Yarrowia lipolytica mitochondrion, complete genome.
type: Entry
definition: Yarrowia lipolytica mitochondrion, complete genome.
sequence version: NC_002659.1
sequence date: 2023-04-03
sequence: sequence
division: PLN
label: NC_002659.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Yarrowia lipolytica
organism: Yarrowia lipolytica
taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia.
reference: 1
references: 18628906
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence was derived from AJ307410.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 47916
topology: circular
so has quality: SO_0000988
location: 1..47916
location: region:1-47916:1
RO_0002162: 4952

NC_002659
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The complete mitochondrial genome of yarrowia lipolytica
author: Kerscher, S.
author: Durstewitz, G.
author: Casaregola, S.
author: Gaillardin, C.
author: Brandt, U.
journal: Comp. Funct. Genomics
volume: 2
issue: 2
pages: 80-90
year: 2001
pubmed: 18628906

18628906
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (07-APR-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Kerscher, S.J.
journal: Submitted (19-JAN-2001) Institut fuer Biochemie 1, Haus 25B, Universitaetsklinikum Frankfurt, Theodor-Stern-Kai 7, 60590 Frankfurt, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47916:1
position: 47916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-47916:1:source
so part of: sequence
organism: Yarrowia lipolytica
organelle: mitochondrion
mol type: genomic DNA
strain: W29

4952
type: Taxonomy
SIO_000068: taxonomy

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 5..12
location: region:5-12:1
so has part: feature:5-12:1:region

position:5:1
position: 5
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12:1
position: 12
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5-12:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 24..36
location: region:24-36:1
so has part: feature:24-36:1:region

position:24:1
position: 24
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36:1
position: 36
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24-36:1:region

YalifMr30
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMr30
so part of: sequence
location: 72..3042
location: region:72-3042:1
so has part: feature:72-3042:1:exon
subclass of: SO_0000573

1500512
type: Gene
SIO_000068: ncbigene

position:72:1
position: 72
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3042:1
position: 3042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72-3042:1:exon

YalifMr30
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 4952
locus tag: YalifMr30
product: 23S ribosomal RNA
SIO_010081: YalifMr30
subclass of: SO_0000673
so part of: YalifMr30
location: 72..3042
location: region:72-3042:1
so has part: feature:72-3042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72-3042:1:exon

YalifMt32
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt32
so part of: sequence
location: 3063..3133
location: region:3063-3133:1
so has part: feature:3063-3133:1:exon
subclass of: SO_0000663

1500513
type: Gene
SIO_000068: ncbigene

position:3063:1
position: 3063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3133:1
position: 3133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3063-3133:1:exon

YalifMt32
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt32
product: tRNA-Thr
anticodon: (pos:3095..3097,aa:Thr,seq:tgt)
codon recognized: ACA
SIO_010081: YalifMt32
subclass of: SO_0000673
so part of: YalifMt32
location: 3063..3133
location: region:3063-3133:1
so has part: feature:3063-3133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3063-3133:1:exon

YalifMt33
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt33
so part of: sequence
location: 3183..3252
location: region:3183-3252:1
so has part: feature:3183-3252:1:exon
subclass of: SO_0000663

1500504
type: Gene
SIO_000068: ncbigene

position:3183:1
position: 3183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3252:1
position: 3252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3183-3252:1:exon

YalifMt33
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt33
product: tRNA-Glu
anticodon: (pos:3214..3216,aa:Glu,seq:ttc)
codon recognized: GAA
SIO_010081: YalifMt33
subclass of: SO_0000673
so part of: YalifMt33
location: 3183..3252
location: region:3183-3252:1
so has part: feature:3183-3252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3183-3252:1:exon

YalifMt34
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt34
so part of: sequence
location: 3272..3343
location: region:3272-3343:1
so has part: feature:3272-3343:1:exon
subclass of: SO_0000663

1500511
type: Gene
SIO_000068: ncbigene

position:3272:1
position: 3272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3343:1
position: 3343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3272-3343:1:exon

YalifMt34
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt34
product: tRNA-Met
anticodon: (pos:3304..3306,aa:Met,seq:cat)
codon recognized: AUG
SIO_010081: YalifMt34
subclass of: SO_0000673
so part of: YalifMt34
location: 3272..3343
location: region:3272-3343:1
so has part: feature:3272-3343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3272-3343:1:exon

YalifMt35
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt35
so part of: sequence
location: 3374..3445
location: region:3374-3445:1
so has part: feature:3374-3445:1:exon
subclass of: SO_0000663

1500497
type: Gene
SIO_000068: ncbigene

position:3374:1
position: 3374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3445:1
position: 3445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3374-3445:1:exon

YalifMt35
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt35
product: tRNA-Met
anticodon: (pos:3407..3409,aa:Met,seq:cat)
codon recognized: AUG
SIO_010081: YalifMt35
subclass of: SO_0000673
so part of: YalifMt35
location: 3374..3445
location: region:3374-3445:1
so has part: feature:3374-3445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3374-3445:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 3453..3461
location: region:3453-3461:1
so has part: feature:3453-3461:1:region

position:3453:1
position: 3453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3461:1
position: 3461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3453-3461:1:region

YalifMt36
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt36
so part of: sequence
location: 3488..3569
location: region:3488-3569:1
so has part: feature:3488-3569:1:exon
subclass of: SO_0000663

1500496
type: Gene
SIO_000068: ncbigene

position:3488:1
position: 3488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3569:1
position: 3569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3488-3569:1:exon

YalifMt36
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt36
product: tRNA-Leu
anticodon: (pos:3522..3524,aa:Leu,seq:taa)
codon recognized: UUA
SIO_010081: YalifMt36
subclass of: SO_0000673
so part of: YalifMt36
location: 3488..3569
location: region:3488-3569:1
so has part: feature:3488-3569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3488-3569:1:exon

YalifMt37
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt37
so part of: sequence
location: 3599..3679
location: region:3599-3679:1
so has part: feature:3599-3679:1:exon
subclass of: SO_0000663

1500494
type: Gene
SIO_000068: ncbigene

position:3599:1
position: 3599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3679:1
position: 3679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3599-3679:1:exon

YalifMt37
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt37
product: tRNA-Leu
SIO_010081: YalifMt37
subclass of: SO_0000673
so part of: YalifMt37
location: 3599..3679
location: region:3599-3679:1
so has part: feature:3599-3679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3599-3679:1:exon

YalifMt38
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt38
so part of: sequence
location: 3900..3972
location: region:3900-3972:1
so has part: feature:3900-3972:1:exon
subclass of: SO_0000663

1500492
type: Gene
SIO_000068: ncbigene

position:3900:1
position: 3900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3972:1
position: 3972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3900-3972:1:exon

YalifMt38
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt38
product: tRNA-Gln
anticodon: (pos:3933..3935,aa:Gln,seq:ttg)
codon recognized: CAA
SIO_010081: YalifMt38
subclass of: SO_0000673
so part of: YalifMt38
location: 3900..3972
location: region:3900-3972:1
so has part: feature:3900-3972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3900-3972:1:exon

YalifMt39
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt39
so part of: sequence
location: 3991..4061
location: region:3991-4061:1
so has part: feature:3991-4061:1:exon
subclass of: SO_0000663

1500493
type: Gene
SIO_000068: ncbigene

position:3991:1
position: 3991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4061:1
position: 4061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3991-4061:1:exon

YalifMt39
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt39
product: tRNA-Lys
anticodon: (pos:4023..4025,aa:Lys,seq:ttt)
codon recognized: AAA
SIO_010081: YalifMt39
subclass of: SO_0000673
so part of: YalifMt39
location: 3991..4061
location: region:3991-4061:1
so has part: feature:3991-4061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3991-4061:1:exon

YalifMt40
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt40
so part of: sequence
location: 4332..4403
location: region:4332-4403:1
so has part: feature:4332-4403:1:exon
subclass of: SO_0000663

1500519
type: Gene
SIO_000068: ncbigene

position:4332:1
position: 4332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4403:1
position: 4403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4332-4403:1:exon

YalifMt40
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt40
product: tRNA-Ile
anticodon: (pos:4364..4366,aa:Ile,seq:gat)
codon recognized: AUC
SIO_010081: YalifMt40
subclass of: SO_0000673
so part of: YalifMt40
location: 4332..4403
location: region:4332-4403:1
so has part: feature:4332-4403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4332-4403:1:exon

YalifMt41
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt41
so part of: sequence
location: 4409..4495
location: region:4409-4495:1
so has part: feature:4409-4495:1:exon
subclass of: SO_0000663

1500517
type: Gene
SIO_000068: ncbigene

position:4409:1
position: 4409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4495:1
position: 4495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4409-4495:1:exon

YalifMt41
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt41
product: tRNA-Ser
anticodon: (pos:4443..4445,aa:Ser,seq:tga)
codon recognized: UCA
SIO_010081: YalifMt41
subclass of: SO_0000673
so part of: YalifMt41
location: 4409..4495
location: region:4409-4495:1
so has part: feature:4409-4495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4409-4495:1:exon

YalifMt42
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt42
so part of: sequence
location: 4594..4665
location: region:4594-4665:1
so has part: feature:4594-4665:1:exon
subclass of: SO_0000663

1500515
type: Gene
SIO_000068: ncbigene

position:4594:1
position: 4594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4665:1
position: 4665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4594-4665:1:exon

YalifMt42
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt42
product: tRNA-Ala
anticodon: (pos:4627..4629,aa:Ala,seq:tgc)
codon recognized: GCA
SIO_010081: YalifMt42
subclass of: SO_0000673
so part of: YalifMt42
location: 4594..4665
location: region:4594-4665:1
so has part: feature:4594-4665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4594-4665:1:exon

YalifMt43
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt43
so part of: sequence
location: 4674..4746
location: region:4674-4746:1
so has part: feature:4674-4746:1:exon
subclass of: SO_0000663

1500516
type: Gene
SIO_000068: ncbigene

position:4674:1
position: 4674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4746:1
position: 4746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4674-4746:1:exon

YalifMt43
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt43
product: tRNA-Phe
anticodon: (pos:4708..4710,aa:Phe,seq:gaa)
codon recognized: UUC
SIO_010081: YalifMt43
subclass of: SO_0000673
so part of: YalifMt43
location: 4674..4746
location: region:4674-4746:1
so has part: feature:4674-4746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4674-4746:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4952
note: GC rich cluster
rpt type: inverted
so part of: sequence
location: 4858..4893
location: region:4858-4893:1
so has part: feature:4858-4893:1:region

position:4858:1
position: 4858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4893:1
position: 4893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4858-4893:1:region

YalifMt44
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt44
so part of: sequence
location: 4983..5067
location: region:4983-5067:1
so has part: feature:4983-5067:1:exon
subclass of: SO_0000663

1500518
type: Gene
SIO_000068: ncbigene

position:4983:1
position: 4983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5067:1
position: 5067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4983-5067:1:exon

YalifMt44
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt44
product: tRNA-Tyr
anticodon: (pos:5019..5021,aa:Tyr,seq:gta)
codon recognized: UAC
SIO_010081: YalifMt44
subclass of: SO_0000673
so part of: YalifMt44
location: 4983..5067
location: region:4983-5067:1
so has part: feature:4983-5067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4983-5067:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4952
rpt type: tandem
so part of: sequence
location: 5045..5129
location: region:5045-5129:1
so has part: feature:5045-5129:1:region

position:5045:1
position: 5045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5129:1
position: 5129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5045-5129:1:region

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4952
rpt type: tandem
so part of: sequence
location: 5317..5401
location: region:5317-5401:1
so has part: feature:5317-5401:1:region

position:5317:1
position: 5317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5401:1
position: 5401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5317-5401:1:region

YalifMt45
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt45
so part of: sequence
location: 5460..5530
location: region:5460-5530:1
so has part: feature:5460-5530:1:exon
subclass of: SO_0000663

1500514
type: Gene
SIO_000068: ncbigene

position:5460:1
position: 5460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5530:1
position: 5530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5460-5530:1:exon

YalifMt45
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt45
product: tRNA-Asn
anticodon: (pos:5492..5494,aa:Asn,seq:gtt)
codon recognized: AAC
SIO_010081: YalifMt45
subclass of: SO_0000673
so part of: YalifMt45
location: 5460..5530
location: region:5460-5530:1
so has part: feature:5460-5530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5460-5530:1:exon

YalifMp01
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: nd6
locus tag: YalifMp01
so part of: sequence
location: 5596..6153
location: region:5596-6153:1
so has part: feature:5596-6153:1:exon
subclass of: SO_0000010

802611
type: Gene
SIO_000068: ncbigene

position:5596:1
position: 5596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6153:1
position: 6153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5596-6153:1:exon

YalifMp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: nd6
locus tag: YalifMp01
note: subunit ND6 of proton translocating NADH:ubiquinone oxidoreductase
codon start: 1
transl table: 4
product: ND6 protein
translation: MMYLTYYFIEITIFLAILCTIFIISAKNPMVSILYMIALFVIAAMYLYLIGLGIFSLLYIMIYIGAIAVLFLFIITLLDINSTELSVKSNIRDLPLVLISLIVLTISGLMIYSNDSILINKLLEAFGNDYNTIITQDWFNIENTTLLTTIGNVLLTNNAFILLVLAIVLLLGIIGPISITMKHKE
SIO_010081: YalifMp01
subclass of: SO_0000673
so part of: YalifMp01
location: 5596..6153
location: region:5596-6153:1
so has part: feature:5596-6153:1:exon

NP_075423.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5596-6153:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4952
note: GC rich cluster
rpt type: inverted
so part of: sequence
location: 6191..6229
location: region:6191-6229:1
so has part: feature:6191-6229:1:region

position:6191:1
position: 6191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6229:1
position: 6229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6191-6229:1:region

YalifMp02
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: nd1
locus tag: YalifMp02
so part of: sequence
location: 6408..8465
location: region:6408-8465:1
so has part: feature:6408-8465:1:exon
subclass of: SO_0000010

802607
type: Gene
SIO_000068: ncbigene

position:6408:1
position: 6408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8465:1
position: 8465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6408-8465:1:exon

YalifMp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: nd1
locus tag: YalifMp02
note: subunit ND1 of proton translocating NADH:ubiquinone oxidoreductase
codon start: 1
transl table: 4
product: ND1 protein
translation: MIINIVEILIFLVCVLFSVAYLTVAERKTLAYMQRRLGPNFVGYYGLLQAFADAVKLLLKEIVLPKESNYIILVISPLITLITALIGWVVIPLGPGITLGELNLGILFSLAIGSLGVFGSLLSGWSSNSKYSLLGSIRSTAQLISYELILTSIFIIIIMFVSSLNITTIIETQRVVWYCIPLLPLLLIFFIASVAETARPPFDLTESESELVAGYFTEYSGSPFVFFFLAEYSNIILISAFNGYLLLGGYLSFNYSYLFNILFNDYSYVSFLFEGLINSSAYAIKLVFLMFSFIWVRAAFPRFTYDNLINFCWIILLPLLFGIFLIIPSTLYIFDSFPTLI
SIO_010081: YalifMp02
subclass of: SO_0000673
so part of: YalifMp02
location: join(6408..6536,7569..8465)
location: region:6408-8465:1
so has part: feature:6408-6536:1:exon
so has part: feature:7569-8465:1:exon

NP_075424.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6408-6536:1:exon

position:6536:1
position: 6536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7569-8465:1:exon

position:7569:1
position: 7569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YalifMp02
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: nd1
locus tag: YalifMp02
number: 1
SIO_010081: YalifMp02
subclass of: SO_0000673
so part of: YalifMp02
location: 6408..6536
location: region:6408-6536:1
so has part: feature:6408-6536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6408-6536:1:exon

YalifMp02
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
gene: nd1
locus tag: YalifMp02
number: 1
SIO_010081: YalifMp02
subclass of: SO_0000673
so part of: YalifMp02
location: 6537..7568
location: region:6537-7568:1
so has part: feature:6537-7568:1:exon

position:6537:1
position: 6537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7568:1
position: 7568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6537-7568:1:exon

YalifMp02
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4952
gene: nd1
locus tag: YalifMp02
note: six direct repeats
rpt type: direct
rpt unit range: 7064..7067
SIO_010081: YalifMp02
subclass of: SO_0000673
so part of: YalifMp02
location: 7064..7087
location: region:7064-7087:1
so has part: feature:7064-7087:1:exon

position:7064:1
position: 7064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7087:1
position: 7087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7064-7087:1:exon

YalifMp02
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4952
gene: nd1
locus tag: YalifMp02
note: ten direct repeats
rpt type: direct
rpt unit range: 7088..7092
SIO_010081: YalifMp02
subclass of: SO_0000673
so part of: YalifMp02
location: 7088..7137
location: region:7088-7137:1
so has part: feature:7088-7137:1:exon

position:7088:1
position: 7088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7137:1
position: 7137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7088-7137:1:exon

YalifMp02
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: nd1
locus tag: YalifMp02
number: 2
SIO_010081: YalifMp02
subclass of: SO_0000673
so part of: YalifMp02
location: 7569..8465
location: region:7569-8465:1
so has part: feature:7569-8465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7569-8465:1:exon

YalifMt46
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt46
so part of: sequence
location: 8558..8626
location: region:8558-8626:1
so has part: feature:8558-8626:1:exon
subclass of: SO_0000663

1500501
type: Gene
SIO_000068: ncbigene

position:8558:1
position: 8558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8626:1
position: 8626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8558-8626:1:exon

YalifMt46
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt46
product: tRNA-Cys
anticodon: (pos:8588..8590,aa:Cys,seq:gca)
codon recognized: UGC
SIO_010081: YalifMt46
subclass of: SO_0000673
so part of: YalifMt46
location: 8558..8626
location: region:8558-8626:1
so has part: feature:8558-8626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8558-8626:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 8791..8799
location: region:8791-8799:1
so has part: feature:8791-8799:1:region

position:8791:1
position: 8791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8799:1
position: 8799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8791-8799:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 8869..8877
location: region:8869-8877:1
so has part: feature:8869-8877:1:region

position:8869:1
position: 8869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8877:1
position: 8877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8869-8877:1:region

YalifMt47
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt47
so part of: sequence
location: 8985..9055
location: region:8985-9055:1
so has part: feature:8985-9055:1:exon
subclass of: SO_0000663

1500495
type: Gene
SIO_000068: ncbigene

position:8985:1
position: 8985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9055:1
position: 9055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8985-9055:1:exon

YalifMt47
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt47
product: tRNA-Gly
anticodon: (pos:9017..9019,aa:Gly,seq:tcc)
codon recognized: GGA
SIO_010081: YalifMt47
subclass of: SO_0000673
so part of: YalifMt47
location: 8985..9055
location: region:8985-9055:1
so has part: feature:8985-9055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8985-9055:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 9294..9302
location: region:9294-9302:1
so has part: feature:9294-9302:1:region

position:9294:1
position: 9294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9302:1
position: 9302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9294-9302:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 9329..9337
location: region:9329-9337:1
so has part: feature:9329-9337:1:region

position:9329:1
position: 9329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9337:1
position: 9337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9329-9337:1:region

YalifMr31
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMr31
so part of: sequence
location: 9333..10923
location: region:9333-10923:1
so has part: feature:9333-10923:1:exon
subclass of: SO_0000573

1500510
type: Gene
SIO_000068: ncbigene

position:9333:1
position: 9333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10923:1
position: 10923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9333-10923:1:exon

YalifMr31
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 4952
locus tag: YalifMr31
product: 16S ribosomal RNA
SIO_010081: YalifMr31
subclass of: SO_0000673
so part of: YalifMr31
location: 9333..10923
location: region:9333-10923:1
so has part: feature:9333-10923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9333-10923:1:exon

YalifMt48
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt48
so part of: sequence
location: 10937..11007
location: region:10937-11007:1
so has part: feature:10937-11007:1:exon
subclass of: SO_0000663

1500505
type: Gene
SIO_000068: ncbigene

position:10937:1
position: 10937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11007:1
position: 11007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10937-11007:1:exon

YalifMt48
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt48
product: tRNA-His
anticodon: (pos:10969..10971,aa:His,seq:gtg)
codon recognized: CAC
SIO_010081: YalifMt48
subclass of: SO_0000673
so part of: YalifMt48
location: 10937..11007
location: region:10937-11007:1
so has part: feature:10937-11007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10937-11007:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 11033..11041
location: region:11033-11041:1
so has part: feature:11033-11041:1:region

position:11033:1
position: 11033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11041:1
position: 11041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11033-11041:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 11082..11090
location: region:11082-11090:1
so has part: feature:11082-11090:1:region

position:11082:1
position: 11082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11090:1
position: 11090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11082-11090:1:region

YalifMt49
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt49
so part of: sequence
location: 12158..12229
location: region:12158-12229:1
so has part: feature:12158-12229:1:exon
subclass of: SO_0000663

1500500
type: Gene
SIO_000068: ncbigene

position:12158:1
position: 12158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12229:1
position: 12229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12158-12229:1:exon

YalifMt49
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt49
product: tRNA-Asp
anticodon: (pos:12190..12192,aa:Asp,seq:gtc)
codon recognized: GAC
SIO_010081: YalifMt49
subclass of: SO_0000673
so part of: YalifMt49
location: 12158..12229
location: region:12158-12229:1
so has part: feature:12158-12229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12158-12229:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 12263..12272
location: region:12263-12272:1
so has part: feature:12263-12272:1:region

position:12263:1
position: 12263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12272:1
position: 12272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12263-12272:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 12300..12307
location: region:12300-12307:1
so has part: feature:12300-12307:1:region

position:12300:1
position: 12300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12307:1
position: 12307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12300-12307:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 12355..12362
location: region:12355-12362:1
so has part: feature:12355-12362:1:region

position:12355:1
position: 12355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12362:1
position: 12362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12355-12362:1:region

YalifMt50
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt50
so part of: sequence
location: 12414..12484
location: region:12414-12484:1
so has part: feature:12414-12484:1:exon
subclass of: SO_0000663

1500498
type: Gene
SIO_000068: ncbigene

position:12414:1
position: 12414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12484:1
position: 12484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12414-12484:1:exon

YalifMt50
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt50
product: tRNA-Lys
anticodon: (pos:12446..12448,aa:Lys,seq:ctt)
codon recognized: AAG
SIO_010081: YalifMt50
subclass of: SO_0000673
so part of: YalifMt50
location: 12414..12484
location: region:12414-12484:1
so has part: feature:12414-12484:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12414-12484:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 12771..12779
location: region:12771-12779:1
so has part: feature:12771-12779:1:region

position:12771:1
position: 12771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12779:1
position: 12779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12771-12779:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 12963..12974
location: region:12963-12974:1
so has part: feature:12963-12974:1:region

position:12963:1
position: 12963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12974:1
position: 12974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12963-12974:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 12992..13000
location: region:12992-13000:1
so has part: feature:12992-13000:1:region

position:12992:1
position: 12992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13000:1
position: 13000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12992-13000:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 13074..13082
location: region:13074-13082:1
so has part: feature:13074-13082:1:region

position:13074:1
position: 13074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13082:1
position: 13082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13074-13082:1:region

YalifMp03
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1
locus tag: YalifMp03
gene synonym: cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
so part of: sequence
location: 13151..25609
location: region:13151-25609:1
so has part: feature:13151-25609:1:exon
subclass of: SO_0000010

802596
type: Gene
SIO_000068: ncbigene

position:13151:1
position: 13151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25609:1
position: 25609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13151-25609:1:exon

YalifMp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1
locus tag: YalifMp03
gene synonym: cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
codon start: 1
transl table: 4
product: cytochrome c oxidase subunit 1
translation: MSLKLNIQRWLFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVYILIIPGFGIISHAVSAIASKPVFGVQGMIYAMWSIGLLGFCVWSHHMFAVGLDSDTRAYFTSATMVIAVPTSIKIFSWLATLYGGTIRLNVTALFALGFIFLFTIGGLTGVVLANSALDIPFHDSYYVVAHFHYVLSMGAVFSIFCGWYLWSPKILGLHYNERLSHIHFWLMFIGVNVTFFPMHFLGLQGMPRRINDYPDAFIGWNQVASLGSIISIVASIVFIYVVYDQLTNGLHQGNKALDSQFKPSFMGTNLNVEGYTGPTLEWTVSTPPSLHAFNTPAVLY
SIO_010081: YalifMp03
subclass of: SO_0000673
so part of: YalifMp03
location: join(13151..13377,14680..14707,16071..16216,17468..17801,19485..19495,20666..20801,22100..22339,23567..23584,23833..24003,25313..25609)
location: region:13151-25609:1
so has part: feature:13151-13377:1:exon
so has part: feature:14680-14707:1:exon
so has part: feature:16071-16216:1:exon
so has part: feature:17468-17801:1:exon
so has part: feature:19485-19495:1:exon
so has part: feature:20666-20801:1:exon
so has part: feature:22100-22339:1:exon
so has part: feature:23567-23584:1:exon
so has part: feature:23833-24003:1:exon
so has part: feature:25313-25609:1:exon

NP_075425.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13151-13377:1:exon

position:13377:1
position: 13377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14680-14707:1:exon

position:14680:1
position: 14680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14707:1
position: 14707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16071-16216:1:exon

position:16071:1
position: 16071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16216:1
position: 16216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17468-17801:1:exon

position:17468:1
position: 17468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17801:1
position: 17801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:19485-19495:1:exon

position:19485:1
position: 19485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19495:1
position: 19495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20666-20801:1:exon

position:20666:1
position: 20666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20801:1
position: 20801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22100-22339:1:exon

position:22100:1
position: 22100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22339:1
position: 22339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:23567-23584:1:exon

position:23567:1
position: 23567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23584:1
position: 23584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:23833-24003:1:exon

position:23833:1
position: 23833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24003:1
position: 24003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:25313-25609:1:exon

position:25313:1
position: 25313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YalifMp04
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
gene: cox1-i9
locus tag: YalifMp04
gene synonym: cox1; cox1-i5; cox1-i7
pseudo: true
so part of: sequence
location: 13151..25182
location: region:13151-25182:1
so has part: feature:13151-25182:1:exon

1498570
type: Gene
SIO_000068: ncbigene

position:25182:1
position: 25182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13151-25182:1:exon

YalifMp04
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
gene: cox1-i9
locus tag: YalifMp04
gene synonym: cox1; cox1-i5; cox1-i7
note: COX1-i9 protein
pseudo: true
SIO_010081: YalifMp04
subclass of: SO_0000673
so part of: YalifMp04
location: 13151..25182
location: region:13151-25182:1
so has part: feature:13151-25182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13151-25182:1:exon

YalifMp05
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i9
gene: cox1-i7
locus tag: YalifMp05
gene synonym: cox1; cox1-i5; cox1-i9
so part of: sequence
location: 13151..23209
location: region:13151-23209:1
so has part: feature:13151-23209:1:exon
subclass of: SO_0000010

802606
type: Gene
SIO_000068: ncbigene

position:23209:1
position: 23209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13151-23209:1:exon

YalifMp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i9
gene: cox1-i7
locus tag: YalifMp05
gene synonym: cox1; cox1-i5; cox1-i9
note: LAGLIDADG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: COX1-i7 protein
translation: MSLKLNIQRWLFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVYILIIPGFGIISHAVSAIASKPVFGVQGMIYAMWSIGLLGFCVWSHHMFAVGLDSDTRAYFTSATMVIAVPTSIKIFSWLATLYGGTIRLNVTALFALGFIFLFTIGGLTGVVLANSALDIPFHDRKLNKRFSSQKTPLKDPSLLNIKNDLERGANNILPFFVGLFDGDGNIQVNHWRKKNLQFRLVIELLNNIGNVRMLNLITKELGGKIIFSGIKVKWTMNDAQEIIKLCNIFKEYPLLTKKKRYQLAFLQTFYSIYKNIDKELAMKLYFELRNNKYDSNTYKYLNNKTGCNNNYIPINYNKIDQVYFCNWFAGFIESEGSFSLRVSNNHSFSFSQKDYELMLYCKTFFNIPNKIRDIGNNSYLLECYKKELLDKFTIFFNKYPLYGNKLDQFIEFKNARDKTNFCPPSEDK
SIO_010081: YalifMp05
subclass of: SO_0000673
so part of: YalifMp05
location: join(13151..13377,14680..14707,16071..16216,17468..17801,19485..19495,20666..20801,22100..23209)
location: region:13151-23209:1
so has part: feature:13151-13377:1:exon
so has part: feature:14680-14707:1:exon
so has part: feature:16071-16216:1:exon
so has part: feature:17468-17801:1:exon
so has part: feature:19485-19495:1:exon
so has part: feature:20666-20801:1:exon
so has part: feature:22100-23209:1:exon

NP_075426.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13151-13377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14680-14707:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16071-16216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17468-17801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19485-19495:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20666-20801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22100-23209:1:exon

YalifMp06
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i2
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i5
locus tag: YalifMp06
gene synonym: cox1; cox1-i2; cox1-i3; cox1-i4; cox1-i7; cox1-i9
so part of: sequence
location: 13151..20576
location: region:13151-20576:1
so has part: feature:13151-20576:1:exon
subclass of: SO_0000010

802613
type: Gene
SIO_000068: ncbigene

position:20576:1
position: 20576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13151-20576:1:exon

YalifMp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i2
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i5
locus tag: YalifMp06
gene synonym: cox1; cox1-i2; cox1-i3; cox1-i4; cox1-i7; cox1-i9
note: LAGLIDADG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: COX1-i5 protein
translation: MSLKLNIQRWLFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICLIILLYAGKSFISKIYNIKGSINHIYINNVIVLILSKLNYCINNNIIIYRKGLSAGNFINKGTSETIRNNIDLIIEILLYNKVVKTIKDISVHIPKHNRINNDNDLGYYLAGLMDSNSEIINNNMIIHFNNDDYSYMYLIKKQIGYGSIIKGNNCKLIIKSNGIPKVLNLINNKINNKILFTQIINYIKLNNLNIDFILNNNLNILNNYWLSGYLDVNSKFDINLNLINNNLYNIDFNLYIKAPLNDKNNIDNNILNLINSNLKGYIYKDENNNAIYNINSLNIVYKYIMYLRSYHLMSNKYLTYIYWRKTYIRVQNIIWYVTNGIPKIDYYNHETEISKIENNAIKLNKLNNKT
SIO_010081: YalifMp06
subclass of: SO_0000673
so part of: YalifMp06
location: join(13151..13377,14680..14707,16071..16216,17468..17801,19485..20576)
location: region:13151-20576:1
so has part: feature:13151-13377:1:exon
so has part: feature:14680-14707:1:exon
so has part: feature:16071-16216:1:exon
so has part: feature:17468-17801:1:exon
so has part: feature:19485-20576:1:exon

NP_075427.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13151-13377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14680-14707:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16071-16216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17468-17801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19485-20576:1:exon

YalifMp07
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i4
locus tag: YalifMp07
gene synonym: cox1; cox1-i5; cox1-i7; cox1-i9
pseudo: true
so part of: sequence
location: 13151..18790
location: region:13151-18790:1
so has part: feature:13151-18790:1:exon

1498569
type: Gene
SIO_000068: ncbigene

position:18790:1
position: 18790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13151-18790:1:exon

YalifMp07
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i4
locus tag: YalifMp07
gene synonym: cox1; cox1-i5; cox1-i7; cox1-i9
note: COX1-i4 protein
pseudo: true
SIO_010081: YalifMp07
subclass of: SO_0000673
so part of: YalifMp07
location: 13151..18790
location: region:13151-18790:1
so has part: feature:13151-18790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13151-18790:1:exon

YalifMp08
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i3
locus tag: YalifMp08
gene synonym: cox1; cox1-i4; cox1-i5; cox1-i7; cox1-i9
so part of: sequence
location: 13151..17189
location: region:13151-17189:1
so has part: feature:13151-17189:1:exon
subclass of: SO_0000010

802614
type: Gene
SIO_000068: ncbigene

position:17189:1
position: 17189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13151-17189:1:exon

YalifMp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i3
locus tag: YalifMp08
gene synonym: cox1; cox1-i4; cox1-i5; cox1-i7; cox1-i9
note: LAGLIDADG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: COX1-i3 protein
translation: MSLKLNIQRWLFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKMPFDAWNTFIIIIIKCLNYSIVLLICYTIYGYNYISYIGIKWYKSFMSQLVKIFKHIGQYACILTNIHQRLHMAKQYSNMSNSNNNPKDPFNFEEWLVGLVDGDGTFNVYVYPDKNKGTFTFKISLSKYNAQMLYYIKTKLGVGSVTITSNNSLDKNMITFRIRNTKHLKDIIFPIFDKYPLLTIKRYKYLIFKECVLLSLNSTLTQEEKYRQIRQIYKNKQSEDYISDAWKGLTIEDLNKDKTLVKNIMSKAWLAGFIDAEGCFTYVKKDSTRNYTLFCYYSKIWSNSIIWYKIFIKNKCKCNMKQKRFLFIKYN
SIO_010081: YalifMp08
subclass of: SO_0000673
so part of: YalifMp08
location: join(13151..13377,14680..14707,16071..17189)
location: region:13151-17189:1
so has part: feature:13151-13377:1:exon
so has part: feature:14680-14707:1:exon
so has part: feature:16071-17189:1:exon

NP_075428.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13151-13377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14680-14707:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16071-17189:1:exon

YalifMp09
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i2
locus tag: YalifMp09
gene synonym: cox1; cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
so part of: sequence
location: 13151..15715
location: region:13151-15715:1
so has part: feature:13151-15715:1:exon
subclass of: SO_0000010

802605
type: Gene
SIO_000068: ncbigene

position:15715:1
position: 15715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13151-15715:1:exon

YalifMp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i2
locus tag: YalifMp09
gene synonym: cox1; cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
note: LAGLIDADG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: COX1-i2 protein
translation: MSLKLNIQRWLFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGKIRFKSVINLTEKNTIDSELNNKLNENQINYNNLGPYLTGLIEGNGTISVSKKELGKYKYKPSISIVFNKKDKPLCKYLINLTKCGIINKEKGNYFIWQINKLSEFYIILSLTNGYYRTPKYEGYLRAIEFNNDYINKNINHTHPNTINIINNIKIIKALPLDSSNIESNSWLAGFTDADGNFSLAIDSGRLRINPAYRLEIRQNYNNYVDTQNKGLYPRDYFEIMSKIGAYLEVNLYTRSRNMNIDKEIKTYHSYIIMTNSIIKNTNVIKYFDKFPLLSSKFLDYSNWKYMDQYIKINGQCKNTWDLGLKLKKDYNSTRTTFTWKHLVNSYLEH
SIO_010081: YalifMp09
subclass of: SO_0000673
so part of: YalifMp09
location: join(13151..13377,14680..15715)
location: region:13151-15715:1
so has part: feature:13151-13377:1:exon
so has part: feature:14680-15715:1:exon

NP_075429.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13151-13377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14680-15715:1:exon

YalifMp10
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: cox1-i1
locus tag: YalifMp10
so part of: sequence
location: 13151..14350
location: region:13151-14350:1
so has part: feature:13151-14350:1:exon
subclass of: SO_0000010

802602
type: Gene
SIO_000068: ncbigene

position:14350:1
position: 14350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13151-14350:1:exon

YalifMp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: cox1-i1
locus tag: YalifMp10
note: GIY-YIG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: COX1-i1 protein
translation: MSLKLNIQRWLFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVNNRILFKSHTPNNNIIINPDSVIISDNNNNNNNNNNNNHFKYTKVIIEDPLNNRDILLRVAKGQKGIYIWESIDGKNKYVGHSINLYNRISSYYMPSILKTKARKVLSYLNENGFKDIKLTIYILNSEILIDDLVKLEQHFFDTLKPNLNMTLIASATYNNGTMSENAKSKLRTERGIPIFIYDVNTLNLLYIFESKQDMYNKLHIHHITLNKCLDLSEFYLDNFLLSLDYIEEFINEDILSLDEIINLITKSREIYKITRQPKSKKILAEFKGNPDNNKVFTSLNELAKYLKGDRATIRKYLKGEGYYRGVWRFKYWQGEIK
SIO_010081: YalifMp10
subclass of: SO_0000673
so part of: YalifMp10
location: 13151..14350
location: region:13151-14350:1
so has part: feature:13151-14350:1:exon

NP_075430.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13151-14350:1:exon

YalifMp05
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i9
gene: cox1-i7
locus tag: YalifMp05
gene synonym: cox1; cox1-i5; cox1-i9
number: 1
SIO_010081: YalifMp05
subclass of: SO_0000673
so part of: YalifMp05
location: 13151..13377
location: region:13151-13377:1
so has part: feature:13151-13377:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13151-13377:1:exon

YalifMp09
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i2
locus tag: YalifMp09
gene synonym: cox1; cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
number: 1
SIO_010081: YalifMp09
subclass of: SO_0000673
so part of: YalifMp09
location: 13378..14679
location: region:13378-14679:1
so has part: feature:13378-14679:1:exon

position:13378:1
position: 13378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14679:1
position: 14679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13378-14679:1:exon

YalifMp09
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i2
locus tag: YalifMp09
gene synonym: cox1; cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
note: six direct repeats
rpt type: direct
rpt unit range: 14508..14513
SIO_010081: YalifMp09
subclass of: SO_0000673
so part of: YalifMp09
location: 14508..14549
location: region:14508-14549:1
so has part: feature:14508-14549:1:exon

position:14508:1
position: 14508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14549:1
position: 14549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14508-14549:1:exon

YalifMp09
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i2
locus tag: YalifMp09
gene synonym: cox1; cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
number: 2
SIO_010081: YalifMp09
subclass of: SO_0000673
so part of: YalifMp09
location: 14680..15715
location: region:14680-15715:1
so has part: feature:14680-15715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14680-15715:1:exon

YalifMp09
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i2
locus tag: YalifMp09
gene synonym: cox1; cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
number: 2
SIO_010081: YalifMp09
subclass of: SO_0000673
so part of: YalifMp09
location: 14680..14707
location: region:14680-14707:1
so has part: feature:14680-14707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14680-14707:1:exon

YalifMp08
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i3
locus tag: YalifMp08
gene synonym: cox1; cox1-i4; cox1-i5; cox1-i7; cox1-i9
number: 2
SIO_010081: YalifMp08
subclass of: SO_0000673
so part of: YalifMp08
location: 14708..16070
location: region:14708-16070:1
so has part: feature:14708-16070:1:exon

position:14708:1
position: 14708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16070:1
position: 16070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14708-16070:1:exon

YalifMp08
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i3
locus tag: YalifMp08
gene synonym: cox1; cox1-i4; cox1-i5; cox1-i7; cox1-i9
number: 3
SIO_010081: YalifMp08
subclass of: SO_0000673
so part of: YalifMp08
location: 16071..17189
location: region:16071-17189:1
so has part: feature:16071-17189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16071-17189:1:exon

YalifMp08
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i3
locus tag: YalifMp08
gene synonym: cox1; cox1-i4; cox1-i5; cox1-i7; cox1-i9
number: 3
SIO_010081: YalifMp08
subclass of: SO_0000673
so part of: YalifMp08
location: 16071..16216
location: region:16071-16216:1
so has part: feature:16071-16216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16071-16216:1:exon

YalifMp07
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i4
locus tag: YalifMp07
gene synonym: cox1; cox1-i5; cox1-i7; cox1-i9
number: 3
pseudo: true
SIO_010081: YalifMp07
subclass of: SO_0000673
so part of: YalifMp07
location: 16217..17467
location: region:16217-17467:1
so has part: feature:16217-17467:1:exon

position:16217:1
position: 16217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17467:1
position: 17467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16217-17467:1:exon

YalifMp07
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i4
locus tag: YalifMp07
gene synonym: cox1; cox1-i5; cox1-i7; cox1-i9
number: 4
pseudo: true
SIO_010081: YalifMp07
subclass of: SO_0000673
so part of: YalifMp07
location: 17468..18790
location: region:17468-18790:1
so has part: feature:17468-18790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17468-18790:1:exon

YalifMp07
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i4
locus tag: YalifMp07
gene synonym: cox1; cox1-i5; cox1-i7; cox1-i9
number: 4
pseudo: true
SIO_010081: YalifMp07
subclass of: SO_0000673
so part of: YalifMp07
location: 17468..17801
location: region:17468-17801:1
so has part: feature:17468-17801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17468-17801:1:exon

YalifMp06
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i2
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i5
locus tag: YalifMp06
gene synonym: cox1; cox1-i2; cox1-i3; cox1-i4; cox1-i7; cox1-i9
number: 4
SIO_010081: YalifMp06
subclass of: SO_0000673
so part of: YalifMp06
location: 17802..19484
location: region:17802-19484:1
so has part: feature:17802-19484:1:exon

position:17802:1
position: 17802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19484:1
position: 19484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17802-19484:1:exon

YalifMp05
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i9
gene: cox1-i7
locus tag: YalifMp05
gene synonym: cox1; cox1-i5; cox1-i9
number: 5
SIO_010081: YalifMp05
subclass of: SO_0000673
so part of: YalifMp05
location: 19485..20756
location: region:19485-20756:1
so has part: feature:19485-20756:1:exon

position:20756:1
position: 20756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19485-20756:1:exon

YalifMp06
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i2
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1-i5
locus tag: YalifMp06
gene synonym: cox1; cox1-i2; cox1-i3; cox1-i4; cox1-i7; cox1-i9
number: 5
SIO_010081: YalifMp06
subclass of: SO_0000673
so part of: YalifMp06
location: 19485..19495
location: region:19485-19495:1
so has part: feature:19485-19495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19485-19495:1:exon

YalifMp05
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i9
gene: cox1-i7
locus tag: YalifMp05
gene synonym: cox1; cox1-i5; cox1-i9
number: 5
SIO_010081: YalifMp05
subclass of: SO_0000673
so part of: YalifMp05
location: 19496..20665
location: region:19496-20665:1
so has part: feature:19496-20665:1:exon

position:19496:1
position: 19496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20665:1
position: 20665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19496-20665:1:exon

YalifMp05
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i9
gene: cox1-i7
locus tag: YalifMp05
gene synonym: cox1; cox1-i5; cox1-i9
number: 6
SIO_010081: YalifMp05
subclass of: SO_0000673
so part of: YalifMp05
location: 20666..20801
location: region:20666-20801:1
so has part: feature:20666-20801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20666-20801:1:exon

YalifMp05
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i9
gene: cox1-i7
locus tag: YalifMp05
gene synonym: cox1; cox1-i5; cox1-i9
number: 6
SIO_010081: YalifMp05
subclass of: SO_0000673
so part of: YalifMp05
location: 20802..22099
location: region:20802-22099:1
so has part: feature:20802-22099:1:exon

position:20802:1
position: 20802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22099:1
position: 22099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20802-22099:1:exon

YalifMp11
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: cox1-i6
locus tag: YalifMp11
so part of: sequence
location: 21062..21808
location: region:21062-21808:1
so has part: feature:21062-21808:1:exon
subclass of: SO_0000010

802620
type: Gene
SIO_000068: ncbigene

position:21062:1
position: 21062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21808:1
position: 21808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21062-21808:1:exon

YalifMp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: cox1-i6
locus tag: YalifMp11
note: LAGLIDADG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: COX1-i6 protein
translation: MHLCQQIININDNNSKLKIMPLDKGKYGLFRKHYKILLKKDFIESDQWLDWFVGFSEGDDCLFTSVKNNRCYFILTQKEISILNHIKDVFDFGNVKLFNYNNKSVKTKTDIIDFGRWTCYDKKLIVLLYLIFNGNLYLKSKNTDLNNWYNILMNSPLSRLKAVGITSLNLIPIFNPKLNKPKLYNSLLSGFIDAEGCFTISFYTSEKVAVRFILDQAEEEILLNNIGILFSNKPSVYLRKTKGKDIYR
SIO_010081: YalifMp11
subclass of: SO_0000673
so part of: YalifMp11
location: 21062..21808
location: region:21062-21808:1
so has part: feature:21062-21808:1:exon

NP_075431.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21062-21808:1:exon

YalifMp05
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i9
gene: cox1-i7
locus tag: YalifMp05
gene synonym: cox1; cox1-i5; cox1-i9
number: 7
SIO_010081: YalifMp05
subclass of: SO_0000673
so part of: YalifMp05
location: 22100..23209
location: region:22100-23209:1
so has part: feature:22100-23209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22100-23209:1:exon

YalifMp05
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i9
gene: cox1-i7
locus tag: YalifMp05
gene synonym: cox1; cox1-i5; cox1-i9
number: 7
SIO_010081: YalifMp05
subclass of: SO_0000673
so part of: YalifMp05
location: 22100..22339
location: region:22100-22339:1
so has part: feature:22100-22339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22100-22339:1:exon

YalifMp04
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
gene: cox1-i9
locus tag: YalifMp04
gene synonym: cox1; cox1-i5; cox1-i7
number: 7
pseudo: true
SIO_010081: YalifMp04
subclass of: SO_0000673
so part of: YalifMp04
location: 22340..23566
location: region:22340-23566:1
so has part: feature:22340-23566:1:exon

position:22340:1
position: 22340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23566:1
position: 23566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22340-23566:1:exon

YalifMp04
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
gene: cox1-i9
locus tag: YalifMp04
gene synonym: cox1; cox1-i5; cox1-i7
number: 8
pseudo: true
SIO_010081: YalifMp04
subclass of: SO_0000673
so part of: YalifMp04
location: 23567..23584
location: region:23567-23584:1
so has part: feature:23567-23584:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23567-23584:1:exon

YalifMp04
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
gene: cox1-i9
locus tag: YalifMp04
gene synonym: cox1; cox1-i5; cox1-i7
number: 8
pseudo: true
SIO_010081: YalifMp04
subclass of: SO_0000673
so part of: YalifMp04
location: 23585..23832
location: region:23585-23832:1
so has part: feature:23585-23832:1:exon

position:23585:1
position: 23585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23832:1
position: 23832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23585-23832:1:exon

YalifMp04
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
gene: cox1-i9
locus tag: YalifMp04
gene synonym: cox1; cox1-i5; cox1-i7
number: 9
pseudo: true
SIO_010081: YalifMp04
subclass of: SO_0000673
so part of: YalifMp04
location: 23833..25182
location: region:23833-25182:1
so has part: feature:23833-25182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23833-25182:1:exon

YalifMp04
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1
alternative label: cox1-i5
alternative label: cox1-i7
gene: cox1-i9
locus tag: YalifMp04
gene synonym: cox1; cox1-i5; cox1-i7
number: 9
pseudo: true
SIO_010081: YalifMp04
subclass of: SO_0000673
so part of: YalifMp04
location: 23833..24003
location: region:23833-24003:1
so has part: feature:23833-24003:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23833-24003:1:exon

YalifMp03
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1
locus tag: YalifMp03
gene synonym: cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
number: 9
SIO_010081: YalifMp03
subclass of: SO_0000673
so part of: YalifMp03
location: 24004..25312
location: region:24004-25312:1
so has part: feature:24004-25312:1:exon

position:24004:1
position: 24004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25312:1
position: 25312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24004-25312:1:exon

YalifMp03
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cox1-i3
alternative label: cox1-i4
alternative label: cox1-i5
alternative label: cox1-i7
alternative label: cox1-i9
gene: cox1
locus tag: YalifMp03
gene synonym: cox1-i3; cox1-i4; cox1-i5; cox1-i7; cox1-i9
number: 10
SIO_010081: YalifMp03
subclass of: SO_0000673
so part of: YalifMp03
location: 25313..25609
location: region:25313-25609:1
so has part: feature:25313-25609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25313-25609:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 25849..25864
location: region:25849-25864:1
so has part: feature:25849-25864:1:region

position:25849:1
position: 25849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25864:1
position: 25864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25849-25864:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: transcriptional start site ATAAAATA
so part of: sequence
location: 25918..25926
location: region:25918-25926:1
so has part: feature:25918-25926:1:region

position:25918:1
position: 25918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25926:1
position: 25926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25918-25926:1:region

YalifMp12
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: atp8
locus tag: YalifMp12
so part of: sequence
location: 26072..26218
location: region:26072-26218:1
so has part: feature:26072-26218:1:exon
subclass of: SO_0000010

802621
type: Gene
SIO_000068: ncbigene

position:26072:1
position: 26072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26218:1
position: 26218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26072-26218:1:exon

YalifMp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: atp8
locus tag: YalifMp12
codon start: 1
transl table: 4
product: ATP8 protein
translation: MPQLVPFYFTNQIFYGFASLSVIVYLFSIYILPHYLEIYVTRIFITKT
SIO_010081: YalifMp12
subclass of: SO_0000673
so part of: YalifMp12
location: 26072..26218
location: region:26072-26218:1
so has part: feature:26072-26218:1:exon

NP_075432.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26072-26218:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 26491..26502
location: region:26491-26502:1
so has part: feature:26491-26502:1:region

position:26491:1
position: 26491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26502:1
position: 26502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26491-26502:1:region

YalifMp13
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: atp6
locus tag: YalifMp13
so part of: sequence
location: 26692..27459
location: region:26692-27459:1
so has part: feature:26692-27459:1:exon
subclass of: SO_0000010

802623
type: Gene
SIO_000068: ncbigene

position:26692:1
position: 26692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27459:1
position: 27459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26692-27459:1:exon

YalifMp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: atp6
locus tag: YalifMp13
codon start: 1
transl table: 4
product: ATP6 protein
translation: MNFIINSPLEQFTTRVYFGLSSGLINLDTITLTSFSIYSIAVVALILGFSILNDNNTNILPTRWSLAFESLYFTVEKMVSEQIGGLEGRLLFPFMFSLFMYILIANVVSLVPYSYAINAQLIWTIGLSVAIWIGCTLTGLANHGAKFFGLFLPSGTNLPLVPVLVIIELLSYIARALSLGLRLGSNILAGHLLLVILAGLILNFISISIFTFALGILPLSILLGIVALESAIAFIQAIVFTILTCSYIKDAIHLH
SIO_010081: YalifMp13
subclass of: SO_0000673
so part of: YalifMp13
location: 26692..27459
location: region:26692-27459:1
so has part: feature:26692-27459:1:exon

NP_075433.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26692-27459:1:exon

YalifMp14
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: cox3
locus tag: YalifMp14
so part of: sequence
location: 27760..29610
location: region:27760-29610:1
so has part: feature:27760-29610:1:exon
subclass of: SO_0000010

802599
type: Gene
SIO_000068: ncbigene

position:27760:1
position: 27760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29610:1
position: 29610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27760-29610:1:exon

YalifMp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: cox3
locus tag: YalifMp14
codon start: 1
transl table: 4
product: cytochrome c oxidase subunit 3
translation: MNLTLKKFQVHPFHLVAPSPWPILVSFSVMSIMLTLVFNMHGFMHNNYWVVFSAIVAIMTMALWFRDIISEATYLGDHTLAVRKGLNIGFILFVVSELFFFIAIFWAFFHSAMAPTIELGGVWPPVGIEAIGPSELPLLNTILLLCSGATLTWSHHALLGGNRFNTLLGLILTIALAVTFMICQYMEYSNAPFTISDGIFGSVFYFGTGFHGLHIIIGIIMLGVSLWRIYTYQLTNNHHVGYETSILYYHFVDVVWLFLYIVFYWWGT
SIO_010081: YalifMp14
subclass of: SO_0000673
so part of: YalifMp14
location: join(27760..28203,29248..29610)
location: region:27760-29610:1
so has part: feature:27760-28203:1:exon
so has part: feature:29248-29610:1:exon

NP_075434.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27760-28203:1:exon

position:28203:1
position: 28203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29248-29610:1:exon

position:29248:1
position: 29248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YalifMp14
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: cox3
locus tag: YalifMp14
number: 1
SIO_010081: YalifMp14
subclass of: SO_0000673
so part of: YalifMp14
location: 27760..28203
location: region:27760-28203:1
so has part: feature:27760-28203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27760-28203:1:exon

YalifMp14
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
gene: cox3
locus tag: YalifMp14
number: 1
SIO_010081: YalifMp14
subclass of: SO_0000673
so part of: YalifMp14
location: 28204..29247
location: region:28204-29247:1
so has part: feature:28204-29247:1:exon

position:28204:1
position: 28204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29247:1
position: 29247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28204-29247:1:exon

YalifMp15
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: cox3-i3
locus tag: YalifMp15
so part of: sequence
location: 28364..28921
location: region:28364-28921:1
so has part: feature:28364-28921:1:exon
subclass of: SO_0000010

802610
type: Gene
SIO_000068: ncbigene

position:28364:1
position: 28364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28921:1
position: 28921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28364-28921:1:exon

YalifMp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: cox3-i3
locus tag: YalifMp15
note: LAGLIDADG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: COX3-i1
translation: MEKDGNGSRFAFYQEKSNGEYLLHLHHIISSLGYCKPEIPKIHTRKGAKEGTIRYIYRLRSYTFSSFNWIHSSFYPNNRKVIPTNINLEDYITPLALAIWVMDDGYYHKNKGISFSTNSFTLDEIKYLGNILKSKYSLDYSIVKTGTINQYNIYIPKESAILLGKIIKKHLAPSMYYKIPVQCFL
SIO_010081: YalifMp15
subclass of: SO_0000673
so part of: YalifMp15
location: 28364..28921
location: region:28364-28921:1
so has part: feature:28364-28921:1:exon

NP_075435.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28364-28921:1:exon

YalifMp14
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: cox3
locus tag: YalifMp14
number: 2
SIO_010081: YalifMp14
subclass of: SO_0000673
so part of: YalifMp14
location: 29248..29610
location: region:29248-29610:1
so has part: feature:29248-29610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29248-29610:1:exon

YalifMp16
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: nd4
locus tag: YalifMp16
so part of: sequence
location: 29620..31080
location: region:29620-31080:1
so has part: feature:29620-31080:1:exon
subclass of: SO_0000010

802604
type: Gene
SIO_000068: ncbigene

position:29620:1
position: 29620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31080:1
position: 31080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29620-31080:1:exon

YalifMp16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: nd4
locus tag: YalifMp16
note: subunit ND4 of proton translocating NADH:ubiquinone oxidoreductase
codon start: 1
transl table: 4
product: ND4 protein
translation: MFLTSILLSSLYLFNRILAWQGNVKHFYLFASNLLLLFIVVLYINFNTFSNSFQFNFELFNSLNPFGLSNSDISNGLLFGIDGLSLTFILLTVLLIPLTLLGNWYNINFNSNLYYTLVLAIGLVILLNFWALDYISFYILFEATLPLLFILIHIYGSSDSERASFYVLMFTLSGSLFMLLSIVVISIVLNTTNFINHNLFVLSLDLQTIIWLGLFIAIMVKTPLFPIHVWLPVVHSESPLAGSMILAGLILKLALYAILRLLLPLLCEAQILYTPMIYIISLLTIILTSLATLRQIDLKVIIAYSSISHMGIAILGVCSNTSLGIYGSIVLGVAHGFVSPALFLIVGGILYDRYHIRIVNYYKGLTTYMPQLATYIIILSFANIGTPLTGNFTGEFLSLQGGFIRNPIIGGISCISVLLAAIYQLKLTNKLTGGISSIYMHRTNDVTIREKFIMNILIISTLIIGICPQIMYNLLYWTVNNYIYII
SIO_010081: YalifMp16
subclass of: SO_0000673
so part of: YalifMp16
location: 29620..31080
location: region:29620-31080:1
so has part: feature:29620-31080:1:exon

NP_075436.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29620-31080:1:exon

YalifMt51
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt51
so part of: sequence
location: 31272..31342
location: region:31272-31342:1
so has part: feature:31272-31342:1:exon
subclass of: SO_0000663

1500507
type: Gene
SIO_000068: ncbigene

position:31272:1
position: 31272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31342:1
position: 31342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31272-31342:1:exon

YalifMt51
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt51
product: tRNA-Trp
anticodon: (pos:31304..31306,aa:Trp,seq:tca)
codon recognized: UGA
SIO_010081: YalifMt51
subclass of: SO_0000673
so part of: YalifMt51
location: 31272..31342
location: region:31272-31342:1
so has part: feature:31272-31342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31272-31342:1:exon

YalifMt52
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt52
so part of: sequence
location: 31462..31543
location: region:31462-31543:1
so has part: feature:31462-31543:1:exon
subclass of: SO_0000663

1500508
type: Gene
SIO_000068: ncbigene

position:31462:1
position: 31462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31543:1
position: 31543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31462-31543:1:exon

YalifMt52
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt52
product: tRNA-Leu
SIO_010081: YalifMt52
subclass of: SO_0000673
so part of: YalifMt52
location: 31462..31543
location: region:31462-31543:1
so has part: feature:31462-31543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31462-31543:1:exon

YalifMt53
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt53
so part of: sequence
location: 31683..31753
location: region:31683-31753:1
so has part: feature:31683-31753:1:exon
subclass of: SO_0000663

1500509
type: Gene
SIO_000068: ncbigene

position:31683:1
position: 31683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31753:1
position: 31753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31683-31753:1:exon

YalifMt53
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt53
product: tRNA-Pro
anticodon: (pos:31715..31717,aa:Pro,seq:tgg)
codon recognized: CCA
SIO_010081: YalifMt53
subclass of: SO_0000673
so part of: YalifMt53
location: 31683..31753
location: region:31683-31753:1
so has part: feature:31683-31753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31683-31753:1:exon

YalifMp17
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: atp9
locus tag: YalifMp17
so part of: sequence
location: 31827..32057
location: region:31827-32057:1
so has part: feature:31827-32057:1:exon
subclass of: SO_0000010

802622
type: Gene
SIO_000068: ncbigene

position:31827:1
position: 31827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32057:1
position: 32057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31827-32057:1:exon

YalifMp17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: atp9
locus tag: YalifMp17
codon start: 1
transl table: 4
product: ATP synthetase subunit 9
translation: MQLVLAGKYIGAGLASIGLVGAGIGIAIVFAALINGVSRNPALKGQLFTYSILGFALSEATGLFALMIAFLLLYAV
SIO_010081: YalifMp17
subclass of: SO_0000673
so part of: YalifMp17
location: 31827..32057
location: region:31827-32057:1
so has part: feature:31827-32057:1:exon

NP_075437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31827-32057:1:exon

YalifMt54
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt54
so part of: sequence
location: 32092..32163
location: region:32092-32163:1
so has part: feature:32092-32163:1:exon
subclass of: SO_0000663

1500506
type: Gene
SIO_000068: ncbigene

position:32092:1
position: 32092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32163:1
position: 32163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32092-32163:1:exon

YalifMt54
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt54
product: tRNA-Tyr
anticodon: (pos:32123..32125,aa:Tyr,seq:ata)
codon recognized: UAU
SIO_010081: YalifMt54
subclass of: SO_0000673
so part of: YalifMt54
location: 32092..32163
location: region:32092-32163:1
so has part: feature:32092-32163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32092-32163:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 32371..32379
location: region:32371-32379:1
so has part: feature:32371-32379:1:region

position:32371:1
position: 32371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32379:1
position: 32379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32371-32379:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 32383..32391
location: region:32383-32391:1
so has part: feature:32383-32391:1:region

position:32383:1
position: 32383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32391:1
position: 32391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32383-32391:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 4952
regulatory class: other
note: potential transcriptional start site ATAAAATA
so part of: sequence
location: 32397..32405
location: region:32397-32405:1
so has part: feature:32397-32405:1:region

position:32397:1
position: 32397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32405:1
position: 32405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32397-32405:1:region

YalifMp18
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: cox2
locus tag: YalifMp18
so part of: sequence
location: 32582..33310
location: region:32582-33310:1
so has part: feature:32582-33310:1:exon
subclass of: SO_0000010

802608
type: Gene
SIO_000068: ncbigene

position:32582:1
position: 32582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33310:1
position: 33310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32582-33310:1:exon

YalifMp18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: cox2
locus tag: YalifMp18
codon start: 1
transl table: 4
product: cytochrome c oxidase subunit 2
translation: MFKIFNDVPVPYGLYFQDSATPTFDGIIELHDIVMFYIVVTIVLVSYLLFVIIKNFSNDHISYKYLTHGTTLEIVWTIFPVVILLFIAFPSFILLYLCDEVIDPAMTIKAIASQWYWTYEYSDFIGETGEIVQFDSYIVPTDMLENGQLRMLDVDARIVVPTNTHLRFIVTSRDVIHDFALPSLGIKCDATPGRLNQVSALLQRESVYYGQCSELCGVLHSSMPIALEAVSIDKFLSWLDEQ
SIO_010081: YalifMp18
subclass of: SO_0000673
so part of: YalifMp18
location: 32582..33310
location: region:32582-33310:1
so has part: feature:32582-33310:1:exon

NP_075438.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32582-33310:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 33348..33363
location: region:33348-33363:1
so has part: feature:33348-33363:1:region

position:33348:1
position: 33348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33363:1
position: 33363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33348-33363:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 33411..33422
location: region:33411-33422:1
so has part: feature:33411-33422:1:region

position:33411:1
position: 33411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33422:1
position: 33422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33411-33422:1:region

YalifMp19
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: nd4L
locus tag: YalifMp19
so part of: sequence
location: 33568..33837
location: region:33568-33837:1
so has part: feature:33568-33837:1:exon
subclass of: SO_0000010

802609
type: Gene
SIO_000068: ncbigene

position:33568:1
position: 33568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33837:1
position: 33837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33568-33837:1:exon

YalifMp19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: nd4L
locus tag: YalifMp19
note: subunit 4L of proton translocating NADH:ubiquinone oxidoreductase
codon start: 1
transl table: 4
product: ND4L protein
translation: MFIGTIILVLSFLGFVFNRRNIILAFICLETMLLGINLILLRNSVLFDDISGSLFAIVIIILAGVESAIGLSLLVSYYRLRGVINSYGI
SIO_010081: YalifMp19
subclass of: SO_0000673
so part of: YalifMp19
location: 33568..33837
location: region:33568-33837:1
so has part: feature:33568-33837:1:exon

NP_075439.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33568-33837:1:exon

YalifMp20
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: nd1-i2
gene: nd5
locus tag: YalifMp20
gene synonym: nd1-i2
so part of: sequence
location: 33838..38325
location: region:33838-38325:1
so has part: feature:33838-38325:1:exon
subclass of: SO_0000010

802624
type: Gene
SIO_000068: ncbigene

position:33838:1
position: 33838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38325:1
position: 38325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33838-38325:1:exon

YalifMp20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
alternative label: nd1-i2
gene: nd5
locus tag: YalifMp20
gene synonym: nd1-i2
note: subunit ND5 of proton translocating NADH:ubiquinone oxidoreductase
codon start: 1
transl table: 4
product: ND5 protein
translation: MYNAISLIIILPCISWLFPLFFGRQLGYVFVTRMTSTLIIITTLITYYYFYQLLGNNNPINLELFNYLNIDYLDINYNFEIDALTITMLLAITTISSMVHIYSIGYMETDPHQVRFFSLLSMFTFWMIILVTGSNYFVLFVGWEFIGVTSYLLISFWVTRLQAMKSALSAVLMNRFGDAFFVLGLCVIAYVFGTLNYSTIFATAYLINTDLLVLIMLALFIAAMAKSAQFGLHNWLTLAMEGPTPVSSLLHAATLVTAGIYLLLRSANILEYTPTVLFIILWIGALTTLSAGLIAICSNDLKRIIALSTMSQLGMMTIAIGLSAYNLALFHLLGHAFFKALLFMSAGSIIHSILNESQDIRTYGGLLSYLPYTYICITIASLSLMAMPGLTGYYTKDIIIESTYGSYSISNYVVYWIAYLSAVLTCVYSMKILYLTFYSNPNNNTITYYNAHESNIYITLPMFILAIFAMFAGWILKDIYLGVGTDFVGTHILPNNFSYFDTEFSITQFYKLLPLISAILVSILIVVLNEFFAIVFNLNNKYINTVYSIFNQKLVSDQILNHFIIFKGLVTSGNIAHHVDKGSLYRLGPVGINRLLNKASYNVINLSSNTRSSLSMNSMLILITIVSLLLLVLVMNVNFIIVIPVLISILYILFS
SIO_010081: YalifMp20
subclass of: SO_0000673
so part of: YalifMp20
location: join(33838..34563,35780..35986,37291..38325)
location: region:33838-38325:1
so has part: feature:33838-34563:1:exon
so has part: feature:35780-35986:1:exon
so has part: feature:37291-38325:1:exon

NP_075440.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33838-34563:1:exon

position:34563:1
position: 34563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35780-35986:1:exon

position:35780:1
position: 35780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35986:1
position: 35986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37291-38325:1:exon

position:37291:1
position: 37291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YalifMp21
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: nd1-i2
locus tag: YalifMp21
so part of: sequence
location: 33838..37222
location: region:33838-37222:1
so has part: feature:33838-37222:1:exon
subclass of: SO_0000010

802600
type: Gene
SIO_000068: ncbigene

position:37222:1
position: 37222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33838-37222:1:exon

YalifMp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: nd1-i2
locus tag: YalifMp21
note: LAGLIDADG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: ND1-i2 protein
translation: MYNAISLIIILPCISWLFPLFFGRQLGYVFVTRMTSTLIIITTLITYYYFYQLLGNNNPINLELFNYLNIDYLDINYNFEIDALTITMLLAITTISSMVHIYSIGYMETDPHQVRFFSLLSMFTFWMIILVTGSNYFVLFVGWEFIGVTSYLLISFWVTRLQAMKSALSAVLMNRFGDAFFVLGLCVIAYVFGTLNYSTIFATAYLINTDLLVLIMLALFIAAMAKSAQFGLHNWLTLAMEGPTPVSSLLHAATLVTAGIYLLLRSANILEYTPTVLFIILWIGALTTLSAGLIAICSNDLKRIIALSTMSQLARKNLIMILRKQSICVEFIISPIINNSQVTKALYYIYKYKYNNNNNYFFNSYFALRLLKEELWKVNIISQLVGTSEAIRLLSNIYTNINKRYISIKHFIINRLLFINISILTKRIRVYTKNKKKSSYNNYKYDSILTKSSNNFLINRVGIRHNSNIIKSKDINIELKPIKKDLVEHKKFVQWLAGLIDGDGHFNKSKQGRSALLITMDIRDQGLLFEIKHKYGGHIRKIAGANAVRYDLRQDKGLINLLKDVNGLIRNPKRLLQMNILCKHYNIETKFSKPLTYYDGWLAGIIDSDGSIYFNKSSGQLFISVSQKEKHILDPLISIYGGRIDFSNSKKDSYKYIIYRKKEVLNLLDNYFKHYQLRSAKDIRIKMIPKLYELYIYRNKPEEVVKYAEWISFLDKWNKIVR
SIO_010081: YalifMp21
subclass of: SO_0000673
so part of: YalifMp21
location: join(33838..34563,35780..37222)
location: region:33838-37222:1
so has part: feature:33838-34563:1:exon
so has part: feature:35780-37222:1:exon

NP_075441.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33838-34563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35780-37222:1:exon

YalifMp22
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: nd5-i1
locus tag: YalifMp22
so part of: sequence
location: 33838..35604
location: region:33838-35604:1
so has part: feature:33838-35604:1:exon
subclass of: SO_0000010

802612
type: Gene
SIO_000068: ncbigene

position:35604:1
position: 35604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33838-35604:1:exon

YalifMp22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: nd5-i1
locus tag: YalifMp22
note: LAGLIDADG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: ND5-i1 protein
translation: MYNAISLIIILPCISWLFPLFFGRQLGYVFVTRMTSTLIIITTLITYYYFYQLLGNNNPINLELFNYLNIDYLDINYNFEIDALTITMLLAITTISSMVHIYSIGYMETDPHQVRFFSLLSMFTFWMIILVTGSNYFVLFVGWEFIGVTSYLLISFWVTRLQAMKSALSAVLMNRFGDAFFVLGLCVIAYVFGTLNYSTIFATAYLINTDLLVLIMLALFIAAMAKSAQFGLHNWLTLAMEGWNNRALLKFHYIREYPQLVLIIINGLRLIKLLWSTHLKLVFGIIHNMGQFVGNCTYLLKFTNTNLIKNIGASETTCETLLTNNLTNNIIDDKFKHWLIGFTEGDGSFIVSNRGYCEFKLTQSSIDSQVLYKIKNELGLGHVAVQDKNNSTHHLRIRDKVGNKKIIDIFNGNLHTEAKIKQFKYFLNCYNKAYGINIEYIENNKPVTLNNGWLSGFTDAEGCFNAYISKENLNKKNRSVQIRYILSQKGDKILMDNIANLLGGSVSHLKAYNGYNMTVNLTKLKPIIEYFNEYTLLTKKTISYNIWLKMYYITINKEHITSSTTDGTIDLNKLLALKEELTKANKIK
SIO_010081: YalifMp22
subclass of: SO_0000673
so part of: YalifMp22
location: 33838..35604
location: region:33838-35604:1
so has part: feature:33838-35604:1:exon

NP_075442.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33838-35604:1:exon

YalifMp21
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: nd1-i2
locus tag: YalifMp21
number: 1
SIO_010081: YalifMp21
subclass of: SO_0000673
so part of: YalifMp21
location: 33838..34563
location: region:33838-34563:1
so has part: feature:33838-34563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33838-34563:1:exon

YalifMp21
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
gene: nd1-i2
locus tag: YalifMp21
number: 1
SIO_010081: YalifMp21
subclass of: SO_0000673
so part of: YalifMp21
location: 34564..35779
location: region:34564-35779:1
so has part: feature:34564-35779:1:exon

position:34564:1
position: 34564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35779:1
position: 35779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34564-35779:1:exon

YalifMp21
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
gene: nd1-i2
locus tag: YalifMp21
note: GC cluster
SIO_010081: YalifMp21
subclass of: SO_0000673
so part of: YalifMp21
location: 35641..35649
location: region:35641-35649:1
so has part: feature:35641-35649:1:exon

position:35641:1
position: 35641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35649:1
position: 35649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35641-35649:1:exon

YalifMp21
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
gene: nd1-i2
locus tag: YalifMp21
note: GC cluster
SIO_010081: YalifMp21
subclass of: SO_0000673
so part of: YalifMp21
location: 35663..35673
location: region:35663-35673:1
so has part: feature:35663-35673:1:exon

position:35663:1
position: 35663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35673:1
position: 35673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35663-35673:1:exon

YalifMp21
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: nd1-i2
locus tag: YalifMp21
number: 2
SIO_010081: YalifMp21
subclass of: SO_0000673
so part of: YalifMp21
location: 35780..37222
location: region:35780-37222:1
so has part: feature:35780-37222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35780-37222:1:exon

YalifMp21
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: nd1-i2
locus tag: YalifMp21
number: 2
SIO_010081: YalifMp21
subclass of: SO_0000673
so part of: YalifMp21
location: 35780..35986
location: region:35780-35986:1
so has part: feature:35780-35986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35780-35986:1:exon

YalifMp20
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: nd1-i2
gene: nd5
locus tag: YalifMp20
gene synonym: nd1-i2
number: 2
SIO_010081: YalifMp20
subclass of: SO_0000673
so part of: YalifMp20
location: 35987..37290
location: region:35987-37290:1
so has part: feature:35987-37290:1:exon

position:35987:1
position: 35987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37290:1
position: 37290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35987-37290:1:exon

YalifMp20
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: nd1-i2
gene: nd5
locus tag: YalifMp20
gene synonym: nd1-i2
number: 3
SIO_010081: YalifMp20
subclass of: SO_0000673
so part of: YalifMp20
location: 37291..38325
location: region:37291-38325:1
so has part: feature:37291-38325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37291-38325:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 38556..38566
location: region:38556-38566:1
so has part: feature:38556-38566:1:region

position:38556:1
position: 38556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38566:1
position: 38566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38556-38566:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
note: GC cluster
so part of: sequence
location: 38600..38609
location: region:38600-38609:1
so has part: feature:38600-38609:1:region

position:38600:1
position: 38600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38609:1
position: 38609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38600-38609:1:region

YalifMt55
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt55
so part of: sequence
location: 38715..38793
location: region:38715-38793:1
so has part: feature:38715-38793:1:exon
subclass of: SO_0000663

1500502
type: Gene
SIO_000068: ncbigene

position:38715:1
position: 38715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38793:1
position: 38793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38715-38793:1:exon

YalifMt55
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt55
product: tRNA-Ser
anticodon: (pos:38747..38749,aa:Ser,seq:gct)
codon recognized: AGC
SIO_010081: YalifMt55
subclass of: SO_0000673
so part of: YalifMt55
location: 38715..38793
location: region:38715-38793:1
so has part: feature:38715-38793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38715-38793:1:exon

YalifMt56
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt56
so part of: sequence
location: 38829..38899
location: region:38829-38899:1
so has part: feature:38829-38899:1:exon
subclass of: SO_0000663

1500503
type: Gene
SIO_000068: ncbigene

position:38829:1
position: 38829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38899:1
position: 38899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38829-38899:1:exon

YalifMt56
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt56
product: tRNA-Arg
SIO_010081: YalifMt56
subclass of: SO_0000673
so part of: YalifMt56
location: 38829..38899
location: region:38829-38899:1
so has part: feature:38829-38899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38829-38899:1:exon

YalifMp23
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cob-i2
alternative label: cob-i3
alternative label: cob-i4
gene: cob
locus tag: YalifMp23
gene synonym: cob-i2; cob-i3; cob-i4
so part of: sequence
location: 39051..45791
location: region:39051-45791:1
so has part: feature:39051-45791:1:exon
subclass of: SO_0000010

802619
type: Gene
SIO_000068: ncbigene

position:39051:1
position: 39051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45791:1
position: 45791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39051-45791:1:exon

YalifMp23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
alternative label: cob-i2
alternative label: cob-i3
alternative label: cob-i4
gene: cob
locus tag: YalifMp23
gene synonym: cob-i2; cob-i3; cob-i4
note: apocytochrome b
codon start: 1
transl table: 4
product: COB protein
translation: MALRKKNSLLNMANSYVLDSPQPSNLNYFWNFGSLLALCLVIQLATGITLAMHYTSHASLAFDSVEHIMRDVNFGWFIRYAHANTASFFFICIYAHMGRNIYYGSYKTPRVLPWSIGVIIFLLLIITAFMGYVLVFGQMSLWGATVICNLVSAIPWLGEDIVHFLWGGFSVGNPTLQRFFALHYLMPFVLAVFALLHLIALHTAGSSNPLGITSNVDKLSMHPYYSFKDLITVFAFLLMFTLFVFFSPDKLGHPDNYIPANPMVTPASIVPEWYLLPFYAILRAIPDKLGGVIAMVAAILILLILPIVDRSIIRGNAFKPISKLLFGFFICNFLLLGVLGQVHIEPPFIVLGQICTIFYFSYFLILLPMVSTIENIFFYIGSLRK
SIO_010081: YalifMp23
subclass of: SO_0000673
so part of: YalifMp23
location: join(39051..39479,40861..40937,42188..42437,43714..43763,45440..45791)
location: region:39051-45791:1
so has part: feature:39051-39479:1:exon
so has part: feature:40861-40937:1:exon
so has part: feature:42188-42437:1:exon
so has part: feature:43714-43763:1:exon
so has part: feature:45440-45791:1:exon

NP_075443.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39051-39479:1:exon

position:39479:1
position: 39479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40861-40937:1:exon

position:40861:1
position: 40861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40937:1
position: 40937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42188-42437:1:exon

position:42188:1
position: 42188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42437:1
position: 42437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43714-43763:1:exon

position:43714:1
position: 43714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43763:1
position: 43763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:45440-45791:1:exon

position:45440:1
position: 45440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YalifMp24
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cob
alternative label: cob-i3
gene: cob-i4
locus tag: YalifMp24
gene synonym: cob; cob-i3
pseudo: true
so part of: sequence
location: 39051..45079
location: region:39051-45079:1
so has part: feature:39051-45079:1:exon

1498568
type: Gene
SIO_000068: ncbigene

position:45079:1
position: 45079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39051-45079:1:exon

YalifMp24
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
alternative label: cob
alternative label: cob-i3
gene: cob-i4
locus tag: YalifMp24
gene synonym: cob; cob-i3
note: COB-i4 protein
pseudo: true
SIO_010081: YalifMp24
subclass of: SO_0000673
so part of: YalifMp24
location: 39051..45079
location: region:39051-45079:1
so has part: feature:39051-45079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39051-45079:1:exon

YalifMp25
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
alternative label: cob
alternative label: cob-i2
alternative label: cob-i4
gene: cob-i3
locus tag: YalifMp25
gene synonym: cob; cob-i2; cob-i4
pseudo: true
so part of: sequence
location: 39051..43196
location: region:39051-43196:1
so has part: feature:39051-43196:1:exon

1498567
type: Gene
SIO_000068: ncbigene

position:43196:1
position: 43196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39051-43196:1:exon

YalifMp25
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
alternative label: cob
alternative label: cob-i2
alternative label: cob-i4
gene: cob-i3
locus tag: YalifMp25
gene synonym: cob; cob-i2; cob-i4
note: COB-i3 protein
pseudo: true
SIO_010081: YalifMp25
subclass of: SO_0000673
so part of: YalifMp25
location: 39051..43196
location: region:39051-43196:1
so has part: feature:39051-43196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39051-43196:1:exon

YalifMp26
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: cob-i2
locus tag: YalifMp26
pseudo: true
so part of: sequence
location: 39051..42105
location: region:39051-42105:1
so has part: feature:39051-42105:1:exon

1498566
type: Gene
SIO_000068: ncbigene

position:42105:1
position: 42105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39051-42105:1:exon

YalifMp26
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 4952
gene: cob-i2
locus tag: YalifMp26
note: COB-i2 protein;LAGLIDADG type class 1 intron encoded endonuclease
pseudo: true
SIO_010081: YalifMp26
subclass of: SO_0000673
so part of: YalifMp26
location: 39051..42105
location: region:39051-42105:1
so has part: feature:39051-42105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39051-42105:1:exon

YalifMp27
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: cob-i1
locus tag: YalifMp27
so part of: sequence
location: 39051..40292
location: region:39051-40292:1
so has part: feature:39051-40292:1:exon
subclass of: SO_0000010

802618
type: Gene
SIO_000068: ncbigene

position:40292:1
position: 40292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39051-40292:1:exon

YalifMp27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: cob-i1
locus tag: YalifMp27
note: LAGLIDADG type class 1 intron encoded endonuclease
codon start: 1
transl table: 4
product: COB-i1 protein
translation: MALRKKNSLLNMANSYVLDSPQPSNLNYFWNFGSLLALCLVIQLATGITLAMHYTSHASLAFDSVEHIMRDVNFGWFIRYAHANTASFFFICIYAHMGRNIYYGSYKTPRVLPWSIGVIIFLLLIITAFMGYVLVFGQMSLWGKYIASNVFILMLILNVNLLYIIYDIIYNTILNLFKLYIKKSTNNLILNHEPILYRKDVTNYIGPLNSDIISIIYGTLLGDGNAEKRTVVGGTRINIYQEGSHKSYLLYLHSLFANLGYCNTKIPNITTRLGNKGKIRKIIRFSTWSYHSFNFIYQAWYIKTNKGFIKILPKNIEYFLNPLSMAIWIMDDGKKVGEGLKIATNNFTSEEVNILVSIITRKFNLKCVKQSSGSKNQYIIYFWKESIPDLWNLVKDHIEPSMKYKFGDVISNI
SIO_010081: YalifMp27
subclass of: SO_0000673
so part of: YalifMp27
location: 39051..40292
location: region:39051-40292:1
so has part: feature:39051-40292:1:exon

NP_075444.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39051-40292:1:exon

YalifMp27
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: cob-i1
locus tag: YalifMp27
number: 1
SIO_010081: YalifMp27
subclass of: SO_0000673
so part of: YalifMp27
location: 39051..39479
location: region:39051-39479:1
so has part: feature:39051-39479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39051-39479:1:exon

YalifMp26
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
gene: cob-i2
locus tag: YalifMp26
number: 1
pseudo: true
SIO_010081: YalifMp26
subclass of: SO_0000673
so part of: YalifMp26
location: 39480..40860
location: region:39480-40860:1
so has part: feature:39480-40860:1:exon

position:39480:1
position: 39480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40860:1
position: 40860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39480-40860:1:exon

YalifMp26
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: cob-i2
locus tag: YalifMp26
number: 2
pseudo: true
SIO_010081: YalifMp26
subclass of: SO_0000673
so part of: YalifMp26
location: 40861..42105
location: region:40861-42105:1
so has part: feature:40861-42105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40861-42105:1:exon

YalifMp26
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
gene: cob-i2
locus tag: YalifMp26
number: 2
pseudo: true
SIO_010081: YalifMp26
subclass of: SO_0000673
so part of: YalifMp26
location: 40861..40937
location: region:40861-40937:1
so has part: feature:40861-40937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40861-40937:1:exon

YalifMp25
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cob
alternative label: cob-i2
alternative label: cob-i4
gene: cob-i3
locus tag: YalifMp25
gene synonym: cob; cob-i2; cob-i4
number: 2
pseudo: true
SIO_010081: YalifMp25
subclass of: SO_0000673
so part of: YalifMp25
location: 40938..42187
location: region:40938-42187:1
so has part: feature:40938-42187:1:exon

position:40938:1
position: 40938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42187:1
position: 42187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40938-42187:1:exon

YalifMp26
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4952
gene: cob-i2
locus tag: YalifMp26
note: GC rich cluster; potential minitransposon
pseudo: true
rpt type: inverted
SIO_010081: YalifMp26
subclass of: SO_0000673
so part of: YalifMp26
location: 41258..41305
location: region:41258-41305:1
so has part: feature:41258-41305:1:exon

position:41258:1
position: 41258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41305:1
position: 41305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41258-41305:1:exon

YalifMp26
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4952
gene: cob-i2
locus tag: YalifMp26
note: GC rich cluster; potential minitransposon
pseudo: true
rpt type: inverted
SIO_010081: YalifMp26
subclass of: SO_0000673
so part of: YalifMp26
location: 41822..41869
location: region:41822-41869:1
so has part: feature:41822-41869:1:exon

position:41822:1
position: 41822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41869:1
position: 41869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41822-41869:1:exon

YalifMp25
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cob
alternative label: cob-i2
alternative label: cob-i4
gene: cob-i3
locus tag: YalifMp25
gene synonym: cob; cob-i2; cob-i4
number: 3
pseudo: true
SIO_010081: YalifMp25
subclass of: SO_0000673
so part of: YalifMp25
location: 42188..43196
location: region:42188-43196:1
so has part: feature:42188-43196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42188-43196:1:exon

YalifMp25
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cob
alternative label: cob-i2
alternative label: cob-i4
gene: cob-i3
locus tag: YalifMp25
gene synonym: cob; cob-i2; cob-i4
number: 3
pseudo: true
SIO_010081: YalifMp25
subclass of: SO_0000673
so part of: YalifMp25
location: 42188..42437
location: region:42188-42437:1
so has part: feature:42188-42437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42188-42437:1:exon

YalifMp24
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cob
alternative label: cob-i3
gene: cob-i4
locus tag: YalifMp24
gene synonym: cob; cob-i3
number: 3
pseudo: true
SIO_010081: YalifMp24
subclass of: SO_0000673
so part of: YalifMp24
location: 42438..43713
location: region:42438-43713:1
so has part: feature:42438-43713:1:exon

position:42438:1
position: 42438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43713:1
position: 43713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42438-43713:1:exon

YalifMt58
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt58
so part of: sequence
location: 42468..42550
location: region:42468-42550:1
so has part: feature:42468-42550:1:exon
subclass of: SO_0000663

5618851
type: Gene
SIO_000068: ncbigene

position:42468:1
position: 42468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42550:1
position: 42550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42468-42550:1:exon

YalifMt58
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt58
product: tRNA-Ser
pseudo: true
anticodon: (pos:42503..42505,aa:Ser,seq:gga)
codon recognized: UCC
SIO_010081: YalifMt58
subclass of: SO_0000673
so part of: YalifMt58
location: 42468..42550
location: region:42468-42550:1
so has part: feature:42468-42550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42468-42550:1:exon

YalifMp24
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cob
alternative label: cob-i3
gene: cob-i4
locus tag: YalifMp24
gene synonym: cob; cob-i3
number: 4
pseudo: true
SIO_010081: YalifMp24
subclass of: SO_0000673
so part of: YalifMp24
location: 43714..45079
location: region:43714-45079:1
so has part: feature:43714-45079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43714-45079:1:exon

YalifMp24
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cob
alternative label: cob-i3
gene: cob-i4
locus tag: YalifMp24
gene synonym: cob; cob-i3
number: 4
pseudo: true
SIO_010081: YalifMp24
subclass of: SO_0000673
so part of: YalifMp24
location: 43714..43763
location: region:43714-43763:1
so has part: feature:43714-43763:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43714-43763:1:exon

YalifMp23
type: Intron
subclass of: SO_0000188
RO_0002162: 4952
alternative label: cob-i2
alternative label: cob-i3
alternative label: cob-i4
gene: cob
locus tag: YalifMp23
gene synonym: cob-i2; cob-i3; cob-i4
number: 4
SIO_010081: YalifMp23
subclass of: SO_0000673
so part of: YalifMp23
location: 43764..45439
location: region:43764-45439:1
so has part: feature:43764-45439:1:exon

position:43764:1
position: 43764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45439:1
position: 45439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43764-45439:1:exon

YalifMp23
type: Exon
subclass of: SO_0000147
RO_0002162: 4952
alternative label: cob-i2
alternative label: cob-i3
alternative label: cob-i4
gene: cob
locus tag: YalifMp23
gene synonym: cob-i2; cob-i3; cob-i4
number: 5
SIO_010081: YalifMp23
subclass of: SO_0000673
so part of: YalifMp23
location: 45440..45791
location: region:45440-45791:1
so has part: feature:45440-45791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45440-45791:1:exon

YalifMp28
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: nd2
locus tag: YalifMp28
so part of: sequence
location: 45833..47242
location: region:45833-47242:1
so has part: feature:45833-47242:1:exon
subclass of: SO_0000010

802601
type: Gene
SIO_000068: ncbigene

position:45833:1
position: 45833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47242:1
position: 47242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45833-47242:1:exon

YalifMp28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: nd2
locus tag: YalifMp28
note: subunit ND2 of proton translocating NADH:ubiquinone oxidoreductase
codon start: 1
transl table: 4
product: ND2 protein
translation: MLILAIISLITFVSMSKLSDNRAIIRLINIYLILVLVLDSFLYLLFLNNQTYTVMGELLIFNSFTFYIDMLIYFIMIVISSLYGYNLYNNNLYKTLFEPKKELIILFLINILGALLIVHSNDFITLFVAIELQSYSIYLITAIYNSSYKASKASMLYFFMGGILSILIAYSINTYYSVLNSYTLHSLDSLIINTLDLNLILIALSLGLLFKIGIAPLHKWLISIYENTPILITIYISLIPKISILSYLVLSNISINSLVISILAILTLLVGSVGGLLQIKIKRLLAFSGLTNAGYMMLLLLLNNNEFSYLYYITQYSISHLAIFMIIIFSIYYINYINNQYNPIIYVNQLKGLIHDNAYLVLSMAIVVFSFIGIPPLLGFFGKLNILMSILNNGYYFISIVLIVASLISALYYLYLLNVSIQDKNNILINSNETVSSVLSYILSSLIILITFGFIYNSLIIDIFNVYFN
SIO_010081: YalifMp28
subclass of: SO_0000673
so part of: YalifMp28
location: 45833..47242
location: region:45833-47242:1
so has part: feature:45833-47242:1:exon

NP_075445.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45833-47242:1:exon

YalifMp29
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
gene: nd3
locus tag: YalifMp29
so part of: sequence
location: 47262..47648
location: region:47262-47648:1
so has part: feature:47262-47648:1:exon
subclass of: SO_0000010

802603
type: Gene
SIO_000068: ncbigene

position:47262:1
position: 47262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47648:1
position: 47648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47262-47648:1:exon

YalifMp29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4952
gene: nd3
locus tag: YalifMp29
note: subunit ND3 of proton translocating NADH:ubiquinone oxidoreductase
codon start: 1
transl table: 4
product: ND3 protein
translation: MNTFIIFIILIPIVGFALLAVNILLAVYKPYNEKLGAFECGLTSFNQTRLAFNAAFILVAILFLPFDLEISTLLPYVMSIYLVSNYGFTIVLLFLLILIIGFVYEINTNALKINKHNKPNTDSLIYKL
SIO_010081: YalifMp29
subclass of: SO_0000673
so part of: YalifMp29
location: 47262..47648
location: region:47262-47648:1
so has part: feature:47262-47648:1:exon

NP_075446.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47262-47648:1:exon

YalifMt57
type: Gene
subclass of: SO_0000704
RO_0002162: 4952
locus tag: YalifMt57
so part of: sequence
location: 47755..47832
location: region:47755-47832:1
so has part: feature:47755-47832:1:exon
subclass of: SO_0000663

1500499
type: Gene
SIO_000068: ncbigene

position:47755:1
position: 47755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47832:1
position: 47832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47755-47832:1:exon

YalifMt57
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4952
locus tag: YalifMt57
product: tRNA-Ile
SIO_010081: YalifMt57
subclass of: SO_0000673
so part of: YalifMt57
location: 47755..47832
location: region:47755-47832:1
so has part: feature:47755-47832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47755-47832:1:exon