRKLGFSAEDISYIKKISGLPVIVKGIESPEAAKIAIDARADGIWVSNHGGRQLDGAPSTFNMLPHIAKVVQKRVPIIFDSGVRRGSHVFKALANGADIVAIGRPALYGLALGGADGVYSVFQHLNEELETVMILAGTENVEAVKNNHLFDPNKP
SIO_010081: LDL57_RS16325
subclass of: SO_0000673
so part of: LDL57_RS16325
location: complement(28907..30073)
location: region:28907-30073:-1
so has part: feature:28907-30073:-1:exon

WP_225507858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28907-30073:-1:exon

LDL57_RS16330
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16330
old locus tag: LDL57_16330
so part of: sequence
location: complement(30091..30315)
location: region:30091-30315:-1
so has part: feature:30091-30315:-1:exon
subclass of: SO_0000010

position:30091:-1
position: 30091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30315:-1
position: 30315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30091-30315:-1:exon

LDL57_RS16330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16330
old locus tag: LDL57_16330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPLNTKTGQRAGGESRHPAATTMLGVLFYESQKNNERIERYANAYQFQQEVLKRLPAKIQKQFEEEATKLLNE
SIO_010081: LDL57_RS16330
subclass of: SO_0000673
so part of: LDL57_RS16330
location: complement(30091..30315)
location: region:30091-30315:-1
so has part: feature:30091-30315:-1:exon

WP_225507758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30091-30315:-1:exon

LDL57_RS16335
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16335
old locus tag: LDL57_16335
so part of: sequence
location: complement(30355..30879)
location: region:30355-30879:-1
so has part: feature:30355-30879:-1:exon
subclass of: SO_0000010

position:30355:-1
position: 30355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30879:-1
position: 30879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30355-30879:-1:exon

LDL57_RS16335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16335
old locus tag: LDL57_16335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTLPIWHEEPIGKKHNRGDFNCGNEVLNQFLYRHARQNHEKGGAKTYLAVNEHNEKILGYYCLSPASIAYEDVPEVIKRGLARHDVPVFRLGRLAVDFSVQGLGLGGQLLLAAGRRCLLVATQVGGVALVIDAKNERVAQWYASYGAIPLLDAKSTLMLPFKTLHAALSAAGKL
SIO_010081: LDL57_RS16335
subclass of: SO_0000673
so part of: LDL57_RS16335
location: complement(30355..30879)
location: region:30355-30879:-1
so has part: feature:30355-30879:-1:exon

WP_225507760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30355-30879:-1:exon

LDL57_RS16340
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16340
old locus tag: LDL57_16340
so part of: sequence
location: complement(30876..31154)
location: region:30876-31154:-1
so has part: feature:30876-31154:-1:exon
subclass of: SO_0000010

position:30876:-1
position: 30876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31154:-1
position: 31154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30876-31154:-1:exon

LDL57_RS16340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16340
old locus tag: LDL57_16340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MPQIPVENNDRMSLRIASEEKSLLIRAAALQHTNLTEFVLRNVLSVARKIIDENERLNLTRRDSLHVMELLDNPPAPNDKLMAAAFALPKKS
SIO_010081: LDL57_RS16340
subclass of: SO_0000673
so part of: LDL57_RS16340
location: complement(30876..31154)
location: region:30876-31154:-1
so has part: feature:30876-31154:-1:exon

WP_225507762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30876-31154:-1:exon

LDL57_RS16345
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16345
old locus tag: LDL57_16345
so part of: sequence
location: 31541..32818
location: region:31541-32818:1
so has part: feature:31541-32818:1:exon
subclass of: SO_0000010

position:31541:1
position: 31541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32818:1
position: 32818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31541-32818:1:exon

LDL57_RS16345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16345
old locus tag: LDL57_16345
inference: COORDINATES: protein motif:HMM:NF016785.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shufflon system plasmid conjugative transfer pilus tip adhesin PilV
translation: MSKIHQNRIKEIDRGFIALEVLGVLVIMALLALWGAEKYSEFLEEQEWIVSARHFSEFNEAAKHYIADHYDELLTQPKSTLNNALLIKKGYLQKGFSDKNPFGQQYVTGIVRNNQKRPPALQALTCSVNGENLTEKGMRRIAAQINGMGGFVDERNLAIGAYGGWISQPKDFGLDCRFGHIAIALSSEILGSVLQESDRLYRFQVKHKPELNRMHTHIDMGGNNLNNANAVNAKEGVFSKTVTANGDIKSQGGWLVTQDNKGWINTKHGGGFYMTDKEWIRAVNNKSIYTGGQLKGGTVRAEGRLSTGDFLQLEKVVVEGSSCPTSGLVSRDAKGAVLSCQTGRWTKTTGLGPVSYHKTNSGAKNIGSHEFCAIAGFNLPGQYFSNVACHVKPDEHKTGFYRVARRVLCTSNVKQFALIKKFYAS
SIO_010081: LDL57_RS16345
subclass of: SO_0000673
so part of: LDL57_RS16345
location: 31541..32818
location: region:31541-32818:1
so has part: feature:31541-32818:1:exon

WP_225507764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31541-32818:1:exon

LDL57_RS16350
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16350
old locus tag: LDL57_16350
pseudo: true
so part of: sequence
location: complement(32806..33331)
location: region:32806-33331:-1
so has part: feature:32806-33331:-1:exon
subclass of: SO_0000010

position:32806:-1
position: 32806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33331:-1
position: 33331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32806-33331:-1:exon

LDL57_RS16350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16350
old locus tag: LDL57_16350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004929670.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: lipocalin family protein
SIO_010081: LDL57_RS16350
subclass of: SO_0000673
so part of: LDL57_RS16350
location: complement(32806..33331)
location: region:32806-33331:-1
so has part: feature:32806-33331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32806-33331:-1:exon

LDL57_RS16355
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16355
old locus tag: LDL57_16355
so part of: sequence
location: 33409..33693
location: region:33409-33693:1
so has part: feature:33409-33693:1:exon
subclass of: SO_0000010

position:33409:1
position: 33409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33693:1
position: 33693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33409-33693:1:exon

LDL57_RS16355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16355
old locus tag: LDL57_16355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTFLSAAWLLLAASYPLSAQEKIDSDDPCTVVLCMYGKLQGNNQSECNGAVRKFFHLKNLVGMVFVHGKLLLNGEIFLADVQQQIRLLSATS
SIO_010081: LDL57_RS16355
subclass of: SO_0000673
so part of: LDL57_RS16355
location: 33409..33693
location: region:33409-33693:1
so has part: feature:33409-33693:1:exon

WP_225507766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33409-33693:1:exon

LDL57_RS16360
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16360
old locus tag: LDL57_16360
so part of: sequence
location: 33723..34082
location: region:33723-34082:1
so has part: feature:33723-34082:1:exon
subclass of: SO_0000010

position:33723:1
position: 33723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34082:1
position: 34082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33723-34082:1:exon

LDL57_RS16360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16360
old locus tag: LDL57_16360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001505436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGKFSKSDKERFNTRIGREVILWDYLKTDKVIADIGAEITVKDPDLYDRISNYVLLHGEDLQGMFKDEKYLYMSCFIRDVRAFRNEFELEERLKPLFSLGKGDADEFVISFPSKLNPA
SIO_010081: LDL57_RS16360
subclass of: SO_0000673
so part of: LDL57_RS16360
location: 33723..34082
location: region:33723-34082:1
so has part: feature:33723-34082:1:exon

WP_180559738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33723-34082:1:exon

LDL57_RS17870
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS17870
so part of: sequence
location: 34103..34483
location: region:34103-34483:1
so has part: feature:34103-34483:1:exon
subclass of: SO_0000010

position:34103:1
position: 34103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34483:1
position: 34483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34103-34483:1:exon

LDL57_RS17870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS17870
inference: COORDINATES: protein motif:HMM:NF040300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6012 family protein
translation: MLLHLSPRYYLRYSDVQLDLIDVSVPELNLTLKGGVDIVARTPYPNKCYQIACRKKGRKAINGIFIETDKKLTNFTQITRWAVNGEIATHKIHFHILDSDFDAITSEIMMWNAFYDTPFYHEKRNP
SIO_010081: LDL57_RS17870
subclass of: SO_0000673
so part of: LDL57_RS17870
location: 34103..34483
location: region:34103-34483:1
so has part: feature:34103-34483:1:exon

WP_255653930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34103-34483:1:exon

LDL57_RS16370
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16370
old locus tag: LDL57_16370
so part of: sequence
location: 34603..35028
location: region:34603-35028:1
so has part: feature:34603-35028:1:exon
subclass of: SO_0000010

position:34603:1
position: 34603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35028:1
position: 35028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34603-35028:1:exon

LDL57_RS16370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16370
old locus tag: LDL57_16370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKELNSFQYPQLNLNALQYLLRESTIPSPDDAFIANVAPYEYTLKPTSTAISEIEALPVALMKNQLKNKNDNVNHVLNEINQRAPYFFTNTNDLLNKARLFSTTYLTSNENDLRFIDDELTQRFFSLDFIENENQEIQQTK
SIO_010081: LDL57_RS16370
subclass of: SO_0000673
so part of: LDL57_RS16370
location: 34603..35028
location: region:34603-35028:1
so has part: feature:34603-35028:1:exon

WP_225507870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34603-35028:1:exon

LDL57_RS16375
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16375
old locus tag: LDL57_16375
pseudo: true
so part of: sequence
location: 35040..37205
location: region:35040-37205:1
so has part: feature:35040-37205:1:exon
subclass of: SO_0000010

position:35040:1
position: 35040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37205:1
position: 37205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35040-37205:1:exon

LDL57_RS16375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16375
old locus tag: LDL57_16375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020313368.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA topoisomerase 3
SIO_010081: LDL57_RS16375
subclass of: SO_0000673
so part of: LDL57_RS16375
location: 35040..37205
location: region:35040-37205:1
so has part: feature:35040-37205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35040-37205:1:exon

LDL57_RS16380
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16380
old locus tag: LDL57_16380
so part of: sequence
location: 37288..37632
location: region:37288-37632:1
so has part: feature:37288-37632:1:exon
subclass of: SO_0000010

position:37288:1
position: 37288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37632:1
position: 37632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37288-37632:1:exon

LDL57_RS16380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16380
old locus tag: LDL57_16380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001749339.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MSKLKDKVVAFRLSQEDFAHFEEKLLKSQMTKSAFFREVFLQANVNLTVQSLPSKELRHLTFLYNKASNNLNQIAHQVNIAHLTQKVSERLYRQVNNGLIDIRELLLSGVHDVN
SIO_010081: LDL57_RS16380
subclass of: SO_0000673
so part of: LDL57_RS16380
location: 37288..37632
location: region:37288-37632:1
so has part: feature:37288-37632:1:exon

WP_180558369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37288-37632:1:exon

LDL57_RS16385
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16385
old locus tag: LDL57_16385
so part of: sequence
location: 37622..38041
location: region:37622-38041:1
so has part: feature:37622-38041:1:exon
subclass of: SO_0000010

position:37622:1
position: 37622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38041:1
position: 38041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37622-38041:1:exon

LDL57_RS16385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16385
old locus tag: LDL57_16385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: relaxase
translation: MLIRVKGYNDGGKEYLEEGKKNGRDLTREELDDRVILYGDLDLTQMIYRQIPDKGQERYVSFTLSFREEYVANETLLAITQEFKDFLMYAYEEEEYNFYAEAHIPKIKFLPDQKTGKMIERKPHIHILVPRKICYPAGK
SIO_010081: LDL57_RS16385
subclass of: SO_0000673
so part of: LDL57_RS16385
location: 37622..38041
location: region:37622-38041:1
so has part: feature:37622-38041:1:exon

WP_225507768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37622-38041:1:exon

LDL57_RS16390
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16390
old locus tag: LDL57_16390
so part of: sequence
location: 38038..38379
location: region:38038-38379:1
so has part: feature:38038-38379:1:exon
subclass of: SO_0000010

position:38038:1
position: 38038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38379:1
position: 38379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38038-38379:1:exon

LDL57_RS16390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16390
old locus tag: LDL57_16390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNPSGWCDSHVSYFEAFQEYINQKYQLQSPREHVRINPTNAAEVLSRYKGDDFLSKNRDFKKRLVTEIVDKAIHTRHDFYNLVADYGDTRIRNKGKENEYIAVKLPGIPSLPI
SIO_010081: LDL57_RS16390
subclass of: SO_0000673
so part of: LDL57_RS16390
location: 38038..38379
location: region:38038-38379:1
so has part: feature:38038-38379:1:exon

WP_225507770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38038-38379:1:exon

LDL57_RS16395
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16395
old locus tag: LDL57_16395
pseudo: true
so part of: sequence
location: 38615..>38866
location: region:38615-38866:1
so has part: feature:38615-38866:1:exon
subclass of: SO_0000010

position:38615:1
position: 38615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38866:1
position: 38866
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38615-38866:1:exon

LDL57_RS16395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16395
old locus tag: LDL57_16395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007247727.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: LDL57_RS16395
subclass of: SO_0000673
so part of: LDL57_RS16395
location: 38615..>38866
location: region:38615-38866:1
so has part: feature:38615-38866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38615-38866:1:exon

LDL57_RS16400
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16400
old locus tag: LDL57_16400
so part of: sequence
location: 39460..40365
location: region:39460-40365:1
so has part: feature:39460-40365:1:exon
subclass of: SO_0000010

position:39460:1
position: 39460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40365:1
position: 40365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39460-40365:1:exon

LDL57_RS16400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16400
old locus tag: LDL57_16400
inference: COORDINATES: protein motif:HMM:NF037421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAKSRFELFIRHLQAQLERKSADNEKRTISAFDLYTKRAKLSKNVHFLDKKTDLTLFVDTGNAITVRKAAMTDSALMVALTLAKEKFGSTLTIKGSQKFKDQIIEVVAKNNLDIHFTDKGMNQQLAARKAELAIEKTGQRIERPNNTADTEKTTPENQKAASDEPEKATQSDSTDKLNVFEGYLVEHGAAPFKFKPDMSKPEEKRNDSYFVKLQLDDGSVKTLWGVGLEDAVAGLETNEPIRLEDKGVTPVKWTETQADGKSVNKSGERRIWQATPIDRHHENETETPQSDADYDGPEVA
SIO_010081: LDL57_RS16400
subclass of: SO_0000673
so part of: LDL57_RS16400
location: 39460..40365
location: region:39460-40365:1
so has part: feature:39460-40365:1:exon

WP_225507866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39460-40365:1:exon

LDL57_RS16405
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16405
old locus tag: LDL57_16405
so part of: sequence
location: 40694..41065
location: region:40694-41065:1
so has part: feature:40694-41065:1:exon
subclass of: SO_0000010

position:40694:1
position: 40694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41065:1
position: 41065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40694-41065:1:exon

LDL57_RS16405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16405
old locus tag: LDL57_16405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMTKDELVEKVKPFAVEMVNTLASKQHVFNKYLSTIIDCKNEGVPNKLIVDAINLHLNQNTKITLQYFKNLLFRSGYKKHPKSPLIKDEISNKNPKRFGNFQIPEEKTFKHNPQSDNELFTKE
SIO_010081: LDL57_RS16405
subclass of: SO_0000673
so part of: LDL57_RS16405
location: 40694..41065
location: region:40694-41065:1
so has part: feature:40694-41065:1:exon

WP_180558371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40694-41065:1:exon

LDL57_RS16410
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16410
old locus tag: LDL57_16410
so part of: sequence
location: 41068..41844
location: region:41068-41844:1
so has part: feature:41068-41844:1:exon
subclass of: SO_0000010

position:41068:1
position: 41068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41844:1
position: 41844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41068-41844:1:exon

LDL57_RS16410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16410
old locus tag: LDL57_16410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019923820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraL
translation: MNTKAEKMTNEKTDTLDNHSIHFVLQGKGGIGKSLISSSLSQYFKSKFGAVKPFDTDQENTTLLHYKSLEVEHIPLMNQSRVIDAKNFDVLMEKLIGSDECCVIDNGANTFSPLLAYLIENDGFEILRESGKKVYIHTVIGGGDTLVDTATGFNSIAEGVTNTPIILWLNEHFGALSLPTGEKLEELKVYKKNENRLAGIIVLHHRNHQTFGDDIKRMNANRLTLTEVLQSPTFSLMEKQRLKTVFNAIFHQLDTINW
SIO_010081: LDL57_RS16410
subclass of: SO_0000673
so part of: LDL57_RS16410
location: 41068..41844
location: region:41068-41844:1
so has part: feature:41068-41844:1:exon

WP_225507772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41068-41844:1:exon

LDL57_RS16415
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16415
old locus tag: LDL57_16415
so part of: sequence
location: 41877..42395
location: region:41877-42395:1
so has part: feature:41877-42395:1:exon
subclass of: SO_0000010

position:41877:1
position: 41877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42395:1
position: 42395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41877-42395:1:exon

LDL57_RS16415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16415
old locus tag: LDL57_16415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDEQRQKIAIKIYESTGVMYDKNDPVFALALINAEINKMLISDLEDKHQCLINAIEELPTKIEASLEKLIAGLEEAEKSYTEIDVKHRNILNNQLDETKLEIRCAIKNEITGGISEAISHAKKQLNQLENQVEDVSTNCSFVNDKSWIAIIIISTALIISICFNAIAYIFR
SIO_010081: LDL57_RS16415
subclass of: SO_0000673
so part of: LDL57_RS16415
location: 41877..42395
location: region:41877-42395:1
so has part: feature:41877-42395:1:exon

WP_225507774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41877-42395:1:exon

LDL57_RS16420
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16420
old locus tag: LDL57_16420
so part of: sequence
location: 42583..42981
location: region:42583-42981:1
so has part: feature:42583-42981:1:exon
subclass of: SO_0000010

position:42583:1
position: 42583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42981:1
position: 42981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42583-42981:1:exon

LDL57_RS16420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16420
old locus tag: LDL57_16420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010617321.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MDGDTVFVLTEGKRVKVRLIGIDAPELGQPFGRRSKQNLLHLSAKKQAEVMTEKQDRFGRWLGTLIIAGKNINTEQVRSGLAWAYRYHGKATNFRFLALEKKARQANIGLWSSKSPIEPWMWRKQKSDKKSD
SIO_010081: LDL57_RS16420
subclass of: SO_0000673
so part of: LDL57_RS16420
location: 42583..42981
location: region:42583-42981:1
so has part: feature:42583-42981:1:exon

WP_225507868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42583-42981:1:exon

LDL57_RS16425
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
gene: umuC
locus tag: LDL57_RS16425
old locus tag: LDL57_16425
so part of: sequence
location: complement(43004..44275)
location: region:43004-44275:-1
so has part: feature:43004-44275:-1:exon
subclass of: SO_0000010

position:43004:-1
position: 43004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44275:-1
position: 44275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43004-44275:-1:exon

LDL57_RS16425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
gene: umuC
locus tag: LDL57_RS16425
old locus tag: LDL57_16425
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004239652.1
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V subunit UmuC
translation: MFALVDVNSFYASCEQVFRPELKGKPVVVLSNNDGCVIARSRNARKHIRMGAPWFEIESFVKENNVAVFSSNYTYYADMSMRVMEVLAFLVPKLEIYSIDEAFCDLSGVSSTYDLTEFGFYLQKEIMKRCHLPVGVGISTTKTLAKLANFAAKQWQKTGGVVDLSLKDRQQKLMSLVPVAEVWGIGRKLSKKLQLLNINTALDLSRLPPDEARKFHSVVLERTVRELNGISCLTLEEQQNPKKQIICSRSFGNKITNFDFVRQSVCARAERAAEKLREEKQFCKLINVSIQSSRFSKKTGGFYRYGSQKLTYPTQDSRDIIKAATNILDNIWVADIEYSKSGVMLSDFYDSGVKQLSLFETEKPYKNSDILMQLIDEINRSSLAQIGFAGKGNAEKKYPWQMKRQYLSQKWTTDINQTAIVKC
SIO_010081: LDL57_RS16425
subclass of: SO_0000673
so part of: LDL57_RS16425
location: complement(43004..44275)
location: region:43004-44275:-1
so has part: feature:43004-44275:-1:exon

WP_225507776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43004-44275:-1:exon

LDL57_RS16430
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16430
old locus tag: LDL57_16430
so part of: sequence
location: 44496..45335
location: region:44496-45335:1
so has part: feature:44496-45335:1:exon
subclass of: SO_0000010

position:44496:1
position: 44496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45335:1
position: 45335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44496-45335:1:exon

LDL57_RS16430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16430
old locus tag: LDL57_16430
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MEISKNQSTKLEGDEEKKLKTINSRIPNLPGVYFFFGENEFLPIYIGKSINLKKRVLSHFYTRNIRLINQLKYIHWQTTAGEIGALLLEARLIKQYHPIFNKRLRKHRELCAFQVTNKKINIVYAKEIDFSKAENLYGLYKNRFTALEKLKSIADENHLCYCKLGLEKTRASGCFRLQLGLCHGVCINKESQEHHHSRVLRAFKQHKLAVWPYKGAIGITEKGVQQTQIHIVNNWVYLGSVENLNETLTFNHAMDKFDRDMYKILCRYLSKKNITIIPL
SIO_010081: LDL57_RS16430
subclass of: SO_0000673
so part of: LDL57_RS16430
location: 44496..45335
location: region:44496-45335:1
so has part: feature:44496-45335:1:exon

WP_180559731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44496-45335:1:exon

LDL57_RS16435
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16435
old locus tag: LDL57_16435
so part of: sequence
location: complement(45343..45522)
location: region:45343-45522:-1
so has part: feature:45343-45522:-1:exon
subclass of: SO_0000010

position:45343:-1
position: 45343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45522:-1
position: 45522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45343-45522:-1:exon

LDL57_RS16435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16435
old locus tag: LDL57_16435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000165970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rop family plasmid primer RNA-binding protein
translation: MTKQELSTLNMAGFIKSQTLILLDKLNQLNLDDCADECEELHEMAEVLYLKLRQRLDKK
SIO_010081: LDL57_RS16435
subclass of: SO_0000673
so part of: LDL57_RS16435
location: complement(45343..45522)
location: region:45343-45522:-1
so has part: feature:45343-45522:-1:exon

WP_180559732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45343-45522:-1:exon

LDL57_RS16440
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16440
old locus tag: LDL57_16440
so part of: sequence
location: complement(45561..45791)
location: region:45561-45791:-1
so has part: feature:45561-45791:-1:exon
subclass of: SO_0000010

position:45561:-1
position: 45561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45791:-1
position: 45791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45561-45791:-1:exon

LDL57_RS16440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16440
old locus tag: LDL57_16440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005759576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRLVWRWENDARWYEAELCYDLFGDLLLIQRWGGLGNHLHGQKTEIVPDMLSGIAKLHAIDRQRRKRKKPYHRIE
SIO_010081: LDL57_RS16440
subclass of: SO_0000673
so part of: LDL57_RS16440
location: complement(45561..45791)
location: region:45561-45791:-1
so has part: feature:45561-45791:-1:exon

WP_180559733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45561-45791:-1:exon

LDL57_RS16445
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16445
old locus tag: LDL57_16445
so part of: sequence
location: complement(45784..46350)
location: region:45784-46350:-1
so has part: feature:45784-46350:-1:exon
subclass of: SO_0000010

position:45784:-1
position: 45784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46350:-1
position: 46350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45784-46350:-1:exon

LDL57_RS16445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16445
old locus tag: LDL57_16445
inference: COORDINATES: protein motif:HMM:NF016255.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ProQ/FINO family protein
translation: MTERQKLSLNRPRRVSEETTPKSSPVYRKKVWVNSAPKKQVKKPKPQKPVKPVTQKRVEKSQPVVKIKIPKPPQQPKKRLPLAEAISQISLFWPALFPEHQLRPMKIGIQQDMWQEVKEKCLPITRRRLRACLGSIGHHANYRALIHLSASRYDKDGQVAGEVTQADVEDNLQRLVRLNKSFQQPVDG
SIO_010081: LDL57_RS16445
subclass of: SO_0000673
so part of: LDL57_RS16445
location: complement(45784..46350)
location: region:45784-46350:-1
so has part: feature:45784-46350:-1:exon

WP_225507778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45784-46350:-1:exon

LDL57_RS16450
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16450
old locus tag: LDL57_16450
so part of: sequence
location: complement(46352..47317)
location: region:46352-47317:-1
so has part: feature:46352-47317:-1:exon
subclass of: SO_0000010

position:46352:-1
position: 46352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47317:-1
position: 47317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46352-47317:-1:exon

LDL57_RS16450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16450
old locus tag: LDL57_16450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873870.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MSKKFTPTPHDSLFKQFLSEKETAKDFFTIWLPDEIKSLCDLNSLKLESGSFIDSEMKNYQSDILYSVKTEKGKGYFYLLIEQQSTPDKLMAWRLMRYSMAAMQKHLEAGHKKLPLVFPILFYTGEKSPYPYSTDWFDCFSGRDIAEKIYTKPFKLVDVTTLNDGEIMQHKRLALLELIQKHIRRRDMTELLSEIVQLLSYNYYSDNQVITLFNYLIQEGNAEQPAKLIKEIAKQSEKHEEALMNIAQGLRQEGIQEGIQKGKLEGMQEGIQKGIQKGKLEGEKQASLKIARQMLESGMDRQSVMKFTSLTDSELKNLFKD
SIO_010081: LDL57_RS16450
subclass of: SO_0000673
so part of: LDL57_RS16450
location: complement(46352..47317)
location: region:46352-47317:-1
so has part: feature:46352-47317:-1:exon

WP_225507779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46352-47317:-1:exon

LDL57_RS16455
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16455
old locus tag: LDL57_16455
so part of: sequence
location: complement(47649..47969)
location: region:47649-47969:-1
so has part: feature:47649-47969:-1:exon
subclass of: SO_0000010

position:47649:-1
position: 47649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47969:-1
position: 47969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47649-47969:-1:exon

LDL57_RS16455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16455
old locus tag: LDL57_16455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKTNNALGVKSFLVFDINNQSSSKFFNTYDEAADYCIDNGISTFLEVGDFEYKKSEKISIKPKNFYFVPKNSDSIYVVDVNDFEEICESMTTGKIFINTNSNTIN
SIO_010081: LDL57_RS16455
subclass of: SO_0000673
so part of: LDL57_RS16455
location: complement(47649..47969)
location: region:47649-47969:-1
so has part: feature:47649-47969:-1:exon

WP_225507782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47649-47969:-1:exon

LDL57_RS16460
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16460
old locus tag: LDL57_16460
so part of: sequence
location: complement(47966..48238)
location: region:47966-48238:-1
so has part: feature:47966-48238:-1:exon
subclass of: SO_0000010

position:47966:-1
position: 47966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48238:-1
position: 48238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47966-48238:-1:exon

LDL57_RS16460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16460
old locus tag: LDL57_16460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010865085.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKTELINKVSEKSGLAKKDAEKVVNAFAETITESLKSGNSVQLVGFGSFQVKQRAERKGHNPQTGKAIKIAGTNIPSFKAGQKLKDAVK
SIO_010081: LDL57_RS16460
subclass of: SO_0000673
so part of: LDL57_RS16460
location: complement(47966..48238)
location: region:47966-48238:-1
so has part: feature:47966-48238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47966-48238:-1:exon

LDL57_RS16465
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16465
old locus tag: LDL57_16465
so part of: sequence
location: 48935..49867
location: region:48935-49867:1
so has part: feature:48935-49867:1:exon
subclass of: SO_0000010

position:48935:1
position: 48935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49867:1
position: 49867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48935-49867:1:exon

LDL57_RS16465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16465
old locus tag: LDL57_16465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTDLTTKTRKHNLKTLRPHKHKQLEFFIADDIDITSFRDEMASMEHPFFALKGGDTKVRIYKNGNTIVTIRPAAEIGLATVFDKDIWIYATSKLQEAINNNQPISRTITFTPYDFFITTNRDKGGRSYLELEKALSRLKGTTIKTNIIYSEDKQETIEFGLIDSWRIIEEKKGKLEIGMVEITLPDWLYQAITKTKVLQISPDYFRIRKAIDRRIYEIARKHCGNQHEFIISLEKLHLKTGSVSSIRLFKQKLKTLFTNNDLPDYEVLFDPSSDKVTFKNRNQNCPKVEASRKREKGKKEIFKIKNHLIK
SIO_010081: LDL57_RS16465
subclass of: SO_0000673
so part of: LDL57_RS16465
location: 48935..49867
location: region:48935-49867:1
so has part: feature:48935-49867:1:exon

WP_225507786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48935-49867:1:exon

LDL57_RS16470
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16470
old locus tag: LDL57_16470
so part of: sequence
location: 50024..50656
location: region:50024-50656:1
so has part: feature:50024-50656:1:exon
subclass of: SO_0000010

position:50024:1
position: 50024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50656:1
position: 50656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50024-50656:1:exon

LDL57_RS16470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16470
old locus tag: LDL57_16470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006590421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIISVLNQKGGVGKTTLSVNIASRIAATGERVLLLDADPQGSALDWSAAREEKLLFSVLGLPRATIHKDVSKFIDDYNHIVIDGPPRVTDLARSAIMASDFVLIPVQPSPYDVWASQEVITLIEEAKIYKEKLKSAFVINRKIVNTAIGRDVNDALAIYDTKVFNSTISQRVIFAEAAAIGKAVFELDINCAASKEIYDLVDEIMKQRII
SIO_010081: LDL57_RS16470
subclass of: SO_0000673
so part of: LDL57_RS16470
location: 50024..50656
location: region:50024-50656:1
so has part: feature:50024-50656:1:exon

WP_225507788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50024-50656:1:exon

LDL57_RS16475
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16475
old locus tag: LDL57_16475
so part of: sequence
location: 50653..50892
location: region:50653-50892:1
so has part: feature:50653-50892:1:exon
subclass of: SO_0000010

position:50653:1
position: 50653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50892:1
position: 50892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50653-50892:1:exon

LDL57_RS16475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16475
old locus tag: LDL57_16475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MTGKKITFGSRPNKPNSDVDAWVESRFHNEYQKDKEKMKRLTIDVPESLHKLIKSACAMRGTKIADEVRELLYQKYGDL
SIO_010081: LDL57_RS16475
subclass of: SO_0000673
so part of: LDL57_RS16475
location: 50653..50892
location: region:50653-50892:1
so has part: feature:50653-50892:1:exon

WP_225507789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50653-50892:1:exon

LDL57_RS16480
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16480
old locus tag: LDL57_16480
so part of: sequence
location: 50904..51347
location: region:50904-51347:1
so has part: feature:50904-51347:1:exon
subclass of: SO_0000010

position:50904:1
position: 50904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51347:1
position: 51347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50904-51347:1:exon

LDL57_RS16480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16480
old locus tag: LDL57_16480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019456441.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MQMLIEYYKLQKKHLPYFYEIRFSVEENLVHPHQIKYLQRNQAVADIEQGGGWICKVNDVYAGFCFGIFIEKPIIGGLFVKPEYQSKGIGTELLNRVTNWMFEQGTDEIKLTTDPGSKAEFFYRRRGWEYIGLDEFGIQIEFKKKKT
SIO_010081: LDL57_RS16480
subclass of: SO_0000673
so part of: LDL57_RS16480
location: 50904..51347
location: region:50904-51347:1
so has part: feature:50904-51347:1:exon

WP_225507791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50904-51347:1:exon

LDL57_RS16485
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16485
old locus tag: LDL57_16485
so part of: sequence
location: 51322..51801
location: region:51322-51801:1
so has part: feature:51322-51801:1:exon
subclass of: SO_0000010

position:51322:1
position: 51322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51801:1
position: 51801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51322-51801:1:exon

LDL57_RS16485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16485
old locus tag: LDL57_16485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004929895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MNLKKRKLSKIYNLLMVLVFISISANSEIDYLYLKKDGETIKITRHDLEKLPSHSIVTSTNFTKKNEFLGVKFKEILNKYKITATTVRAFAYDNYSFTLPVKELLDYEVILAYKKNGDYMELSELGPFVIIYPRDSYPDLDLLSVNAKTVWQIKLLEFK
SIO_010081: LDL57_RS16485
subclass of: SO_0000673
so part of: LDL57_RS16485
location: 51322..51801
location: region:51322-51801:1
so has part: feature:51322-51801:1:exon

WP_225507793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51322-51801:1:exon

LDL57_RS16490
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16490
old locus tag: LDL57_16490
so part of: sequence
location: 51954..53072
location: region:51954-53072:1
so has part: feature:51954-53072:1:exon
subclass of: SO_0000010

position:51954:1
position: 51954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53072:1
position: 53072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51954-53072:1:exon

LDL57_RS16490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16490
old locus tag: LDL57_16490
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MLSFEKMKTHLLISSVHEDDEFINNKEVFKSKIKILKNKSELNDNFFYNKKIIYITNDLLIKLNSFDYLYKKYKQYIVSKKELISLIEIIELDLVNLQEVIYEVQISKFNDIKSSVIKNSDISSKFAVVSFILLILIIFNMFSLQQTLKKKNIFISSIYHELSSSIQKIIIATDIIQYQLAKNQLRDELSVISKHAKKIMEQTKEILEYSKLEIGRIKIVKSLFSLDKVVEDILNDITVINDNEIKIFNSCEDINILSDRSKIYRILINLIENANKFTVNGTIIIHVKIIKNNLLIKVKDNGLGFDKKKIKYLFKAFNQGAEKNTRQGLGLGLTIVDNYIKILQGKIYIKSIPNIGSSFLIIVPIEVSEKQT
SIO_010081: LDL57_RS16490
subclass of: SO_0000673
so part of: LDL57_RS16490
location: 51954..53072
location: region:51954-53072:1
so has part: feature:51954-53072:1:exon

WP_225507795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51954-53072:1:exon

LDL57_RS16495
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16495
old locus tag: LDL57_16495
so part of: sequence
location: complement(53055..53837)
location: region:53055-53837:-1
so has part: feature:53055-53837:-1:exon
subclass of: SO_0000010

position:53055:-1
position: 53055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53837:-1
position: 53837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53055-53837:-1:exon

LDL57_RS16495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16495
old locus tag: LDL57_16495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015376320.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKKNLNYLDKIEALLNKKGITQRKHASTIANILGIQYKSAKQKLDKKRGIKLSEIITIFKYFNEPFKIKRNHNCVYIVNDVHKICNINVCNKIVTHFEDGCMHAIKKDDIFIIYEDKTKMLEAGNQIYQIKNIEFLPAPKIAILDNDIDLLNLLKKITKRYGIEADTYQTKEELSKKMNKENYQAFIIDWLLDFNETSEDLIKKIDISEEESKKIIILTGQLENYEKNIGDIILNYDITLIEKPAKPLIISSILLSSLFF
SIO_010081: LDL57_RS16495
subclass of: SO_0000673
so part of: LDL57_RS16495
location: complement(53055..53837)
location: region:53055-53837:-1
so has part: feature:53055-53837:-1:exon

WP_225507797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53055-53837:-1:exon

LDL57_RS16500
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16500
old locus tag: LDL57_16500
so part of: sequence
location: 54007..54333
location: region:54007-54333:1
so has part: feature:54007-54333:1:exon
subclass of: SO_0000010

position:54007:1
position: 54007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54333:1
position: 54333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54007-54333:1:exon

LDL57_RS16500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16500
old locus tag: LDL57_16500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGKATSYLKNTPILRGEVKAKRNIAVILSNFFVRFVTRALFSFPVVFFWLTVGFVLSGYFNDTFPFVPDVNEFSMENLFEALKPVFRYAFSVTAIVCLLRESTALFK
SIO_010081: LDL57_RS16500
subclass of: SO_0000673
so part of: LDL57_RS16500
location: 54007..54333
location: region:54007-54333:1
so has part: feature:54007-54333:1:exon

WP_225507799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54007-54333:1:exon

LDL57_RS16505
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16505
old locus tag: LDL57_16505
so part of: sequence
location: 54569..54862
location: region:54569-54862:1
so has part: feature:54569-54862:1:exon
subclass of: SO_0000010

position:54569:1
position: 54569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54862:1
position: 54862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54569-54862:1:exon

LDL57_RS16505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16505
old locus tag: LDL57_16505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNARQRCRYRRQMRYREKCRIADEIRLLRLNLINSQKPRTTSAILDEIWGLEKEAKEQHQNIEALVEVILALKNKFFNTESKSSIDNRCLPRTYLLR
SIO_010081: LDL57_RS16505
subclass of: SO_0000673
so part of: LDL57_RS16505
location: 54569..54862
location: region:54569-54862:1
so has part: feature:54569-54862:1:exon

WP_225507801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54569-54862:1:exon

LDL57_RS16510
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16510
old locus tag: LDL57_16510
so part of: sequence
location: 54887..55114
location: region:54887-55114:1
so has part: feature:54887-55114:1:exon
subclass of: SO_0000010

position:54887:1
position: 54887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55114:1
position: 55114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54887-55114:1:exon

LDL57_RS16510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16510
old locus tag: LDL57_16510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708968.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKQLSRKGRRLYVGAVLRDQLDKIVVDIGHYVGRPILVTEFVQYVIERHAEEAKKKLKVILGTEEERTTSSKKR
SIO_010081: LDL57_RS16510
subclass of: SO_0000673
so part of: LDL57_RS16510
location: 54887..55114
location: region:54887-55114:1
so has part: feature:54887-55114:1:exon

WP_225507803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54887-55114:1:exon

LDL57_RS16515
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16515
old locus tag: LDL57_16515
so part of: sequence
location: 55118..55738
location: region:55118-55738:1
so has part: feature:55118-55738:1:exon
subclass of: SO_0000010

position:55118:1
position: 55118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55738:1
position: 55738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55118-55738:1:exon

LDL57_RS16515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16515
old locus tag: LDL57_16515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001562939.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MLTPTAFLALAMQCAPSVHPETAFDVARVESNFNPYAIAEIIPKAERSATNTRVISHFPANKTEALARIKQIEAKKHRYSVGLMQITSTNFARFGMTAEKLLSPCHNLTVFEKILTDCYRRGGSLKRALSCYYAGDFTTGQQPEAQFAKTSYVERIGYVVPSTRQERTRKEDAPNLKRENFAIWDVLRDFPEAITVTQSDIESKEL
SIO_010081: LDL57_RS16515
subclass of: SO_0000673
so part of: LDL57_RS16515
location: 55118..55738
location: region:55118-55738:1
so has part: feature:55118-55738:1:exon

WP_225507805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55118-55738:1:exon

LDL57_RS16520
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16520
old locus tag: LDL57_16520
so part of: sequence
location: 55739..56062
location: region:55739-56062:1
so has part: feature:55739-56062:1:exon
subclass of: SO_0000010

position:55739:1
position: 55739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56062:1
position: 56062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55739-56062:1:exon

LDL57_RS16520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16520
old locus tag: LDL57_16520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001562938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKNVNVFPFFLVILYLFIPAVANAVWYDPLVKFAQEFRTAVIILGGVAAVSSMVYVGVCWMISRMAGTMDTTMMDYVKHVGVIGCVGGAVALAGWAYSLWGGAIS
SIO_010081: LDL57_RS16520
subclass of: SO_0000673
so part of: LDL57_RS16520
location: 55739..56062
location: region:55739-56062:1
so has part: feature:55739-56062:1:exon

WP_180558330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55739-56062:1:exon

LDL57_RS16525
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16525
old locus tag: LDL57_16525
so part of: sequence
location: 56062..56433
location: region:56062-56433:1
so has part: feature:56062-56433:1:exon
subclass of: SO_0000010

position:56433:1
position: 56433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56062-56433:1:exon

LDL57_RS16525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16525
old locus tag: LDL57_16525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000504825.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MHTQANLSFDSHNAMARVAMFCGIPLFPLIFLVIGAAVGLFSGVYFFGWWGLGFSFPFLGGIFGMRMLCSRDDKAIRRYFFHRKRQWLNKAYGRHLVITPRTLQWREKYVRRLVKKNLLAGAS
SIO_010081: LDL57_RS16525
subclass of: SO_0000673
so part of: LDL57_RS16525
location: 56062..56433
location: region:56062-56433:1
so has part: feature:56062-56433:1:exon

WP_225507807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56062-56433:1:exon

LDL57_RS16530
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16530
old locus tag: LDL57_16530
so part of: sequence
location: 56387..58891
location: region:56387-58891:1
so has part: feature:56387-58891:1:exon
subclass of: SO_0000010

position:56387:1
position: 56387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58891:1
position: 58891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56387-58891:1:exon

LDL57_RS16530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16530
old locus tag: LDL57_16530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001562935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein
translation: MSEDLLKKTFSPERLKAPFLGHHVHPSICTLGQSHLLSLVRFDGVSHETRDPTLLNQEFLLLNRCLQALGRQEGNQLLVKTYCYKTRICHDTAYHLELPILQDFVDKYVEPFKKGEFRQVGYAMVLMLKYQDLEEGIARMGDLLSICKEMLATFGIKIMGMEENDGKLYSQIGQFFSFILNGTAHPVPITDSRLGDLIIDSETAFGAYDYVENRPYRGKTRFASTFDLRDYPEATTPGMWDEALEEQSDFILTQSFHFEDRNQIKRKLKVQTSDLSATEGQSEQTDALQDAVQAVTQGRVVFGQYHASLIVFGQTADDAVNNGAKMQSIMMAKNTGFVRSTSTNIFTWLTLFPGYNDVIYAMPKSTENLSCGFSLHATPIGKEKGNPPGDGTALMPIKTNKGGIYFLNAHDSPPWENSTGKSLPGHIVNHAMTGAGKSSSAAIKLIFFSRWNPMIFAIDYNHSMENVHRALGGKYFAIKPGEFTGINPFQLTDTVNLRQYLFDTVKQCAGGATPEEEHVIQLAIDAVMKHAQVENRSFSLLLQFINETGGNGLRARLAKWCRNAGGKKGHYAWVLDSPKNTFDPTCFRRLAFDCSGLLKKEYVERHPEVVEVMLNTFFYLKERMHATAPGSLLINQISEYWVSLAFKSTAAKIEEILLAGRMRGEILMMDTQTLEHALKTEMAATIVQQVITQEWMANTKANRESYAKFGVTGREFEKITELNEYSRKVMIKQGSATVIGSLMLGAELEYWLPLLSATERNLQIAEQVRQKLQTEDPAVWVSAFLDEMVAVDVRQKLQTDDRDIWYPEFLHVLKKLGRKETDTLFTGEPIWGVN
SIO_010081: LDL57_RS16530
subclass of: SO_0000673
so part of: LDL57_RS16530
location: 56387..58891
location: region:56387-58891:1
so has part: feature:56387-58891:1:exon

WP_225507809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56387-58891:1:exon

LDL57_RS16535
type: Gene
subclass of: SO_0000704
RO_0002162: 2879119
locus tag: LDL57_RS16535
old locus tag: LDL57_16535
so part of: sequence
location: 58876..59550
location: region:58876-59550:1
so has part: feature:58876-59550:1:exon
subclass of: SO_0000010

position:58876:1
position: 58876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59550:1
position: 59550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58876-59550:1:exon

LDL57_RS16535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2879119
locus tag: LDL57_RS16535
old locus tag: LDL57_16535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001086129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein
translation: MGSKLTLRLALIITCLSSPAFSGGIPTVSVAELTQMVKNAQQQARESLAQLEKAKESILQAKNQYEHYKSIMQGNNKLGDFLNDPKIKQLLPMGDWMDIYQRAQDLPSLRNRYGLTSQDPKVQAVFDKLLSQAGTLEAQYKATNKRIETAEGLRRQLNRVETPKDREQLALRYQQEMLEMQAQQMQLQNARYLVEQKEKMEKERINQEILNFFMGKTDKFPQTD
SIO_010081: LDL57_RS16535
subclass of: SO_0000673
so part of: LDL57_RS16535
location: 58876..59550
location: region:58876-59550:1
so has part: feature:58876-59550:1:exon

WP_225507810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58876-59550:1:exon