Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Azospirillum.
Complete genome of Azosprillum oryzae KACC14407
Submitted (08-JUN-2020) College of Agriculture and Life Sciences, Kyungpook National University, Daehak-ro, Daegu 41566, South Korea
REFSEQ INFORMATION: The reference sequence is identical to\nCP054616.1.\nBacteria and source DNA available from Shin's Lab.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 08-JUN-2020\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 149.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/06/2023 05:27:22\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,126\nCDSs (total) :: 6,022\nGenes (coding) :: 5,944\nCDSs (with protein) :: 5,944\nGenes (RNA) :: 104\nrRNAs :: 7, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 8, 8 (5S, 16S, 23S)\ntRNAs :: 77\nncRNAs :: 4\nPseudo Genes (total) :: 78\nCDSs (without protein) :: 78\nPseudo Genes (ambiguous residues) :: 0 of 78\nPseudo Genes (frameshifted) :: 18 of 78\nPseudo Genes (incomplete) :: 62 of 78\nPseudo Genes (internal stop) :: 10 of 78\nPseudo Genes (multiple problems) :: 12 of 78\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_014249623.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
acyl-CoA dehydrogenase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977172.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249625.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249626.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
MerR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014249627.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_015352390.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249628.1
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
GO:0010951 - negative regulation of endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977168.1
COORDINATES: similar to AA sequence:RefSeq:WP_014416289.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197425.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249631.1
COORDINATES: similar to AA sequence:RefSeq:WP_014494539.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003510098.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977166.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977164.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249634.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249635.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249636.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249637.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249638.1
GO:0005215 - transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007112257.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002944545.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977153.1
GO:0003867 - 4-aminobutyrate transaminase activity [Evidence IEA]
GO:0009450 - gamma-aminobutyric acid catabolic process [Evidence IEA]
4-aminobutyrate--2-oxoglutarate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_012977152.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014249644.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249645.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249646.1
COORDINATES: similar to AA sequence:RefSeq:WP_018454164.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977146.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977145.1
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977144.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249651.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249652.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249653.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249655.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249656.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249657.1
COORDINATES: similar to AA sequence:RefSeq:WP_009542809.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249670.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249671.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977136.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249709.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249708.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249707.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249706.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249705.1
GO:0050129 - N-formylglutamate deformylase activity [Evidence IEA]
GO:0019557 - histidine catabolic process to glutamate and formate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977130.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249703.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977127.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249700.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249699.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249698.1
COORDINATES: similar to AA sequence:RefSeq:WP_018717562.1
COORDINATES: similar to AA sequence:RefSeq:WP_009665532.1
COORDINATES: similar to AA sequence:RefSeq:WP_006461845.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_007876050.1
COORDINATES: similar to AA sequence:RefSeq:WP_011442496.1
COORDINATES: similar to AA sequence:RefSeq:WP_009665528.1
COORDINATES: similar to AA sequence:RefSeq:WP_010930607.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013165023.1
COORDINATES: similar to AA sequence:RefSeq:WP_020094485.1
biotin-dependent carboxyltransferase family protein
COORDINATES: protein motif:HMM:NF012245.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249697.1
GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249696.1
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011088545.1
COORDINATES: similar to AA sequence:RefSeq:WP_019016393.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249694.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977631.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977630.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter permease LptF
COORDINATES: similar to AA sequence:RefSeq:WP_014249691.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249690.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977627.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240889.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240890.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977624.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977623.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249688.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016657 - oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240707.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977620.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249685.1
GO:0016759 - cellulose synthase activity [Evidence IEA]; GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
GO:0030244 - cellulose biosynthetic process [Evidence IEA]; GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
UDP-forming cellulose synthase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012977618.1
GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB
COORDINATES: similar to AA sequence:RefSeq:WP_012977617.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249681.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977615.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977614.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249678.1
indolepyruvate ferredoxin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249729.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007869940.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249727.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011654356.1
GO:0016787 - hydrolase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014249725.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977607.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249720.1
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249719.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249716.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249715.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249714.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249713.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]; GO:0008153 - para-aminobenzoic acid biosynthetic process [Evidence IEA]
aminodeoxychorismate synthase component I
COORDINATES: similar to AA sequence:RefSeq:WP_012977600.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977599.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249731.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249732.1
YMGG-like glycine zipper-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249733.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249734.1
GO:0033104 - type VI protein secretion system complex [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system protein TssL, long form
COORDINATES: similar to AA sequence:RefSeq:WP_014249735.1
type VI secretion system membrane subunit TssM
COORDINATES: similar to AA sequence:RefSeq:WP_014249736.1
type VI secretion system-associated protein TagF
COORDINATES: similar to AA sequence:RefSeq:WP_014249737.1
type VI secretion system tip protein TssI/VgrG
COORDINATES: similar to AA sequence:RefSeq:WP_014249738.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249740.1
type VI secretion system-associated FHA domain protein TagH
COORDINATES: similar to AA sequence:RefSeq:WP_014249741.1
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249742.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977598.1
COORDINATES: similar to AA sequence:RefSeq:WP_011382671.1
COORDINATES: similar to AA sequence:RefSeq:WP_003607417.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249746.1
GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977594.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977593.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006338792.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249764.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249763.1
GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
oxygen-dependent coproporphyrinogen oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_012977591.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014249761.1
GO:0045275 - respiratory chain complex III [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012977589.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977588.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249758.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977585.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249756.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249755.1
short-chain fatty acyl-CoA regulator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007091463.1
GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249753.1
acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012977581.1
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977580.1
DUF2161 family putative PD-(D/E)XK-type phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_012977578.1
COORDINATES: similar to AA sequence:RefSeq:WP_013849285.1
COORDINATES: similar to AA sequence:RefSeq:WP_007760906.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249767.1
GO:0070069 - cytochrome complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249768.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_014249769.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249770.1
GO:0004854 - xanthine dehydrogenase activity [Evidence IEA]
GO:0009115 - xanthine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249771.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0004854 - xanthine dehydrogenase activity [Evidence IEA]
xanthine dehydrogenase molybdopterin binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014249772.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]; GO:0009115 - xanthine catabolic process [Evidence IEA]
xanthine dehydrogenase accessory protein XdhC
COORDINATES: similar to AA sequence:RefSeq:WP_014249773.1
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0042777 - proton motive force-driven plasma membrane ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249774.1
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249775.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405656.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249777.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249778.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977200.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249780.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493236.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249782.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249783.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249784.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249785.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249786.1
COORDINATES: similar to AA sequence:RefSeq:WP_007596702.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249789.1
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_014249485.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249486.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249487.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012977212.1
GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249489.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249490.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249491.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977215.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977216.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977217.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249481.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_012977219.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977220.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249477.1
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249476.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977223.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249474.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012977225.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014718480.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188584.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389417.1
GO:0102662 - malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity [Evidence IEA]
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_017423693.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188500.1
COORDINATES: similar to AA sequence:RefSeq:WP_015343676.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649364.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018445089.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977454.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977453.1
COORDINATES: similar to AA sequence:RefSeq:WP_017269930.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977451.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977450.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188575.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188574.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010967977.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011649380.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977445.1
COORDINATES: similar to AA sequence:RefSeq:WP_010973009.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011649388.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018445074.1
COORDINATES: similar to AA sequence:RefSeq:WP_010967971.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188566.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188565.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977438.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188563.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188562.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006206821.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188560.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977433.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009734117.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011581589.1
GO:0015103 - inorganic anion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017021.2
COORDINATES: similar to AA sequence:RefSeq:WP_014249466.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249465.1
protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
COORDINATES: similar to AA sequence:RefSeq:WP_012977270.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
COORDINATES: similar to AA sequence:RefSeq:WP_012977271.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977272.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249460.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249459.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249458.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249457.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249456.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
formate-dependent phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014249454.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249453.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249452.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249451.1
COORDINATES: similar to AA sequence:RefSeq:WP_011974703.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249449.1
energy-coupling factor transporter transmembrane protein EcfT
COORDINATES: similar to AA sequence:RefSeq:WP_014249448.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010668421.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_014249446.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249445.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976423.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249443.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976421.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249441.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976419.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976418.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249438.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249437.1
COORDINATES: similar to AA sequence:RefSeq:WP_015438035.1
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase complex E1 component subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014249827.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014249828.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976413.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976412.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249831.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976410.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249833.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976408.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249835.1
GO:0018149 - peptide cross-linking [Evidence IEA]; GO:0018189 - pyrroloquinoline quinone biosynthetic process [Evidence IEA]
pyrroloquinoline quinone biosynthesis protein PqqE
COORDINATES: similar to AA sequence:RefSeq:WP_014249836.1
GO:0048038 - quinone binding [Evidence IEA]
GO:0018189 - pyrroloquinoline quinone biosynthetic process [Evidence IEA]
pyrroloquinoline quinone biosynthesis peptide chaperone PqqD
COORDINATES: similar to AA sequence:RefSeq:WP_014249837.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249838.1
pyrroloquinoline quinone biosynthesis protein PqqB
pyrroloquinoline quinone precursor peptide PqqA
COORDINATES: similar to AA sequence:RefSeq:WP_012976403.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249841.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249842.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249843.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976399.1
GO:0004456 - phosphogluconate dehydratase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976398.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_014242033.1
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014237547.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241981.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011385650.1
NrfD/PsrC family molybdoenzyme membrane anchor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014241979.1
COORDINATES: similar to AA sequence:RefSeq:WP_012234754.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
thiamine pyrophosphate-requiring protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976780.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976781.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249376.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249375.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249374.1
C4-dicarboxylate TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249373.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249372.1
GO:0004671 - protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity [Evidence IEA]
GO:0006481 - C-terminal protein methylation [Evidence IEA]
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249371.1
3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977326.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249367.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249366.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
Ni/Fe-hydrogenase, b-type cytochrome subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013913761.1
nickel-dependent hydrogenase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014249364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249363.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977321.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977320.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_014249360.1
[NiFe]-hydrogenase assembly chaperone HybE
COORDINATES: similar to AA sequence:RefSeq:WP_012977318.1
hydrogenase expression/formation protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249358.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249357.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_007190985.1
HyaD/HybD family hydrogenase maturation endopeptidase
COORDINATES: protein motif:HMM:TIGR02594.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976476.1
GO:0016151 - nickel cation binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976475.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249351.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249350.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976472.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249348.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249347.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188351.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014188352.1
GO:0050656 - 3'-phosphoadenosine 5'-phosphosulfate binding [Evidence IEA]; GO:0008146 - sulfotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015823591.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188354.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014240804.1
GO:0016166 - phytoene dehydrogenase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188356.1
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_014188358.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188219.1
COORDINATES: similar to AA sequence:RefSeq:WP_018991027.1
COORDINATES: similar to AA sequence:RefSeq:WP_013540551.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977286.1
GO:0020037 - heme binding [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977285.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977375.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_014249429.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249430.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200057.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977379.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249433.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249434.1
GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249435.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012977383.1
COORDINATES: protein motif:HMM:NF012235.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249809.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249808.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249807.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249806.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012977387.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977388.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249802.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249801.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249800.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249799.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249798.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249796.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249795.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977395.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977396.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977397.1
carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249790.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249492.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249493.1
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013501956.1
bifunctional protein-serine/threonine kinase/phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_012977401.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249496.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977403.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977404.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249498.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249499.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187986.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014187987.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014187988.1
COORDINATES: similar to AA sequence:RefSeq:WP_012331814.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187990.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187991.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187992.1
isocitrate lyase/phosphoenolpyruvate mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014187993.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187994.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197323.1
COORDINATES: similar to AA sequence:RefSeq:WP_008964096.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187997.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187998.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188406.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011812088.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977408.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919786.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188409.1
aromatic/alkene monooxygenase hydroxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014188410.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977412.1
aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014188412.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977414.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188414.1
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006334796.1
COORDINATES: similar to AA sequence:RefSeq:WP_015452268.1
catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004313705.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187985.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975889.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975890.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187981.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975892.1
COORDINATES: similar to AA sequence:RefSeq:WP_010093169.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187978.1
COORDINATES: protein motif:HMM:NF016807.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272043.1
COORDINATES: similar to AA sequence:RefSeq:WP_006461157.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977426.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188823.1
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977428.1
COORDINATES: similar to AA sequence:RefSeq:WP_006610858.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188773.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188774.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188775.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188776.1
COORDINATES: similar to AA sequence:RefSeq:WP_019830933.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745546.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014745547.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745548.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014745549.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661382.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745551.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014745552.1
COORDINATES: protein motif:HMM:NF018662.2
COORDINATES: similar to AA sequence:RefSeq:WP_014745553.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745554.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745555.1
COORDINATES: similar to AA sequence:RefSeq:WP_007818143.1
COORDINATES: similar to AA sequence:RefSeq:WP_007818146.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018494371.1
COORDINATES: similar to AA sequence:RefSeq:WP_012383554.1
COORDINATES: protein motif:HMM:NF024242.2
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977510.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977511.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977512.1
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977513.1
GO:0009975 - cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0032555 - purine ribonucleotide binding [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249520.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249521.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_014249523.1
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011388861.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011158919.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198135.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977520.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977521.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249528.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249529.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249530.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249531.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249532.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249533.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977531.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249535.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
SUF system Fe-S cluster assembly regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014249536.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249538.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977535.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249540.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0006534 - cysteine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249541.1
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977538.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977539.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_018062245.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249546.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249547.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249548.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977544.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977545.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249551.1
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_014249552.1
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249553.1
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249554.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_017632464.1
COORDINATES: similar to AA sequence:RefSeq:WP_007559953.1
COORDINATES: similar to AA sequence:RefSeq:WP_011518669.1
COORDINATES: similar to AA sequence:RefSeq:WP_006388666.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249558.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_014249559.1
GO:0008428 - ribonuclease inhibitor activity [Evidence IEA]
GO:0051252 - regulation of RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249560.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977549.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977550.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009540956.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977555.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249584.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249569.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249570.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249571.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249572.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012977559.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249576.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977561.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977562.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249579.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977564.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014249501.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977565.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249503.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249505.1
COORDINATES: similar to AA sequence:RefSeq:WP_009823605.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249585.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249586.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977568.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249588.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977570.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977571.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977572.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977573.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014249593.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240673.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_012977197.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977196.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249600.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249601.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015417 - ABC-type polyamine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
polyamine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977193.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977192.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
GDL motif peptide-associated radical SAM/SPASM maturase
COORDINATES: similar to AA sequence:RefSeq:WP_014249604.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249605.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249608.1
COORDINATES: similar to AA sequence:RefSeq:WP_013937736.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF021134.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012977188.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977187.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977186.1
COORDINATES: similar to AA sequence:RefSeq:WP_012974971.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248686.1
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014248696.1
GO:0016020 - membrane [Evidence IEA]; GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
monofunctional biosynthetic peptidoglycan transglycosylase
COORDINATES: similar to AA sequence:RefSeq:WP_014248695.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248692.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248691.1
tellurite resistance TerB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014248690.1
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: similar to AA sequence:RefSeq:WP_014248688.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248687.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249613.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977182.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249615.1
COORDINATES: similar to AA sequence:RefSeq:WP_008614878.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249617.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249618.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977177.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198347.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249621.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977174.1