Komagataeibacter xylinus strain DSM 2325 plasmid unnamed1.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.
Genomic analysis and metabolic reconstruction of Komagataeibacter xylinus DSM 2325 producing bacterial cellulose nanofiber
Submitted (10-DEC-2017) BioInformatics Research Center, KAIST, 291 Daehak-ro, Daejeon 34141, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP025270.1.\nBacteria and source DNA available from DSMZ.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3; SPAdes v. 3.6.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1724.0x\nSequencing Technology :: PacBio; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/09/2023 01:28:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,586\nCDSs (total) :: 3,513\nGenes (coding) :: 3,405\nCDSs (with protein) :: 3,405\nGenes (RNA) :: 73\nrRNAs :: 4, 5, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 5, 4 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 4\nPseudo Genes (total) :: 108\nCDSs (without protein) :: 108\nPseudo Genes (ambiguous residues) :: 0 of 108\nPseudo Genes (frameshifted) :: 27 of 108\nPseudo Genes (incomplete) :: 87 of 108\nPseudo Genes (internal stop) :: 17 of 108\nPseudo Genes (multiple problems) :: 19 of 108\n##Genome-Annotation-Data-END##
COORDINATES: ab initio prediction:GeneMarkS-2+
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_007396037.1
GO:0004803 - transposase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007396592.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106785.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010515640.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014106783.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
nuclease-related domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010511730.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511729.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014106779.1
GO:0006260 - DNA replication [Evidence IEA]
DUF3991 and TOPRIM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014106778.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019092660.1
COORDINATES: similar to AA sequence:RefSeq:WP_010512534.1
COORDINATES: similar to AA sequence:RefSeq:WP_010512535.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106774.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106773.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010515653.1
COORDINATES: similar to AA sequence:RefSeq:WP_011578756.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012553751.1
COORDINATES: similar to AA sequence:RefSeq:WP_048859179.1
COORDINATES: similar to AA sequence:RefSeq:WP_010515656.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087510.1
GO:0003824 - catalytic activity [Evidence IEA]
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007400686.1
COORDINATES: similar to AA sequence:RefSeq:WP_010515659.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106765.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_010515661.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017183650.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010512186.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406709.1
COORDINATES: similar to AA sequence:RefSeq:WP_010515666.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012778787.1
COORDINATES: similar to AA sequence:RefSeq:WP_043766075.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396168.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396167.1
COORDINATES: similar to AA sequence:RefSeq:WP_010510833.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516316.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_010510838.1
COORDINATES: similar to AA sequence:RefSeq:WP_018075458.1
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012813325.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516858.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_014456903.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019088001.1
COORDINATES: protein motif:HMM:NF013053.2
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_019086881.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019086880.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_010511320.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019091889.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091888.1
COORDINATES: similar to AA sequence:RefSeq:WP_010512005.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
thiamine pyrophosphate-requiring protein
COORDINATES: similar to AA sequence:RefSeq:WP_019091886.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091885.1
COORDINATES: similar to AA sequence:RefSeq:WP_013590524.1
gluconate 2-dehydrogenase subunit 3 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006611562.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008851031.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007396398.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092315.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019092244.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396149.1
COORDINATES: similar to AA sequence:RefSeq:WP_010506913.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0008941 - nitric oxide dioxygenase activity [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]
GO:0051409 - response to nitrosative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019092494.1
COORDINATES: similar to AA sequence:RefSeq:WP_012702140.1
COORDINATES: similar to AA sequence:RefSeq:WP_010517939.1
COORDINATES: similar to AA sequence:RefSeq:WP_012812328.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516674.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010516408.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516406.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516404.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012223140.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516402.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019092386.1
ClC family H(+)/Cl(-) exchange transporter
COORDINATES: similar to AA sequence:RefSeq:WP_007396120.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012553267.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019092431.1
COORDINATES: similar to AA sequence:RefSeq:WP_010517701.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092393.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0003957 - NAD(P)+ transhydrogenase (B-specific) activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019089575.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611353.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511771.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_010511772.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087242.1
COORDINATES: protein motif:HMM:NF024685.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611628.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018860470.1
COORDINATES: similar to AA sequence:RefSeq:WP_012812390.1
IS1380-like element IS1380A family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_012553781.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092710.1
COORDINATES: protein motif:HMM:NF037432.2
HEPN/Toprim-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019092214.1
COORDINATES: similar to AA sequence:RefSeq:WP_018307960.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010512047.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087174.1
COORDINATES: similar to AA sequence:RefSeq:WP_010512335.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516759.1
COORDINATES: similar to AA sequence:RefSeq:WP_011647315.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803580.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611877.1
programmed frameshift; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011789491.1
COORDINATES: protein motif:HMM:NF025708.2
COORDINATES: similar to AA sequence:RefSeq:WP_010518344.1
COORDINATES: similar to AA sequence:RefSeq:WP_010518345.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007668740.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019092423.1
HipA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019087483.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015074312.1
COORDINATES: similar to AA sequence:RefSeq:WP_019088886.1
COORDINATES: similar to AA sequence:RefSeq:WP_007700357.1
COORDINATES: protein motif:HMM:NF017931.2
COORDINATES: protein motif:HMM:NF017916.2
COORDINATES: similar to AA sequence:RefSeq:WP_015074391.1
COORDINATES: similar to AA sequence:RefSeq:WP_008852552.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012222442.1
GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015074388.1
COORDINATES: similar to AA sequence:RefSeq:WP_015074387.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008852557.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611445.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092482.1
COORDINATES: similar to AA sequence:RefSeq:WP_003619980.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087067.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019092323.1
GO:0015333 - peptide:proton symporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF021134.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010512325.1
COORDINATES: similar to AA sequence:RefSeq:WP_013934313.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007396442.1
COORDINATES: similar to AA sequence:RefSeq:WP_007397134.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091517.1
COORDINATES: similar to AA sequence:RefSeq:WP_010502909.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006115608.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_019092574.1
COORDINATES: similar to AA sequence:RefSeq:WP_007397136.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009762344.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010512407.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087542.1
COORDINATES: similar to AA sequence:RefSeq:WP_010517095.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092484.1
COORDINATES: similar to AA sequence:RefSeq:WP_010512657.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019092486.1
COORDINATES: similar to AA sequence:RefSeq:WP_010505208.1
COORDINATES: similar to AA sequence:RefSeq:WP_010505209.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087453.1
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_019092586.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_019087450.1
COORDINATES: similar to AA sequence:RefSeq:WP_010518059.1
COORDINATES: similar to AA sequence:RefSeq:WP_010518056.1
COORDINATES: similar to AA sequence:RefSeq:WP_010518053.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092698.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_006560453.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_006560454.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511273.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092612.1
COORDINATES: similar to AA sequence:RefSeq:WP_011510130.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092610.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087297.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092640.1
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019092365.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087655.1
COORDINATES: similar to AA sequence:RefSeq:WP_010518357.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396313.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092368.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092369.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511356.1
COORDINATES: similar to AA sequence:RefSeq:WP_010665981.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092373.1
Ti-type conjugative transfer relaxase TraA
COORDINATES: similar to AA sequence:RefSeq:WP_010517487.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_007396295.1
toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_019087318.1
COORDINATES: similar to AA sequence:RefSeq:WP_012813391.1
COORDINATES: similar to AA sequence:RefSeq:WP_010512615.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092622.1
COORDINATES: similar to AA sequence:RefSeq:WP_010512507.1
COORDINATES: similar to AA sequence:RefSeq:WP_012567551.1
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396602.1
COORDINATES: similar to AA sequence:RefSeq:WP_020817917.1
COORDINATES: similar to AA sequence:RefSeq:WP_003630649.1
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: similar to AA sequence:RefSeq:WP_012553060.1
COORDINATES: protein motif:HMM:NF015431.2
substrate binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019086433.1
COORDINATES: similar to AA sequence:RefSeq:WP_019086432.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
IS5-like element IS1031A family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_010516117.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611638.1
COORDINATES: similar to AA sequence:RefSeq:WP_006115922.1
GO:0070069 - cytochrome complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010515376.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_010516121.1
COORDINATES: similar to AA sequence:RefSeq:WP_019086427.1
COORDINATES: similar to AA sequence:RefSeq:WP_007399398.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516124.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014104135.1
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010516126.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516127.1
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: similar to AA sequence:RefSeq:WP_019091902.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_019088922.1
GO:0008233 - peptidase activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013761501.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511632.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396469.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019092081.1
COORDINATES: similar to AA sequence:RefSeq:WP_010515346.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013971403.1
bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_007396466.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092084.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014104132.1
COORDINATES: protein motif:HMM:NF016593.2
COORDINATES: similar to AA sequence:RefSeq:WP_007281565.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_007642869.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_010518081.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010336579.1
COORDINATES: similar to AA sequence:RefSeq:WP_019088969.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396495.1
MSMEG_0569 family flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_010512402.1
MSMEG_0570 family nitrogen starvation response protein
COORDINATES: similar to AA sequence:RefSeq:WP_010515872.1
COORDINATES: similar to AA sequence:RefSeq:WP_003630850.1
sll0787 family AIR synthase-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_012813220.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010515868.1
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007398732.1
GO:0000257 - nitrilase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003630856.1
MSMEG_0572 family nitrogen starvation response protein
COORDINATES: similar to AA sequence:RefSeq:WP_014106934.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612078.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003618725.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092272.1
ArsO family NAD(P)H-dependent flavin-containing monooxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_019089636.1
COORDINATES: similar to AA sequence:RefSeq:WP_010516829.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019089617.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_007400252.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007400732.1
2-dehydropantoate 2-reductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003618731.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010515550.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396703.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106844.1
COORDINATES: similar to AA sequence:RefSeq:WP_019086204.1
COORDINATES: similar to AA sequence:RefSeq:WP_010515545.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091437.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511933.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106837.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091440.1
COORDINATES: similar to AA sequence:RefSeq:WP_019086211.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106835.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106834.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106833.1
DotH/IcmK family type IV secretion protein
COORDINATES: similar to AA sequence:RefSeq:WP_019091443.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511978.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091445.1
COORDINATES: similar to AA sequence:RefSeq:WP_003608877.1
COORDINATES: similar to AA sequence:RefSeq:WP_003625670.1
COORDINATES: similar to AA sequence:RefSeq:WP_003625676.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511999.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396677.1
COORDINATES: similar to AA sequence:RefSeq:WP_010515531.1
type II toxin-antitoxin system HipA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012763398.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091453.1
COORDINATES: similar to AA sequence:RefSeq:WP_004211657.1
COORDINATES: similar to AA sequence:RefSeq:WP_010512310.1
COORDINATES: similar to AA sequence:RefSeq:WP_010515529.1
Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems, both lipoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019091456.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014106815.1
COORDINATES: similar to AA sequence:RefSeq:WP_010517045.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511856.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396660.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010511858.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091461.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511860.1
TraM recognition domain-containing protein
COORDINATES: protein motif:HMM:NF018381.2
COORDINATES: similar to AA sequence:RefSeq:WP_010517610.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396651.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106803.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091969.1
COORDINATES: protein motif:HMM:NF040570.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005720092.1
COORDINATES: similar to AA sequence:RefSeq:WP_006560250.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_019091967.1
VapC toxin family PIN domain ribonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_017412789.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017844503.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511946.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106792.1
COORDINATES: similar to AA sequence:RefSeq:WP_019091963.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396596.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087279.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511736.1
COORDINATES: similar to AA sequence:RefSeq:WP_019087277.1
COORDINATES: protein motif:HMM:NF024754.2