Anolis carolinensis linkage group g, AnoCar2.0, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis.
REFSEQ INFORMATION: The reference sequence is identical to\nCM000948.1.\nAssembly Name: AnoCar2.0\nThe genomic sequence for this RefSeq record is from the whole\ngenome assembly released by the Broad Institute as AnoCar2.0 in\nDecember 2009 (see http://www.broadinstitute.org/models/anole). The\noriginal whole genome shotgun project has the accession\nAAWZ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Arachne v. 3.0.0\nAssembly Name :: AnoCar2.0\nGenome Coverage :: 7.10x\nSequencing Technology :: ABI\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Anolis carolinensis Annotation\n Release 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence, mRNA (same species):INSD:GAFM01050406.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 57 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 57 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
retinoic acid receptor RXR-alpha, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
retinoic acid receptor RXR-alpha, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
retinoic acid receptor RXR-alpha isoform X1
retinoic acid receptor RXR-alpha isoform X2