Canis lupus dingo isolate Sandy chromosome 29, ASM325472v2, whole genome shotgun sequence.
type: Entry
definition: Canis lupus dingo isolate Sandy chromosome 29, ASM325472v2, whole genome shotgun sequence.
sequence version: NC_064271.1
sequence date: 2022-07-15
sequence: sequence
division: CON
label: NC_064271.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA477859
dblink: SAMN09397198
keyword: WGS
keyword: RefSeq
source: Canis lupus dingo (dingo)
organism: Canis lupus dingo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis.
reference: 1
references: 35452284
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025485.1.\nAssembly name: ASM325472v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the James Cook University on\n2020/09/11. The original whole-genome shotgun project has the\naccession QKWQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: James Cook University\nAssembly Date :: APR-2020\nAssembly Method :: FALCON v. 2017\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60.0x\nSequencing Technology :: PacBio Sequel; BioNano; Illumina (10X\n Chromium)\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: Canis lupus dingo Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 42053747
topology: linear
so has quality: SO_0000987
location: 1..42053747
location: region:1-42053747:1
RO_0002162: 286419

NC_064271
type: RefSeq
SIO_000068: refseq

PRJNA477859
type: BioProject
SIO_000068: bioproject

SAMN09397198
type: BioSample
SIO_000068: biosample

1
title: The Australian dingo is an early offshoot of modern breed dogs
author: Field, M.A.
author: Yadav, S.
author: Dudchenko, O.
author: Esvaran, M.
author: Rosen, B.D.
author: Skvortsova, K.
author: Edwards, R.J.
author: Keilwagen, J.
author: Cochran, B.J.
author: Manandhar, B.
author: Bustamante, S.
author: Rasmussen, J.A.
author: Melvin, R.G.
author: Chernoff, B.
author: Omer, A.
author: Colaric, Z.
author: Chan, E.K.F.
author: Minoche, A.E.
author: Smith, T.P.L.
author: Gilbert, M.T.P.
author: Bogdanovic, O.
author: Zammit, R.A.
author: Thomas, T.
author: Aiden, E.L.
author: Ballard, J.W.O.
journal: Sci Adv 8 (16), eabm5944 (2022)
pubmed: 35452284

35452284
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42053747:1
position: 42053747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42053747:1:source
so part of: sequence
organism: Canis lupus dingo
mol type: genomic DNA
isolate: Sandy
sub species: dingo
chromosome: 29
sex: female
tissue type: muscle

286419
type: Taxonomy
SIO_000068: taxonomy

PRKDC
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: PRKDC
note: protein kinase, DNA-activated, catalytic subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(206881..428525)
location: region:206881-428525:-1
so has part: feature:206881-428525:-1:exon
subclass of: SO_0000010

112678418
type: Gene
SIO_000068: ncbigene

position:206881:-1
position: 206881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428525:-1
position: 428525
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:206881-428525:-1:exon

PRKDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PRKDC
product: protein kinase, DNA-activated, catalytic subunit, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477681.3
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(206881..208731,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238813,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301141..301290,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,358642..358800,359264..359396,359820..360031,360743..360966,364632..364886,369401..369534,370819..370918,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,428323..428525))
location: region:206881-428525:-1
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PRKDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PRKDC
product: protein kinase, DNA-activated, catalytic subunit, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103971.1
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
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PRKDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PRKDC
product: protein kinase, DNA-activated, catalytic subunit, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477683.3
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
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PRKDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PRKDC
product: protein kinase, DNA-activated, catalytic subunit, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477682.3
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
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PRKDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PRKDC
product: protein kinase, DNA-activated, catalytic subunit, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477680.3
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(206881..208731,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238810,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301141..301290,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,358642..358800,359264..359396,359820..360031,360743..360966,364632..364886,369401..369534,370819..370918,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,406814..406933,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,428323..428525))
location: region:206881-428525:-1
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position:238810:-1
position: 238810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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PRKDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PRKDC
product: protein kinase, DNA-activated, catalytic subunit, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477679.3
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
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PRKDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PRKDC
product: protein kinase, DNA-activated, catalytic subunit, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103970.1
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
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SIO_000628: feature:360743-360966:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:359820-360031:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:359264-359396:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:358642-358800:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:357412-357615:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:347872-348057:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:347388-347492:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:346183-346350:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:342333-342460:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:332641-332848:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:328887-329065:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:327753-327921:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:327446-327511:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:326299-326371:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:324877-325025:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:322345-322479:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:322026-322145:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:313786-313929:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:310599-310750:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:309844-309975:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:303768-303879:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:301376-301500:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:301141-301290:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:299787-299960:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:298816-298914:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:297501-297708:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:295269-295458:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:293867-294079:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:288975-289087:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:286634-286765:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:283366-283545:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:272510-272715:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:269781-269919:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:268726-268914:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:267662-267886:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:266657-266765:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:264790-264901:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:249114-249303:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:240196-240370:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:238620-238813:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:237629-237809:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:235926-236086:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:232666-232877:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:231729-231816:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:231474-231617:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:226080-226284:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:224603-224670:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:223642-223862:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:223247-223339:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:220683-220772:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:220420-220491:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:220143-220344:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:219177-219365:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:218213-218352:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:206881-208731:-1:exon

PRKDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PRKDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent protein kinase catalytic subunit isoform X4
translation: MAESGSGARGSLLQLQESLSAGDRCSAAMASYQLIRGLGQECVLSSDPAVLALQTSLVFSKDFGLLVFVRKSLSIDEFRDCREEVLKFLYIFLEKIGQKITPYSLDIKTTCTSVYTKDKAAKCKIPALDLLIKLLRTLRSSRLMDEFSIGELFNKFYGELALKTKIQDTVLEKIYELLGVLAEVHPSEMINNSEKLFRAFLGELKIQMTSAIREPKLPVLAGCLKGLSSLMCNFTKSMEEDPQTSREIFDFALKAIRPQIDLKRYAVPLAGLCLFTLHASQFSTCLLDNYVSLFEVLSKWCSHTNVEMKKAAHSALESFLKQVSFMVAKDAEMHKSKLQYFMEQFYGIIRNMDSNSKDLSIAIRGYGLFAGPCKVINAKDVDFMYIELIQRCKQLFLTQIDTVDDHVYHMPSFLQSIASVLLYLDRVPEVYTPVLEHLMVAQIDSFPQYSPKMQSVCCKALVKVFLALGGKGPVLWNCISTVVHQGLIRICSKPVILQKGVESEPEEYRASGEVRTGKWKVPTYKDYLDLFRSLLSCDQMMDSLLADEAFLFVNSSLQNLNRLLYDEFVKSVLKIIEKLDLTLEKRNVGEHEDENEATGVWVIPTSDPAANLHPAKPKDFSAFINLVEFCRDILPEKHIEFFEPWVYSFAYELILQSTRLPLISGFYKLLSVAVRNAKKIKYFEGVGMKSQTQAPKDPEKYSCFALFAKFGKEMAFKLGLSYTPLAEVGLNALEEWSVCICKHIIQPHYKDILPSLDGYLKTSALSDETKNNWEVSALSQAAQKGFNQVVLKHLKKTKNISSNEALSLEEIRIRVVQMLGFLGGQINKNLLTATSSDEMMKKCVAWDREKRLSFAVPFIEMKPVIYLDVFLPRVTELALSASDRQTKVAACELLHSMVMFMLGKATQMPECGQGFPPMYQLYKRTFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLETILDGIVDPVDSTLRDFCGRCIREFLKWSIKQTTPQQQEKSPVNTKSLFKRLYSFALHPNAFKRLGASLAFNNIYREFREEESLVEQFVFEALVTYLESLALAHTDEKPLGTIRQCCDAIDHLRHIIEKKHVSLNKVKKRRRPRGFPPSASLCLLDMVQWLLAHCGRPQTECRHKSIELFYKFVPLLPGNKSPSLWLKDILKNKDTSFLINTFEGGGGSCDRPSGILVQPTLFHLQGPFSLRAALQWMDMLLAALECYNTFIEEKTLKAPDVLGTETQSSLWKAVAFFLDNIAMHDITAAEKCFGTGAAGHRPSPQEGERYNYSKCTIVVRIMEFTTTLLNTSPDGWKLLEEDLCNNKNFMTLLVKILCQPSSIGFNIGDVLVMNHLPDVCVNLMKALKKSPYKDTLEMCLKEKITVQSIEELCAVDLYGPDAYVDRATLASVVSACKQLHRAGVLHVVLPSQSADQRHSVGIKLLFLVYKSIAPGDEREYFPSLDPSCKRLASGLLELAFAFGGLCEHLVDLLLDTAVLSMPASGESQRNMVSFSHGEYFYSLFSEIINTELLRNLDMTVLKLMKSSVDNPKMVSAILNGMLDQSFRDRASRKQQGLKLASTILHNWKKWDSWWAKDSAPESKTAVLTLLAKILQIDSSVSFNTNHSAFPEVFTTYTSLLADSNLGLHLMGQAVILLPFFTNLTGGNLEDLEHVLEKLIVSNFPMKSEEFPVGTLRYSNYVDCMKKFLDALELSQSPVLLQLMTEILCREQQHVMEELFQSTFKKIARKSSCVTQLALLESVYRMFKRDDLLSNVTRQAFVDRSLLTLLWHCGLNALREFFGKIVVETIDVLKSRFTKLNESTFDTQITKKMGFYKMLDVMYSRLSKDDVHSKESKINQVFHGSCITEGNELTKTLIKLCYDAFTENMAGENQLLERRRLYHCAAYNCAISVICCVFTELKFYQGFLFSEKPEKNLLILENLIDLKRCYTFPIEVEVPMERKKKYIEIRKEAREAVNGDSDGPHYLSSLSYLADSSLS…
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(208527..208731,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238813,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301141..301290,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,358642..358800,359264..359396,359820..360031,360743..360966,364632..364886,369401..369534,370819..370918,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,428323..428476))
location: region:208527-428476:-1
so has part: feature:428323-428476:-1:exon
so has part: feature:426295-426371:-1:exon
so has part: feature:426104-426196:-1:exon
so has part: feature:423829-423903:-1:exon
so has part: feature:422976-423084:-1:exon
so has part: feature:422349-422461:-1:exon
so has part: feature:422163-422262:-1:exon
so has part: feature:416964-417019:-1:exon
so has part: feature:416846-416876:-1:exon
so has part: feature:416210-416367:-1:exon
so has part: feature:415510-415656:-1:exon
so has part: feature:413633-413797:-1:exon
so has part: feature:412987-413155:-1:exon
so has part: feature:412627-412676:-1:exon
so has part: feature:411890-412015:-1:exon
so has part: feature:410499-410651:-1:exon
so has part: feature:408679-408794:-1:exon
so has part: feature:408186-408345:-1:exon
so has part: feature:407368-407454:-1:exon
so has part: feature:406234-406393:-1:exon
so has part: feature:394562-394668:-1:exon
so has part: feature:392408-392498:-1:exon
so has part: feature:390846-391009:-1:exon
so has part: feature:389832-389984:-1:exon
so has part: feature:384037-384144:-1:exon
so has part: feature:380786-381012:-1:exon
so has part: feature:372429-372523:-1:exon
so has part: feature:370819-370918:-1:exon
so has part: feature:369401-369534:-1:exon
so has part: feature:364632-364886:-1:exon
so has part: feature:360743-360966:-1:exon
so has part: feature:359820-360031:-1:exon
so has part: feature:359264-359396:-1:exon
so has part: feature:358642-358800:-1:exon
so has part: feature:357412-357615:-1:exon
so has part: feature:347872-348057:-1:exon
so has part: feature:347388-347492:-1:exon
so has part: feature:346183-346350:-1:exon
so has part: feature:342333-342460:-1:exon
so has part: feature:332641-332848:-1:exon
so has part: feature:328887-329065:-1:exon
so has part: feature:327753-327921:-1:exon
so has part: feature:327446-327511:-1:exon
so has part: feature:326299-326371:-1:exon
so has part: feature:324877-325025:-1:exon
so has part: feature:322345-322479:-1:exon
so has part: feature:322026-322145:-1:exon
so has part: feature:313786-313929:-1:exon
so has part: feature:310599-310750:-1:exon
so has part: feature:309844-309975:-1:exon
so has part: feature:303768-303879:-1:exon
so has part: feature:301376-301500:-1:exon
so has part: feature:301141-301290:-1:exon
so has part: feature:299787-299960:-1:exon
so has part: feature:298816-298914:-1:exon
so has part: feature:297501-297708:-1:exon
so has part: feature:295269-295458:-1:exon
so has part: feature:293867-294079:-1:exon
so has part: feature:288975-289087:-1:exon
so has part: feature:286634-286765:-1:exon
so has part: feature:283366-283545:-1:exon
so has part: feature:272510-272715:-1:exon
so has part: feature:269781-269919:-1:exon
so has part: feature:268726-268914:-1:exon
so has part: feature:267662-267886:-1:exon
so has part: feature:266657-266765:-1:exon

XP_025333466.3
type: Protein
SIO_000068: ncbiprotein

position:208527:-1
position: 208527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428476:-1
position: 428476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428323-428476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426295-426371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426104-426196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423829-423903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422976-423084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422349-422461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422163-422262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:416964-417019:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416846-416876:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416210-416367:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415510-415656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:413633-413797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:412987-413155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:412627-412676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:411890-412015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:410499-410651:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:408679-408794:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:408186-408345:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407368-407454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:406234-406393:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:394562-394668:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:392408-392498:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:390846-391009:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:389832-389984:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:384037-384144:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:380786-381012:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:372429-372523:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:370819-370918:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:369401-369534:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:364632-364886:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:360743-360966:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:359820-360031:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:359264-359396:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:358642-358800:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:357412-357615:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:347872-348057:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:347388-347492:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:346183-346350:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:342333-342460:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:332641-332848:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:328887-329065:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:327753-327921:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:327446-327511:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:326299-326371:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:324877-325025:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:322345-322479:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:322026-322145:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:313786-313929:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:310599-310750:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:309844-309975:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:303768-303879:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:301376-301500:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:301141-301290:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:299787-299960:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:298816-298914:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:297501-297708:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:295269-295458:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:293867-294079:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:288975-289087:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:286634-286765:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:283366-283545:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:272510-272715:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:269781-269919:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:268726-268914:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:267662-267886:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:266657-266765:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:264790-264901:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:249114-249303:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:240196-240370:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:238620-238813:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:237629-237809:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:235926-236086:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:232666-232877:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:231729-231816:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:231474-231617:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:226080-226284:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:224603-224670:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:223642-223862:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:223247-223339:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:220683-220772:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:220420-220491:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:220143-220344:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:219177-219365:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:218213-218352:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:208527-208731:-1:exon

PRKDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PRKDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent protein kinase catalytic subunit isoform X7
translation: MAESGSGARGSLLQLQESLSAGDRCSAAMASYQLIRGLGQECVLSSDPAVLALQTSLVFSKDFGLLVFVRKSLSIDEFRDCREEVLKFLYIFLEKIGQKITPYSLDIKTTCTSVYTKDKAAKCKIPALDLLIKLLRTLRSSRLMDEFSIGELFNKFYGELALKTKIQDTVLEKIYELLGVLAEVHPSEMINNSEKLFRAFLGELKIQMTSAIREPKLPVLAGCLKGLSSLMCNFTKSMEEDPQTSREIFDFALKAIRPQIDLKRYAVPLAGLCLFTLHASQFSTCLLDNYVSLFEVLSKWCSHTNVEMKKAAHSALESFLKQVSFMVAKDAEMHKSKLQYFMEQFYGIIRNMDSNSKDLSIAIRGYGLFAGPCKVINAKDVDFMYIELIQRCKQLFLTQIDTVDDHVYHMPSFLQSIASVLLYLDRVPEVYTPVLEHLMVAQIDSFPQYSPKMQSVCCKALVKVFLALGGKGPVLWNCISTVVHQGLIRICSKPVILQKGVESEPEEYRASGEVRTGKWKVPTYKDYLDLFRSLLSCDQMMDSLLADEAFLFVNSSLQNLNRLLYDEFVKSVLKIIEKLDLTLEKRNVGEHEDENEATGVWVIPTSDPAANLHPAKPKDFSAFINLVEFCRDILPEKHIEFFEPWVYSFAYELILQSTRLPLISGFYKLLSVAVRNAKKIKYFEGVGMKSQTQAPKDPEKYSCFALFAKFGKEVTVKMKQYKDELLASCLTFILSLPHDIIELDIRAYIPALQMAFKLGLSYTPLAEVGLNALEEWSVCICKHIIQPHYKDILPSLDGYLKTSALSDETKNNWEVSALSQAAQKGFNQVVLKHLKKTKNISSNEALSLEEIRIRVVQMLGFLGGQINKNLLTATSSDEMMKKCVAWDREKRLSFAVPFIEMKPVIYLDVFLPRVTELALSASDRQTKVAACELLHSMVMFMLGKATQMPECGQGFPPMYQLYKRTFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLETILDGIVDPVDSTLRDFCGRCIREFLKWSIKQTTPQQQEKSPVNTKSLFKRLYSFALHPNAFKRLGASLAFNNIYREFREEESLVEQFVFEALVTYLESLALAHTDEKPLGNKSPSLWLKDILKNKDTSFLINTFEGGGGSCDRPSGILVQPTLFHLQGPFSLRAALQWMDMLLAALECYNTFIEEKTLKAPDVLGTETQSSLWKAVAFFLDNIAMHDITAAEKCFGTGAAGHRPSPQEGERYNYSKCTIVVRIMEFTTTLLNTSPDGWKLLEEDLCNNKNFMTLLVKILCQPSSIGFNIGDVLVMNHLPDVCVNLMKALKKSPYKDTLEMCLKEKITVQSIEELCAVDLYGPDAYVDRATLASVVSACKQLHRAGVLHVVLPSQSADQRHSVGIKLLFLVYKSIAPGDEREYFPSLDPSCKRLASGLLELAFAFGGLCEHLVDLLLDTAVLSMPASGESQRNMVSFSHGEYFYSLFSEIINTELLRNLDMTVLKLMKSSVDNPKMVSAILNGMLDQSFRDRASRKQQGLKLASTILHNWKKWDSWWAKDSAPESKTAVLTLLAKILQIDSSVSFNTNHSAFPEVFTTYTSLLADSNLGLHLMGQAVILLPFFTNLTGGNLEDLEHVLEKLIVSNFPMKSEEFPVGTLRYSNYVDCMKKFLDALELSQSPVLLQLMTEILCREQQHVMEELFQSTFKKIARKSSCVTQLALLESVYRMFKRDDLLSNVTRQAFVDRSLLTLLWHCGLNALREFFGKIVVETIDVLKSRFTKLNESTFDTQITKKMGFYKMLDVMYSRLSKDDVHSKESKINQVFHGSCITEGNELTKTLIKLCYDAFTENMAGENQLLERRRLYHCAAYNCAISVICCVFTELKFYQGFLFSEKPEKNLLILENLIDLKRCYTFPIEVEVPMERKKKYIEIRKEAREAVNGDSDGPHYLSSLSYLADSSLSEEMSQFDFSTGVQSYSYSSQDPKSTHGHFRRREHKDPM…
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(208527..208731,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238813,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301141..301290,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,358642..358800,359264..359396,359820..360031,360743..360966,364632..364886,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,406814..406933,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,428323..428476))
location: region:208527-428476:-1
so has part: feature:428323-428476:-1:exon
so has part: feature:426295-426371:-1:exon
so has part: feature:426104-426196:-1:exon
so has part: feature:423829-423903:-1:exon
so has part: feature:422976-423084:-1:exon
so has part: feature:422349-422461:-1:exon
so has part: feature:422163-422262:-1:exon
so has part: feature:416964-417019:-1:exon
so has part: feature:416846-416876:-1:exon
so has part: feature:416210-416367:-1:exon
so has part: feature:415510-415656:-1:exon
so has part: feature:413633-413797:-1:exon
so has part: feature:412987-413155:-1:exon
so has part: feature:412627-412676:-1:exon
so has part: feature:411890-412015:-1:exon
so has part: feature:410499-410651:-1:exon
so has part: feature:408679-408794:-1:exon
so has part: feature:408186-408345:-1:exon
so has part: feature:407368-407454:-1:exon
so has part: feature:406814-406933:-1:exon
so has part: feature:406234-406393:-1:exon
so has part: feature:394562-394668:-1:exon
so has part: feature:392408-392498:-1:exon
so has part: feature:390846-391009:-1:exon
so has part: feature:389832-389984:-1:exon
so has part: feature:384037-384144:-1:exon
so has part: feature:380786-381012:-1:exon
so has part: feature:372429-372523:-1:exon
so has part: feature:364632-364886:-1:exon
so has part: feature:360743-360966:-1:exon
so has part: feature:359820-360031:-1:exon
so has part: feature:359264-359396:-1:exon
so has part: feature:358642-358800:-1:exon
so has part: feature:357412-357615:-1:exon
so has part: feature:347872-348057:-1:exon
so has part: feature:347388-347492:-1:exon
so has part: feature:346183-346350:-1:exon
so has part: feature:342333-342460:-1:exon
so has part: feature:332641-332848:-1:exon
so has part: feature:328887-329065:-1:exon
so has part: feature:327753-327921:-1:exon
so has part: feature:327446-327511:-1:exon
so has part: feature:326299-326371:-1:exon
so has part: feature:324877-325025:-1:exon
so has part: feature:322345-322479:-1:exon
so has part: feature:322026-322145:-1:exon
so has part: feature:313786-313929:-1:exon
so has part: feature:310599-310750:-1:exon
so has part: feature:309844-309975:-1:exon
so has part: feature:303768-303879:-1:exon
so has part: feature:301376-301500:-1:exon
so has part: feature:301141-301290:-1:exon
so has part: feature:299787-299960:-1:exon
so has part: feature:298816-298914:-1:exon
so has part: feature:297501-297708:-1:exon
so has part: feature:295269-295458:-1:exon
so has part: feature:293867-294079:-1:exon
so has part: feature:288975-289087:-1:exon
so has part: feature:286634-286765:-1:exon
so has part: feature:283366-283545:-1:exon
so has part: feature:272510-272715:-1:exon
so has part: feature:269781-269919:-1:exon
so has part: feature:268726-268914:-1:exon
so has part: feature:267662-267886:-1:exon
so has part: feature:266657-266765:-1:exon
so has part: feature:264790-264901:-1:exon

XP_048959928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428323-428476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426295-426371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426104-426196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423829-423903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422976-423084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422349-422461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422163-422262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:416964-417019:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416846-416876:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416210-416367:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415510-415656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:413633-413797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:412987-413155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:412627-412676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:411890-412015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:410499-410651:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:408679-408794:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:408186-408345:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407368-407454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:406814-406933:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:406234-406393:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:394562-394668:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:392408-392498:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390846-391009:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:389832-389984:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:384037-384144:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:380786-381012:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:372429-372523:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:364632-364886:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:360743-360966:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:359820-360031:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:359264-359396:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:358642-358800:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:357412-357615:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:347872-348057:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:347388-347492:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:346183-346350:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:342333-342460:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:332641-332848:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:328887-329065:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:327753-327921:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:327446-327511:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:326299-326371:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:324877-325025:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:322345-322479:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:322026-322145:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:313786-313929:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:310599-310750:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:309844-309975:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:303768-303879:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:301376-301500:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:301141-301290:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:299787-299960:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:298816-298914:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:297501-297708:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:295269-295458:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:293867-294079:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:288975-289087:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:286634-286765:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:283366-283545:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:272510-272715:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:269781-269919:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:268726-268914:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:267662-267886:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:266657-266765:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:264790-264901:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:249114-249303:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:240196-240370:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:238620-238813:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:237629-237809:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:235926-236086:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:232666-232877:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:231729-231816:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:231474-231617:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:226080-226284:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:224603-224670:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:223642-223862:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:223247-223339:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:220683-220772:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:220420-220491:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:220143-220344:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:219177-219365:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:218213-218352:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:208527-208731:-1:exon

PRKDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PRKDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent protein kinase catalytic subunit isoform X6
translation: MAESGSGARGSLLQLQESLSAGDRCSAAMASYQLIRGLGQECVLSSDPAVLALQTSLVFSKDFGLLVFVRKSLSIDEFRDCREEVLKFLYIFLEKIGQKITPYSLDIKTTCTSVYTKDKAAKCKIPALDLLIKLLRTLRSSRLMDEFSIGELFNKFYGELALKTKIQDTVLEKIYELLGVLAEVHPSEMINNSEKLFRAFLGELKIQMTSAIREPKLPVLAGCLKGLSSLMCNFTKSMEEDPQTSREIFDFALKAIRPQIDLKRYAVPLAGLCLFTLHASQFSTCLLDNYVSLFEVLSKWCSHTNVEMKKAAHSALESFLKQVSFMVAKDAEMHKSKLQYFMEQFYGIIRNMDSNSKDLSIAIRGYGLFAGPCKVINAKDVDFMYIELIQRCKQLFLTQIDTVDDHVYHMPSFLQSIASVLLYLDRVPEVYTPVLEHLMVAQIDSFPQYSPKMQSVCCKALVKVFLALGGKGPVLWNCISTVVHQGLIRICSKPVILQKGVESEPEEYRASGEVRTGKWKVPTYKDYLDLFRSLLSCDQMMDSLLADEAFLFVNSSLQNLNRLLYDEFVKSVLKIIEKLDLTLEKRNVGEHEDENEATGVWVIPTSDPAANLHPAKPKDFSAFINLVEFCRDILPEKHIEFFEPWVYSFAYELILQSTRLPLISGFYKLLSVAVRNAKKIKYFEGVGMKSQTQAPKDPEKYSCFALFAKFGKEVTVKMKQYKDELLASCLTFILSLPHDIIELDIRAYIPALQMAFKLGLSYTPLAEVGLNALEEWSVCICKHIIQPHYKDILPSLDGYLKTSALSDETKNNWEVSALSQAAQKGFNQVVLKHLKKTKNISSNEALSLEEIRIRVVQMLGFLGGQINKNLLTATSSDEMMKKCVAWDREKRLSFAVPFIEMKPVIYLDVFLPRVTELALSASDRQTKVAACELLHSMVMFMLGKATQMPECGQGFPPMYQLYKRTFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLETILDGIVDPVDSTLRDFCGRCIREFLKWSIKQTTPQQQEKSPVNTKSLFKRLYSFALHPNAFKRLGASLAFNNIYREFREEESLVEQFVFEALVTYLESLALAHTDEKPLGTIRQCCDAIDHLRHIIEKKHVSLNKVKKRRRPRGFPPSASLCLLDMVQWLLAHCGRPQTECRHKSIELFYKFVPLLPGNKSPSLWLKDILKNKDTSFLINTFEGGGGSCDRPSGILVQPTLFHLQGPFSLRAALQWMDMLLAALECYNTFIEEKTLKAPDVLGTETQSSLWKAVAFFLDNIAMHDITAAEKCFGTGAAGHRPSPQEGERYNYSKCTIVVRIMEFTTTLLNTSPDGWKLLEEDLCNNKNFMTLLVKILCQPSSIGFNIGDVLVMNHLPDVCVNLMKALKKSPYKDTLEMCLKEKITVQSIEELCAVDLYGPDAYVDRATLASVVSACKQLHRAGVLHVVLPSQCEHLVDLLLDTAVLSMPASGESQRNMVSFSHGEYFYSLFSEIINTELLRNLDMTVLKLMKSSVDNPKMVSAILNGMLDQSFRDRASRKQQGLKLASTILHNWKKWDSWWAKDSAPESKTAVLTLLAKILQIDSSVSFNTNHSAFPEVFTTYTSLLADSNLGLHLMGQAVILLPFFTNLTGGNLEDLEHVLEKLIVSNFPMKSEEFPVGTLRYSNYVDCMKKFLDALELSQSPVLLQLMTEILCREQQHVMEELFQSTFKKIARKSSCVTQLALLESVYRMFKRDDLLSNVTRQAFVDRSLLTLLWHCGLNALREFFGKIVVETIDVLKSRFTKLNESTFDTQITKKMGFYKMLDVMYSRLSKDDVHSKESKINQVFHGSCITEGNELTKTLIKLCYDAFTENMAGENQLLERRRLYHCAAYNCAISVICCVFTELKFYQGFLFSEKPEKNLLILENLIDLKRCYTFPIEVEVPMERKKKYIEIRKEAREAVNGDSDGPHYLSSLSYLADSSLSEEMSQFDFSTGVQ…
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(208527..208731,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238813,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301141..301290,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,359264..359396,359820..360031,360743..360966,364632..364886,369401..369534,370819..370918,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,406814..406933,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,428323..428476))
location: region:208527-428476:-1
so has part: feature:428323-428476:-1:exon
so has part: feature:426295-426371:-1:exon
so has part: feature:426104-426196:-1:exon
so has part: feature:423829-423903:-1:exon
so has part: feature:422976-423084:-1:exon
so has part: feature:422349-422461:-1:exon
so has part: feature:422163-422262:-1:exon
so has part: feature:416964-417019:-1:exon
so has part: feature:416846-416876:-1:exon
so has part: feature:416210-416367:-1:exon
so has part: feature:415510-415656:-1:exon
so has part: feature:413633-413797:-1:exon
so has part: feature:412987-413155:-1:exon
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XP_025333468.3
type: Protein
SIO_000068: ncbiprotein

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SIO_000628: feature:208527-208731:-1:exon

PRKDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PRKDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent protein kinase catalytic subunit isoform X5
translation: MAESGSGARGSLLQLQESLSAGDRCSAAMASYQLIRGLGQECVLSSDPAVLALQTSLVFSKDFGLLVFVRKSLSIDEFRDCREEVLKFLYIFLEKIGQKITPYSLDIKTTCTSVYTKDKAAKCKIPALDLLIKLLRTLRSSRLMDEFSIGELFNKFYGELALKTKIQDTVLEKIYELLGVLAEVHPSEMINNSEKLFRAFLGELKIQMTSAIREPKLPVLAGCLKGLSSLMCNFTKSMEEDPQTSREIFDFALKAIRPQIDLKRYAVPLAGLCLFTLHASQFSTCLLDNYVSLFEVLSKWCSHTNVEMKKAAHSALESFLKQVSFMVAKDAEMHKSKLQYFMEQFYGIIRNMDSNSKDLSIAIRGYGLFAGPCKVINAKDVDFMYIELIQRCKQLFLTQIDTVDDHVYHMPSFLQSIASVLLYLDRVPEVYTPVLEHLMVAQIDSFPQYSPKMQSVCCKALVKVFLALGGKGPVLWNCISTVVHQGLIRICSKPVILQKGVESEPEEYRASGEVRTGKWKVPTYKDYLDLFRSLLSCDQMMDSLLADEAFLFVNSSLQNLNRLLYDEFVKSVLKIIEKLDLTLEKRNVGEHEDENEATGVWVIPTSDPAANLHPAKPKDFSAFINLVEFCRDILPEKHIEFFEPWVYSFAYELILQSTRLPLISGFYKLLSVAVRNAKKIKYFEGVGMKSQTQAPKDPEKYSCFALFAKFGKEVTVKMKQYKDELLASCLTFILSLPHDIIELDIRAYIPALQMAFKLGLSYTPLAEVGLNALEEWSVCICKHIIQPHYKDILPSLDGYLKTSALSDETKNNWEVSALSQAAQKGFNQVVLKHLKKTKNISSNEALSLEEIRIRVVQMLGFLGGQINKNLLTATSSDEMMKKCVAWDREKRLSFAVPFIEMKPVIYLDVFLPRVTELALSASDRQTKVAACELLHSMVMFMLGKATQMPECGQGFPPMYQLYKRTFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLETILDGIVDPVDSTLRDFCGRCIREFLKWSIKQTTPQQQEKSPVNTKSLFKRLYSFALHPNAFKRLGASLAFNNIYREFREEESLVEQFVFEALVTYLESLALAHTDEKPLGTIRQCCDAIDHLRHIIEKKHVSLNKVKKRRRPRGFPPSASLCLLDMVQWLLAHCGRPQTECRHKSIELFYKFVPLLPGNKSPSLWLKDILKNKDTSFLINTFEGGGGSCDRPSGILVQPTLFHLQGPFSLRAALQWMDMLLAALECYNTFIEEKTLKAPDVLGTETQSSLWKAVAFFLDNIAMHDITAAEKCFGTGAAGHRPSPQEGERYNYSKCTIVVRIMEFTTTLLNTSPDGWKLLEEDLCNNKNFMTLLVKILCQPSSIGFNIGDVLVMNHLPDVCVNLMKALKKSPYKDTLEMCLKEKITVQSIEELCAVDLYGPDAYVDRATLASVVSACKQLHRAGVLHVVLPSQSADQRHSVGIKLLFLVYKSIAPGDEREYFPSLDPSCKRLASGLLELAFAFGGLCEHLVDLLLDTAVLSMPASGESQRNMVSFSHGEYFYSLFSEIINTELLRNLDMTVLKLMKSSVDNPKMVSAILNGMLDQSFRDRASRKQQGLKLASTILHNWKKWDSWWAKDSAPESKTAVLTLLAKILQIDSSVSFNTNHSAFPEVFTTYTSLLADSNLGLHLMGQAVILLPFFTNLTGGNLEDLEHVLEKLIVSNFPMKSEEFPVGTLRYSNYVDCMKKFLDALELSQSPVLLQLMTEILCREQQHVMEELFQSTFKKIARKSSCVTQLALLESVYRMFKRDDLLSNVTRQAFVDRSLLTLLWHCGLNALREFFGKIVVETIDVLKSRFTKLNESTFDTQITKKMGFYKMLDVMYSRLSKDDVHSKESKINQVFHGSCITEGNELTKTLIKLCYDAFTENMAGENQLLERRRLYHCAAYNCAISVICCVFTELKFYQGFLFSEKPEKNLLILENLIDLKRCYTFPIEVEVP…
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(208527..208731,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238813,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,358642..358800,359264..359396,359820..360031,360743..360966,364632..364886,369401..369534,370819..370918,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,406814..406933,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,428323..428476))
location: region:208527-428476:-1
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XP_025333467.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428323-428476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426295-426371:-1:exon

urn:…
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SIO_000628: feature:426104-426196:-1:exon

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SIO_000300: 4
SIO_000628: feature:423829-423903:-1:exon

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SIO_000300: 7
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SIO_000628: feature:416964-417019:-1:exon

urn:…
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SIO_000628: feature:416846-416876:-1:exon

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SIO_000628: feature:416210-416367:-1:exon

urn:…
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SIO_000628: feature:411890-412015:-1:exon

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SIO_000628: feature:407368-407454:-1:exon

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SIO_000628: feature:406814-406933:-1:exon

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SIO_000628: feature:406234-406393:-1:exon

urn:…
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SIO_000628: feature:394562-394668:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:392408-392498:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390846-391009:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:389832-389984:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:384037-384144:-1:exon

urn:…
SIO_000300: 27
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urn:…
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SIO_000628: feature:313786-313929:-1:exon

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urn:…
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SIO_000628: feature:303768-303879:-1:exon

urn:…
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SIO_000628: feature:301376-301500:-1:exon

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SIO_000628: feature:295269-295458:-1:exon

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SIO_000628: feature:268726-268914:-1:exon

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SIO_000628: feature:264790-264901:-1:exon

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SIO_000628: feature:249114-249303:-1:exon

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SIO_000300: 69
SIO_000628: feature:240196-240370:-1:exon

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SIO_000628: feature:235926-236086:-1:exon

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SIO_000628: feature:232666-232877:-1:exon

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SIO_000628: feature:231474-231617:-1:exon

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urn:…
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SIO_000628: feature:223642-223862:-1:exon

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SIO_000628: feature:223247-223339:-1:exon

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SIO_000628: feature:220683-220772:-1:exon

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urn:…
SIO_000300: 85
SIO_000628: feature:208527-208731:-1:exon

PRKDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PRKDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent protein kinase catalytic subunit isoform X2
translation: MAESGSGARGSLLQLQESLSAGDRCSAAMASYQLIRGLGQECVLSSDPAVLALQTSLVFSKDFGLLVFVRKSLSIDEFRDCREEVLKFLYIFLEKIGQKITPYSLDIKTTCTSVYTKDKAAKCKIPALDLLIKLLRTLRSSRLMDEFSIGELFNKFYGELALKTKIQDTVLEKIYELLGVLAEVHPSEMINNSEKLFRAFLGELKIQMTSAIREPKLPVLAGCLKGLSSLMCNFTKSMEEDPQTSREIFDFALKAIRPQIDLKRYAVPLAGLCLFTLHASQFSTCLLDNYVSLFEVLSKWCSHTNVEMKKAAHSALESFLKQVSFMVAKDAEMHKSKLQYFMEQFYGIIRNMDSNSKDLSIAIRGYGLFAGPCKVINAKDVDFMYIELIQRCKQLFLTQIDTVDDHVYHMPSFLQSIASVLLYLDRVPEVYTPVLEHLMVAQIDSFPQYSPKMQSVCCKALVKVFLALGGKGPVLWNCISTVVHQGLIRICSKPVILQKGVESEPEEYRASGEVRTGKWKVPTYKDYLDLFRSLLSCDQMMDSLLADEAFLFVNSSLQNLNRLLYDEFVKSVLKIIEKLDLTLEKRNVGEHEDENEATGVWVIPTSDPAANLHPAKPKDFSAFINLVEFCRDILPEKHIEFFEPWVYSFAYELILQSTRLPLISGFYKLLSVAVRNAKKIKYFEGVGMKSQTQAPKDPEKYSCFALFAKFGKEVTVKMKQYKDELLASCLTFILSLPHDIIELDIRAYIPALQMAFKLGLSYTPLAEVGLNALEEWSVCICKHIIQPHYKDILPSLDGYLKTSALSDETKNNWEVSALSQAAQKGFNQVVLKHLKKTKNISSNEALSLEEIRIRVVQMLGFLGGQINKNLLTATSSDEMMKKCVAWDREKRLSFAVPFIEMKPVIYLDVFLPRVTELALSASDRQTKVAACELLHSMVMFMLGKATQMPECGQGFPPMYQLYKRTFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLETILDGIVDPVDSTLRDFCGRCIREFLKWSIKQTTPQQQEKSPVNTKSLFKRLYSFALHPNAFKRLGASLAFNNIYREFREEESLVEQFVFEALVTYLESLALAHTDEKPLGTIRQCCDAIDHLRHIIEKKHVSLNKVKKRRRPRGFPPSASLCLLDMVQWLLAHCGRPQTECRHKSIELFYKFVPLLPGNKSPSLWLKDILKNKDTSFLINTFEGGGGSCDRPSGILVQPTLFHLQGPFSLRAALQWMDMLLAALECYNTFIEEKTLKAPDVLGTETQSSLWKAVAFFLDNIAMHDITAAEKCFGTGAAGHRPSPQEGERYNYSKCTIVVRIMEFTTTLLNTSPDGWKLLEEDLCNNKNFMTLLVKILCQPSSIGFNIGDVLVMNHLPDVCVNLMKALKKSPYKDTLEMCLKEKITVQSIEELCAVDLYGPDAYVDRATLASVVSACKQLHRAGVLHVVLPSQSADQRHSVGIKLLFLVYKSIAPGDEREYFPSLDPSCKRLASGLLELAFAFGGLCEHLVDLLLDTAVLSMPASGESQRNMVSFSHGEYFYSLFSEIINTELLRNLDMTVLKLMKSSVDNPKMVSAILNGMLDQSFRDRASRKQQGLKLASTILHNWKKWDSWWAKDSAPESKTAVLTLLAKILQIDSSVSFNTNHSAFPEVFTTYTSLLADSNLGLHLMGQAVILLPFFTNLTGGNLEDLEHVLEKLIVSNFPMKSEEFPVGTLRYSNYVDCMKKFLDALELSQSPVLLQLMTEILCREQQHVMEELFQSTFKKIARKSSCVTQLALLESVYRMFKRDDLLSNVTRQAFVDRSLLTLLWHCGLNALREFFGKIVVETIDVLKSRFTKLNESTFDTQITKKMGFYKMLDVMYSRLSKDDVHSKESKINQVFHGSCITEGNELTKTLIKLCYDAFTENMAGENQLLERRRLYHCAAYNCAISVICCVFTELKFYQGFLFSEKPEKNLLILENLIDLKRCYTFPIEVEVP…
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(208527..208731,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238810,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301141..301290,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,358642..358800,359264..359396,359820..360031,360743..360966,364632..364886,369401..369534,370819..370918,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,406814..406933,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,428323..428476))
location: region:208527-428476:-1
so has part: feature:428323-428476:-1:exon
so has part: feature:426295-426371:-1:exon
so has part: feature:426104-426196:-1:exon
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so has part: feature:267662-267886:-1:exon

XP_025333465.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428323-428476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426295-426371:-1:exon

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urn:…
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SIO_000628: feature:411890-412015:-1:exon

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urn:…
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SIO_000628: feature:394562-394668:-1:exon

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SIO_000628: feature:392408-392498:-1:exon

urn:…
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urn:…
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SIO_000628: feature:389832-389984:-1:exon

urn:…
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SIO_000628: feature:384037-384144:-1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:370819-370918:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:369401-369534:-1:exon

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urn:…
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urn:…
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urn:…
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SIO_000628: feature:347872-348057:-1:exon

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SIO_000628: feature:219177-219365:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:218213-218352:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:208527-208731:-1:exon

PRKDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PRKDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent protein kinase catalytic subunit isoform X1
translation: MAESGSGARGSLLQLQESLSAGDRCSAAMASYQLIRGLGQECVLSSDPAVLALQTSLVFSKDFGLLVFVRKSLSIDEFRDCREEVLKFLYIFLEKIGQKITPYSLDIKTTCTSVYTKDKAAKCKIPALDLLIKLLRTLRSSRLMDEFSIGELFNKFYGELALKTKIQDTVLEKIYELLGVLAEVHPSEMINNSEKLFRAFLGELKIQMTSAIREPKLPVLAGCLKGLSSLMCNFTKSMEEDPQTSREIFDFALKAIRPQIDLKRYAVPLAGLCLFTLHASQFSTCLLDNYVSLFEVLSKWCSHTNVEMKKAAHSALESFLKQVSFMVAKDAEMHKSKLQYFMEQFYGIIRNMDSNSKDLSIAIRGYGLFAGPCKVINAKDVDFMYIELIQRCKQLFLTQIDTVDDHVYHMPSFLQSIASVLLYLDRVPEVYTPVLEHLMVAQIDSFPQYSPKMQSVCCKALVKVFLALGGKGPVLWNCISTVVHQGLIRICSKPVILQKGVESEPEEYRASGEVRTGKWKVPTYKDYLDLFRSLLSCDQMMDSLLADEAFLFVNSSLQNLNRLLYDEFVKSVLKIIEKLDLTLEKRNVGEHEDENEATGVWVIPTSDPAANLHPAKPKDFSAFINLVEFCRDILPEKHIEFFEPWVYSFAYELILQSTRLPLISGFYKLLSVAVRNAKKIKYFEGVGMKSQTQAPKDPEKYSCFALFAKFGKEVTVKMKQYKDELLASCLTFILSLPHDIIELDIRAYIPALQMAFKLGLSYTPLAEVGLNALEEWSVCICKHIIQPHYKDILPSLDGYLKTSALSDETKNNWEVSALSQAAQKGFNQVVLKHLKKTKNISSNEALSLEEIRIRVVQMLGFLGGQINKNLLTATSSDEMMKKCVAWDREKRLSFAVPFIEMKPVIYLDVFLPRVTELALSASDRQTKVAACELLHSMVMFMLGKATQMPECGQGFPPMYQLYKRTFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLETILDGIVDPVDSTLRDFCGRCIREFLKWSIKQTTPQQQEKSPVNTKSLFKRLYSFALHPNAFKRLGASLAFNNIYREFREEESLVEQFVFEALVTYLESLALAHTDEKPLGTIRQCCDAIDHLRHIIEKKHVSLNKVKKRRRPRGFPPSASLCLLDMVQWLLAHCGRPQTECRHKSIELFYKFVPLLPGNKSPSLWLKDILKNKDTSFLINTFEGGGGSCDRPSGILVQPTLFHLQGPFSLRAALQWMDMLLAALECYNTFIEEKTLKAPDVLGTETQSSLWKAVAFFLDNIAMHDITAAEKCFGTGAAGHRPSPQEGERYNYSKCTIVVRIMEFTTTLLNTSPDGWKLLEEDLCNNKNFMTLLVKILCQPSSIGFNIGDVLVMNHLPDVCVNLMKALKKSPYKDTLEMCLKEKITVQSIEELCAVDLYGPDAYVDRATLASVVSACKQLHRAGVLHVVLPSQSADQRHSVGIKLLFLVYKSIAPGDEREYFPSLDPSCKRLASGLLELAFAFGGLCEHLVDLLLDTAVLSMPASGESQRNMVSFSHGEYFYSLFSEIINTELLRNLDMTVLKLMKSSVDNPKMVSAILNGMLDQSFRDRASRKQQGLKLASTILHNWKKWDSWWAKDSAPESKTAVLTLLAKILQIDSSVSFNTNHSAFPEVFTTYTSLLADSNLGLHLMGQAVILLPFFTNLTGGNLEDLEHVLEKLIVSNFPMKSEEFPVGTLRYSNYVDCMKKFLDALELSQSPVLLQLMTEILCREQQHVMEELFQSTFKKIARKSSCVTQLALLESVYRMFKRDDLLSNVTRQAFVDRSLLTLLWHCGLNALREFFGKIVVETIDVLKSRFTKLNESTFDTQITKKMGFYKMLDVMYSRLSKDDVHSKESKINQVFHGSCITEGNELTKTLIKLCYDAFTENMAGENQLLERRRLYHCAAYNCAISVICCVFTELKFYQGFLFSEKPEKNLLILENLIDLKRCYTFPIEVEVP…
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(208527..208731,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238813,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301141..301290,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,358642..358800,359264..359396,359820..360031,360743..360966,364632..364886,369401..369534,370819..370918,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,406814..406933,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,428323..428476))
location: region:208527-428476:-1
so has part: feature:428323-428476:-1:exon
so has part: feature:426295-426371:-1:exon
so has part: feature:426104-426196:-1:exon
so has part: feature:423829-423903:-1:exon
so has part: feature:422976-423084:-1:exon
so has part: feature:422349-422461:-1:exon
so has part: feature:422163-422262:-1:exon
so has part: feature:416964-417019:-1:exon
so has part: feature:416846-416876:-1:exon
so has part: feature:416210-416367:-1:exon
so has part: feature:415510-415656:-1:exon
so has part: feature:413633-413797:-1:exon
so has part: feature:412987-413155:-1:exon
so has part: feature:412627-412676:-1:exon
so has part: feature:411890-412015:-1:exon
so has part: feature:410499-410651:-1:exon
so has part: feature:408679-408794:-1:exon
so has part: feature:408186-408345:-1:exon
so has part: feature:407368-407454:-1:exon
so has part: feature:406814-406933:-1:exon
so has part: feature:406234-406393:-1:exon
so has part: feature:394562-394668:-1:exon
so has part: feature:392408-392498:-1:exon
so has part: feature:390846-391009:-1:exon
so has part: feature:389832-389984:-1:exon
so has part: feature:384037-384144:-1:exon
so has part: feature:380786-381012:-1:exon
so has part: feature:372429-372523:-1:exon
so has part: feature:370819-370918:-1:exon
so has part: feature:369401-369534:-1:exon
so has part: feature:364632-364886:-1:exon
so has part: feature:360743-360966:-1:exon
so has part: feature:359820-360031:-1:exon
so has part: feature:359264-359396:-1:exon
so has part: feature:358642-358800:-1:exon
so has part: feature:357412-357615:-1:exon
so has part: feature:347872-348057:-1:exon
so has part: feature:347388-347492:-1:exon
so has part: feature:346183-346350:-1:exon
so has part: feature:342333-342460:-1:exon
so has part: feature:332641-332848:-1:exon
so has part: feature:328887-329065:-1:exon
so has part: feature:327753-327921:-1:exon
so has part: feature:327446-327511:-1:exon
so has part: feature:326299-326371:-1:exon
so has part: feature:324877-325025:-1:exon
so has part: feature:322345-322479:-1:exon
so has part: feature:322026-322145:-1:exon
so has part: feature:313786-313929:-1:exon
so has part: feature:310599-310750:-1:exon
so has part: feature:309844-309975:-1:exon
so has part: feature:303768-303879:-1:exon
so has part: feature:301376-301500:-1:exon
so has part: feature:301141-301290:-1:exon
so has part: feature:299787-299960:-1:exon
so has part: feature:298816-298914:-1:exon
so has part: feature:297501-297708:-1:exon
so has part: feature:295269-295458:-1:exon
so has part: feature:293867-294079:-1:exon
so has part: feature:288975-289087:-1:exon
so has part: feature:286634-286765:-1:exon
so has part: feature:283366-283545:-1:exon
so has part: feature:272510-272715:-1:exon
so has part: feature:269781-269919:-1:exon
so has part: feature:268726-268914:-1:exon
so has part: feature:267662-267886:-1:exon

XP_025333464.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428323-428476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426295-426371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426104-426196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423829-423903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422976-423084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422349-422461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422163-422262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:416964-417019:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416846-416876:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416210-416367:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415510-415656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:413633-413797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:412987-413155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:412627-412676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:411890-412015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:410499-410651:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:408679-408794:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:408186-408345:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407368-407454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:406814-406933:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:406234-406393:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:394562-394668:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:392408-392498:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390846-391009:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:389832-389984:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:384037-384144:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:380786-381012:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:372429-372523:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:370819-370918:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:369401-369534:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:364632-364886:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:360743-360966:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:359820-360031:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:359264-359396:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:358642-358800:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:357412-357615:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:347872-348057:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:347388-347492:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:346183-346350:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:342333-342460:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:332641-332848:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:328887-329065:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:327753-327921:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:327446-327511:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:326299-326371:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:324877-325025:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:322345-322479:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:322026-322145:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:313786-313929:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:310599-310750:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:309844-309975:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:303768-303879:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:301376-301500:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:301141-301290:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:299787-299960:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:298816-298914:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:297501-297708:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:295269-295458:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:293867-294079:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:288975-289087:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:286634-286765:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:283366-283545:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:272510-272715:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:269781-269919:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:268726-268914:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:267662-267886:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:266657-266765:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:264790-264901:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:249114-249303:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:240196-240370:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:238620-238813:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:237629-237809:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:235926-236086:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:232666-232877:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:231729-231816:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:231474-231617:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:226080-226284:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:224603-224670:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:223642-223862:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:223247-223339:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:220683-220772:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:220420-220491:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:220143-220344:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:219177-219365:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:218213-218352:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:208527-208731:-1:exon

PRKDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PRKDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent protein kinase catalytic subunit isoform X3
translation: MLQKKQREPKEALQTSLVFSKDFGLLVFVRKSLSIDEFRDCREEVLKFLYIFLEKIGQKITPYSLDIKTTCTSVYTKDKAAKCKIPALDLLIKLLRTLRSSRLMDEFSIGELFNKFYGELALKTKIQDTVLEKIYELLGVLAEVHPSEMINNSEKLFRAFLGELKIQMTSAIREPKLPVLAGCLKGLSSLMCNFTKSMEEDPQTSREIFDFALKAIRPQIDLKRYAVPLAGLCLFTLHASQFSTCLLDNYVSLFEVLSKWCSHTNVEMKKAAHSALESFLKQVSFMVAKDAEMHKSKLQYFMEQFYGIIRNMDSNSKDLSIAIRGYGLFAGPCKVINAKDVDFMYIELIQRCKQLFLTQIDTVDDHVYHMPSFLQSIASVLLYLDRVPEVYTPVLEHLMVAQIDSFPQYSPKMQSVCCKALVKVFLALGGKGPVLWNCISTVVHQGLIRICSKPVILQKGVESEPEEYRASGEVRTGKWKVPTYKDYLDLFRSLLSCDQMMDSLLADEAFLFVNSSLQNLNRLLYDEFVKSVLKIIEKLDLTLEKRNVGEHEDENEATGVWVIPTSDPAANLHPAKPKDFSAFINLVEFCRDILPEKHIEFFEPWVYSFAYELILQSTRLPLISGFYKLLSVAVRNAKKIKYFEGVGMKSQTQAPKDPEKYSCFALFAKFGKEVTVKMKQYKDELLASCLTFILSLPHDIIELDIRAYIPALQMAFKLGLSYTPLAEVGLNALEEWSVCICKHIIQPHYKDILPSLDGYLKTSALSDETKNNWEVSALSQAAQKGFNQVVLKHLKKTKNISSNEALSLEEIRIRVVQMLGFLGGQINKNLLTATSSDEMMKKCVAWDREKRLSFAVPFIEMKPVIYLDVFLPRVTELALSASDRQTKVAACELLHSMVMFMLGKATQMPECGQGFPPMYQLYKRTFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLETILDGIVDPVDSTLRDFCGRCIREFLKWSIKQTTPQQQEKSPVNTKSLFKRLYSFALHPNAFKRLGASLAFNNIYREFREEESLVEQFVFEALVTYLESLALAHTDEKPLGTIRQCCDAIDHLRHIIEKKHVSLNKVKKRRRPRGFPPSASLCLLDMVQWLLAHCGRPQTECRHKSIELFYKFVPLLPGNKSPSLWLKDILKNKDTSFLINTFEGGGGSCDRPSGILVQPTLFHLQGPFSLRAALQWMDMLLAALECYNTFIEEKTLKAPDVLGTETQSSLWKAVAFFLDNIAMHDITAAEKCFGTGAAGHRPSPQEGERYNYSKCTIVVRIMEFTTTLLNTSPDGWKLLEEDLCNNKNFMTLLVKILCQPSSIGFNIGDVLVMNHLPDVCVNLMKALKKSPYKDTLEMCLKEKITVQSIEELCAVDLYGPDAYVDRATLASVVSACKQLHRAGVLHVVLPSQSADQRHSVGIKLLFLVYKSIAPGDEREYFPSLDPSCKRLASGLLELAFAFGGLCEHLVDLLLDTAVLSMPASGESQRNMVSFSHGEYFYSLFSEIINTELLRNLDMTVLKLMKSSVDNPKMVSAILNGMLDQSFRDRASRKQQGLKLASTILHNWKKWDSWWAKDSAPESKTAVLTLLAKILQIDSSVSFNTNHSAFPEVFTTYTSLLADSNLGLHLMGQAVILLPFFTNLTGGNLEDLEHVLEKLIVSNFPMKSEEFPVGTLRYSNYVDCMKKFLDALELSQSPVLLQLMTEILCREQQHVMEELFQSTFKKIARKSSCVTQLALLESVYRMFKRDDLLSNVTRQAFVDRSLLTLLWHCGLNALREFFGKIVVETIDVLKSRFTKLNESTFDTQITKKMGFYKMLDVMYSRLSKDDVHSKESKINQVFHGSCITEGNELTKTLIKLCYDAFTENMAGENQLLERRRLYHCAAYNCAISVICCVFTELKFYQGFLFSEKPEKNLLILENLIDLKRCYTFPIEVEVPMERKKKYIEIRKEAREAVNGDSDGPHYLSSLSYLADSSLS…
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(208527..208731,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238813,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301141..301290,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,358642..358800,359264..359396,359820..360031,360743..360966,364632..364886,369401..369534,370819..370918,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,406814..406933,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,427979..428012))
location: region:208527-428012:-1
so has part: feature:427979-428012:-1:exon
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XP_048959927.1
type: Protein
SIO_000068: ncbiprotein

position:428012:-1
position: 428012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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SIO_000628: feature:208527-208731:-1:exon

PRKDC
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PRKDC
product: protein kinase, DNA-activated, catalytic subunit, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 long SRA reads, 1 Protein
transcript id: XR_004810577.2
SIO_010081: PRKDC
so part of: PRKDC
location: complement(join(208593..208731,216156..216255,218213..218352,219177..219365,220143..220344,220420..220491,220683..220772,223247..223339,223642..223862,224603..224670,226080..226284,231474..231617,231729..231816,232666..232877,235926..236086,237629..237809,238620..238813,240196..240370,249114..249303,264790..264901,266657..266765,267662..267886,268726..268914,269781..269919,272510..272715,283366..283545,286634..286765,288975..289087,293867..294079,295269..295458,297501..297708,298816..298914,299787..299960,301141..301290,301376..301500,303768..303879,309844..309975,310599..310750,313786..313929,322026..322145,322345..322479,324877..325025,326299..326371,327446..327511,327753..327921,328887..329065,332641..332848,342333..342460,346183..346350,347388..347492,347872..348057,357412..357615,358642..358800,359264..359396,359820..360031,360743..360966,364632..364886,369401..369534,370819..370918,372429..372523,380786..381012,384037..384144,389832..389984,390846..391009,392408..392498,394562..394668,406234..406393,406814..406933,407368..407454,408186..408345,408679..408794,410499..410651,411890..412015,412627..412676,412987..413155,413633..413797,415510..415656,416210..416367,416846..416876,416964..417019,422163..422262,422349..422461,422976..423084,423829..423903,426104..426196,426295..426371,428323..428525))
location: region:208593-428525:-1
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position:208593:-1
position: 208593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 49
SIO_000628: feature:313786-313929:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:310599-310750:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:309844-309975:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:303768-303879:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:301376-301500:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:301141-301290:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:299787-299960:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:298816-298914:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:297501-297708:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:295269-295458:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:293867-294079:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:288975-289087:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:286634-286765:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:283366-283545:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:272510-272715:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:269781-269919:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:268726-268914:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:267662-267886:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:266657-266765:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:264790-264901:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:249114-249303:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:240196-240370:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:238620-238813:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:237629-237809:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:235926-236086:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:232666-232877:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:231729-231816:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:231474-231617:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:226080-226284:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:224603-224670:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:223642-223862:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:223247-223339:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:220683-220772:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:220420-220491:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:220143-220344:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:219177-219365:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:218213-218352:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:216156-216255:-1:exon

position:216156:-1
position: 216156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216255:-1
position: 216255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 87
SIO_000628: feature:208593-208731:-1:exon

MCM4
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: MCM4
note: minichromosome maintenance complex component 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 429188..446162
location: region:429188-446162:1
so has part: feature:429188-446162:1:exon
subclass of: SO_0000010

112678419
type: Gene
SIO_000068: ncbigene

position:429188:1
position: 429188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446162:1
position: 446162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429188-446162:1:exon

MCM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: MCM4
product: minichromosome maintenance complex component 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477687.3
SIO_010081: MCM4
subclass of: SO_0000673
so part of: MCM4
location: join(429188..429410,429789..429953,430253..430416,430511..430612,431113..431208,431290..431385,432805..432943,433909..434129,437663..437783,439179..439438,439879..440244,440704..440831,441817..442024,443390..443618,444599..444732,445515..446162)
location: region:429188-446162:1
so has part: feature:429188-429410:1:exon
so has part: feature:429789-429953:1:exon
so has part: feature:430253-430416:1:exon
so has part: feature:430511-430612:1:exon
so has part: feature:431113-431208:1:exon
so has part: feature:431290-431385:1:exon
so has part: feature:432805-432943:1:exon
so has part: feature:433909-434129:1:exon
so has part: feature:437663-437783:1:exon
so has part: feature:439179-439438:1:exon
so has part: feature:439879-440244:1:exon
so has part: feature:440704-440831:1:exon
so has part: feature:441817-442024:1:exon
so has part: feature:443390-443618:1:exon
so has part: feature:444599-444732:1:exon
so has part: feature:445515-446162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429188-429410:1:exon

position:429410:1
position: 429410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429789-429953:1:exon

position:429789:1
position: 429789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429953:1
position: 429953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:430253-430416:1:exon

position:430253:1
position: 430253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430416:1
position: 430416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:430511-430612:1:exon

position:430511:1
position: 430511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430612:1
position: 430612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431113-431208:1:exon

position:431113:1
position: 431113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431208:1
position: 431208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431290-431385:1:exon

position:431290:1
position: 431290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431385:1
position: 431385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:432805-432943:1:exon

position:432805:1
position: 432805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432943:1
position: 432943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:433909-434129:1:exon

position:433909:1
position: 433909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434129:1
position: 434129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:437663-437783:1:exon

position:437663:1
position: 437663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437783:1
position: 437783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:439179-439438:1:exon

position:439179:1
position: 439179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439438:1
position: 439438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:439879-440244:1:exon

position:439879:1
position: 439879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440244:1
position: 440244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:440704-440831:1:exon

position:440704:1
position: 440704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440831:1
position: 440831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:441817-442024:1:exon

position:441817:1
position: 441817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442024:1
position: 442024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:443390-443618:1:exon

position:443390:1
position: 443390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443618:1
position: 443618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:444599-444732:1:exon

position:444599:1
position: 444599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444732:1
position: 444732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:445515-446162:1:exon

position:445515:1
position: 445515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: MCM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication licensing factor MCM4
translation: MSSPASTPSRRGSRRGRTTPAQTPRSEDARSSPHQRRRGDDSTSTGELQPMPTSPGADLHSPAAHDALFSSPAQIQPSTIPLDFDVSSPLTYGTPSSRVDGTPRSGVRGTPVRQRPDLGSARKGLQVDLQTEVPATEDIVASEQALGQKLVIWGTDVNVATCKENFQRFLQHFIDPLAKEEETIGIDITEPLYMQRLGEINVIGEPFLNVNCEHIQSFDKNLYRQLICYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKNMRNLNPDDIDQLIAISGMVIRTSQLIPEMQEAFFQCQVCAHTARVEIDRGRIAEPSVCEHCHTTHSMALIHNRSVFSDKQMIKLQESPEDMPAGQTPHTVILFAHNDLVDKVQPGDRVNITGIYRAVPIRVSSRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSILAAANPVESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVALYYRSEEQMEEEFMDMAVLKDYIAYAHSMVMPRLSQEASQALIEAYVDMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSSKVEAVDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALKKLILSKGKTPALKYQQLFEDIRGQSDIAITKDMFEEALRALADDDFLTVTGKTVRLL
SIO_010081: MCM4
subclass of: SO_0000673
so part of: MCM4
location: join(429341..429410,429789..429953,430253..430416,430511..430612,431113..431208,431290..431385,432805..432943,433909..434129,437663..437783,439179..439438,439879..440244,440704..440831,441817..442024,443390..443618,444599..444732,445515..445607)
location: region:429341-445607:1
so has part: feature:429341-429410:1:exon
so has part: feature:429789-429953:1:exon
so has part: feature:430253-430416:1:exon
so has part: feature:430511-430612:1:exon
so has part: feature:431113-431208:1:exon
so has part: feature:431290-431385:1:exon
so has part: feature:432805-432943:1:exon
so has part: feature:433909-434129:1:exon
so has part: feature:437663-437783:1:exon
so has part: feature:439179-439438:1:exon
so has part: feature:439879-440244:1:exon
so has part: feature:440704-440831:1:exon
so has part: feature:441817-442024:1:exon
so has part: feature:443390-443618:1:exon
so has part: feature:444599-444732:1:exon
so has part: feature:445515-445607:1:exon

XP_025333472.1
type: Protein
SIO_000068: ncbiprotein

position:429341:1
position: 429341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445607:1
position: 445607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429341-429410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429789-429953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430253-430416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430511-430612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431113-431208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431290-431385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432805-432943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:433909-434129:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437663-437783:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439179-439438:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439879-440244:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440704-440831:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441817-442024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:443390-443618:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:444599-444732:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:445515-445607:1:exon

UBE2V2
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: UBE2V2
note: ubiquitin conjugating enzyme E2 V2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 492506..543898
location: region:492506-543898:1
so has part: feature:492506-543898:1:exon
subclass of: SO_0000010

112678420
type: Gene
SIO_000068: ncbigene

position:492506:1
position: 492506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543898:1
position: 543898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492506-543898:1:exon

UBE2V2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: UBE2V2
product: ubiquitin conjugating enzyme E2 V2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477689.3
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(492506..492616,524400..524548,529628..529753,541588..543898)
location: region:492506-543898:1
so has part: feature:492506-492616:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:529628-529753:1:exon
so has part: feature:541588-543898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492506-492616:1:exon

position:492616:1
position: 492616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:524400-524548:1:exon

position:524400:1
position: 524400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524548:1
position: 524548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529628-529753:1:exon

position:529628:1
position: 529628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529753:1
position: 529753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541588-543898:1:exon

position:541588:1
position: 541588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2V2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: UBE2V2
product: ubiquitin conjugating enzyme E2 V2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103960.1
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(492531..492616,498435..500335,524400..524548,541588..543898)
location: region:492531-543898:1
so has part: feature:492531-492616:1:exon
so has part: feature:498435-500335:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:541588-543898:1:exon

position:492531:1
position: 492531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492531-492616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498435-500335:1:exon

position:498435:1
position: 498435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500335:1
position: 500335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541588-543898:1:exon

UBE2V2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: UBE2V2
product: ubiquitin conjugating enzyme E2 V2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, 1 Protein
transcript id: XR_004810578.2
SIO_010081: UBE2V2
so part of: UBE2V2
location: join(492531..492616,498435..500335,524400..524548,524859..524986,529628..529753,541588..541599)
location: region:492531-541599:1
so has part: feature:492531-492616:1:exon
so has part: feature:498435-500335:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:524859-524986:1:exon
so has part: feature:529628-529753:1:exon
so has part: feature:541588-541599:1:exon

position:541599:1
position: 541599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492531-492616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498435-500335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524859-524986:1:exon

position:524859:1
position: 524859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524986:1
position: 524986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529628-529753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:541588-541599:1:exon

UBE2V2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: UBE2V2
product: ubiquitin conjugating enzyme E2 V2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 long SRA reads, 1 Protein
transcript id: XR_007407168.1
SIO_010081: UBE2V2
so part of: UBE2V2
location: join(492531..492616,498435..500335,524400..524548,524859..524986,528390..529621)
location: region:492531-529621:1
so has part: feature:492531-492616:1:exon
so has part: feature:498435-500335:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:524859-524986:1:exon
so has part: feature:528390-529621:1:exon

position:529621:1
position: 529621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492531-492616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498435-500335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524859-524986:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528390-529621:1:exon

position:528390:1
position: 528390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2V2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: UBE2V2
product: ubiquitin conjugating enzyme E2 V2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 1 Protein
transcript id: XM_035708479.2
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(492532..492616,498435..500335,524400..524548,529628..529753,536583..536627,541588..541725)
location: region:492532-541725:1
so has part: feature:492532-492616:1:exon
so has part: feature:498435-500335:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:529628-529753:1:exon
so has part: feature:536583-536627:1:exon
so has part: feature:541588-541725:1:exon

position:492532:1
position: 492532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541725:1
position: 541725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492532-492616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498435-500335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529628-529753:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536583-536627:1:exon

position:536583:1
position: 536583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536627:1
position: 536627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:541588-541725:1:exon

UBE2V2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: UBE2V2
product: ubiquitin conjugating enzyme E2 V2, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708482.2
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(492580..492616,524400..524548,541588..543898)
location: region:492580-543898:1
so has part: feature:492580-492616:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:541588-543898:1:exon

position:492580:1
position: 492580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492580-492616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541588-543898:1:exon

UBE2V2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: UBE2V2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 2 isoform X4
translation: MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(492601..492616,524400..524548,529628..529753,541588..541734)
location: region:492601-541734:1
so has part: feature:492601-492616:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:529628-529753:1:exon
so has part: feature:541588-541734:1:exon

XP_025333474.1
type: Protein
SIO_000068: ncbiprotein

position:492601:1
position: 492601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541734:1
position: 541734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492601-492616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529628-529753:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541588-541734:1:exon

UBE2V2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: UBE2V2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 2 isoform X5
translation: MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(492601..492616,524400..524548,541588..541734)
location: region:492601-541734:1
so has part: feature:492601-492616:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:541588-541734:1:exon

XP_035564375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492601-492616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541588-541734:1:exon

UBE2V2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: UBE2V2
product: ubiquitin conjugating enzyme E2 V2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708478.2
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(499638..500335,524400..524548,529628..529753,541588..543898)
location: region:499638-543898:1
so has part: feature:499638-500335:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:529628-529753:1:exon
so has part: feature:541588-543898:1:exon

position:499638:1
position: 499638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499638-500335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529628-529753:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541588-543898:1:exon

UBE2V2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: UBE2V2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 2 isoform X1
translation: MREREAETQAEEEAGSMQGARRGTRSRVSRITPWAAGGTKPLCHWGCPDLEHLILTPLSPILALTYFSSLGASGQDGVCSSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(500092..500335,524400..524548,529628..529753,541588..541734)
location: region:500092-541734:1
so has part: feature:500092-500335:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:529628-529753:1:exon
so has part: feature:541588-541734:1:exon

XP_035564371.2
type: Protein
SIO_000068: ncbiprotein

position:500092:1
position: 500092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500092-500335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529628-529753:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541588-541734:1:exon

UBE2V2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: UBE2V2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 2 isoform X3
translation: MREREAETQAEEEAGSMQGARRGTRSRVSRITPWAAGGTKPLCHWGCPDLEHLILTPLSPILALTYFSSLGASGQDGVCSSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(500092..500335,524400..524548,541588..541734)
location: region:500092-541734:1
so has part: feature:500092-500335:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:541588-541734:1:exon

XP_048959917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500092-500335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541588-541734:1:exon

UBE2V2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: UBE2V2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 2 isoform X2
translation: MREREAETQAEEEAGSMQGARRGTRSRVSRITPWAAGGTKPLCHWGCPDLEHLILTPLSPILALTYFSSLGASGQDGVCSSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMRHFILLKSSRMMC
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(500092..500335,524400..524548,529628..529753,536583..536624)
location: region:500092-536624:1
so has part: feature:500092-500335:1:exon
so has part: feature:524400-524548:1:exon
so has part: feature:529628-529753:1:exon
so has part: feature:536583-536624:1:exon

XP_035564372.2
type: Protein
SIO_000068: ncbiprotein

position:536624:1
position: 536624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500092-500335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524400-524548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529628-529753:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536583-536624:1:exon

LOC112678421
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678421
note: cytochrome c oxidase subunit 7B, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(506203..506588)
location: region:506203-506588:-1
so has part: feature:506203-506588:-1:exon
subclass of: SO_0000010

112678421
type: Gene
SIO_000068: ncbigene

position:506203:-1
position: 506203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506588:-1
position: 506588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506203-506588:-1:exon

LOC112678421
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: LOC112678421
product: cytochrome c oxidase subunit 7B, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_035708483.2
SIO_010081: LOC112678421
subclass of: SO_0000673
so part of: LOC112678421
location: complement(506203..506588)
location: region:506203-506588:-1
so has part: feature:506203-506588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506203-506588:-1:exon

LOC112678421
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: LOC112678421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 7B, mitochondrial-like
translation: MFPMARIALSHLGVQSIPQTMARQSHQKWAPDFHDKYGNAVLASGATFCIAVWAYTAAQIGIEWNLSPVGRVTPKEWRDQ
SIO_010081: LOC112678421
subclass of: SO_0000673
so part of: LOC112678421
location: complement(506317..506559)
location: region:506317-506559:-1
so has part: feature:506317-506559:-1:exon

XP_035564376.1
type: Protein
SIO_000068: ncbiprotein

position:506317:-1
position: 506317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506559:-1
position: 506559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506317-506559:-1:exon

LOC112678347
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678347
note: bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(618477..623065)
location: region:618477-623065:-1
so has part: feature:618477-623065:-1:exon

112678347
type: Gene
SIO_000068: ncbigene

position:618477:-1
position: 618477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623065:-1
position: 623065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618477-623065:-1:exon

LOC112678347
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678347
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC112678347
subclass of: SO_0000673
so part of: LOC112678347
location: complement(618477..619411)
location: region:618477-619411:-1
so has part: feature:618477-619411:-1:exon

position:619411:-1
position: 619411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618477-619411:-1:exon

LOC112678347
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678347
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC112678347
subclass of: SO_0000673
so part of: LOC112678347
location: complement(623045..623065)
location: region:623045-623065:-1
so has part: feature:623045-623065:-1:exon

position:623045:-1
position: 623045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623045-623065:-1:exon

LOC118352808
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC118352808
note: uncharacterized LOC118352808; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 769212..773309
location: region:769212-773309:1
so has part: feature:769212-773309:1:exon
subclass of: SO_0000011

118352808
type: Gene
SIO_000068: ncbigene

position:769212:1
position: 769212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773309:1
position: 773309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769212-773309:1:exon

LOC118352808
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC118352808
product: uncharacterized LOC118352808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004810580.2
SIO_010081: LOC118352808
subclass of: SO_0000673
so part of: LOC118352808
location: join(769212..769303,770812..770897,773178..773309)
location: region:769212-773309:1
so has part: feature:769212-769303:1:exon
so has part: feature:770812-770897:1:exon
so has part: feature:773178-773309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769212-769303:1:exon

position:769303:1
position: 769303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770812-770897:1:exon

position:770812:1
position: 770812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770897:1
position: 770897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:773178-773309:1:exon

position:773178:1
position: 773178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112678422
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678422
note: uncharacterized LOC112678422; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(818273..828332)
location: region:818273-828332:-1
so has part: feature:818273-828332:-1:exon
subclass of: SO_0000011

112678422
type: Gene
SIO_000068: ncbigene

position:818273:-1
position: 818273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828332:-1
position: 828332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818273-828332:-1:exon

LOC112678422
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC112678422
product: uncharacterized LOC112678422, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004810581.2
SIO_010081: LOC112678422
subclass of: SO_0000673
so part of: LOC112678422
location: complement(join(818273..820148,820670..820815,827658..827823,827992..828332))
location: region:818273-828332:-1
so has part: feature:827992-828332:-1:exon
so has part: feature:827658-827823:-1:exon
so has part: feature:820670-820815:-1:exon
so has part: feature:818273-820148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:827992-828332:-1:exon

position:827992:-1
position: 827992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:827658-827823:-1:exon

position:827658:-1
position: 827658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827823:-1
position: 827823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:820670-820815:-1:exon

position:820670:-1
position: 820670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820815:-1
position: 820815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:818273-820148:-1:exon

position:820148:-1
position: 820148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112678422
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC112678422
product: uncharacterized LOC112678422, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_003147566.3
SIO_010081: LOC112678422
subclass of: SO_0000673
so part of: LOC112678422
location: complement(join(818273..820148,820670..820815,827658..828332))
location: region:818273-828332:-1
so has part: feature:827658-828332:-1:exon
so has part: feature:820670-820815:-1:exon
so has part: feature:818273-820148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:827658-828332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820670-820815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:818273-820148:-1:exon

LOC125753963
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC125753963
note: uncharacterized LOC125753963; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 949089..951340
location: region:949089-951340:1
so has part: feature:949089-951340:1:exon
subclass of: SO_0000010

125753963
type: Gene
SIO_000068: ncbigene

position:949089:1
position: 949089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951340:1
position: 951340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949089-951340:1:exon

LOC125753963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: LOC125753963
product: uncharacterized LOC125753963
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103732.1
SIO_010081: LOC125753963
subclass of: SO_0000673
so part of: LOC125753963
location: join(949089..949320,949716..950208,950370..951340)
location: region:949089-951340:1
so has part: feature:949089-949320:1:exon
so has part: feature:949716-950208:1:exon
so has part: feature:950370-951340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949089-949320:1:exon

position:949320:1
position: 949320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:949716-950208:1:exon

position:949716:1
position: 949716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950208:1
position: 950208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:950370-951340:1:exon

position:950370:1
position: 950370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125753963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: LOC125753963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125753963
translation: MPFARSYKNRSSPTYGPNRDQDHRCPVPPADLARGLARGRGACRPPPHTLGPRSGALQGPGLRARRRPSPRYRARQPGFRASLRLEGRPSRSRRRPPSRGGRLPALRSHRPLPSTHLFPLFQRLNSTVCAPRAPTSPGKGGGAQGWGGGAGRGAQRGRSRAAASPRSRHESHLLLELNHWRVRRGSQVAAACGRWCPVGPVRGASGSLCLGTCSCSRAPDLPPRALRRPHRDRWSVPSPRDRSWRPHPGTGRGDPHPGTGRGALTPGQVVGALTPGQVVASSPRDRSWRPHPGTGRGALTPGQVVAPSPRDRSWRPHPGTGRRRRHHHTLYRGGKAGAAPPGALGLATPQPAWAPESPPVTPLPAHTVSRC
SIO_010081: LOC125753963
subclass of: SO_0000673
so part of: LOC125753963
location: join(949089..949320,949716..950208,950370..950760)
location: region:949089-950760:1
so has part: feature:949089-949320:1:exon
so has part: feature:949716-950208:1:exon
so has part: feature:950370-950760:1:exon

XP_048959689.1
type: Protein
SIO_000068: ncbiprotein

position:950760:1
position: 950760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949089-949320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949716-950208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950370-950760:1:exon

LOC118352810
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC118352810
note: uncharacterized LOC118352810; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1015077..1016588)
location: region:1015077-1016588:-1
so has part: feature:1015077-1016588:-1:exon
subclass of: SO_0000011

118352810
type: Gene
SIO_000068: ncbigene

position:1015077:-1
position: 1015077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016588:-1
position: 1016588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1015077-1016588:-1:exon

LOC118352810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC118352810
product: uncharacterized LOC118352810
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004810583.2
SIO_010081: LOC118352810
subclass of: SO_0000673
so part of: LOC118352810
location: complement(join(1015077..1016318,1016422..1016588))
location: region:1015077-1016588:-1
so has part: feature:1016422-1016588:-1:exon
so has part: feature:1015077-1016318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1016422-1016588:-1:exon

position:1016422:-1
position: 1016422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1015077-1016318:-1:exon

position:1016318:-1
position: 1016318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125753969
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC125753969
note: uncharacterized LOC125753969; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1046167..1110653
location: region:1046167-1110653:1
so has part: feature:1046167-1110653:1:exon
subclass of: SO_0000011

125753969
type: Gene
SIO_000068: ncbigene

position:1046167:1
position: 1046167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110653:1
position: 1110653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046167-1110653:1:exon

LOC125753969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125753969
product: uncharacterized LOC125753969, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406988.1
SIO_010081: LOC125753969
subclass of: SO_0000673
so part of: LOC125753969
location: join(1046167..1047229,1105093..1110653)
location: region:1046167-1110653:1
so has part: feature:1046167-1047229:1:exon
so has part: feature:1105093-1110653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1046167-1047229:1:exon

position:1047229:1
position: 1047229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1105093-1110653:1:exon

position:1105093:1
position: 1105093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125753969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125753969
product: uncharacterized LOC125753969, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406996.1
SIO_010081: LOC125753969
subclass of: SO_0000673
so part of: LOC125753969
location: join(1046168..1047229,1049511..1049776,1050134..1050244,1055104..1055258,1057711..1057832,1064968..1065058,1069249..1069379,1105093..1110653)
location: region:1046168-1110653:1
so has part: feature:1046168-1047229:1:exon
so has part: feature:1049511-1049776:1:exon
so has part: feature:1050134-1050244:1:exon
so has part: feature:1055104-1055258:1:exon
so has part: feature:1057711-1057832:1:exon
so has part: feature:1064968-1065058:1:exon
so has part: feature:1069249-1069379:1:exon
so has part: feature:1105093-1110653:1:exon

position:1046168:1
position: 1046168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046168-1047229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049511-1049776:1:exon

position:1049511:1
position: 1049511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049776:1
position: 1049776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1050134-1050244:1:exon

position:1050134:1
position: 1050134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050244:1
position: 1050244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1055104-1055258:1:exon

position:1055104:1
position: 1055104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055258:1
position: 1055258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1057711-1057832:1:exon

position:1057711:1
position: 1057711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057832:1
position: 1057832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1064968-1065058:1:exon

position:1064968:1
position: 1064968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065058:1
position: 1065058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1069249-1069379:1:exon

position:1069249:1
position: 1069249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069379:1
position: 1069379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1105093-1110653:1:exon

LOC125753969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125753969
product: uncharacterized LOC125753969, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406990.1
SIO_010081: LOC125753969
subclass of: SO_0000673
so part of: LOC125753969
location: join(1046169..1047229,1049511..1049776,1050134..1050244,1055104..1055258,1057711..1057832,1064968..1065058,1069225..1069379,1105093..1110653)
location: region:1046169-1110653:1
so has part: feature:1046169-1047229:1:exon
so has part: feature:1049511-1049776:1:exon
so has part: feature:1050134-1050244:1:exon
so has part: feature:1055104-1055258:1:exon
so has part: feature:1057711-1057832:1:exon
so has part: feature:1064968-1065058:1:exon
so has part: feature:1069225-1069379:1:exon
so has part: feature:1105093-1110653:1:exon

position:1046169:1
position: 1046169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046169-1047229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049511-1049776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1050134-1050244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055104-1055258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1057711-1057832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1064968-1065058:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1069225-1069379:1:exon

position:1069225:1
position: 1069225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1105093-1110653:1:exon

LOC125753969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125753969
product: uncharacterized LOC125753969, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406991.1
SIO_010081: LOC125753969
subclass of: SO_0000673
so part of: LOC125753969
location: join(1046169..1047229,1049511..1049776,1050134..1050244,1055104..1055258,1057711..1057832,1064968..1065058,1105093..1110653)
location: region:1046169-1110653:1
so has part: feature:1046169-1047229:1:exon
so has part: feature:1049511-1049776:1:exon
so has part: feature:1050134-1050244:1:exon
so has part: feature:1055104-1055258:1:exon
so has part: feature:1057711-1057832:1:exon
so has part: feature:1064968-1065058:1:exon
so has part: feature:1105093-1110653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1046169-1047229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049511-1049776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1050134-1050244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055104-1055258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1057711-1057832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1064968-1065058:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1105093-1110653:1:exon

LOC125753969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125753969
product: uncharacterized LOC125753969, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406992.1
SIO_010081: LOC125753969
subclass of: SO_0000673
so part of: LOC125753969
location: join(1046170..1047229,1049511..1049776,1050134..1050244,1055104..1055258,1064968..1065058,1105093..1110653)
location: region:1046170-1110653:1
so has part: feature:1046170-1047229:1:exon
so has part: feature:1049511-1049776:1:exon
so has part: feature:1050134-1050244:1:exon
so has part: feature:1055104-1055258:1:exon
so has part: feature:1064968-1065058:1:exon
so has part: feature:1105093-1110653:1:exon

position:1046170:1
position: 1046170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046170-1047229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049511-1049776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1050134-1050244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055104-1055258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064968-1065058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1105093-1110653:1:exon

LOC125753969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125753969
product: uncharacterized LOC125753969, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406993.1
SIO_010081: LOC125753969
subclass of: SO_0000673
so part of: LOC125753969
location: join(1046170..1047229,1049511..1049776,1050134..1050244,1064968..1065058,1069225..1069379,1105093..1110653)
location: region:1046170-1110653:1
so has part: feature:1046170-1047229:1:exon
so has part: feature:1049511-1049776:1:exon
so has part: feature:1050134-1050244:1:exon
so has part: feature:1064968-1065058:1:exon
so has part: feature:1069225-1069379:1:exon
so has part: feature:1105093-1110653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1046170-1047229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049511-1049776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1050134-1050244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1064968-1065058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069225-1069379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1105093-1110653:1:exon

LOC125753969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125753969
product: uncharacterized LOC125753969, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406989.1
SIO_010081: LOC125753969
subclass of: SO_0000673
so part of: LOC125753969
location: join(1046170..1047229,1049511..1049776,1050134..1050244,1064968..1065058,1105093..1110653)
location: region:1046170-1110653:1
so has part: feature:1046170-1047229:1:exon
so has part: feature:1049511-1049776:1:exon
so has part: feature:1050134-1050244:1:exon
so has part: feature:1064968-1065058:1:exon
so has part: feature:1105093-1110653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1046170-1047229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049511-1049776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1050134-1050244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1064968-1065058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105093-1110653:1:exon

LOC125753969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125753969
product: uncharacterized LOC125753969, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406994.1
SIO_010081: LOC125753969
subclass of: SO_0000673
so part of: LOC125753969
location: join(1046171..1047229,1050134..1050244,1064968..1065058,1105093..1110653)
location: region:1046171-1110653:1
so has part: feature:1046171-1047229:1:exon
so has part: feature:1050134-1050244:1:exon
so has part: feature:1064968-1065058:1:exon
so has part: feature:1105093-1110653:1:exon

position:1046171:1
position: 1046171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046171-1047229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1050134-1050244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064968-1065058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105093-1110653:1:exon

LOC125753969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125753969
product: uncharacterized LOC125753969, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406995.1
SIO_010081: LOC125753969
subclass of: SO_0000673
so part of: LOC125753969
location: join(1046172..1047229,1064968..1065058,1105093..1110653)
location: region:1046172-1110653:1
so has part: feature:1046172-1047229:1:exon
so has part: feature:1064968-1065058:1:exon
so has part: feature:1105093-1110653:1:exon

position:1046172:1
position: 1046172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046172-1047229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064968-1065058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1105093-1110653:1:exon

CLXN
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: CLXN
note: calaxin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1130225..1152792)
location: region:1130225-1152792:-1
so has part: feature:1130225-1152792:-1:exon
subclass of: SO_0000010

112678424
type: Gene
SIO_000068: ncbigene

position:1130225:-1
position: 1130225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152792:-1
position: 1152792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130225-1152792:-1:exon

CLXN
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004810418.2
SIO_010081: CLXN
so part of: CLXN
location: complement(join(1130225..1130355,1130443..1130551,1133392..1133474,1144193..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1130225-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144193-1144278:-1:exon
so has part: feature:1133392-1133474:-1:exon
so has part: feature:1130443-1130551:-1:exon
so has part: feature:1130225-1130355:-1:exon

position:1152791:-1
position: 1152791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

position:1152667:-1
position: 1152667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

position:1148948:-1
position: 1148948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149106:-1
position: 1149106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

position:1147925:-1
position: 1147925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148029:-1
position: 1148029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

position:1147086:-1
position: 1147086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147237:-1
position: 1147237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

position:1146706:-1
position: 1146706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146810:-1
position: 1146810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1144193-1144278:-1:exon

position:1144193:-1
position: 1144193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144278:-1
position: 1144278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1133392-1133474:-1:exon

position:1133392:-1
position: 1133392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133474:-1
position: 1133474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1130443-1130551:-1:exon

position:1130443:-1
position: 1130443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130551:-1
position: 1130551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1130225-1130355:-1:exon

position:1130355:-1
position: 1130355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLXN
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406998.1
SIO_010081: CLXN
so part of: CLXN
location: complement(join(1130225..1130355,1138833..1138970,1144193..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1130225-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144193-1144278:-1:exon
so has part: feature:1138833-1138970:-1:exon
so has part: feature:1130225-1130355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144193-1144278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138833-1138970:-1:exon

position:1138833:-1
position: 1138833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138970:-1
position: 1138970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1130225-1130355:-1:exon

CLXN
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406997.1
SIO_010081: CLXN
so part of: CLXN
location: complement(join(1130225..1130369,1138833..1138970,1144193..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1130225-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144193-1144278:-1:exon
so has part: feature:1138833-1138970:-1:exon
so has part: feature:1130225-1130369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144193-1144278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138833-1138970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130225-1130369:-1:exon

position:1130369:-1
position: 1130369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLXN
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004810417.2
SIO_010081: CLXN
so part of: CLXN
location: complement(join(1130225..1130355,1130443..1130551,1133392..1133474,1138833..1138970,1144193..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1130225-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144193-1144278:-1:exon
so has part: feature:1138833-1138970:-1:exon
so has part: feature:1133392-1133474:-1:exon
so has part: feature:1130443-1130551:-1:exon
so has part: feature:1130225-1130355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144193-1144278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138833-1138970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1133392-1133474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130443-1130551:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130225-1130355:-1:exon

CLXN
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004810415.2
SIO_010081: CLXN
so part of: CLXN
location: complement(join(1130225..1130355,1130443..1130551,1133392..1133474,1136759..1136889,1138833..1138970,1144193..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1130225-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144193-1144278:-1:exon
so has part: feature:1138833-1138970:-1:exon
so has part: feature:1136759-1136889:-1:exon
so has part: feature:1133392-1133474:-1:exon
so has part: feature:1130443-1130551:-1:exon
so has part: feature:1130225-1130355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144193-1144278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138833-1138970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1136759-1136889:-1:exon

position:1136759:-1
position: 1136759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136889:-1
position: 1136889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1133392-1133474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130443-1130551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1130225-1130355:-1:exon

CLXN
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004810416.2
SIO_010081: CLXN
so part of: CLXN
location: complement(join(1130225..1130355,1130443..1130551,1136759..1136903,1138833..1138970,1144193..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1130225-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144193-1144278:-1:exon
so has part: feature:1138833-1138970:-1:exon
so has part: feature:1136759-1136903:-1:exon
so has part: feature:1130443-1130551:-1:exon
so has part: feature:1130225-1130355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144193-1144278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138833-1138970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1136759-1136903:-1:exon

position:1136903:-1
position: 1136903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1130443-1130551:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130225-1130355:-1:exon

CLXN
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004810414.2
SIO_010081: CLXN
so part of: CLXN
location: complement(join(1130225..1130355,1130443..1130551,1133392..1133474,1136759..1136903,1138833..1138970,1144193..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1130225-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144193-1144278:-1:exon
so has part: feature:1138833-1138970:-1:exon
so has part: feature:1136759-1136903:-1:exon
so has part: feature:1133392-1133474:-1:exon
so has part: feature:1130443-1130551:-1:exon
so has part: feature:1130225-1130355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144193-1144278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138833-1138970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1136759-1136903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1133392-1133474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130443-1130551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1130225-1130355:-1:exon

CLXN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103762.1
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1138375..1138970,1144193..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1138375-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144193-1144278:-1:exon
so has part: feature:1138375-1138970:-1:exon

position:1138375:-1
position: 1138375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144193-1144278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138375-1138970:-1:exon

CLXN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477694.3
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1142709..1144278,1146706..1146810,1147086..1147237,1148948..1149106,1152667..1152792))
location: region:1142709-1152792:-1
so has part: feature:1152667-1152792:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1142709-1144278:-1:exon

position:1142709:-1
position: 1142709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1142709-1144278:-1:exon

CLXN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477692.3
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1142709..1142984,1144193..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1142709-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144193-1144278:-1:exon
so has part: feature:1142709-1142984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144193-1144278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1142709-1142984:-1:exon

position:1142984:-1
position: 1142984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLXN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477695.3
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1142709..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152791))
location: region:1142709-1152791:-1
so has part: feature:1152667-1152791:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1142709-1144278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1142709-1144278:-1:exon

CLXN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: CLXN
product: calaxin, transcript variant X12
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477693.3
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1142709..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152134..1152277))
location: region:1142709-1152277:-1
so has part: feature:1152134-1152277:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1142709-1144278:-1:exon

position:1152277:-1
position: 1152277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152134-1152277:-1:exon

position:1152134:-1
position: 1152134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1142709-1144278:-1:exon

CLXN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: CLXN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calaxin isoform X2
translation: MNRKKLQKLTDTLTKNCKNFNKFEVKCLIDLFYNLMGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRDCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1144219..1144278,1146706..1146810,1147086..1147237,1148948..1149106,1152667..1152724))
location: region:1144219-1152724:-1
so has part: feature:1152667-1152724:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144219-1144278:-1:exon

XP_025333479.1
type: Protein
SIO_000068: ncbiprotein

position:1144219:-1
position: 1144219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152724:-1
position: 1152724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144219-1144278:-1:exon

CLXN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: CLXN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calaxin isoform X1
translation: MNRKKLQKLTDTLTKNCKNFNKFEVKCLIDLFYNLMGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRVFRGFDEDNDGYVNVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1144219..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152724))
location: region:1144219-1152724:-1
so has part: feature:1152667-1152724:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144219-1144278:-1:exon

XP_025333477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144219-1144278:-1:exon

CLXN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: CLXN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calaxin isoform X1
translation: MNRKKLQKLTDTLTKNCKNFNKFEVKCLIDLFYNLMGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRVFRGFDEDNDGYVNVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1144219..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152724))
location: region:1144219-1152724:-1
so has part: feature:1152667-1152724:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144219-1144278:-1:exon

XP_025333480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144219-1144278:-1:exon

CLXN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: CLXN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calaxin isoform X1
translation: MNRKKLQKLTDTLTKNCKNFNKFEVKCLIDLFYNLMGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRVFRGFDEDNDGYVNVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1144219..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149106,1152667..1152724))
location: region:1144219-1152724:-1
so has part: feature:1152667-1152724:-1:exon
so has part: feature:1148948-1149106:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144219-1144278:-1:exon

XP_048959719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152667-1152724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148948-1149106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144219-1144278:-1:exon

CLXN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: CLXN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calaxin isoform X3
translation: MGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRVFRGFDEDNDGYVNVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: CLXN
subclass of: SO_0000673
so part of: CLXN
location: complement(join(1144219..1144278,1146706..1146810,1147086..1147237,1147925..1148029,1148948..1149059))
location: region:1144219-1149059:-1
so has part: feature:1148948-1149059:-1:exon
so has part: feature:1147925-1148029:-1:exon
so has part: feature:1147086-1147237:-1:exon
so has part: feature:1146706-1146810:-1:exon
so has part: feature:1144219-1144278:-1:exon

XP_025333478.1
type: Protein
SIO_000068: ncbiprotein

position:1149059:-1
position: 1149059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1148948-1149059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1147925-1148029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147086-1147237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146706-1146810:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144219-1144278:-1:exon

LOC112678426
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678426
note: uncharacterized LOC112678426; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1151873..1177274
location: region:1151873-1177274:1
so has part: feature:1151873-1177274:1:exon
subclass of: SO_0000011

112678426
type: Gene
SIO_000068: ncbigene

position:1151873:1
position: 1151873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177274:1
position: 1177274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151873-1177274:1:exon

LOC112678426
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC112678426
product: uncharacterized LOC112678426, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_003147573.3
SIO_010081: LOC112678426
subclass of: SO_0000673
so part of: LOC112678426
location: join(1151873..1152297,1164715..1164820,1176076..1177274)
location: region:1151873-1177274:1
so has part: feature:1151873-1152297:1:exon
so has part: feature:1164715-1164820:1:exon
so has part: feature:1176076-1177274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1151873-1152297:1:exon

position:1152297:1
position: 1152297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164715-1164820:1:exon

position:1164715:1
position: 1164715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164820:1
position: 1164820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1176076-1177274:1:exon

position:1176076:1
position: 1176076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112678426
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC112678426
product: uncharacterized LOC112678426, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_003147575.3
SIO_010081: LOC112678426
subclass of: SO_0000673
so part of: LOC112678426
location: join(1152372..1152507,1164715..1164820,1176076..1177274)
location: region:1152372-1177274:1
so has part: feature:1152372-1152507:1:exon
so has part: feature:1164715-1164820:1:exon
so has part: feature:1176076-1177274:1:exon

position:1152372:1
position: 1152372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152372-1152507:1:exon

position:1152507:1
position: 1152507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164715-1164820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176076-1177274:1:exon

LOC112678426
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC112678426
product: uncharacterized LOC112678426, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007406999.1
SIO_010081: LOC112678426
subclass of: SO_0000673
so part of: LOC112678426
location: join(1152372..1152507,1164715..1164820,1176076..1176238,1176675..1177274)
location: region:1152372-1177274:1
so has part: feature:1152372-1152507:1:exon
so has part: feature:1164715-1164820:1:exon
so has part: feature:1176076-1176238:1:exon
so has part: feature:1176675-1177274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152372-1152507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164715-1164820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176076-1176238:1:exon

position:1176238:1
position: 1176238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1176675-1177274:1:exon

position:1176675:1
position: 1176675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112678426
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC112678426
product: uncharacterized LOC112678426, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007407000.1
SIO_010081: LOC112678426
subclass of: SO_0000673
so part of: LOC112678426
location: join(1152915..1153134,1164715..1164820,1176076..1177274)
location: region:1152915-1177274:1
so has part: feature:1152915-1153134:1:exon
so has part: feature:1164715-1164820:1:exon
so has part: feature:1176076-1177274:1:exon

position:1152915:1
position: 1152915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152915-1153134:1:exon

position:1153134:1
position: 1153134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164715-1164820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176076-1177274:1:exon

LOC112678349
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678349
note: negative elongation factor E-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1323491..1325908)
location: region:1323491-1325908:-1
so has part: feature:1323491-1325908:-1:exon

112678349
type: Gene
SIO_000068: ncbigene

position:1323491:-1
position: 1323491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325908:-1
position: 1325908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1323491-1325908:-1:exon

LOC112678349
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678349
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC112678349
subclass of: SO_0000673
so part of: LOC112678349
location: complement(1323491..1324326)
location: region:1323491-1324326:-1
so has part: feature:1323491-1324326:-1:exon

position:1324326:-1
position: 1324326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1323491-1324326:-1:exon

LOC112678349
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678349
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC112678349
subclass of: SO_0000673
so part of: LOC112678349
location: complement(1325816..1325908)
location: region:1325816-1325908:-1
so has part: feature:1325816-1325908:-1:exon

position:1325816:-1
position: 1325816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325816-1325908:-1:exon

SNAI2
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: SNAI2
note: snail family transcriptional repressor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1341524..1345258)
location: region:1341524-1345258:-1
so has part: feature:1341524-1345258:-1:exon
subclass of: SO_0000010

112678427
type: Gene
SIO_000068: ncbigene

position:1341524:-1
position: 1341524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345258:-1
position: 1345258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341524-1345258:-1:exon

SNAI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: SNAI2
product: snail family transcriptional repressor 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477696.3
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1341524..1342784,1343685..1344230,1345027..1345258))
location: region:1341524-1345258:-1
so has part: feature:1345027-1345258:-1:exon
so has part: feature:1343685-1344230:-1:exon
so has part: feature:1341524-1342784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1345027-1345258:-1:exon

position:1345027:-1
position: 1345027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1343685-1344230:-1:exon

position:1343685:-1
position: 1343685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344230:-1
position: 1344230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1341524-1342784:-1:exon

position:1342784:-1
position: 1342784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNAI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: SNAI2
product: snail family transcriptional repressor 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708383.2
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1341524..1342784,1343685..1344230,1344835..1345003))
location: region:1341524-1345003:-1
so has part: feature:1344835-1345003:-1:exon
so has part: feature:1343685-1344230:-1:exon
so has part: feature:1341524-1342784:-1:exon

position:1345003:-1
position: 1345003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344835-1345003:-1:exon

position:1344835:-1
position: 1344835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1343685-1344230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1341524-1342784:-1:exon

SNAI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: SNAI2
product: snail family transcriptional repressor 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708381.2
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1341524..1342784,1343685..1344230,1344707..1344840))
location: region:1341524-1344840:-1
so has part: feature:1344707-1344840:-1:exon
so has part: feature:1343685-1344230:-1:exon
so has part: feature:1341524-1342784:-1:exon

position:1344840:-1
position: 1344840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344707-1344840:-1:exon

position:1344707:-1
position: 1344707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1343685-1344230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1341524-1342784:-1:exon

SNAI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: SNAI2
product: snail family transcriptional repressor 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708382.2
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1341524..1342784,1343685..1344230,1344680..1344819))
location: region:1341524-1344819:-1
so has part: feature:1344680-1344819:-1:exon
so has part: feature:1343685-1344230:-1:exon
so has part: feature:1341524-1342784:-1:exon

position:1344819:-1
position: 1344819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344680-1344819:-1:exon

position:1344680:-1
position: 1344680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1343685-1344230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1341524-1342784:-1:exon

SNAI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: SNAI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein SNAI2 isoform X1
translation: MPRSFLVKKHFNASKKPNYGELDTHTVIISPYLYESYPMPVIPQPEILSSGAYSPITVWTTAAPFHSPLPNGLSSLSGYPSSLGRVSPPPPSDTSSKDHSGSESPISDEEERLQSKLSDPHAIEAEKFQCNLCNKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGCCVAH
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1342603..1342784,1343685..1344230,1345027..1345105))
location: region:1342603-1345105:-1
so has part: feature:1345027-1345105:-1:exon
so has part: feature:1343685-1344230:-1:exon
so has part: feature:1342603-1342784:-1:exon

XP_025333481.1
type: Protein
SIO_000068: ncbiprotein

position:1342603:-1
position: 1342603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345105:-1
position: 1345105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1345027-1345105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1343685-1344230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1342603-1342784:-1:exon

SNAI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: SNAI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein SNAI2 isoform X2
translation: MSGTTLIISPYLYESYPMPVIPQPEILSSGAYSPITVWTTAAPFHSPLPNGLSSLSGYPSSLGRVSPPPPSDTSSKDHSGSESPISDEEERLQSKLSDPHAIEAEKFQCNLCNKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGCCVAH
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1342603..1342784,1343685..1344230,1344707..1344722))
location: region:1342603-1344722:-1
so has part: feature:1344707-1344722:-1:exon
so has part: feature:1343685-1344230:-1:exon
so has part: feature:1342603-1342784:-1:exon

XP_035564274.1
type: Protein
SIO_000068: ncbiprotein

position:1344722:-1
position: 1344722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344707-1344722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1343685-1344230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1342603-1342784:-1:exon

SNAI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: SNAI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein SNAI2 isoform X3
translation: MPVIPQPEILSSGAYSPITVWTTAAPFHSPLPNGLSSLSGYPSSLGRVSPPPPSDTSSKDHSGSESPISDEEERLQSKLSDPHAIEAEKFQCNLCNKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGCCVAH
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1342603..1342784,1343685..1344195))
location: region:1342603-1344195:-1
so has part: feature:1343685-1344195:-1:exon
so has part: feature:1342603-1342784:-1:exon

XP_035564275.1
type: Protein
SIO_000068: ncbiprotein

position:1344195:-1
position: 1344195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343685-1344195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1342603-1342784:-1:exon

SNAI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: SNAI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein SNAI2 isoform X3
translation: MPVIPQPEILSSGAYSPITVWTTAAPFHSPLPNGLSSLSGYPSSLGRVSPPPPSDTSSKDHSGSESPISDEEERLQSKLSDPHAIEAEKFQCNLCNKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGCCVAH
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1342603..1342784,1343685..1344195))
location: region:1342603-1344195:-1
so has part: feature:1343685-1344195:-1:exon
so has part: feature:1342603-1342784:-1:exon

XP_035564276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1343685-1344195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1342603-1342784:-1:exon

LOC112678384
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678384
note: phosphoglycerate mutase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1381306..1382049)
location: region:1381306-1382049:-1
so has part: feature:1381306-1382049:-1:exon

112678384
type: Gene
SIO_000068: ncbigene

position:1381306:-1
position: 1381306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382049:-1
position: 1382049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381306-1382049:-1:exon

LOC112678384
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678384
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC112678384
subclass of: SO_0000673
so part of: LOC112678384
location: complement(1381306..1382049)
location: region:1381306-1382049:-1
so has part: feature:1381306-1382049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1381306-1382049:-1:exon

PPDPFL
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: PPDPFL
note: pancreatic progenitor cell differentiation and proliferation factor like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1500342..1505843
location: region:1500342-1505843:1
so has part: feature:1500342-1505843:1:exon
subclass of: SO_0000010

112678428
type: Gene
SIO_000068: ncbigene

position:1500342:1
position: 1500342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505843:1
position: 1505843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500342-1505843:1:exon

PPDPFL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007407128.1
SIO_010081: PPDPFL
so part of: PPDPFL
location: join(1500342..1501383,1501694..1505843)
location: region:1500342-1505843:1
so has part: feature:1500342-1501383:1:exon
so has part: feature:1501694-1505843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1500342-1501383:1:exon

position:1501383:1
position: 1501383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1501694-1505843:1:exon

position:1501694:1
position: 1501694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPDPFL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007407133.1
SIO_010081: PPDPFL
so part of: PPDPFL
location: join(1500342..1501383,1502435..1505843)
location: region:1500342-1505843:1
so has part: feature:1500342-1501383:1:exon
so has part: feature:1502435-1505843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1500342-1501383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1502435-1505843:1:exon

position:1502435:1
position: 1502435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPDPFL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007407132.1
SIO_010081: PPDPFL
so part of: PPDPFL
location: join(1500342..1500869,1501694..1505843)
location: region:1500342-1505843:1
so has part: feature:1500342-1500869:1:exon
so has part: feature:1501694-1505843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1500342-1500869:1:exon

position:1500869:1
position: 1500869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1501694-1505843:1:exon

PPDPFL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007407134.1
SIO_010081: PPDPFL
so part of: PPDPFL
location: join(1500347..1501383,1501694..1501807,1503062..1505843)
location: region:1500347-1505843:1
so has part: feature:1500347-1501383:1:exon
so has part: feature:1501694-1501807:1:exon
so has part: feature:1503062-1505843:1:exon

position:1500347:1
position: 1500347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500347-1501383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501694-1501807:1:exon

position:1501807:1
position: 1501807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1503062-1505843:1:exon

position:1503062:1
position: 1503062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPDPFL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007407135.1
SIO_010081: PPDPFL
so part of: PPDPFL
location: join(1500348..1500869,1501280..1501383,1502435..1505843)
location: region:1500348-1505843:1
so has part: feature:1500348-1500869:1:exon
so has part: feature:1501280-1501383:1:exon
so has part: feature:1502435-1505843:1:exon

position:1500348:1
position: 1500348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500348-1500869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501280-1501383:1:exon

position:1501280:1
position: 1501280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1502435-1505843:1:exon

PPDPFL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007407130.1
SIO_010081: PPDPFL
so part of: PPDPFL
location: join(1500349..1500869,1501280..1501383,1501694..1505843)
location: region:1500349-1505843:1
so has part: feature:1500349-1500869:1:exon
so has part: feature:1501280-1501383:1:exon
so has part: feature:1501694-1505843:1:exon

position:1500349:1
position: 1500349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500349-1500869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501280-1501383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1501694-1505843:1:exon

PPDPFL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007407131.1
SIO_010081: PPDPFL
so part of: PPDPFL
location: join(1500355..1500869,1501280..1504347,1504802..1505843)
location: region:1500355-1505843:1
so has part: feature:1500355-1500869:1:exon
so has part: feature:1501280-1504347:1:exon
so has part: feature:1504802-1505843:1:exon

position:1500355:1
position: 1500355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500355-1500869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501280-1504347:1:exon

position:1504347:1
position: 1504347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1504802-1505843:1:exon

position:1504802:1
position: 1504802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPDPFL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477697.3
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1500359..1500869,1501280..1501383,1503062..1503133,1503235..1505843)
location: region:1500359-1505843:1
so has part: feature:1500359-1500869:1:exon
so has part: feature:1501280-1501383:1:exon
so has part: feature:1503062-1503133:1:exon
so has part: feature:1503235-1505843:1:exon

position:1500359:1
position: 1500359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500359-1500869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501280-1501383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1503062-1503133:1:exon

position:1503133:1
position: 1503133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1503235-1505843:1:exon

position:1503235:1
position: 1503235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPDPFL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477698.3
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1500361..1500869,1501280..1501383,1503062..1503133,1503235..1503334,1504802..1505843)
location: region:1500361-1505843:1
so has part: feature:1500361-1500869:1:exon
so has part: feature:1501280-1501383:1:exon
so has part: feature:1503062-1503133:1:exon
so has part: feature:1503235-1503334:1:exon
so has part: feature:1504802-1505843:1:exon

position:1500361:1
position: 1500361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500361-1500869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501280-1501383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1503062-1503133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1503235-1503334:1:exon

position:1503334:1
position: 1503334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1504802-1505843:1:exon

PPDPFL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PPDPFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic progenitor cell differentiation and proliferation factor-like protein isoform X2
translation: MASVPSIGCLLAKNQYYRKTSISSVSSLTDSVNVIPDDKSQQGLLNVAESSWWFKSFFHSEPVPSDVRRKDLSASGVNS
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1501329..1501383,1503062..1503133,1503235..1503334,1504802..1504814)
location: region:1501329-1504814:1
so has part: feature:1501329-1501383:1:exon
so has part: feature:1503062-1503133:1:exon
so has part: feature:1503235-1503334:1:exon
so has part: feature:1504802-1504814:1:exon

XP_025333483.1
type: Protein
SIO_000068: ncbiprotein

position:1501329:1
position: 1501329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504814:1
position: 1504814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1501329-1501383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503062-1503133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1503235-1503334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1504802-1504814:1:exon

PPDPFL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PPDPFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic progenitor cell differentiation and proliferation factor-like protein isoform X1
translation: MASVPSIGCLLAKNQYYRKTSISSVSSLTDSVNVIPDDKSQQGLLNVAESSWWFKSFFHSEPVPSDVRRKDLSASGYVLVFL
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1501329..1501383,1503062..1503133,1503235..1503356)
location: region:1501329-1503356:1
so has part: feature:1501329-1501383:1:exon
so has part: feature:1503062-1503133:1:exon
so has part: feature:1503235-1503356:1:exon

XP_025333482.1
type: Protein
SIO_000068: ncbiprotein

position:1503356:1
position: 1503356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1501329-1501383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503062-1503133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1503235-1503356:1:exon

LOC112678430
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678430
note: hyaluronan mediated motility receptor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1738818..1741185)
location: region:1738818-1741185:-1
so has part: feature:1738818-1741185:-1:exon
subclass of: SO_0000010

112678430
type: Gene
SIO_000068: ncbigene

position:1738818:-1
position: 1738818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741185:-1
position: 1741185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1738818-1741185:-1:exon

LOC112678430
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: LOC112678430
product: hyaluronan mediated motility receptor-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_035708272.2
SIO_010081: LOC112678430
subclass of: SO_0000673
so part of: LOC112678430
location: complement(1738818..1741185)
location: region:1738818-1741185:-1
so has part: feature:1738818-1741185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1738818-1741185:-1:exon

LOC112678430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: LOC112678430
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1738962..1738964),aa:OTHER)
product: LOW QUALITY PROTEIN: hyaluronan mediated motility receptor-like
translation: MSFPKAPLKRFNDPSGCAPSPGAYDVKTSEVLKGPVSFQKSQRFKKXKESQQNLNVDRDTTLPASARKVKTLGLKKESQKNDKDLKIPEKEIRVLVQEHGAQDKQIQDLEAELEKVEAKLNAAVREKTSLSASNASLEKQLIELTRSNELLKSKFSEDNNQKTMRILSLELMKLRNKGETKMRNMMAKQEGMEVKLQVTQKNLEESXGKIAQLEGKLVSIEKEKTDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNEVVSLKQSLEENVVLLSKQVEDLNAKCQLLEKEKEDLVNRDRVRDETLKSEMQNLKENLILEKQEHEKLRQKELQTDSLLQQEKELSSSLQQKLRSFQEEMMKERNLFEEELKQALDELDKLQQKEEQAERLVRQLEEKTKSRAAELKFLEEKLKGKEAELEESNAAHSQATLLLQESYHSIVQSLGDATAQFESYKAFMAREIEDLKLENLSLQEKVTRAEKSAEDTQHQILATENANQEYTRMLLDLQTKSALKEAEIKEITVSSLKTITDLQNQLKQKGEELKKQLEEEEARKAGKKNTVAELTEEMNKWCLLYEELYNKTKPFQLQLDAFEAEKQALLNEHGAAQEQLNKLRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLRSQLAKRKQSEAKLQEELNKVLGIKHFDPSKAFLCESKENFALKTPLKEGNSNCYXAPVEFQE
SIO_010081: LOC112678430
subclass of: SO_0000673
so part of: LOC112678430
location: complement(1738938..1741101)
location: region:1738938-1741101:-1
so has part: feature:1738938-1741101:-1:exon

XP_035564165.2
type: Protein
SIO_000068: ncbiprotein

position:1738938:-1
position: 1738938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741101:-1
position: 1741101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1738938-1741101:-1:exon

LOC125754007
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC125754007
note: uncharacterized LOC125754007; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1785947..1789925
location: region:1785947-1789925:1
so has part: feature:1785947-1789925:1:exon
subclass of: SO_0000011

125754007
type: Gene
SIO_000068: ncbigene

position:1785947:1
position: 1785947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1789925:1
position: 1789925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1785947-1789925:1:exon

LOC125754007
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC125754007
product: uncharacterized LOC125754007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007407165.1
SIO_010081: LOC125754007
subclass of: SO_0000673
so part of: LOC125754007
location: join(1785947..1786156,1787720..1787961,1789689..1789925)
location: region:1785947-1789925:1
so has part: feature:1785947-1786156:1:exon
so has part: feature:1787720-1787961:1:exon
so has part: feature:1789689-1789925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1785947-1786156:1:exon

position:1786156:1
position: 1786156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1787720-1787961:1:exon

position:1787720:1
position: 1787720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787961:1
position: 1787961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1789689-1789925:1:exon

position:1789689:1
position: 1789689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112678350
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678350
note: ferritin heavy chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1795379..1800661
location: region:1795379-1800661:1
so has part: feature:1795379-1800661:1:exon

112678350
type: Gene
SIO_000068: ncbigene

position:1795379:1
position: 1795379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800661:1
position: 1800661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1795379-1800661:1:exon

LOC112678350
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678350
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC112678350
subclass of: SO_0000673
so part of: LOC112678350
location: 1795379..1795451
location: region:1795379-1795451:1
so has part: feature:1795379-1795451:1:exon

position:1795451:1
position: 1795451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1795379-1795451:1:exon

LOC112678350
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678350
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC112678350
subclass of: SO_0000673
so part of: LOC112678350
location: 1799912..1800661
location: region:1799912-1800661:1
so has part: feature:1799912-1800661:1:exon

position:1799912:1
position: 1799912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1799912-1800661:1:exon

LOC112678351
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678351
note: ribosomal protein L18-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1958816..1959356
location: region:1958816-1959356:1
so has part: feature:1958816-1959356:1:exon

112678351
type: Gene
SIO_000068: ncbigene

position:1958816:1
position: 1958816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959356:1
position: 1959356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958816-1959356:1:exon

LOC112678351
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC112678351
subclass of: SO_0000673
so part of: LOC112678351
location: 1958816..1959356
location: region:1958816-1959356:1
so has part: feature:1958816-1959356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1958816-1959356:1:exon

SNTG1
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: SNTG1
note: syntrophin gamma 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2182694..3001177
location: region:2182694-3001177:1
so has part: feature:2182694-3001177:1:exon
subclass of: SO_0000010

112678431
type: Gene
SIO_000068: ncbigene

position:2182694:1
position: 2182694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3001177:1
position: 3001177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182694-3001177:1:exon

SNTG1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: SNTG1
product: syntrophin gamma 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007407164.1
SIO_010081: SNTG1
so part of: SNTG1
location: join(2182694..2184148,2466028..2466102,2709792..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2869881..2869919,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2950465..2950528,2965570..2965680,2999869..2999892)
location: region:2182694-2999892:1
so has part: feature:2182694-2184148:1:exon
so has part: feature:2466028-2466102:1:exon
so has part: feature:2709792-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2869881-2869919:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2950465-2950528:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-2999892:1:exon

position:2999892:1
position: 2999892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182694-2184148:1:exon

position:2184148:1
position: 2184148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2466028-2466102:1:exon

position:2466028:1
position: 2466028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466102:1
position: 2466102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2709792-2709842:1:exon

position:2709792:1
position: 2709792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2709842:1
position: 2709842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2718467-2718601:1:exon

position:2718467:1
position: 2718467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2718601:1
position: 2718601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2757478-2757534:1:exon

position:2757478:1
position: 2757478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757534:1
position: 2757534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2768701-2768758:1:exon

position:2768701:1
position: 2768701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768758:1
position: 2768758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2769545-2769588:1:exon

position:2769545:1
position: 2769545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2769588:1
position: 2769588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2769682-2769723:1:exon

position:2769682:1
position: 2769682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2769723:1
position: 2769723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2805960-2806062:1:exon

position:2805960:1
position: 2805960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2806062:1
position: 2806062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2810945-2811027:1:exon

position:2810945:1
position: 2810945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2811027:1
position: 2811027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2815611-2815741:1:exon

position:2815611:1
position: 2815611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2815741:1
position: 2815741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2829621-2829750:1:exon

position:2829621:1
position: 2829621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829750:1
position: 2829750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2851930-2851968:1:exon

position:2851930:1
position: 2851930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2851968:1
position: 2851968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2869881-2869919:1:exon

position:2869881:1
position: 2869881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869919:1
position: 2869919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2909855-2909971:1:exon

position:2909855:1
position: 2909855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2909971:1
position: 2909971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2911082-2911153:1:exon

position:2911082:1
position: 2911082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2911153:1
position: 2911153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2940966-2941118:1:exon

position:2940966:1
position: 2940966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2941118:1
position: 2941118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2945561-2945653:1:exon

position:2945561:1
position: 2945561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945653:1
position: 2945653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2950465-2950528:1:exon

position:2950465:1
position: 2950465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950528:1
position: 2950528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2965570-2965680:1:exon

position:2965570:1
position: 2965570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2965680:1
position: 2965680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2999869-2999892:1:exon

position:2999869:1
position: 2999869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: SNTG1
product: syntrophin gamma 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103928.1
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2182697..2184148,2239949..2240044,2466028..2466102,2709792..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2869881..2869919,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3001177)
location: region:2182697-3001177:1
so has part: feature:2182697-2184148:1:exon
so has part: feature:2239949-2240044:1:exon
so has part: feature:2466028-2466102:1:exon
so has part: feature:2709792-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2869881-2869919:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3001177:1:exon

position:2182697:1
position: 2182697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182697-2184148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2239949-2240044:1:exon

position:2239949:1
position: 2239949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2240044:1
position: 2240044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2466028-2466102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2709792-2709842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2869881-2869919:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2999869-3001177:1:exon

SNTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: SNTG1
product: syntrophin gamma 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103927.1
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2182697..2184148,2466028..2466102,2709792..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2869881..2869919,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3001177)
location: region:2182697-3001177:1
so has part: feature:2182697-2184148:1:exon
so has part: feature:2466028-2466102:1:exon
so has part: feature:2709792-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2869881-2869919:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3001177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182697-2184148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2466028-2466102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2709792-2709842:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2869881-2869919:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2999869-3001177:1:exon

SNTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: SNTG1
product: syntrophin gamma 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103930.1
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2182697..2184148,2709792..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2869881..2869919,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3001177)
location: region:2182697-3001177:1
so has part: feature:2182697-2184148:1:exon
so has part: feature:2709792-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2869881-2869919:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3001177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182697-2184148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2709792-2709842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2869881-2869919:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2999869-3001177:1:exon

SNTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: SNTG1
product: syntrophin gamma 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477701.3
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2182697..2182965,2183364..2184148,2466028..2466102,2709792..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2869881..2869919,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3001177)
location: region:2182697-3001177:1
so has part: feature:2182697-2182965:1:exon
so has part: feature:2183364-2184148:1:exon
so has part: feature:2466028-2466102:1:exon
so has part: feature:2709792-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2869881-2869919:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3001177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182697-2182965:1:exon

position:2182965:1
position: 2182965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2183364-2184148:1:exon

position:2183364:1
position: 2183364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2466028-2466102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2709792-2709842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2869881-2869919:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2999869-3001177:1:exon

SNTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: SNTG1
product: syntrophin gamma 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103931.1
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2182702..2184148,2466028..2466102,2709792..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3001177)
location: region:2182702-3001177:1
so has part: feature:2182702-2184148:1:exon
so has part: feature:2466028-2466102:1:exon
so has part: feature:2709792-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3001177:1:exon

position:2182702:1
position: 2182702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182702-2184148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2466028-2466102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2709792-2709842:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2999869-3001177:1:exon

LOC112678432
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678432
note: ubiquitin-conjugating enzyme E2 variant 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2353046..2353489)
location: region:2353046-2353489:-1
so has part: feature:2353046-2353489:-1:exon

112678432
type: Gene
SIO_000068: ncbigene

position:2353046:-1
position: 2353046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2353489:-1
position: 2353489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353046-2353489:-1:exon

LOC112678432
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
pseudo: true
SIO_010081: LOC112678432
subclass of: SO_0000673
so part of: LOC112678432
location: complement(2353046..2353489)
location: region:2353046-2353489:-1
so has part: feature:2353046-2353489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2353046-2353489:-1:exon

LOC112678673
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678673
note: U4 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(2359779..2359905)
location: region:2359779-2359905:-1
so has part: feature:2359779-2359905:-1:exon

112678673
type: Gene
SIO_000068: ncbigene

position:2359779:-1
position: 2359779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2359905:-1
position: 2359905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2359779-2359905:-1:exon

LOC112678673
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678673
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC112678673
subclass of: SO_0000673
so part of: LOC112678673
location: complement(2359779..2359905)
location: region:2359779-2359905:-1
so has part: feature:2359779-2359905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2359779-2359905:-1:exon

SNTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-1-syntrophin isoform X1
translation: MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCSGIIQCLSAEDCIDWLQAIATNISNLTKHNIKKINRNFPVNQQVSSDFLFLQDPMLIVYMGWCEAREQDPLQDRAYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKHCFTVQSESGEDLYFSVELDSDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAILWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLYLGNQTAASTAASSSTTSRAKYTT
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2709816..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2869881..2869919,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3000027)
location: region:2709816-3000027:1
so has part: feature:2709816-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2869881-2869919:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3000027:1:exon

XP_025333486.1
type: Protein
SIO_000068: ncbiprotein

position:2709816:1
position: 2709816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3000027:1
position: 3000027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709816-2709842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2869881-2869919:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2999869-3000027:1:exon

SNTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-1-syntrophin isoform X1
translation: MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCSGIIQCLSAEDCIDWLQAIATNISNLTKHNIKKINRNFPVNQQVSSDFLFLQDPMLIVYMGWCEAREQDPLQDRAYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKHCFTVQSESGEDLYFSVELDSDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAILWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLYLGNQTAASTAASSSTTSRAKYTT
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2709816..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2869881..2869919,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3000027)
location: region:2709816-3000027:1
so has part: feature:2709816-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2869881-2869919:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3000027:1:exon

XP_048959884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2709816-2709842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2869881-2869919:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2999869-3000027:1:exon

SNTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-1-syntrophin isoform X1
translation: MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCSGIIQCLSAEDCIDWLQAIATNISNLTKHNIKKINRNFPVNQQVSSDFLFLQDPMLIVYMGWCEAREQDPLQDRAYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKHCFTVQSESGEDLYFSVELDSDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAILWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLYLGNQTAASTAASSSTTSRAKYTT
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2709816..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2869881..2869919,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3000027)
location: region:2709816-3000027:1
so has part: feature:2709816-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2869881-2869919:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3000027:1:exon

XP_048959885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2709816-2709842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2869881-2869919:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2999869-3000027:1:exon

SNTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-1-syntrophin isoform X1
translation: MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCSGIIQCLSAEDCIDWLQAIATNISNLTKHNIKKINRNFPVNQQVSSDFLFLQDPMLIVYMGWCEAREQDPLQDRAYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKHCFTVQSESGEDLYFSVELDSDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAILWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLYLGNQTAASTAASSSTTSRAKYTT
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2709816..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2869881..2869919,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3000027)
location: region:2709816-3000027:1
so has part: feature:2709816-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2869881-2869919:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3000027:1:exon

XP_048959887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2709816-2709842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2869881-2869919:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2999869-3000027:1:exon

SNTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-1-syntrophin isoform X2
translation: MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCSGIIQCLSAEDCIDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQDRAYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKHCFTVQSESGEDLYFSVELDSDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAILWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLYLGNQTAASTAASSSTTSRAKYTT
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2709816..2709842,2718467..2718601,2757478..2757534,2768701..2768758,2769545..2769588,2769682..2769723,2805960..2806062,2810945..2811027,2815611..2815741,2829621..2829750,2851930..2851968,2909855..2909971,2911082..2911153,2940966..2941118,2945561..2945653,2965570..2965680,2999869..3000027)
location: region:2709816-3000027:1
so has part: feature:2709816-2709842:1:exon
so has part: feature:2718467-2718601:1:exon
so has part: feature:2757478-2757534:1:exon
so has part: feature:2768701-2768758:1:exon
so has part: feature:2769545-2769588:1:exon
so has part: feature:2769682-2769723:1:exon
so has part: feature:2805960-2806062:1:exon
so has part: feature:2810945-2811027:1:exon
so has part: feature:2815611-2815741:1:exon
so has part: feature:2829621-2829750:1:exon
so has part: feature:2851930-2851968:1:exon
so has part: feature:2909855-2909971:1:exon
so has part: feature:2911082-2911153:1:exon
so has part: feature:2940966-2941118:1:exon
so has part: feature:2945561-2945653:1:exon
so has part: feature:2965570-2965680:1:exon
so has part: feature:2999869-3000027:1:exon

XP_048959888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2709816-2709842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2718467-2718601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757478-2757534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2768701-2768758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769545-2769588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2769682-2769723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2805960-2806062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810945-2811027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2815611-2815741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2829621-2829750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2851930-2851968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2909855-2909971:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2911082-2911153:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2940966-2941118:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2945561-2945653:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2965570-2965680:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2999869-3000027:1:exon

LOC112678668
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678668
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3217086..3217187
location: region:3217086-3217187:1
so has part: feature:3217086-3217187:1:exon
subclass of: SO_0000623

112678668
type: Gene
SIO_000068: ncbigene

position:3217086:1
position: 3217086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3217187:1
position: 3217187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3217086-3217187:1:exon

LOC112678668
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: snRNA
gene: LOC112678668
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003147753.1
SIO_010081: LOC112678668
subclass of: SO_0000673
so part of: LOC112678668
location: 3217086..3217187
location: region:3217086-3217187:1
so has part: feature:3217086-3217187:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3217086-3217187:1:exon

PXDNL
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: PXDNL
note: peroxidasin like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3454594..3884057)
location: region:3454594-3884057:-1
so has part: feature:3454594-3884057:-1:exon
subclass of: SO_0000010

112678433
type: Gene
SIO_000068: ncbigene

position:3454594:-1
position: 3454594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3884057:-1
position: 3884057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3454594-3884057:-1:exon

PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708326.2
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3454594..3455027,3455758..3455871,3464831..3464960,3468536..3468650,3484360..3484568,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3735209..3735280,3883887..3884057))
location: region:3454594-3884057:-1
so has part: feature:3883887-3884057:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3484360-3484568:-1:exon
so has part: feature:3468536-3468650:-1:exon
so has part: feature:3464831-3464960:-1:exon
so has part: feature:3455758-3455871:-1:exon
so has part: feature:3454594-3455027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884057:-1:exon

position:3883887:-1
position: 3883887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

position:3735209:-1
position: 3735209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3735280:-1
position: 3735280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3650743-3650814:-1:exon

position:3650743:-1
position: 3650743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3650814:-1
position: 3650814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3590160-3590231:-1:exon

position:3590160:-1
position: 3590160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3590231:-1
position: 3590231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3585430-3585501:-1:exon

position:3585430:-1
position: 3585430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3585501:-1
position: 3585501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3579249-3579418:-1:exon

position:3579249:-1
position: 3579249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3579418:-1
position: 3579418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3576566-3576683:-1:exon

position:3576566:-1
position: 3576566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3576683:-1
position: 3576683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3569317-3569486:-1:exon

position:3569317:-1
position: 3569317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3569486:-1
position: 3569486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3565214-3565480:-1:exon

position:3565214:-1
position: 3565214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3565480:-1
position: 3565480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3561207-3561323:-1:exon

position:3561207:-1
position: 3561207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3561323:-1
position: 3561323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3558712-3558870:-1:exon

position:3558712:-1
position: 3558712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3558870:-1
position: 3558870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3540574-3540686:-1:exon

position:3540574:-1
position: 3540574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3540686:-1
position: 3540686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3537842-3537998:-1:exon

position:3537842:-1
position: 3537842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3537998:-1
position: 3537998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3528629-3528737:-1:exon

position:3528629:-1
position: 3528629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3528737:-1
position: 3528737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3526697-3526854:-1:exon

position:3526697:-1
position: 3526697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3526854:-1
position: 3526854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3523199-3524708:-1:exon

position:3523199:-1
position: 3523199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3524708:-1
position: 3524708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3486739-3486873:-1:exon

position:3486739:-1
position: 3486739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3486873:-1
position: 3486873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3484360-3484568:-1:exon

position:3484360:-1
position: 3484360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3484568:-1
position: 3484568
reference: sequence
type: ReverseStrandPosition
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PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103924.1
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
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urn:…
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SIO_000628: feature:3454594-3455027:-1:exon

PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477706.3
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
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urn:…
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PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477709.3
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
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PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477712.3
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
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location: region:3454594-3585501:-1
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urn:…
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PXDNL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
transcript id: XR_003147577.3
SIO_010081: PXDNL
so part of: PXDNL
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position:3454890:-1
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urn:…
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urn:…
SIO_000300: 21
SIO_000628: feature:3454890-3455027:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable oxidoreductase PXDNL isoform X3
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLRMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKRTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3454896..3455027,3455758..3455871,3464831..3464960,3468536..3468650,3484360..3484568,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3735209..3735280,3883887..3884050))
location: region:3454896-3884050:-1
so has part: feature:3883887-3884050:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3484360-3484568:-1:exon
so has part: feature:3468536-3468650:-1:exon
so has part: feature:3464831-3464960:-1:exon
so has part: feature:3455758-3455871:-1:exon
so has part: feature:3454896-3455027:-1:exon

XP_035564219.1
type: Protein
SIO_000068: ncbiprotein

position:3454896:-1
position: 3454896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3884050:-1
position: 3884050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3650743-3650814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3590160-3590231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3484360-3484568:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3468536-3468650:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3464831-3464960:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3455758-3455871:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3454896-3455027:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable oxidoreductase PXDNL isoform X2
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLRMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKEQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKRTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3454896..3455027,3455758..3455871,3464831..3464960,3468557..3468650,3484360..3484568,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3678394..3678465,3735209..3735280,3883887..3884050))
location: region:3454896-3884050:-1
so has part: feature:3883887-3884050:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3678394-3678465:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3484360-3484568:-1:exon
so has part: feature:3468557-3468650:-1:exon
so has part: feature:3464831-3464960:-1:exon
so has part: feature:3455758-3455871:-1:exon
so has part: feature:3454896-3455027:-1:exon

XP_048959881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3678394-3678465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650743-3650814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3590160-3590231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3484360-3484568:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3468557-3468650:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3464831-3464960:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3455758-3455871:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3454896-3455027:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable oxidoreductase PXDNL isoform X1
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLRMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKRTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3454896..3455027,3455758..3455871,3464831..3464960,3468536..3468650,3484360..3484568,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3678394..3678465,3735209..3735280,3883887..3884050))
location: region:3454896-3884050:-1
so has part: feature:3883887-3884050:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3678394-3678465:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3484360-3484568:-1:exon
so has part: feature:3468536-3468650:-1:exon
so has part: feature:3464831-3464960:-1:exon
so has part: feature:3455758-3455871:-1:exon
so has part: feature:3454896-3455027:-1:exon

XP_025333491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3678394-3678465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650743-3650814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3590160-3590231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3484360-3484568:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3468536-3468650:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3464831-3464960:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3455758-3455871:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3454896-3455027:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable oxidoreductase PXDNL isoform X4
translation: MLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLRMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKRTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3454896..3455027,3455758..3455871,3464831..3464960,3468536..3468650,3484360..3484568,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590206))
location: region:3454896-3590206:-1
so has part: feature:3590160-3590206:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3484360-3484568:-1:exon
so has part: feature:3468536-3468650:-1:exon
so has part: feature:3464831-3464960:-1:exon
so has part: feature:3455758-3455871:-1:exon
so has part: feature:3454896-3455027:-1:exon

XP_025333494.1
type: Protein
SIO_000068: ncbiprotein

position:3590206:-1
position: 3590206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3590160-3590206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3484360-3484568:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3468536-3468650:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3464831-3464960:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3455758-3455871:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3454896-3455027:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable oxidoreductase PXDNL isoform X7
translation: MRVSPKAPRTLHRFVNSRRIQLCHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLRMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKRTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3454896..3455027,3455758..3455871,3464831..3464960,3468536..3468650,3484360..3484568,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3579249..3579316))
location: region:3454896-3579316:-1
so has part: feature:3579249-3579316:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3484360-3484568:-1:exon
so has part: feature:3468536-3468650:-1:exon
so has part: feature:3464831-3464960:-1:exon
so has part: feature:3455758-3455871:-1:exon
so has part: feature:3454896-3455027:-1:exon

XP_025333497.1
type: Protein
SIO_000068: ncbiprotein

position:3579316:-1
position: 3579316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3579249-3579316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3484360-3484568:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3468536-3468650:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3464831-3464960:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3455758-3455871:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454896-3455027:-1:exon

PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
transcript id: XM_049103926.1
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3455758..3455871,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3678394..3678465,3735209..3735280,3883887..3884057))
location: region:3455758-3884057:-1
so has part: feature:3883887-3884057:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3678394-3678465:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3455758-3455871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3678394-3678465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650743-3650814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3590160-3590231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3455758-3455871:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable oxidoreductase PXDNL isoform X6
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDR
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3455868..3455871,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3678394..3678465,3735209..3735280,3883887..3884050))
location: region:3455868-3884050:-1
so has part: feature:3883887-3884050:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3678394-3678465:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3455868-3455871:-1:exon

XP_048959883.1
type: Protein
SIO_000068: ncbiprotein

position:3455868:-1
position: 3455868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3678394-3678465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650743-3650814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3590160-3590231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3455868-3455871:-1:exon

PXDNL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
transcript id: XR_007407163.1
SIO_010081: PXDNL
so part of: PXDNL
location: complement(join(3464925..3464960,3468557..3468650,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3678394..3678465,3735209..3735280,3883887..3884057))
location: region:3464925-3884057:-1
so has part: feature:3883887-3884057:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3678394-3678465:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3468557-3468650:-1:exon
so has part: feature:3464925-3464960:-1:exon

position:3464925:-1
position: 3464925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3678394-3678465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650743-3650814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3590160-3590231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3468557-3468650:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3464925-3464960:-1:exon

PXDNL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
transcript id: XR_003147578.3
SIO_010081: PXDNL
so part of: PXDNL
location: complement(join(3464926..3464960,3468536..3468650,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3678394..3678465,3735209..3735280,3883887..3884057))
location: region:3464926-3884057:-1
so has part: feature:3883887-3884057:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3678394-3678465:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3468536-3468650:-1:exon
so has part: feature:3464926-3464960:-1:exon

position:3464926:-1
position: 3464926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3678394-3678465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650743-3650814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3590160-3590231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3468536-3468650:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3464926-3464960:-1:exon

PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PXDNL
product: peroxidasin like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
transcript id: XM_025477710.3
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3481478..3483108,3484360..3484568,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3678394..3678465,3735209..3735280,3883887..3884057))
location: region:3481478-3884057:-1
so has part: feature:3883887-3884057:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3678394-3678465:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3484360-3484568:-1:exon
so has part: feature:3481478-3483108:-1:exon

position:3481478:-1
position: 3481478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3678394-3678465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650743-3650814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3590160-3590231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3484360-3484568:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3481478-3483108:-1:exon

position:3483108:-1
position: 3483108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable oxidoreductase PXDNL isoform X5
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLRMWQDCCEVIGLDIEPIEQKEKIDGMEGCEPQWK
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3483029..3483108,3484360..3484568,3486739..3486873,3523199..3524708,3526697..3526854,3528629..3528737,3537842..3537998,3540574..3540686,3558712..3558870,3561207..3561323,3565214..3565480,3569317..3569486,3576566..3576683,3579249..3579418,3585430..3585501,3590160..3590231,3650743..3650814,3678394..3678465,3735209..3735280,3883887..3884050))
location: region:3483029-3884050:-1
so has part: feature:3883887-3884050:-1:exon
so has part: feature:3735209-3735280:-1:exon
so has part: feature:3678394-3678465:-1:exon
so has part: feature:3650743-3650814:-1:exon
so has part: feature:3590160-3590231:-1:exon
so has part: feature:3585430-3585501:-1:exon
so has part: feature:3579249-3579418:-1:exon
so has part: feature:3576566-3576683:-1:exon
so has part: feature:3569317-3569486:-1:exon
so has part: feature:3565214-3565480:-1:exon
so has part: feature:3561207-3561323:-1:exon
so has part: feature:3558712-3558870:-1:exon
so has part: feature:3540574-3540686:-1:exon
so has part: feature:3537842-3537998:-1:exon
so has part: feature:3528629-3528737:-1:exon
so has part: feature:3526697-3526854:-1:exon
so has part: feature:3523199-3524708:-1:exon
so has part: feature:3486739-3486873:-1:exon
so has part: feature:3484360-3484568:-1:exon
so has part: feature:3483029-3483108:-1:exon

XP_025333495.1
type: Protein
SIO_000068: ncbiprotein

position:3483029:-1
position: 3483029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3883887-3884050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735209-3735280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3678394-3678465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650743-3650814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3590160-3590231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3585430-3585501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3579249-3579418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3576566-3576683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569317-3569486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565214-3565480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561207-3561323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3558712-3558870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3540574-3540686:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3537842-3537998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3528629-3528737:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3526697-3526854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3523199-3524708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3486739-3486873:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3484360-3484568:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3483029-3483108:-1:exon

LOC112678651
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678651
note: 40S ribosomal protein S20-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3696017..3699457
location: region:3696017-3699457:1
so has part: feature:3696017-3699457:1:exon

112678651
type: Gene
SIO_000068: ncbigene

position:3696017:1
position: 3696017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3699457:1
position: 3699457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3696017-3699457:1:exon

LOC112678651
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678651
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
pseudo: true
SIO_010081: LOC112678651
subclass of: SO_0000673
so part of: LOC112678651
location: 3696017..3696318
location: region:3696017-3696318:1
so has part: feature:3696017-3696318:1:exon

position:3696318:1
position: 3696318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3696017-3696318:1:exon

LOC112678651
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678651
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
pseudo: true
SIO_010081: LOC112678651
subclass of: SO_0000673
so part of: LOC112678651
location: 3699080..3699457
location: region:3699080-3699457:1
so has part: feature:3699080-3699457:1:exon

position:3699080:1
position: 3699080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3699080-3699457:1:exon

LOC112678434
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678434
note: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3727767..3729047)
location: region:3727767-3729047:-1
so has part: feature:3727767-3729047:-1:exon

112678434
type: Gene
SIO_000068: ncbigene

position:3727767:-1
position: 3727767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3729047:-1
position: 3729047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3727767-3729047:-1:exon

LOC112678434
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678434
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC112678434
subclass of: SO_0000673
so part of: LOC112678434
location: complement(3727767..3729047)
location: region:3727767-3729047:-1
so has part: feature:3727767-3729047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3727767-3729047:-1:exon

PCMTD1
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: PCMTD1
note: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3888290..3956504)
location: region:3888290-3956504:-1
so has part: feature:3888290-3956504:-1:exon
subclass of: SO_0000010

112678435
type: Gene
SIO_000068: ncbigene

position:3888290:-1
position: 3888290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3956504:-1
position: 3956504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3888290-3956504:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X12
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477717.3
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3956376..3956504))
location: region:3888290-3956504:-1
so has part: feature:3956376-3956504:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3956376-3956504:-1:exon

position:3956376:-1
position: 3956376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

position:3912867:-1
position: 3912867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3912969:-1
position: 3912969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

position:3901247:-1
position: 3901247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3901418:-1
position: 3901418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

position:3899516:-1
position: 3899516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3899639:-1
position: 3899639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3888290-3891431:-1:exon

position:3891431:-1
position: 3891431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477713.3
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3956376..3956504))
location: region:3888290-3956504:-1
so has part: feature:3956376-3956504:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3956376-3956504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3926620-3927050:-1:exon

position:3926620:-1
position: 3926620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927050:-1
position: 3927050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103935.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3949479..3949563,3956376..3956460))
location: region:3888290-3956460:-1
so has part: feature:3956376-3956460:-1:exon
so has part: feature:3949479-3949563:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

position:3956460:-1
position: 3956460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3956376-3956460:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3949479-3949563:-1:exon

position:3949479:-1
position: 3949479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3949563:-1
position: 3949563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477714.3
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3948656..3948765,3949479..3949563,3956376..3956460))
location: region:3888290-3956460:-1
so has part: feature:3956376-3956460:-1:exon
so has part: feature:3949479-3949563:-1:exon
so has part: feature:3948656-3948765:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3956376-3956460:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3949479-3949563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3948656-3948765:-1:exon

position:3948656:-1
position: 3948656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3948765:-1
position: 3948765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708344.2
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3955866..3955922))
location: region:3888290-3955922:-1
so has part: feature:3955866-3955922:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

position:3955922:-1
position: 3955922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3955866-3955922:-1:exon

position:3955866:-1
position: 3955866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477715.3
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3955541..3955694))
location: region:3888290-3955694:-1
so has part: feature:3955541-3955694:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

position:3955694:-1
position: 3955694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3955541-3955694:-1:exon

position:3955541:-1
position: 3955541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103932.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3948656..3948733,3949479..3949563,3955541..3955610))
location: region:3888290-3955610:-1
so has part: feature:3955541-3955610:-1:exon
so has part: feature:3949479-3949563:-1:exon
so has part: feature:3948656-3948733:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

position:3955610:-1
position: 3955610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3955541-3955610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3949479-3949563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3948656-3948733:-1:exon

position:3948733:-1
position: 3948733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708341.2
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3938013..3938198))
location: region:3888290-3938198:-1
so has part: feature:3938013-3938198:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

position:3938198:-1
position: 3938198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3938013-3938198:-1:exon

position:3938013:-1
position: 3938013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708340.2
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3932648..3932665))
location: region:3888290-3932665:-1
so has part: feature:3932648-3932665:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

position:3932665:-1
position: 3932665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3932648-3932665:-1:exon

position:3932648:-1
position: 3932648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103934.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3930173..3930191))
location: region:3888290-3930191:-1
so has part: feature:3930173-3930191:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

position:3930191:-1
position: 3930191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3930173-3930191:-1:exon

position:3930173:-1
position: 3930173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708339.2
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3930169..3930187))
location: region:3888290-3930187:-1
so has part: feature:3930169-3930187:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

position:3930187:-1
position: 3930187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3930169-3930187:-1:exon

position:3930169:-1
position: 3930169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708342.2
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3927050,3930120..3930139))
location: region:3888290-3930139:-1
so has part: feature:3930120-3930139:-1:exon
so has part: feature:3926620-3927050:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

position:3930139:-1
position: 3930139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3930120-3930139:-1:exon

position:3930120:-1
position: 3930120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926620-3927050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708346.2
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3888290..3891431,3899516..3899639,3901247..3901418,3906855..3907046,3912867..3912969))
location: region:3888290-3912969:-1
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3906855-3907046:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3888290-3891431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3906855-3907046:-1:exon

position:3906855:-1
position: 3906855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3907046:-1
position: 3907046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3888290-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_025333498.1
type: Protein
SIO_000068: ncbiprotein

position:3891067:-1
position: 3891067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3926926:-1
position: 3926926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_025333499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_025333500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_035564232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_035564233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_035564234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_035564235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_035564237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_048959889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_048959891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901418,3912867..3912969,3926620..3926926))
location: region:3891067-3926926:-1
so has part: feature:3926620-3926926:-1:exon
so has part: feature:3912867-3912969:-1:exon
so has part: feature:3901247-3901418:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_048959892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3926620-3926926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3912867-3912969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3901247-3901418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X2
translation: MKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901300))
location: region:3891067-3901300:-1
so has part: feature:3901247-3901300:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_025333502.1
type: Protein
SIO_000068: ncbiprotein

position:3901300:-1
position: 3901300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3901247-3901300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3891067-3891431:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X2
translation: MKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(3891067..3891431,3899516..3899639,3901247..3901300))
location: region:3891067-3901300:-1
so has part: feature:3901247-3901300:-1:exon
so has part: feature:3899516-3899639:-1:exon
so has part: feature:3891067-3891431:-1:exon

XP_035564239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3901247-3901300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3899516-3899639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3891067-3891431:-1:exon

ST18
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: ST18
note: ST18 C2H2C-type zinc finger transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4148984..4294594)
location: region:4148984-4294594:-1
so has part: feature:4148984-4294594:-1:exon
subclass of: SO_0000010

112678436
type: Gene
SIO_000068: ncbigene

position:4148984:-1
position: 4148984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4294594:-1
position: 4294594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4148984-4294594:-1:exon

ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708335.2
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4148984..4151431,4153568..4153711,4155606..4155709,4162172..4162260,4167597..4167818,4168713..4168793,4169122..4169184,4171754..4171822,4172617..4172679,4179422..4179537,4186247..4186492,4194923..4195134,4197288..4197481,4199470..4199574,4200671..4200761,4202704..4202838,4207468..4208259,4215140..4215339,4255025..4255055,4257160..4257214,4272701..4272746,4294436..4294594))
location: region:4148984-4294594:-1
so has part: feature:4294436-4294594:-1:exon
so has part: feature:4272701-4272746:-1:exon
so has part: feature:4257160-4257214:-1:exon
so has part: feature:4255025-4255055:-1:exon
so has part: feature:4215140-4215339:-1:exon
so has part: feature:4207468-4208259:-1:exon
so has part: feature:4202704-4202838:-1:exon
so has part: feature:4200671-4200761:-1:exon
so has part: feature:4199470-4199574:-1:exon
so has part: feature:4197288-4197481:-1:exon
so has part: feature:4194923-4195134:-1:exon
so has part: feature:4186247-4186492:-1:exon
so has part: feature:4179422-4179537:-1:exon
so has part: feature:4172617-4172679:-1:exon
so has part: feature:4171754-4171822:-1:exon
so has part: feature:4169122-4169184:-1:exon
so has part: feature:4168713-4168793:-1:exon
so has part: feature:4167597-4167818:-1:exon
so has part: feature:4162172-4162260:-1:exon
so has part: feature:4155606-4155709:-1:exon
so has part: feature:4153568-4153711:-1:exon
so has part: feature:4148984-4151431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4294436-4294594:-1:exon

position:4294436:-1
position: 4294436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4272701-4272746:-1:exon

position:4272701:-1
position: 4272701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4272746:-1
position: 4272746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4257160-4257214:-1:exon

position:4257160:-1
position: 4257160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4257214:-1
position: 4257214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4255025-4255055:-1:exon

position:4255025:-1
position: 4255025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4255055:-1
position: 4255055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4215140-4215339:-1:exon

position:4215140:-1
position: 4215140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4215339:-1
position: 4215339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4207468-4208259:-1:exon

position:4207468:-1
position: 4207468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4208259:-1
position: 4208259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4202704-4202838:-1:exon

position:4202704:-1
position: 4202704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4202838:-1
position: 4202838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4200671-4200761:-1:exon

position:4200671:-1
position: 4200671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4200761:-1
position: 4200761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4199470-4199574:-1:exon

position:4199470:-1
position: 4199470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4199574:-1
position: 4199574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4197288-4197481:-1:exon

position:4197288:-1
position: 4197288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4197481:-1
position: 4197481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4194923-4195134:-1:exon

position:4194923:-1
position: 4194923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4195134:-1
position: 4195134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4186247-4186492:-1:exon

position:4186247:-1
position: 4186247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4186492:-1
position: 4186492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4179422-4179537:-1:exon

position:4179422:-1
position: 4179422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4179537:-1
position: 4179537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4172617-4172679:-1:exon

position:4172617:-1
position: 4172617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4172679:-1
position: 4172679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4171754-4171822:-1:exon

position:4171754:-1
position: 4171754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4171822:-1
position: 4171822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4169122-4169184:-1:exon

position:4169122:-1
position: 4169122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4169184:-1
position: 4169184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4168713-4168793:-1:exon

position:4168713:-1
position: 4168713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4168793:-1
position: 4168793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4167597-4167818:-1:exon

position:4167597:-1
position: 4167597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4167818:-1
position: 4167818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4162172-4162260:-1:exon

position:4162172:-1
position: 4162172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4162260:-1
position: 4162260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4155606-4155709:-1:exon

position:4155606:-1
position: 4155606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4155709:-1
position: 4155709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4153568-4153711:-1:exon

position:4153568:-1
position: 4153568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4153711:-1
position: 4153711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4148984-4151431:-1:exon

position:4151431:-1
position: 4151431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477725.3
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4148984..4151431,4153568..4153711,4155606..4155709,4162172..4162260,4167597..4167818,4168713..4168793,4169122..4169184,4171754..4171822,4172617..4172679,4179422..4179537,4194923..4195134,4197288..4197481,4199470..4199574,4200671..4200761,4202704..4202838,4207468..4208259,4215140..4215339,4255025..4255055,4257160..4257214,4263736..4263839,4264540..4264576))
location: region:4148984-4264576:-1
so has part: feature:4264540-4264576:-1:exon
so has part: feature:4263736-4263839:-1:exon
so has part: feature:4257160-4257214:-1:exon
so has part: feature:4255025-4255055:-1:exon
so has part: feature:4215140-4215339:-1:exon
so has part: feature:4207468-4208259:-1:exon
so has part: feature:4202704-4202838:-1:exon
so has part: feature:4200671-4200761:-1:exon
so has part: feature:4199470-4199574:-1:exon
so has part: feature:4197288-4197481:-1:exon
so has part: feature:4194923-4195134:-1:exon
so has part: feature:4179422-4179537:-1:exon
so has part: feature:4172617-4172679:-1:exon
so has part: feature:4171754-4171822:-1:exon
so has part: feature:4169122-4169184:-1:exon
so has part: feature:4168713-4168793:-1:exon
so has part: feature:4167597-4167818:-1:exon
so has part: feature:4162172-4162260:-1:exon
so has part: feature:4155606-4155709:-1:exon
so has part: feature:4153568-4153711:-1:exon
so has part: feature:4148984-4151431:-1:exon

position:4264576:-1
position: 4264576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4264540-4264576:-1:exon

position:4264540:-1
position: 4264540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4263736-4263839:-1:exon

position:4263736:-1
position: 4263736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4263839:-1
position: 4263839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4257160-4257214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4255025-4255055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4215140-4215339:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4207468-4208259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4202704-4202838:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4200671-4200761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4199470-4199574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4197288-4197481:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4194923-4195134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4179422-4179537:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4172617-4172679:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4171754-4171822:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4169122-4169184:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4168713-4168793:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4167597-4167818:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4162172-4162260:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4155606-4155709:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4153568-4153711:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4148984-4151431:-1:exon

ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708329.2
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4148984..4151431,4153568..4153711,4155606..4155709,4162172..4162260,4167597..4167818,4168713..4168793,4169122..4169184,4171754..4171822,4172617..4172679,4179422..4179537,4186247..4186492,4194923..4195134,4197288..4197481,4199470..4199574,4200671..4200761,4202704..4202838,4207468..4208259,4215140..4215339,4255025..4255055,4257160..4257214,4263736..4263839,4264540..4264576))
location: region:4148984-4264576:-1
so has part: feature:4264540-4264576:-1:exon
so has part: feature:4263736-4263839:-1:exon
so has part: feature:4257160-4257214:-1:exon
so has part: feature:4255025-4255055:-1:exon
so has part: feature:4215140-4215339:-1:exon
so has part: feature:4207468-4208259:-1:exon
so has part: feature:4202704-4202838:-1:exon
so has part: feature:4200671-4200761:-1:exon
so has part: feature:4199470-4199574:-1:exon
so has part: feature:4197288-4197481:-1:exon
so has part: feature:4194923-4195134:-1:exon
so has part: feature:4186247-4186492:-1:exon
so has part: feature:4179422-4179537:-1:exon
so has part: feature:4172617-4172679:-1:exon
so has part: feature:4171754-4171822:-1:exon
so has part: feature:4169122-4169184:-1:exon
so has part: feature:4168713-4168793:-1:exon
so has part: feature:4167597-4167818:-1:exon
so has part: feature:4162172-4162260:-1:exon
so has part: feature:4155606-4155709:-1:exon
so has part: feature:4153568-4153711:-1:exon
so has part: feature:4148984-4151431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4264540-4264576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4263736-4263839:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4257160-4257214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4255025-4255055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4215140-4215339:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4207468-4208259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4202704-4202838:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4200671-4200761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4199470-4199574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4197288-4197481:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4194923-4195134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4186247-4186492:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4179422-4179537:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4172617-4172679:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4171754-4171822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4169122-4169184:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4168713-4168793:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4167597-4167818:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4162172-4162260:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4155606-4155709:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4153568-4153711:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4148984-4151431:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X2
translation: MDAEAEDKTLRTRSKGTKVPIDSLIQELSAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNLDCREECDDRTQAEEEDGFAEASDHTATEEIMIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKCPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4151291..4151431,4153568..4153711,4155606..4155709,4162172..4162260,4167597..4167818,4168713..4168793,4169122..4169184,4171754..4171822,4172617..4172679,4179422..4179537,4194923..4195134,4197288..4197481,4199470..4199574,4200671..4200761,4202704..4202838,4207468..4208259,4215140..4215339,4255025..4255055,4257160..4257214))
location: region:4151291-4257214:-1
so has part: feature:4257160-4257214:-1:exon
so has part: feature:4255025-4255055:-1:exon
so has part: feature:4215140-4215339:-1:exon
so has part: feature:4207468-4208259:-1:exon
so has part: feature:4202704-4202838:-1:exon
so has part: feature:4200671-4200761:-1:exon
so has part: feature:4199470-4199574:-1:exon
so has part: feature:4197288-4197481:-1:exon
so has part: feature:4194923-4195134:-1:exon
so has part: feature:4179422-4179537:-1:exon
so has part: feature:4172617-4172679:-1:exon
so has part: feature:4171754-4171822:-1:exon
so has part: feature:4169122-4169184:-1:exon
so has part: feature:4168713-4168793:-1:exon
so has part: feature:4167597-4167818:-1:exon
so has part: feature:4162172-4162260:-1:exon
so has part: feature:4155606-4155709:-1:exon
so has part: feature:4153568-4153711:-1:exon
so has part: feature:4151291-4151431:-1:exon

XP_025333510.1
type: Protein
SIO_000068: ncbiprotein

position:4151291:-1
position: 4151291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4257160-4257214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4255025-4255055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4215140-4215339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4207468-4208259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4202704-4202838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4200671-4200761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4199470-4199574:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4197288-4197481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4194923-4195134:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4179422-4179537:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4172617-4172679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4171754-4171822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4169122-4169184:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4168713-4168793:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4167597-4167818:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4162172-4162260:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4155606-4155709:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4153568-4153711:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4151291-4151431:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X1
translation: MDAEAEDKTLRTRSKGTKVPIDSLIQELSAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNLDCREECDDRTQAEEEDGFAEASDHTATEEIMIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKCPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSLKKNRILDKAAPLTSSNTSVPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4151291..4151431,4153568..4153711,4155606..4155709,4162172..4162260,4167597..4167818,4168713..4168793,4169122..4169184,4171754..4171822,4172617..4172679,4179422..4179537,4186247..4186492,4194923..4195134,4197288..4197481,4199470..4199574,4200671..4200761,4202704..4202838,4207468..4208259,4215140..4215339,4255025..4255055,4257160..4257214))
location: region:4151291-4257214:-1
so has part: feature:4257160-4257214:-1:exon
so has part: feature:4255025-4255055:-1:exon
so has part: feature:4215140-4215339:-1:exon
so has part: feature:4207468-4208259:-1:exon
so has part: feature:4202704-4202838:-1:exon
so has part: feature:4200671-4200761:-1:exon
so has part: feature:4199470-4199574:-1:exon
so has part: feature:4197288-4197481:-1:exon
so has part: feature:4194923-4195134:-1:exon
so has part: feature:4186247-4186492:-1:exon
so has part: feature:4179422-4179537:-1:exon
so has part: feature:4172617-4172679:-1:exon
so has part: feature:4171754-4171822:-1:exon
so has part: feature:4169122-4169184:-1:exon
so has part: feature:4168713-4168793:-1:exon
so has part: feature:4167597-4167818:-1:exon
so has part: feature:4162172-4162260:-1:exon
so has part: feature:4155606-4155709:-1:exon
so has part: feature:4153568-4153711:-1:exon
so has part: feature:4151291-4151431:-1:exon

XP_035564222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4257160-4257214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4255025-4255055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4215140-4215339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4207468-4208259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4202704-4202838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4200671-4200761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4199470-4199574:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4197288-4197481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4194923-4195134:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4186247-4186492:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4179422-4179537:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4172617-4172679:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4171754-4171822:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4169122-4169184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4168713-4168793:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4167597-4167818:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4162172-4162260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4155606-4155709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4153568-4153711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4151291-4151431:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X1
translation: MDAEAEDKTLRTRSKGTKVPIDSLIQELSAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNLDCREECDDRTQAEEEDGFAEASDHTATEEIMIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKCPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSLKKNRILDKAAPLTSSNTSVPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4151291..4151431,4153568..4153711,4155606..4155709,4162172..4162260,4167597..4167818,4168713..4168793,4169122..4169184,4171754..4171822,4172617..4172679,4179422..4179537,4186247..4186492,4194923..4195134,4197288..4197481,4199470..4199574,4200671..4200761,4202704..4202838,4207468..4208259,4215140..4215339,4255025..4255055,4257160..4257214))
location: region:4151291-4257214:-1
so has part: feature:4257160-4257214:-1:exon
so has part: feature:4255025-4255055:-1:exon
so has part: feature:4215140-4215339:-1:exon
so has part: feature:4207468-4208259:-1:exon
so has part: feature:4202704-4202838:-1:exon
so has part: feature:4200671-4200761:-1:exon
so has part: feature:4199470-4199574:-1:exon
so has part: feature:4197288-4197481:-1:exon
so has part: feature:4194923-4195134:-1:exon
so has part: feature:4186247-4186492:-1:exon
so has part: feature:4179422-4179537:-1:exon
so has part: feature:4172617-4172679:-1:exon
so has part: feature:4171754-4171822:-1:exon
so has part: feature:4169122-4169184:-1:exon
so has part: feature:4168713-4168793:-1:exon
so has part: feature:4167597-4167818:-1:exon
so has part: feature:4162172-4162260:-1:exon
so has part: feature:4155606-4155709:-1:exon
so has part: feature:4153568-4153711:-1:exon
so has part: feature:4151291-4151431:-1:exon

XP_035564228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4257160-4257214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4255025-4255055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4215140-4215339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4207468-4208259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4202704-4202838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4200671-4200761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4199470-4199574:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4197288-4197481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4194923-4195134:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4186247-4186492:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4179422-4179537:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4172617-4172679:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4171754-4171822:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4169122-4169184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4168713-4168793:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4167597-4167818:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4162172-4162260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4155606-4155709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4153568-4153711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4151291-4151431:-1:exon

LOC112678677
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678677
note: U4 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(4230305..4230495)
location: region:4230305-4230495:-1
so has part: feature:4230305-4230495:-1:exon

112678677
type: Gene
SIO_000068: ncbigene

position:4230305:-1
position: 4230305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4230495:-1
position: 4230495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230305-4230495:-1:exon

LOC112678677
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678677
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC112678677
subclass of: SO_0000673
so part of: LOC112678677
location: complement(4230305..4230495)
location: region:4230305-4230495:-1
so has part: feature:4230305-4230495:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4230305-4230495:-1:exon

LOC112678352
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678352
note: ctenidin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4425381..4425653
location: region:4425381-4425653:1
so has part: feature:4425381-4425653:1:exon
subclass of: SO_0000010

112678352
type: Gene
SIO_000068: ncbigene

position:4425381:1
position: 4425381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4425653:1
position: 4425653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4425381-4425653:1:exon

LOC112678352
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: LOC112678352
product: ctenidin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_025477664.1
SIO_010081: LOC112678352
subclass of: SO_0000673
so part of: LOC112678352
location: 4425381..4425653
location: region:4425381-4425653:1
so has part: feature:4425381-4425653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4425381-4425653:1:exon

LOC112678352
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: LOC112678352
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ctenidin-1-like
translation: MAGDAYGGCGGSDDNGGGENCGGGSGEDEVGSGGGREGGNMVRGKVGGGGGGGGKVAGCGDGVGEVDGRRMVEQLKWMVLVLVQVVTRKL
SIO_010081: LOC112678352
subclass of: SO_0000673
so part of: LOC112678352
location: 4425381..4425653
location: region:4425381-4425653:1
so has part: feature:4425381-4425653:1:exon

XP_025333449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4425381-4425653:1:exon

LOC112678437
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678437
note: general transcription factor IIH subunit 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4483802..4485820
location: region:4483802-4485820:1
so has part: feature:4483802-4485820:1:exon

112678437
type: Gene
SIO_000068: ncbigene

position:4483802:1
position: 4483802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4485820:1
position: 4485820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4483802-4485820:1:exon

LOC112678437
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678437
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC112678437
subclass of: SO_0000673
so part of: LOC112678437
location: 4483802..4485820
location: region:4483802-4485820:1
so has part: feature:4483802-4485820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4483802-4485820:1:exon

LOC112678439
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678439
note: uncharacterized LOC112678439; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4500443..4514742)
location: region:4500443-4514742:-1
so has part: feature:4500443-4514742:-1:exon
subclass of: SO_0000011

112678439
type: Gene
SIO_000068: ncbigene

position:4500443:-1
position: 4500443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4514742:-1
position: 4514742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4500443-4514742:-1:exon

LOC112678439
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC112678439
product: uncharacterized LOC112678439, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007407103.1
SIO_010081: LOC112678439
subclass of: SO_0000673
so part of: LOC112678439
location: complement(join(4500443..4500581,4503490..4503838,4504611..4505890,4506532..4506582,4513368..4513418,4514561..4514742))
location: region:4500443-4514742:-1
so has part: feature:4514561-4514742:-1:exon
so has part: feature:4513368-4513418:-1:exon
so has part: feature:4506532-4506582:-1:exon
so has part: feature:4504611-4505890:-1:exon
so has part: feature:4503490-4503838:-1:exon
so has part: feature:4500443-4500581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4514561-4514742:-1:exon

position:4514561:-1
position: 4514561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4513368-4513418:-1:exon

position:4513368:-1
position: 4513368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4513418:-1
position: 4513418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4506532-4506582:-1:exon

position:4506532:-1
position: 4506532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4506582:-1
position: 4506582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4504611-4505890:-1:exon

position:4504611:-1
position: 4504611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4505890:-1
position: 4505890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4503490-4503838:-1:exon

position:4503490:-1
position: 4503490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4503838:-1
position: 4503838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4500443-4500581:-1:exon

position:4500581:-1
position: 4500581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112678439
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC112678439
product: uncharacterized LOC112678439, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_003147580.2
SIO_010081: LOC112678439
subclass of: SO_0000673
so part of: LOC112678439
location: complement(join(4500443..4500581,4503490..4503838,4504611..4505890,4506532..4506582,4513368..4513418,4514241..4514528))
location: region:4500443-4514528:-1
so has part: feature:4514241-4514528:-1:exon
so has part: feature:4513368-4513418:-1:exon
so has part: feature:4506532-4506582:-1:exon
so has part: feature:4504611-4505890:-1:exon
so has part: feature:4503490-4503838:-1:exon
so has part: feature:4500443-4500581:-1:exon

position:4514528:-1
position: 4514528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4514241-4514528:-1:exon

position:4514241:-1
position: 4514241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4513368-4513418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4506532-4506582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4504611-4505890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4503490-4503838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4500443-4500581:-1:exon

LOC112678440
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678440
note: uncharacterized LOC112678440; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4519321..4528154)
location: region:4519321-4528154:-1
so has part: feature:4519321-4528154:-1:exon
subclass of: SO_0000011

112678440
type: Gene
SIO_000068: ncbigene

position:4519321:-1
position: 4519321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4528154:-1
position: 4528154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4519321-4528154:-1:exon

LOC112678440
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: lncRNA
gene: LOC112678440
product: uncharacterized LOC112678440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_003147581.3
SIO_010081: LOC112678440
subclass of: SO_0000673
so part of: LOC112678440
location: complement(join(4519321..4525164,4526488..4526562,4527916..4528154))
location: region:4519321-4528154:-1
so has part: feature:4527916-4528154:-1:exon
so has part: feature:4526488-4526562:-1:exon
so has part: feature:4519321-4525164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4527916-4528154:-1:exon

position:4527916:-1
position: 4527916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4526488-4526562:-1:exon

position:4526488:-1
position: 4526488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4526562:-1
position: 4526562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4519321-4525164:-1:exon

position:4525164:-1
position: 4525164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112678661
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678661
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4560644..4560747
location: region:4560644-4560747:1
so has part: feature:4560644-4560747:1:exon
subclass of: SO_0000623

112678661
type: Gene
SIO_000068: ncbigene

position:4560644:1
position: 4560644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4560747:1
position: 4560747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4560644-4560747:1:exon

LOC112678661
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 286419
nc RNA class: snRNA
gene: LOC112678661
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003147745.1
SIO_010081: LOC112678661
subclass of: SO_0000673
so part of: LOC112678661
location: 4560644..4560747
location: region:4560644-4560747:1
so has part: feature:4560644-4560747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4560644-4560747:1:exon

LOC112678388
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678388
note: ATP synthase subunit d, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4575596..4576123)
location: region:4575596-4576123:-1
so has part: feature:4575596-4576123:-1:exon

112678388
type: Gene
SIO_000068: ncbigene

position:4575596:-1
position: 4575596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4576123:-1
position: 4576123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4575596-4576123:-1:exon

LOC112678388
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678388
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC112678388
subclass of: SO_0000673
so part of: LOC112678388
location: complement(4575596..4576123)
location: region:4575596-4576123:-1
so has part: feature:4575596-4576123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4575596-4576123:-1:exon

RB1CC1
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: RB1CC1
note: RB1 inducible coiled-coil 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4620717..4718805)
location: region:4620717-4718805:-1
so has part: feature:4620717-4718805:-1:exon
subclass of: SO_0000010

112678441
type: Gene
SIO_000068: ncbigene

position:4620717:-1
position: 4620717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4718805:-1
position: 4718805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4620717-4718805:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477730.3
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4620717..4621672,4622463..4622533,4625504..4625640,4627753..4627811,4629542..4629589,4630671..4630725,4638766..4639006,4639107..4639215,4641965..4642109,4654637..4656537,4656627..4656753,4657185..4657288,4658612..4658673,4658926..4659007,4659091..4659277,4659447..4659631,4668644..4668814,4674196..4674622,4675950..4676152,4689880..4690050,4690224..4690350,4691598..4691719,4692793..4692907,4718665..4718805))
location: region:4620717-4718805:-1
so has part: feature:4718665-4718805:-1:exon
so has part: feature:4692793-4692907:-1:exon
so has part: feature:4691598-4691719:-1:exon
so has part: feature:4690224-4690350:-1:exon
so has part: feature:4689880-4690050:-1:exon
so has part: feature:4675950-4676152:-1:exon
so has part: feature:4674196-4674622:-1:exon
so has part: feature:4668644-4668814:-1:exon
so has part: feature:4659447-4659631:-1:exon
so has part: feature:4659091-4659277:-1:exon
so has part: feature:4658926-4659007:-1:exon
so has part: feature:4658612-4658673:-1:exon
so has part: feature:4657185-4657288:-1:exon
so has part: feature:4656627-4656753:-1:exon
so has part: feature:4654637-4656537:-1:exon
so has part: feature:4641965-4642109:-1:exon
so has part: feature:4639107-4639215:-1:exon
so has part: feature:4638766-4639006:-1:exon
so has part: feature:4630671-4630725:-1:exon
so has part: feature:4629542-4629589:-1:exon
so has part: feature:4627753-4627811:-1:exon
so has part: feature:4625504-4625640:-1:exon
so has part: feature:4622463-4622533:-1:exon
so has part: feature:4620717-4621672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4718665-4718805:-1:exon

position:4718665:-1
position: 4718665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4692793-4692907:-1:exon

position:4692793:-1
position: 4692793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4692907:-1
position: 4692907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4691598-4691719:-1:exon

position:4691598:-1
position: 4691598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4691719:-1
position: 4691719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4690224-4690350:-1:exon

position:4690224:-1
position: 4690224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4690350:-1
position: 4690350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4689880-4690050:-1:exon

position:4689880:-1
position: 4689880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4690050:-1
position: 4690050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4675950-4676152:-1:exon

position:4675950:-1
position: 4675950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4676152:-1
position: 4676152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4674196-4674622:-1:exon

position:4674196:-1
position: 4674196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4674622:-1
position: 4674622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4668644-4668814:-1:exon

position:4668644:-1
position: 4668644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4668814:-1
position: 4668814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4659447-4659631:-1:exon

position:4659447:-1
position: 4659447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4659631:-1
position: 4659631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4659091-4659277:-1:exon

position:4659091:-1
position: 4659091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4659277:-1
position: 4659277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4658926-4659007:-1:exon

position:4658926:-1
position: 4658926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4659007:-1
position: 4659007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4658612-4658673:-1:exon

position:4658612:-1
position: 4658612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4658673:-1
position: 4658673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4657185-4657288:-1:exon

position:4657185:-1
position: 4657185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657288:-1
position: 4657288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4656627-4656753:-1:exon

position:4656627:-1
position: 4656627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656753:-1
position: 4656753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4654637-4656537:-1:exon

position:4654637:-1
position: 4654637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656537:-1
position: 4656537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4641965-4642109:-1:exon

position:4641965:-1
position: 4641965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4642109:-1
position: 4642109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4639107-4639215:-1:exon

position:4639107:-1
position: 4639107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4639215:-1
position: 4639215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4638766-4639006:-1:exon

position:4638766:-1
position: 4638766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4639006:-1
position: 4639006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4630671-4630725:-1:exon

position:4630671:-1
position: 4630671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4630725:-1
position: 4630725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4629542-4629589:-1:exon

position:4629542:-1
position: 4629542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4629589:-1
position: 4629589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4627753-4627811:-1:exon

position:4627753:-1
position: 4627753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4627811:-1
position: 4627811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4625504-4625640:-1:exon

position:4625504:-1
position: 4625504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4625640:-1
position: 4625640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4622463-4622533:-1:exon

position:4622463:-1
position: 4622463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4622533:-1
position: 4622533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4620717-4621672:-1:exon

position:4621672:-1
position: 4621672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477729.3
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4620717..4621672,4622463..4622533,4625513..4625640,4627753..4627811,4629542..4629589,4630671..4630725,4638766..4639006,4639107..4639215,4641965..4642130,4654637..4656537,4656627..4656753,4657185..4657288,4658612..4658673,4658926..4659007,4659091..4659277,4659447..4659631,4668644..4668814,4674196..4674622,4675950..4676152,4689880..4690050,4690224..4690350,4691598..4691719,4692793..4692907,4718665..4718805))
location: region:4620717-4718805:-1
so has part: feature:4718665-4718805:-1:exon
so has part: feature:4692793-4692907:-1:exon
so has part: feature:4691598-4691719:-1:exon
so has part: feature:4690224-4690350:-1:exon
so has part: feature:4689880-4690050:-1:exon
so has part: feature:4675950-4676152:-1:exon
so has part: feature:4674196-4674622:-1:exon
so has part: feature:4668644-4668814:-1:exon
so has part: feature:4659447-4659631:-1:exon
so has part: feature:4659091-4659277:-1:exon
so has part: feature:4658926-4659007:-1:exon
so has part: feature:4658612-4658673:-1:exon
so has part: feature:4657185-4657288:-1:exon
so has part: feature:4656627-4656753:-1:exon
so has part: feature:4654637-4656537:-1:exon
so has part: feature:4641965-4642130:-1:exon
so has part: feature:4639107-4639215:-1:exon
so has part: feature:4638766-4639006:-1:exon
so has part: feature:4630671-4630725:-1:exon
so has part: feature:4629542-4629589:-1:exon
so has part: feature:4627753-4627811:-1:exon
so has part: feature:4625513-4625640:-1:exon
so has part: feature:4622463-4622533:-1:exon
so has part: feature:4620717-4621672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4718665-4718805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4692793-4692907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4691598-4691719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4690224-4690350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4689880-4690050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4675950-4676152:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4674196-4674622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4668644-4668814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4659447-4659631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4659091-4659277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4658926-4659007:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4658612-4658673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4657185-4657288:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4656627-4656753:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4654637-4656537:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4641965-4642130:-1:exon

position:4642130:-1
position: 4642130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4639107-4639215:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4638766-4639006:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4630671-4630725:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4629542-4629589:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4627753-4627811:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4625513-4625640:-1:exon

position:4625513:-1
position: 4625513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4622463-4622533:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4620717-4621672:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477727.3
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4620717..4621672,4622463..4622533,4625504..4625640,4627753..4627811,4629542..4629589,4630671..4630725,4638766..4639006,4639107..4639215,4641965..4642130,4654637..4656537,4656627..4656753,4657185..4657288,4658612..4658673,4658926..4659007,4659091..4659277,4659447..4659631,4668644..4668814,4674196..4674622,4675950..4676152,4689880..4690050,4690224..4690350,4691598..4691719,4692793..4692907,4718665..4718805))
location: region:4620717-4718805:-1
so has part: feature:4718665-4718805:-1:exon
so has part: feature:4692793-4692907:-1:exon
so has part: feature:4691598-4691719:-1:exon
so has part: feature:4690224-4690350:-1:exon
so has part: feature:4689880-4690050:-1:exon
so has part: feature:4675950-4676152:-1:exon
so has part: feature:4674196-4674622:-1:exon
so has part: feature:4668644-4668814:-1:exon
so has part: feature:4659447-4659631:-1:exon
so has part: feature:4659091-4659277:-1:exon
so has part: feature:4658926-4659007:-1:exon
so has part: feature:4658612-4658673:-1:exon
so has part: feature:4657185-4657288:-1:exon
so has part: feature:4656627-4656753:-1:exon
so has part: feature:4654637-4656537:-1:exon
so has part: feature:4641965-4642130:-1:exon
so has part: feature:4639107-4639215:-1:exon
so has part: feature:4638766-4639006:-1:exon
so has part: feature:4630671-4630725:-1:exon
so has part: feature:4629542-4629589:-1:exon
so has part: feature:4627753-4627811:-1:exon
so has part: feature:4625504-4625640:-1:exon
so has part: feature:4622463-4622533:-1:exon
so has part: feature:4620717-4621672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4718665-4718805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4692793-4692907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4691598-4691719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4690224-4690350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4689880-4690050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4675950-4676152:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4674196-4674622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4668644-4668814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4659447-4659631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4659091-4659277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4658926-4659007:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4658612-4658673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4657185-4657288:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4656627-4656753:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4654637-4656537:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4641965-4642130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4639107-4639215:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4638766-4639006:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4630671-4630725:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4629542-4629589:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4627753-4627811:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4625504-4625640:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4622463-4622533:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4620717-4621672:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708324.2
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4620717..4621672,4622463..4622533,4625504..4625640,4627753..4627811,4629542..4629589,4630671..4630725,4638766..4639006,4639107..4639215,4641965..4642130,4654637..4656537,4656627..4656753,4657185..4657288,4658612..4658673,4658926..4659007,4659091..4659277,4659447..4659631,4668644..4668814,4674196..4674622,4675950..4676152,4689880..4690050,4690224..4690350,4691598..4691719,4692793..4692907,4704852..4704935,4718665..4718805))
location: region:4620717-4718805:-1
so has part: feature:4718665-4718805:-1:exon
so has part: feature:4704852-4704935:-1:exon
so has part: feature:4692793-4692907:-1:exon
so has part: feature:4691598-4691719:-1:exon
so has part: feature:4690224-4690350:-1:exon
so has part: feature:4689880-4690050:-1:exon
so has part: feature:4675950-4676152:-1:exon
so has part: feature:4674196-4674622:-1:exon
so has part: feature:4668644-4668814:-1:exon
so has part: feature:4659447-4659631:-1:exon
so has part: feature:4659091-4659277:-1:exon
so has part: feature:4658926-4659007:-1:exon
so has part: feature:4658612-4658673:-1:exon
so has part: feature:4657185-4657288:-1:exon
so has part: feature:4656627-4656753:-1:exon
so has part: feature:4654637-4656537:-1:exon
so has part: feature:4641965-4642130:-1:exon
so has part: feature:4639107-4639215:-1:exon
so has part: feature:4638766-4639006:-1:exon
so has part: feature:4630671-4630725:-1:exon
so has part: feature:4629542-4629589:-1:exon
so has part: feature:4627753-4627811:-1:exon
so has part: feature:4625504-4625640:-1:exon
so has part: feature:4622463-4622533:-1:exon
so has part: feature:4620717-4621672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4718665-4718805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4704852-4704935:-1:exon

position:4704852:-1
position: 4704852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4704935:-1
position: 4704935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4692793-4692907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4691598-4691719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4690224-4690350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4689880-4690050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4675950-4676152:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4674196-4674622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4668644-4668814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4659447-4659631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4659091-4659277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4658926-4659007:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4658612-4658673:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4657185-4657288:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4656627-4656753:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4654637-4656537:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4641965-4642130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4639107-4639215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4638766-4639006:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4630671-4630725:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4629542-4629589:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4627753-4627811:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4625504-4625640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4622463-4622533:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4620717-4621672:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X3
translation: MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTELVLSPDMPRATNQSLLTSFHKSVEHIAPDTTDAEIGKEIRESCQNTVQQDETSVDAKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASISQTSPQSASSPRIESTTGIATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNICGKEDLGDHTSLNVQLERCRVVAQDSNFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTALEIRNIIEKVKYSLEITLSEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVCLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLEDLKKLHVENDEKMQLLRTELQCLEQSHLKELEDTLQFRHTQEFEKVMTDHRVSLEKLKKENQQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLKAELNKVTSLHQQAFEIEKNLKEEIVELQSKLDAELSALEKQKDEKLTQQEEKYEAIIQKLEKDKEKFVMSKEQDREQLIQKLNCEKEEAIQTALKEFKLEKEAVEKELLEKVKHLEDQIAKREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETSMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4621595..4621672,4622463..4622533,4625504..4625640,4627753..4627811,4629542..4629589,4630671..4630725,4638766..4639006,4639107..4639215,4641965..4642109,4654637..4656537,4656627..4656753,4657185..4657288,4658612..4658673,4658926..4659007,4659091..4659277,4659447..4659631,4668644..4668814,4674196..4674622,4675950..4676152,4689880..4690050,4690224..4690350,4691598..4691668))
location: region:4621595-4691668:-1
so has part: feature:4691598-4691668:-1:exon
so has part: feature:4690224-4690350:-1:exon
so has part: feature:4689880-4690050:-1:exon
so has part: feature:4675950-4676152:-1:exon
so has part: feature:4674196-4674622:-1:exon
so has part: feature:4668644-4668814:-1:exon
so has part: feature:4659447-4659631:-1:exon
so has part: feature:4659091-4659277:-1:exon
so has part: feature:4658926-4659007:-1:exon
so has part: feature:4658612-4658673:-1:exon
so has part: feature:4657185-4657288:-1:exon
so has part: feature:4656627-4656753:-1:exon
so has part: feature:4654637-4656537:-1:exon
so has part: feature:4641965-4642109:-1:exon
so has part: feature:4639107-4639215:-1:exon
so has part: feature:4638766-4639006:-1:exon
so has part: feature:4630671-4630725:-1:exon
so has part: feature:4629542-4629589:-1:exon
so has part: feature:4627753-4627811:-1:exon
so has part: feature:4625504-4625640:-1:exon
so has part: feature:4622463-4622533:-1:exon
so has part: feature:4621595-4621672:-1:exon

XP_025333515.1
type: Protein
SIO_000068: ncbiprotein

position:4621595:-1
position: 4621595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4691668:-1
position: 4691668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4691598-4691668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4690224-4690350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4689880-4690050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4675950-4676152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4674196-4674622:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4668644-4668814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4659447-4659631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4659091-4659277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4658926-4659007:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4658612-4658673:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4657185-4657288:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4656627-4656753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4654637-4656537:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4641965-4642109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4639107-4639215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4638766-4639006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4630671-4630725:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4629542-4629589:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4627753-4627811:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4625504-4625640:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4622463-4622533:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4621595-4621672:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X2
translation: MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTELVLSPDMPRATNQSLLTSFHKSVEHIAPDTTDAEIGKEIRESCQNTVQQDETSVDAKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASISQTSPQSASSPRIESTTGIATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNICGKEDLGDHTSLNVQLERCRVVAQDSNFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTALEIRNIIEKVKYSLEITLSEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVCLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLEDLKKLHVENDEKMQLLRTELQCLEQSHLKELEDTLQFRHTQEFEKVMTDHRVSLEKLKKENQQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLKAELNKVTSLHQQAFEIEKNLKEEIVELQSKLDAELSALEKQKDEKLTQQEEKYEAIIQKLEKDKEKFVMSKEQDREQLIQKLNCEKEEAIQTALKEFKLEKEAVEKELLEKVKHLEDQIAKSLAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETSMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4621595..4621672,4622463..4622533,4625513..4625640,4627753..4627811,4629542..4629589,4630671..4630725,4638766..4639006,4639107..4639215,4641965..4642130,4654637..4656537,4656627..4656753,4657185..4657288,4658612..4658673,4658926..4659007,4659091..4659277,4659447..4659631,4668644..4668814,4674196..4674622,4675950..4676152,4689880..4690050,4690224..4690350,4691598..4691668))
location: region:4621595-4691668:-1
so has part: feature:4691598-4691668:-1:exon
so has part: feature:4690224-4690350:-1:exon
so has part: feature:4689880-4690050:-1:exon
so has part: feature:4675950-4676152:-1:exon
so has part: feature:4674196-4674622:-1:exon
so has part: feature:4668644-4668814:-1:exon
so has part: feature:4659447-4659631:-1:exon
so has part: feature:4659091-4659277:-1:exon
so has part: feature:4658926-4659007:-1:exon
so has part: feature:4658612-4658673:-1:exon
so has part: feature:4657185-4657288:-1:exon
so has part: feature:4656627-4656753:-1:exon
so has part: feature:4654637-4656537:-1:exon
so has part: feature:4641965-4642130:-1:exon
so has part: feature:4639107-4639215:-1:exon
so has part: feature:4638766-4639006:-1:exon
so has part: feature:4630671-4630725:-1:exon
so has part: feature:4629542-4629589:-1:exon
so has part: feature:4627753-4627811:-1:exon
so has part: feature:4625513-4625640:-1:exon
so has part: feature:4622463-4622533:-1:exon
so has part: feature:4621595-4621672:-1:exon

XP_025333514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4691598-4691668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4690224-4690350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4689880-4690050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4675950-4676152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4674196-4674622:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4668644-4668814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4659447-4659631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4659091-4659277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4658926-4659007:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4658612-4658673:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4657185-4657288:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4656627-4656753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4654637-4656537:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4641965-4642130:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4639107-4639215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4638766-4639006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4630671-4630725:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4629542-4629589:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4627753-4627811:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4625513-4625640:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4622463-4622533:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4621595-4621672:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X1
translation: MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTELVLSPDMPRATNQSLLTSFHKSVEHIAPDTTDAEIGKEIRESCQNTVQQDETSVDAKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASISQTSPQSASSPRIESTTGIATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNICGKEDLGDHTSLNVQLERCRVVAQDSNFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTALEIRNIIEKVKYSLEITLSEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVCLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLEDLKKLHVENDEKMQLLRTELQCLEQSHLKELEDTLQFRHTQEFEKVMTDHRVSLEKLKKENQQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLKAELNKVTSLHQQAFEIEKNLKEEIVELQSKLDAELSALEKQKDEKLTQQEEKYEAIIQKLEKDKEKFVMSKEQDREQLIQKLNCEKEEAIQTALKEFKLEKEAVEKELLEKVKHLEDQIAKSLAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETSMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4621595..4621672,4622463..4622533,4625504..4625640,4627753..4627811,4629542..4629589,4630671..4630725,4638766..4639006,4639107..4639215,4641965..4642130,4654637..4656537,4656627..4656753,4657185..4657288,4658612..4658673,4658926..4659007,4659091..4659277,4659447..4659631,4668644..4668814,4674196..4674622,4675950..4676152,4689880..4690050,4690224..4690350,4691598..4691668))
location: region:4621595-4691668:-1
so has part: feature:4691598-4691668:-1:exon
so has part: feature:4690224-4690350:-1:exon
so has part: feature:4689880-4690050:-1:exon
so has part: feature:4675950-4676152:-1:exon
so has part: feature:4674196-4674622:-1:exon
so has part: feature:4668644-4668814:-1:exon
so has part: feature:4659447-4659631:-1:exon
so has part: feature:4659091-4659277:-1:exon
so has part: feature:4658926-4659007:-1:exon
so has part: feature:4658612-4658673:-1:exon
so has part: feature:4657185-4657288:-1:exon
so has part: feature:4656627-4656753:-1:exon
so has part: feature:4654637-4656537:-1:exon
so has part: feature:4641965-4642130:-1:exon
so has part: feature:4639107-4639215:-1:exon
so has part: feature:4638766-4639006:-1:exon
so has part: feature:4630671-4630725:-1:exon
so has part: feature:4629542-4629589:-1:exon
so has part: feature:4627753-4627811:-1:exon
so has part: feature:4625504-4625640:-1:exon
so has part: feature:4622463-4622533:-1:exon
so has part: feature:4621595-4621672:-1:exon

XP_025333512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4691598-4691668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4690224-4690350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4689880-4690050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4675950-4676152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4674196-4674622:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4668644-4668814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4659447-4659631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4659091-4659277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4658926-4659007:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4658612-4658673:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4657185-4657288:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4656627-4656753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4654637-4656537:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4641965-4642130:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4639107-4639215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4638766-4639006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4630671-4630725:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4629542-4629589:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4627753-4627811:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4625504-4625640:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4622463-4622533:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4621595-4621672:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X1
translation: MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTELVLSPDMPRATNQSLLTSFHKSVEHIAPDTTDAEIGKEIRESCQNTVQQDETSVDAKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASISQTSPQSASSPRIESTTGIATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNICGKEDLGDHTSLNVQLERCRVVAQDSNFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTALEIRNIIEKVKYSLEITLSEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVCLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLEDLKKLHVENDEKMQLLRTELQCLEQSHLKELEDTLQFRHTQEFEKVMTDHRVSLEKLKKENQQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLKAELNKVTSLHQQAFEIEKNLKEEIVELQSKLDAELSALEKQKDEKLTQQEEKYEAIIQKLEKDKEKFVMSKEQDREQLIQKLNCEKEEAIQTALKEFKLEKEAVEKELLEKVKHLEDQIAKSLAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETSMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4621595..4621672,4622463..4622533,4625504..4625640,4627753..4627811,4629542..4629589,4630671..4630725,4638766..4639006,4639107..4639215,4641965..4642130,4654637..4656537,4656627..4656753,4657185..4657288,4658612..4658673,4658926..4659007,4659091..4659277,4659447..4659631,4668644..4668814,4674196..4674622,4675950..4676152,4689880..4690050,4690224..4690350,4691598..4691668))
location: region:4621595-4691668:-1
so has part: feature:4691598-4691668:-1:exon
so has part: feature:4690224-4690350:-1:exon
so has part: feature:4689880-4690050:-1:exon
so has part: feature:4675950-4676152:-1:exon
so has part: feature:4674196-4674622:-1:exon
so has part: feature:4668644-4668814:-1:exon
so has part: feature:4659447-4659631:-1:exon
so has part: feature:4659091-4659277:-1:exon
so has part: feature:4658926-4659007:-1:exon
so has part: feature:4658612-4658673:-1:exon
so has part: feature:4657185-4657288:-1:exon
so has part: feature:4656627-4656753:-1:exon
so has part: feature:4654637-4656537:-1:exon
so has part: feature:4641965-4642130:-1:exon
so has part: feature:4639107-4639215:-1:exon
so has part: feature:4638766-4639006:-1:exon
so has part: feature:4630671-4630725:-1:exon
so has part: feature:4629542-4629589:-1:exon
so has part: feature:4627753-4627811:-1:exon
so has part: feature:4625504-4625640:-1:exon
so has part: feature:4622463-4622533:-1:exon
so has part: feature:4621595-4621672:-1:exon

XP_035564217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4691598-4691668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4690224-4690350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4689880-4690050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4675950-4676152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4674196-4674622:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4668644-4668814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4659447-4659631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4659091-4659277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4658926-4659007:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4658612-4658673:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4657185-4657288:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4656627-4656753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4654637-4656537:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4641965-4642130:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4639107-4639215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4638766-4639006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4630671-4630725:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4629542-4629589:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4627753-4627811:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4625504-4625640:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4622463-4622533:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4621595-4621672:-1:exon

LOC125753964
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC125753964
note: collagen alpha-1(I) chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4717945..4841433
location: region:4717945-4841433:1
so has part: feature:4717945-4841433:1:exon
subclass of: SO_0000010

125753964
type: Gene
SIO_000068: ncbigene

position:4717945:1
position: 4717945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4841433:1
position: 4841433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4717945-4841433:1:exon

LOC125753964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: LOC125753964
product: collagen alpha-1(I) chain-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103733.1
SIO_010081: LOC125753964
subclass of: SO_0000673
so part of: LOC125753964
location: join(4717945..4718090,4718160..4718426,4718505..4719744,4775148..4775204,4776270..4776389,4831041..4831166,4840223..4841433)
location: region:4717945-4841433:1
so has part: feature:4717945-4718090:1:exon
so has part: feature:4718160-4718426:1:exon
so has part: feature:4718505-4719744:1:exon
so has part: feature:4775148-4775204:1:exon
so has part: feature:4776270-4776389:1:exon
so has part: feature:4831041-4831166:1:exon
so has part: feature:4840223-4841433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4717945-4718090:1:exon

position:4718090:1
position: 4718090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4718160-4718426:1:exon

position:4718160:1
position: 4718160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4718426:1
position: 4718426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4718505-4719744:1:exon

position:4718505:1
position: 4718505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4719744:1
position: 4719744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4775148-4775204:1:exon

position:4775148:1
position: 4775148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4775204:1
position: 4775204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4776270-4776389:1:exon

position:4776270:1
position: 4776270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4776389:1
position: 4776389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4831041-4831166:1:exon

position:4831041:1
position: 4831041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4831166:1
position: 4831166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4840223-4841433:1:exon

position:4840223:1
position: 4840223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125753964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: LOC125753964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain-like
translation: MTTLSRVMMEKTRLRNHNNKHSTSTRRWKKLFPSKAAISPVLLLLLRKLSNFIPIALRGRDKGILRSSRCALRSASAQFRSPVSQVRDGVKATPATVTTRQEAASLALRRSESRIAESRLARGADREGPRGRRHGSRTGRRARAAAAGQHLPRPDAHTPARGRRPRPTAPELAEQPRSQMGEGATGGDGTHLAAPPPLPVAAAEPAAPGTIFRRRLLLGGGYQPPIGHRQPTQPPASRVPVTAPDSGREGGVGAEGVSCQAPRLWVGGRESGGRGRSEPRGRSDAGTRRQRRGLGRAADSAAVGFVIVDSVPSSAEHAGKRWAGGGARRATRAVRGGARRSGSRRAAGKGAAPPTAAVGPPGTRLSSGDPGRPRGGLWRCERRRPGACCPKVILTFLLQRVGLSCADPAGFWISPRFKSLRVCPPVAEEPGTPRFRALVSGPPPGPGSMPGQASPPPTPTPTPTPTATPAAAPASSP
SIO_010081: LOC125753964
subclass of: SO_0000673
so part of: LOC125753964
location: join(4717945..4718090,4718160..4718426,4718505..4719525)
location: region:4717945-4719525:1
so has part: feature:4717945-4718090:1:exon
so has part: feature:4718160-4718426:1:exon
so has part: feature:4718505-4719525:1:exon

XP_048959690.1
type: Protein
SIO_000068: ncbiprotein

position:4719525:1
position: 4719525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4717945-4718090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4718160-4718426:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4718505-4719525:1:exon

LOC112678354
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678354
note: meiotic nuclear division protein 1 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4809953..4811758)
location: region:4809953-4811758:-1
so has part: feature:4809953-4811758:-1:exon

112678354
type: Gene
SIO_000068: ncbigene

position:4809953:-1
position: 4809953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4811758:-1
position: 4811758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4809953-4811758:-1:exon

LOC112678354
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678354
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC112678354
subclass of: SO_0000673
so part of: LOC112678354
location: complement(4809953..4810242)
location: region:4809953-4810242:-1
so has part: feature:4809953-4810242:-1:exon

position:4810242:-1
position: 4810242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4809953-4810242:-1:exon

LOC112678354
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678354
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC112678354
subclass of: SO_0000673
so part of: LOC112678354
location: complement(4810678..4810983)
location: region:4810678-4810983:-1
so has part: feature:4810678-4810983:-1:exon

position:4810678:-1
position: 4810678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4810983:-1
position: 4810983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4810678-4810983:-1:exon

LOC112678354
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678354
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC112678354
subclass of: SO_0000673
so part of: LOC112678354
location: complement(4811718..4811758)
location: region:4811718-4811758:-1
so has part: feature:4811718-4811758:-1:exon

position:4811718:-1
position: 4811718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4811718-4811758:-1:exon

LOC112678355
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678355
note: 40S ribosomal protein SA-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4826051..4827226
location: region:4826051-4827226:1
so has part: feature:4826051-4827226:1:exon

112678355
type: Gene
SIO_000068: ncbigene

position:4826051:1
position: 4826051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4827226:1
position: 4827226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4826051-4827226:1:exon

LOC112678355
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678355
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC112678355
subclass of: SO_0000673
so part of: LOC112678355
location: 4826051..4826710
location: region:4826051-4826710:1
so has part: feature:4826051-4826710:1:exon

position:4826710:1
position: 4826710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4826051-4826710:1:exon

LOC112678355
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678355
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC112678355
subclass of: SO_0000673
so part of: LOC112678355
location: 4826921..4827226
location: region:4826921-4827226:1
so has part: feature:4826921-4827226:1:exon

position:4826921:1
position: 4826921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4826921-4827226:1:exon

LOC112678443
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678443
note: heat shock cognate 71 kDa protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4846055..4848215
location: region:4846055-4848215:1
so has part: feature:4846055-4848215:1:exon

112678443
type: Gene
SIO_000068: ncbigene

position:4846055:1
position: 4846055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4848215:1
position: 4848215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4846055-4848215:1:exon

LOC112678443
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678443
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC112678443
subclass of: SO_0000673
so part of: LOC112678443
location: 4846055..4848215
location: region:4846055-4848215:1
so has part: feature:4846055-4848215:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4846055-4848215:1:exon

NPBWR1
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: NPBWR1
note: neuropeptides B and W receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4954280..4959053
location: region:4954280-4959053:1
so has part: feature:4954280-4959053:1:exon
subclass of: SO_0000010

112678444
type: Gene
SIO_000068: ncbigene

position:4954280:1
position: 4954280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4959053:1
position: 4959053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4954280-4959053:1:exon

NPBWR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: NPBWR1
product: neuropeptides B and W receptor 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103885.1
SIO_010081: NPBWR1
subclass of: SO_0000673
so part of: NPBWR1
location: 4954280..4959053
location: region:4954280-4959053:1
so has part: feature:4954280-4959053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4954280-4959053:1:exon

NPBWR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: NPBWR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropeptides B/W receptor type 1
translation: MHNGSSSEPGPTNTSCWGPAPGCPNASSPPPPPPLPPPLAVAVPVVYAVICAVGLAGNSAVLYVLLRAPRTKTVTNLFILNLAVADELFTLVLPINIADFLLQQWPFGELMCKLIVAIDQYNTFSSLYFLTVMSADRYLVVLATAESRRVAGRTYSAARAVSLAVWGLVTLVVLPFAVFARLDDEQGRLQCVLVFPQPEAFWWRASRLYTLVLGFAIPVSTICVLYSILLCRLRAMRLDSHARALDRAKKRVTLLVVAILAACLLCWTPYHLSTVVALTTDLPQTPLVIAVSYFITSLSYANSCLNPFLYAFLDDSFRKSLRQLLACRAAA
SIO_010081: NPBWR1
subclass of: SO_0000673
so part of: NPBWR1
location: 4954897..4955892
location: region:4954897-4955892:1
so has part: feature:4954897-4955892:1:exon

XP_048959842.1
type: Protein
SIO_000068: ncbiprotein

position:4954897:1
position: 4954897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4955892:1
position: 4955892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4954897-4955892:1:exon

LOC112678356
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678356
note: etoposide-induced protein 2.4 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5169172..5170019
location: region:5169172-5170019:1
so has part: feature:5169172-5170019:1:exon

112678356
type: Gene
SIO_000068: ncbigene

position:5169172:1
position: 5169172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5170019:1
position: 5170019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5169172-5170019:1:exon

LOC112678356
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678356
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC112678356
subclass of: SO_0000673
so part of: LOC112678356
location: 5169172..5170019
location: region:5169172-5170019:1
so has part: feature:5169172-5170019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5169172-5170019:1:exon

OPRK1
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: OPRK1
note: opioid receptor kappa 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5201034..5231195)
location: region:5201034-5231195:-1
so has part: feature:5201034-5231195:-1:exon
subclass of: SO_0000010

112678445
type: Gene
SIO_000068: ncbigene

position:5201034:-1
position: 5201034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5231195:-1
position: 5231195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5201034-5231195:-1:exon

OPRK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: OPRK1
product: opioid receptor kappa 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477732.3
SIO_010081: OPRK1
subclass of: SO_0000673
so part of: OPRK1
location: complement(join(5201034..5205087,5215054..5215406,5230345..5230641,5231038..5231195))
location: region:5201034-5231195:-1
so has part: feature:5231038-5231195:-1:exon
so has part: feature:5230345-5230641:-1:exon
so has part: feature:5215054-5215406:-1:exon
so has part: feature:5201034-5205087:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5231038-5231195:-1:exon

position:5231038:-1
position: 5231038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5230345-5230641:-1:exon

position:5230345:-1
position: 5230345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5230641:-1
position: 5230641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5215054-5215406:-1:exon

position:5215054:-1
position: 5215054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5215406:-1
position: 5215406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5201034-5205087:-1:exon

position:5205087:-1
position: 5205087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OPRK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: OPRK1
product: opioid receptor kappa 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708350.2
SIO_010081: OPRK1
subclass of: SO_0000673
so part of: OPRK1
location: complement(join(5201034..5205087,5215054..5215406,5230345..5230781))
location: region:5201034-5230781:-1
so has part: feature:5230345-5230781:-1:exon
so has part: feature:5215054-5215406:-1:exon
so has part: feature:5201034-5205087:-1:exon

position:5230781:-1
position: 5230781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5230345-5230781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5215054-5215406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5201034-5205087:-1:exon

OPRK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: OPRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kappa-type opioid receptor
translation: MESPVQIFRGEPGPTCSASTCLLPNGSGWLPGWAETEGNHSGGSEGAQLESAHISPAIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPMKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPVLIIIICYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFIICWTPIHIFILVEALGNASHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPIKMRMERQSTSRVRNTVQDPAYMRDVDGLNKPV
SIO_010081: OPRK1
subclass of: SO_0000673
so part of: OPRK1
location: complement(join(5204555..5205087,5215054..5215406,5230345..5230601))
location: region:5204555-5230601:-1
so has part: feature:5230345-5230601:-1:exon
so has part: feature:5215054-5215406:-1:exon
so has part: feature:5204555-5205087:-1:exon

XP_025333517.1
type: Protein
SIO_000068: ncbiprotein

position:5204555:-1
position: 5204555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5230601:-1
position: 5230601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5230345-5230601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5215054-5215406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5204555-5205087:-1:exon

OPRK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 286419
gene: OPRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kappa-type opioid receptor
translation: MESPVQIFRGEPGPTCSASTCLLPNGSGWLPGWAETEGNHSGGSEGAQLESAHISPAIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPMKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPVLIIIICYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFIICWTPIHIFILVEALGNASHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPIKMRMERQSTSRVRNTVQDPAYMRDVDGLNKPV
SIO_010081: OPRK1
subclass of: SO_0000673
so part of: OPRK1
location: complement(join(5204555..5205087,5215054..5215406,5230345..5230601))
location: region:5204555-5230601:-1
so has part: feature:5230345-5230601:-1:exon
so has part: feature:5215054-5215406:-1:exon
so has part: feature:5204555-5205087:-1:exon

XP_035564243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5230345-5230601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5215054-5215406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5204555-5205087:-1:exon

LOC112678357
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: LOC112678357
note: CREB-regulated transcription coactivator 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5518986..5520613
location: region:5518986-5520613:1
so has part: feature:5518986-5520613:1:exon

112678357
type: Gene
SIO_000068: ncbigene

position:5518986:1
position: 5518986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5520613:1
position: 5520613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5518986-5520613:1:exon

LOC112678357
type: Exon
subclass of: SO_0000147
RO_0002162: 286419
gene: LOC112678357
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC112678357
subclass of: SO_0000673
so part of: LOC112678357
location: 5518986..5520613
location: region:5518986-5520613:1
so has part: feature:5518986-5520613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5518986-5520613:1:exon

ATP6V1H
type: Gene
subclass of: SO_0000704
RO_0002162: 286419
gene: ATP6V1H
note: ATPase H+ transporting V1 subunit H; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5562714..5725619)
location: region:5562714-5725619:-1
so has part: feature:5562714-5725619:-1:exon
subclass of: SO_0000010

112678446
type: Gene
SIO_000068: ncbigene

position:5562714:-1
position: 5562714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5725619:-1
position: 5725619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5562714-5725619:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477734.3
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5562714..5563075,5599429..5599542,5615269..5615370,5630847..5630972,5633639..5633817,5645297..5645489,5650706..5650803,5665491..5665544,5668835..5668939,5672017..5672130,5679319..5679408,5680368..5680470,5687575..5687722,5724568..5724627,5725489..5725619))
location: region:5562714-5725619:-1
so has part: feature:5725489-5725619:-1:exon
so has part: feature:5724568-5724627:-1:exon
so has part: feature:5687575-5687722:-1:exon
so has part: feature:5680368-5680470:-1:exon
so has part: feature:5679319-5679408:-1:exon
so has part: feature:5672017-5672130:-1:exon
so has part: feature:5668835-5668939:-1:exon
so has part: feature:5665491-5665544:-1:exon
so has part: feature:5650706-5650803:-1:exon
so has part: feature:5645297-5645489:-1:exon
so has part: feature:5633639-5633817:-1:exon
so has part: feature:5630847-5630972:-1:exon
so has part: feature:5615269-5615370:-1:exon
so has part: feature:5599429-5599542:-1:exon
so has part: feature:5562714-5563075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5725489-5725619:-1:exon

position:5725489:-1
position: 5725489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5724568-5724627:-1:exon

position:5724568:-1
position: 5724568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5724627:-1
position: 5724627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5687575-5687722:-1:exon

position:5687575:-1
position: 5687575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5687722:-1
position: 5687722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5680368-5680470:-1:exon

position:5680368:-1
position: 5680368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5680470:-1
position: 5680470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5679319-5679408:-1:exon

position:5679319:-1
position: 5679319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5679408:-1
position: 5679408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5672017-5672130:-1:exon

position:5672017:-1
position: 5672017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5672130:-1
position: 5672130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5668835-5668939:-1:exon

position:5668835:-1
position: 5668835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5668939:-1
position: 5668939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5665491-5665544:-1:exon

position:5665491:-1
position: 5665491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5665544:-1
position: 5665544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5650706-5650803:-1:exon

position:5650706:-1
position: 5650706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5650803:-1
position: 5650803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5645297-5645489:-1:exon

position:5645297:-1
position: 5645297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5645489:-1
position: 5645489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5633639-5633817:-1:exon

position:5633639:-1
position: 5633639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5633817:-1
position: 5633817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5630847-5630972:-1:exon

position:5630847:-1
position: 5630847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5630972:-1
position: 5630972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5615269-5615370:-1:exon

position:5615269:-1
position: 5615269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5615370:-1
position: 5615370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5599429-5599542:-1:exon

position:5599429:-1
position: 5599429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5599542:-1
position: 5599542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5562714-5563075:-1:exon

position:5563075:-1
position: 5563075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035708351.2
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5562714..5563075,5599429..5599542,5615269..5615370,5630847..5630972,5633639..5633817,5645297..5645489,5650706..5650803,5665491..5665544,5668835..5668939,5672017..5672130,5679319..5679408,5680368..5680470,5687575..5687722,5723844..5723943))
location: region:5562714-5723943:-1
so has part: feature:5723844-5723943:-1:exon
so has part: feature:5687575-5687722:-1:exon
so has part: feature:5680368-5680470:-1:exon
so has part: feature:5679319-5679408:-1:exon
so has part: feature:5672017-5672130:-1:exon
so has part: feature:5668835-5668939:-1:exon
so has part: feature:5665491-5665544:-1:exon
so has part: feature:5650706-5650803:-1:exon
so has part: feature:5645297-5645489:-1:exon
so has part: feature:5633639-5633817:-1:exon
so has part: feature:5630847-5630972:-1:exon
so has part: feature:5615269-5615370:-1:exon
so has part: feature:5599429-5599542:-1:exon
so has part: feature:5562714-5563075:-1:exon

position:5723943:-1
position: 5723943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5723844-5723943:-1:exon

position:5723844:-1
position: 5723844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5687575-5687722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5680368-5680470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5679319-5679408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5672017-5672130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5668835-5668939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5665491-5665544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5650706-5650803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5645297-5645489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5633639-5633817:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5630847-5630972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5615269-5615370:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5599429-5599542:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5562714-5563075:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477733.3
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5562714..5563075,5599429..5599542,5615269..5615370,5630847..5630972,5633639..5633817,5645297..5645489,5650706..5650803,5665491..5665544,5668835..5668939,5672017..5672130,5679319..5679408,5680368..5680470,5687575..5687722,5689091..5689344))
location: region:5562714-5689344:-1
so has part: feature:5689091-5689344:-1:exon
so has part: feature:5687575-5687722:-1:exon
so has part: feature:5680368-5680470:-1:exon
so has part: feature:5679319-5679408:-1:exon
so has part: feature:5672017-5672130:-1:exon
so has part: feature:5668835-5668939:-1:exon
so has part: feature:5665491-5665544:-1:exon
so has part: feature:5650706-5650803:-1:exon
so has part: feature:5645297-5645489:-1:exon
so has part: feature:5633639-5633817:-1:exon
so has part: feature:5630847-5630972:-1:exon
so has part: feature:5615269-5615370:-1:exon
so has part: feature:5599429-5599542:-1:exon
so has part: feature:5562714-5563075:-1:exon

position:5689344:-1
position: 5689344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5689091-5689344:-1:exon

position:5689091:-1
position: 5689091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5687575-5687722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5680368-5680470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5679319-5679408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5672017-5672130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5668835-5668939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5665491-5665544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5650706-5650803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5645297-5645489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5633639-5633817:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5630847-5630972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5615269-5615370:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5599429-5599542:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5562714-5563075:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477736.3
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5562714..5563075,5615269..5615370,5630847..5630972,5633639..5633817,5645297..5645489,5650706..5650803,5665491..5665544,5668835..5668939,5672017..5672130,5679319..5679408,5680368..5680470,5687575..5687722,5689091..5689332))
location: region:5562714-5689332:-1
so has part: feature:5689091-5689332:-1:exon
so has part: feature:5687575-5687722:-1:exon
so has part: feature:5680368-5680470:-1:exon
so has part: feature:5679319-5679408:-1:exon
so has part: feature:5672017-5672130:-1:exon
so has part: feature:5668835-5668939:-1:exon
so has part: feature:5665491-5665544:-1:exon
so has part: feature:5650706-5650803:-1:exon
so has part: feature:5645297-5645489:-1:exon
so has part: feature:5633639-5633817:-1:exon
so has part: feature:5630847-5630972:-1:exon
so has part: feature:5615269-5615370:-1:exon
so has part: feature:5562714-5563075:-1:exon

position:5689332:-1
position: 5689332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5689091-5689332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5687575-5687722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5680368-5680470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5679319-5679408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5672017-5672130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5668835-5668939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5665491-5665544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5650706-5650803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5645297-5645489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5633639-5633817:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5630847-5630972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5615269-5615370:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5562714-5563075:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049103903.1
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5562714..5563075,5615269..5615370,5630847..5630972,5633639..5633817,5645297..5645489,5650706..5650803,5668835..5668939,5672017..5672130,5679319..5679408,5680368..5680470,5687575..5687722,5689091..5689318))
location: region:5562714-5689318:-1
so has part: feature:5689091-5689318:-1:exon
so has part: feature:5687575-5687722:-1:exon
so has part: feature:5680368-5680470:-1:exon
so has part: feature:5679319-5679408:-1:exon
so has part: feature:5672017-5672130:-1:exon
so has part: feature:5668835-5668939:-1:exon
so has part: feature:5650706-5650803:-1:exon
so has part: feature:5645297-5645489:-1:exon
so has part: feature:5633639-5633817:-1:exon
so has part: feature:5630847-5630972:-1:exon
so has part: feature:5615269-5615370:-1:exon
so has part: feature:5562714-5563075:-1:exon

position:5689318:-1
position: 5689318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5689091-5689318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5687575-5687722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5680368-5680470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5679319-5679408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5672017-5672130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5668835-5668939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5650706-5650803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5645297-5645489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5633639-5633817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5630847-5630972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5615269-5615370:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5562714-5563075:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 286419
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025477735.3
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5562714..5563075,5599429..5599542,5615269..5615370,5630847..5630972,5633639..5633817,5645297..5645489,5650706..5650803,5668835..5668939,5672017..5672130,5679319..5679408,5680368..5680470,5687575..5687722,5689091..5689318))
location: region:5562714-5689318:-1
so has part: feature:5689091-5689318:-1:exon
so has part: feature:5687575-5687722:-1:exon
so has part: feature:5680368-5680470:-1:exon
so has part: feature:5679319-5679408:-1:exon
so has part: feature:5672017-5672130:-1:exon
so has part: feature:5668835-5668939:-1:exon
so has part: feature:5650706-5650803:-1:exon
so has part: feature:5645297-5645489:-1:exon
so has part: feature:5633639-5633817:-1:exon
so has part: feature:5630847-5630972:-1:exon
so has part: feature:5615269-5615370:-1:exon
so has part: feature:5599429-5599542:-1:exon
so has part: feature:5562714-5563075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5689091-5689318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5687575-5687722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5680368-5680470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5679319-5679408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5672017-5672130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5668835-5668939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5650706-5650803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5645297-5645489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5633639-5633817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5630847-5630972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5615269-5615370:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5599429-5599542:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5562714-5563075:-1:exon