Anastrepha ludens isolate Willacy chromosome Y, idAnaLude1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Anastrepha.
REFSEQ INFORMATION: The reference sequence is identical to\nCM051852.1.\nAssembly name: idAnaLude1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the United States Department of\nAgriculture on 2023/02/06. The original whole-genome shotgun\nproject has the accession JAKYJY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: United States Department of Agriculture\nAssembly Date :: 20-OCT-2021\nAssembly Method :: HiFiASM v. 0.16.1-r375\nAssembly Name :: idAnaLude1.1\nDiploid :: Principal Haplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 44x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_028408465.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/07/2023\n##Genome-Annotation-Data-END##
uncharacterized LOC128870557; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870559; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
uncharacterized LOC128870560; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
uncharacterized LOC128870561; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
uncharacterized LOC128870562; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870563; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870564; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
uncharacterized LOC128870565; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
uncharacterized LOC128870566; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870568; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870554; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870555; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC128870556; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870569; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870547; Derived by automated computational analysis using gene prediction method: Gnomon.
high mobility group protein D-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
uncharacterized LOC128870570; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870551; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870549; Derived by automated computational analysis using gene prediction method: Gnomon.
kelch domain-containing protein 10 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870572; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
uncharacterized LOC128870573; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870575; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870546; Derived by automated computational analysis using gene prediction method: Gnomon.
U2 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00004
Derived by automated computational analysis using gene prediction method: cmsearch.
uncharacterized LOC128870577; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
zinc finger BED domain-containing protein 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger BED domain-containing protein 4-like
uncharacterized LOC128870579; Derived by automated computational analysis using gene prediction method: Gnomon.
putative nuclease HARBI1; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870582; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870583; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870586; Derived by automated computational analysis using gene prediction method: Gnomon.
tigger transposable element-derived protein 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tigger transposable element-derived protein 4-like
uncharacterized LOC128870587; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870553; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870589; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
uncharacterized LOC128870550; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870590; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870591; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870592; Derived by automated computational analysis using gene prediction method: Gnomon.
WW domain-binding protein 11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870594; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870595; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
uncharacterized LOC128870596; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870597; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870543; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870598; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870600; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870602; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870603; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870608; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128870604; Derived by automated computational analysis using gene prediction method: Gnomon.
basic-leucine zipper transcription factor A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
basic-leucine zipper transcription factor A-like
uncharacterized LOC128870607; Derived by automated computational analysis using gene prediction method: Gnomon.