Komagataeibacter xylinus strain DSM 2325 plasmid unnamed2, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.
Genomic analysis and metabolic reconstruction of Komagataeibacter xylinus DSM 2325 producing bacterial cellulose nanofiber
Submitted (10-DEC-2017) BioInformatics Research Center, KAIST, 291 Daehak-ro, Daejeon 34141, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP025271.1.\nBacteria and source DNA available from DSMZ.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3; SPAdes v. 3.6.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1724.0x\nSequencing Technology :: PacBio; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/09/2023 01:28:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,586\nCDSs (total) :: 3,513\nGenes (coding) :: 3,405\nCDSs (with protein) :: 3,405\nGenes (RNA) :: 73\nrRNAs :: 4, 5, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 5, 4 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 4\nPseudo Genes (total) :: 108\nCDSs (without protein) :: 108\nPseudo Genes (ambiguous residues) :: 0 of 108\nPseudo Genes (frameshifted) :: 27 of 108\nPseudo Genes (incomplete) :: 87 of 108\nPseudo Genes (internal stop) :: 17 of 108\nPseudo Genes (multiple problems) :: 19 of 108\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0006260 - DNA replication [Evidence IEA]; GO:0006276 - plasmid maintenance [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF015354.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019092403.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092405.1
COORDINATES: similar to AA sequence:RefSeq:WP_010668484.1
COORDINATES: similar to AA sequence:RefSeq:WP_013789853.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_019092408.1