Anolis carolinensis linkage group c, AnoCar2.0, whole genome shotgun sequence.
type: Entry
definition: Anolis carolinensis linkage group c, AnoCar2.0, whole genome shotgun sequence.
sequence version: NC_014784.1
sequence date: 2016-05-31
sequence: sequence
division: CON
label: NC_014784.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA60547
dblink: SAMN02981230
keyword: WGS
keyword: RefSeq
source: Anolis carolinensis (green anole)
organism: Anolis carolinensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000945.1.\nAssembly Name: AnoCar2.0\nThe genomic sequence for this RefSeq record is from the whole\ngenome assembly released by the Broad Institute as AnoCar2.0 in\nDecember 2009 (see http://www.broadinstitute.org/models/anole). The\noriginal whole genome shotgun project has the accession\nAAWZ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Arachne v. 3.0.0\nAssembly Name :: AnoCar2.0\nGenome Coverage :: 7.10x\nSequencing Technology :: ABI\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Anolis carolinensis Annotation\n Release 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 9478905
topology: linear
so has quality: SO_0000987
location: 1..9478905
location: region:1-9478905:1
RO_0002162: 28377

NC_014784
type: RefSeq
SIO_000068: refseq

PRJNA60547
type: BioProject
SIO_000068: bioproject

SAMN02981230
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9478905:1
position: 9478905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-9478905:1:source
so part of: sequence
organism: Anolis carolinensis
mol type: genomic DNA
country: USA
linkage group: c

28377
type: Taxonomy
SIO_000068: taxonomy

LOC107983035
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC107983035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(278425..291903)
location: region:278425-291903:-1
so has part: feature:278425-291903:-1:exon
subclass of: SO_0000011

107983035
type: Gene
SIO_000068: ncbigene

position:278425:-1
position: 278425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291903:-1
position: 291903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278425-291903:-1:exon

LOC107983035
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 28377
nc RNA class: lncRNA
gene: LOC107983035
product: uncharacterized LOC107983035
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001730484.1
SIO_010081: LOC107983035
subclass of: SO_0000673
so part of: LOC107983035
location: complement(join(278425..278675,288858..289118,291251..291903))
location: region:278425-291903:-1
so has part: feature:291251-291903:-1:exon
so has part: feature:288858-289118:-1:exon
so has part: feature:278425-278675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291251-291903:-1:exon

position:291251:-1
position: 291251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288858-289118:-1:exon

position:288858:-1
position: 288858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289118:-1
position: 289118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278425-278675:-1:exon

position:278675:-1
position: 278675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chd9
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 359600..427143
location: region:359600-427143:1
so has part: feature:359600-427143:1:exon
subclass of: SO_0000010

100554889
type: Gene
SIO_000068: ncbigene

position:359600:1
position: 359600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427143:1
position: 427143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359600-427143:1:exon

chd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: chd9
product: chromodomain helicase DNA binding protein 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016994751.1
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(359600..360856,363118..363220,365524..365616,368633..370216,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..427143)
location: region:359600-427143:1
so has part: feature:359600-360856:1:exon
so has part: feature:363118-363220:1:exon
so has part: feature:365524-365616:1:exon
so has part: feature:368633-370216:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-427143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359600-360856:1:exon

position:360856:1
position: 360856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:363118-363220:1:exon

position:363118:1
position: 363118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363220:1
position: 363220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365524-365616:1:exon

position:365524:1
position: 365524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365616:1
position: 365616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:368633-370216:1:exon

position:368633:1
position: 368633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370216:1
position: 370216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:382162-382499:1:exon

position:382162:1
position: 382162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382499:1
position: 382499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:388827-388938:1:exon

position:388827:1
position: 388827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388938:1
position: 388938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:389073-389219:1:exon

position:389073:1
position: 389073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389219:1
position: 389219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:391321-391389:1:exon

position:391321:1
position: 391321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391389:1
position: 391389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:391468-391523:1:exon

position:391468:1
position: 391468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391523:1
position: 391523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:392611-392728:1:exon

position:392611:1
position: 392611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392728:1
position: 392728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:393074-393160:1:exon

position:393074:1
position: 393074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393160:1
position: 393160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:393662-393799:1:exon

position:393662:1
position: 393662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393799:1
position: 393799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:394130-394251:1:exon

position:394130:1
position: 394130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394251:1
position: 394251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:394404-394647:1:exon

position:394404:1
position: 394404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394647:1
position: 394647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:395076-395252:1:exon

position:395076:1
position: 395076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395252:1
position: 395252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:395744-395887:1:exon

position:395744:1
position: 395744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395887:1
position: 395887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:397321-397576:1:exon

position:397321:1
position: 397321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397576:1
position: 397576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:398110-398320:1:exon

position:398110:1
position: 398110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398320:1
position: 398320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:399909-400104:1:exon

position:399909:1
position: 399909
reference: sequence
type: ForwardStrandPosition
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position:400104:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:401450-401617:1:exon

position:401450:1
position: 401450
reference: sequence
type: ForwardStrandPosition
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position:401617:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:403363-403542:1:exon

position:403363:1
position: 403363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403542:1
position: 403542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:403707-403817:1:exon

position:403707:1
position: 403707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403817:1
position: 403817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:404063-404259:1:exon

position:404063:1
position: 404063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404259:1
position: 404259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:405190-405389:1:exon

position:405190:1
position: 405190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405389:1
position: 405389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:406054-406213:1:exon

position:406054:1
position: 406054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406213:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:408286-408375:1:exon

position:408286:1
position: 408286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408375:1
position: 408375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:408615-408718:1:exon

position:408615:1
position: 408615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408718:1
position: 408718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:408797-408914:1:exon

position:408797:1
position: 408797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408914:1
position: 408914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:409733-409790:1:exon

position:409733:1
position: 409733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409790:1
position: 409790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:410135-410177:1:exon

position:410135:1
position: 410135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410177:1
position: 410177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:410285-410504:1:exon

position:410285:1
position: 410285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410504:1
position: 410504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:410628-410830:1:exon

position:410628:1
position: 410628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410830:1
position: 410830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:411217-412128:1:exon

position:411217:1
position: 411217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412128:1
position: 412128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:413415-413578:1:exon

position:413415:1
position: 413415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413578:1
position: 413578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:414402-414686:1:exon

position:414402:1
position: 414402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414686:1
position: 414686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:415524-415692:1:exon

position:415524:1
position: 415524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415692:1
position: 415692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:416839-416978:1:exon

position:416839:1
position: 416839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416978:1
position: 416978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:417183-417404:1:exon

position:417183:1
position: 417183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417404:1
position: 417404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:422285-422413:1:exon

position:422285:1
position: 422285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422413:1
position: 422413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:422795-422899:1:exon

position:422795:1
position: 422795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422899:1
position: 422899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:423738-427143:1:exon

position:423738:1
position: 423738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

chd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: chd9
product: chromodomain helicase DNA binding protein 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_008113880.2
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(362900..363220,365524..365616,368633..370216,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..427143)
location: region:362900-427143:1
so has part: feature:362900-363220:1:exon
so has part: feature:365524-365616:1:exon
so has part: feature:368633-370216:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
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chd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: chd9
product: chromodomain helicase DNA binding protein 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_003222910.3
SIO_010081: chd9
subclass of: SO_0000673
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chd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: chd9
product: chromodomain helicase DNA binding protein 9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_008113881.2
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
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chd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: chd9
product: chromodomain helicase DNA binding protein 9, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_008113882.2
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
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location: region:362901-427143:1
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position:362901:1
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urn:…
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position:414638:1
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type: ForwardStrandPosition
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urn:…
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chd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: chd9
product: chromodomain helicase DNA binding protein 9, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_003222911.3
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(362901..363220,365524..365616,368633..370216,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413418..413578,414402..414638,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..427143)
location: region:362901-427143:1
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urn:…
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SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:423738-427143:1:exon

chd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: chd9
product: chromodomain helicase DNA binding protein 9, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016994752.1
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(362902..363220,365524..365616,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..427143)
location: region:362902-427143:1
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position:362902:1
position: 362902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 39
SIO_000628: feature:423738-427143:1:exon

chd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X1
translation: MLKSANGCHHGLVKCLITANDLLLYAGKRQLVVSKLCKYIKMTDPMMDFFDDANLFSDTLEGLSEDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHVQETQTQQKMNEFEQLNQYDSLKLQVNQSFSSPTENVLSPHSEFNCSPIHSQTQTNGLFPDVADGSPMWGHQTSSNTSNQNGSPFHQGHSQSMQQNKSFVAHHDFALYQASEQHHPCASLQSQQNRNGISTGDGTRNQPENFMEMNASVPHRTSVPHPPQAARLSNSQQSISVQPFSQTVNDSPHFCGNQEGNFDGHSPTITPCSVVNTQFSAPFSYSGNHISPTSLLQSSTALSAGQQTHPLTDFSENDTFAHQRRTKQRNTESMLNSTASLNSNNYQVLQSAHSQGNFSSSKLSVANINFPPPSGSGSQLSHFSDPIESNGFSSIDENLLQQVESQAESFTELDPEALLQEDLLPQFDESTFVQDNSSNEREHPLEHRVVPNTAQPSHFARSQSQNCSQPWCPPSSNQRLQERKRANAQGQPPSTKKTDGSGTYTKLQNTQVKSMSEKKQKKKAESESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGREEKKGRKGKSKPKDKESKKPKTSSSSKTKERGKIGKLIITLGKKQKRKNESSDEMSDAKQPPQQSFKDETSQKRRSNRQVKRKKYAEEGEGKQSEEEAKASVKIKKSSALLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGGVAVEVEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIEVDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAKRPDSRRLERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIRGTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECHKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDASSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQPAFPVQACVIQTPYEEAALNPKMVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWEC…
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(368660..370216,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..424592)
location: region:368660-424592:1
so has part: feature:368660-370216:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-424592:1:exon

XP_016850240.1
type: Protein
SIO_000068: ncbiprotein

position:368660:1
position: 368660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424592:1
position: 424592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368660-370216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382162-382499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:413415-413578:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:414402-414686:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:423738-424592:1:exon

chd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X1
translation: MLKSANGCHHGLVKCLITANDLLLYAGKRQLVVSKLCKYIKMTDPMMDFFDDANLFSDTLEGLSEDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHVQETQTQQKMNEFEQLNQYDSLKLQVNQSFSSPTENVLSPHSEFNCSPIHSQTQTNGLFPDVADGSPMWGHQTSSNTSNQNGSPFHQGHSQSMQQNKSFVAHHDFALYQASEQHHPCASLQSQQNRNGISTGDGTRNQPENFMEMNASVPHRTSVPHPPQAARLSNSQQSISVQPFSQTVNDSPHFCGNQEGNFDGHSPTITPCSVVNTQFSAPFSYSGNHISPTSLLQSSTALSAGQQTHPLTDFSENDTFAHQRRTKQRNTESMLNSTASLNSNNYQVLQSAHSQGNFSSSKLSVANINFPPPSGSGSQLSHFSDPIESNGFSSIDENLLQQVESQAESFTELDPEALLQEDLLPQFDESTFVQDNSSNEREHPLEHRVVPNTAQPSHFARSQSQNCSQPWCPPSSNQRLQERKRANAQGQPPSTKKTDGSGTYTKLQNTQVKSMSEKKQKKKAESESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGREEKKGRKGKSKPKDKESKKPKTSSSSKTKERGKIGKLIITLGKKQKRKNESSDEMSDAKQPPQQSFKDETSQKRRSNRQVKRKKYAEEGEGKQSEEEAKASVKIKKSSALLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGGVAVEVEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIEVDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAKRPDSRRLERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIRGTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECHKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDASSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQPAFPVQACVIQTPYEEAALNPKMVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWEC…
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(368660..370216,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..424592)
location: region:368660-424592:1
so has part: feature:368660-370216:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-424592:1:exon

XP_008112087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368660-370216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382162-382499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:413415-413578:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:414402-414686:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:423738-424592:1:exon

chd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X4
translation: MLKSANGCHHGLVKCLITANDLLLYAGKRQLVVSKLCKYIKMTDPMMDFFDDANLFSDTLEGLSEDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHVQETQTQQKMNEFEQLNQYDSLKLQVNQSFSSPTENVLSPHSEFNCSPIHSQTQTNGLFPDVADGSPMWGHQTSSNTSNQNGSPFHQGHSQSMQQNKSFVAHHDFALYQASEQHHPCASLQSQQNRNGISTGDGTRNQPENFMEMNASVPHRTSVPHPPQAARLSNSQQSISVQPFSQTVNDSPHFCGNQEGNFDGHSPTITPCSVVNTQFSAPFSYSGNHISPTSLLQSSTALSAGQQTHPLTDFSENDTFAHQRRTKQRNTESMLNSTASLNSNNYQVLQSAHSQGNFSSSKLSVANINFPPPSGSGSQLSHFSDPIESNGFSSIDENLLQQVESQAESFTELDPEALLQEDLLPQFDESTFVQDNSSNEREHPLEHRVVPNTAQPSHFARSQSQNCSQPWCPPSSNQRLQERKRANAQGQPPSTKKTDGSGTYTKLQNTQVKSMSEKKQKKKAESESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGREEKKGRKGKSKPKDKESKKPKTSSSSKTKERGKIGKLIITLGKKQKRKNESSDEMSDAKQPPQQSFKDETSQKRRSNRQVKRKKYAEEGEGKQSEEEAKASVKIKKSSALLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGGVAVEVEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIEVDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAKRPDSRRLERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIRGTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECHKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDASSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQPAFPVQACVIQTPYEEAALNPKMVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWEC…
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(368660..370216,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414638,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..424592)
location: region:368660-424592:1
so has part: feature:368660-370216:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414638:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-424592:1:exon

XP_008112089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368660-370216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382162-382499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:413415-413578:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:414402-414638:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:423738-424592:1:exon

chd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X2
translation: MLKSANGCHHGLVKCLITANDLLLYAGKRQLVVSKLCKYIKMTDPMMDFFDDANLFSDTLEGLSEDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHVQETQTQQKMNEFEQLNQYDSLKLQVNQSFSSPTENVLSPHSEFNCSPIHSQTQTNGLFPDVADGSPMWGHQTSSNTSNQNGSPFHQGHSQSMQQNKSFVAHHDFALYQASEQHHPCASLQSQQNRNGISTGDGTRNQPENFMEMNASVPHRTSVPHPPQAARLSNSQQSISVQPFSQTVNDSPHFCGNQEGNFDGHSPTITPCSVVNTQFSAPFSYSGNHISPTSLLQSSTALSAGQQTHPLTDFSENDTFAHQRRTKQRNTESMLNSTASLNSNNYQVLQSAHSQGNFSSSKLSVANINFPPPSGSGSQLSHFSDPIESNGFSSIDENLLQQVESQAESFTELDPEALLQEDLLPQFDESTFVQDNSSNEREHPLEHRVVPNTAQPSHFARSQSQNCSQPWCPPSSNQRLQERKRANAQGQPPSTKKTDGSGTYTKLQNTQVKSMSEKKQKKKAESESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGREEKKGRKGKSKPKDKESKKPKTSSSSKTKERGKIGKLIITLGKKQKRKNESSDEMSDAKQPPQQSFKDETSQKRRSNRQVKRKKYAEEGEGKQSEEEAKASVKIKKSSALLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGGVAVEVEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIEVDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAKRPDSRRLERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIRGTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECHKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDASSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQPAFPVQACVIQTPYEEAALNPKMVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWEC…
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(368660..370216,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413418..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..424592)
location: region:368660-424592:1
so has part: feature:368660-370216:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413418-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-424592:1:exon

XP_003222958.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368660-370216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382162-382499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:413418-413578:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:414402-414686:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:423738-424592:1:exon

chd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X5
translation: MLKSANGCHHGLVKCLITANDLLLYAGKRQLVVSKLCKYIKMTDPMMDFFDDANLFSDTLEGLSEDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHVQETQTQQKMNEFEQLNQYDSLKLQVNQSFSSPTENVLSPHSEFNCSPIHSQTQTNGLFPDVADGSPMWGHQTSSNTSNQNGSPFHQGHSQSMQQNKSFVAHHDFALYQASEQHHPCASLQSQQNRNGISTGDGTRNQPENFMEMNASVPHRTSVPHPPQAARLSNSQQSISVQPFSQTVNDSPHFCGNQEGNFDGHSPTITPCSVVNTQFSAPFSYSGNHISPTSLLQSSTALSAGQQTHPLTDFSENDTFAHQRRTKQRNTESMLNSTASLNSNNYQVLQSAHSQGNFSSSKLSVANINFPPPSGSGSQLSHFSDPIESNGFSSIDENLLQQVESQAESFTELDPEALLQEDLLPQFDESTFVQDNSSNEREHPLEHRVVPNTAQPSHFARSQSQNCSQPWCPPSSNQRLQERKRANAQGQPPSTKKTDGSGTYTKLQNTQVKSMSEKKQKKKAESESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGREEKKGRKGKSKPKDKESKKPKTSSSSKTKERGKIGKLIITLGKKQKRKNESSDEMSDAKQPPQQSFKDETSQKRRSNRQVKRKKYAEEGEGKQSEEEAKASVKIKKSSALLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGGVAVEVEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIEVDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAKRPDSRRLERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIRGTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECHKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDASSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQPAFPVQACVIQTPYEEAALNPKMVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWEC…
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(368660..370216,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413418..413578,414402..414638,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..424592)
location: region:368660-424592:1
so has part: feature:368660-370216:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413418-413578:1:exon
so has part: feature:414402-414638:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-424592:1:exon

XP_003222959.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368660-370216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382162-382499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:413418-413578:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:414402-414638:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:423738-424592:1:exon

chd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X3
translation: MLKSANGCHHGLVKCLITANDLLLYAGKRQLVVSKLCKYIKMTDPMMDFFDDANLFSDTLEGLSEDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHVQETQTQQKMNEFEQLNQYDSLKLQVNQSFSSPTENVLSPHSEFNCSPIHSQTQTNGLFPDVADGSPMWGHQTSSNTSNQNGSPFHQGHSQSMQQNKSFVAHHDFALYQASEQHHPCASLQSQQNRNGISTGDGTRNQPENFMEMNASVPHRTSVPHPPQAARLSNSQQSISVQPFSQTVNDSPHFCGNQEGNFDGHSPTITPCSVVNTQFSAPFSYSGNHISPTSLLQSSTALSAGQQTHPLTDFSENDTFAHQRRTKQRNTESMLNSTASLNSNNYQVLQSAHSQGNFSSSKLSVANINFPPPSGSGSQLSHFSDPIESNGFSSIDENLLQQVESQAESFTELDPEALLQEDLLPQFDESTFVQDNSSNEREHPLEHRVVPNTAQPSHFARSQSQNCSQPWCPPSSNQRLQERKRANAQGQPPSTKKTDGSGTYTKLQNTQVKSMSEKKQKKKAESESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGREEKKGRKGKSKPKDKESKKPKTSSSSKTKERGKIGKLIITLGKKQKRKNESSDEMSDAKQPPQQSFKDETSQKRRSNRQVKRKKYAEEGEGKQSEEEAKASVKIKKSSALLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGGVAVEVEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIEVDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAKRPDSRRLERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIRGTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECHKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDASSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQPAFPVQACVIQTPYEEAALNPKMVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWECGTH…
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(368660..370216,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401608,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..424592)
location: region:368660-424592:1
so has part: feature:368660-370216:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401608:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-424592:1:exon

XP_008112088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368660-370216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382162-382499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401450-401608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:413415-413578:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:414402-414686:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:423738-424592:1:exon

chd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: chd9
product: chromodomain helicase DNA binding protein 9, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_008113883.2
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(379172..379826,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..427143)
location: region:379172-427143:1
so has part: feature:379172-379826:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-427143:1:exon

position:379172:1
position: 379172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379172-379826:1:exon

position:379826:1
position: 379826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382162-382499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:413415-413578:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:414402-414686:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:423738-427143:1:exon

chd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X6
translation: MPKMSSVKRPRGRPPSTKKTDGSGTYTKLQNTQVKSMSEKKQKKKAESESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGREEKKGRKGKSKPKDKESKKPKTSSSSKTKERGKIGKLIITLGKKQKRKNESSDEMSDAKQPPQQSFKDETSQKRRSNRQVKRKKYAEEGEGKQSEEEAKASVKIKKSSALLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGGVAVEVEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIEVDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAKRPDSRRLERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIRGTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECHKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDASSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQPAFPVQACVIQTPYEEAALNPKMVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWECGTHDWDLLVGAAKHGVSRTDYHILRDPELSFMSAQRNYSQNKVALSRAPTPLLHQYQMALSASPLTPQARLLDVKGSTPEDTKAKLENHKEEIHSSGEESMSIDDIRTGVKTEPLSPKNSTTAHATDHKSAMKADNDRRMVAARTEPLTPNATSKKQRPSKRGSESSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRSGCSSSSSSSCSSASSSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRPEGAPHLKAFDEESVASLSTVQDETQDSFQMNNGTPNSNCILHGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSTRRGYEGATIASFYTTKLLDSPAAAAGASVDCSEPSVPTPPNADGKEESDQSSQLSKVKTHVREKEFTVKINDEGGLKLIFQKQALSQKRPFESEDGTLGQQQYLARLHELQSASETSLVNFPKSLPESGTSSQVTANENGVISDDQPVLKKRRGRRKNVEGVDILFINQNKAPNHVCHGINAP…
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(379788..379826,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..424592)
location: region:379788-424592:1
so has part: feature:379788-379826:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-424592:1:exon

XP_008112090.1
type: Protein
SIO_000068: ncbiprotein

position:379788:1
position: 379788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379788-379826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382162-382499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:413415-413578:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:414402-414686:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:423738-424592:1:exon

chd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: chd9
product: chromodomain helicase DNA binding protein 9, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_008113884.2
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(379854..380184,382162..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..427143)
location: region:379854-427143:1
so has part: feature:379854-380184:1:exon
so has part: feature:382162-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-427143:1:exon

position:379854:1
position: 379854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379854-380184:1:exon

position:380184:1
position: 380184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382162-382499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:413415-413578:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:414402-414686:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:423738-427143:1:exon

chd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X7
translation: MSEKKQKKKAESESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGREEKKGRKGKSKPKDKESKKPKTSSSSKTKERGKIGKLIITLGKKQKRKNESSDEMSDAKQPPQQSFKDETSQKRRSNRQVKRKKYAEEGEGKQSEEEAKASVKIKKSSALLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGGVAVEVEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIEVDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAKRPDSRRLERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIRGTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECHKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDASSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQPAFPVQACVIQTPYEEAALNPKMVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWECGTHDWDLLVGAAKHGVSRTDYHILRDPELSFMSAQRNYSQNKVALSRAPTPLLHQYQMALSASPLTPQARLLDVKGSTPEDTKAKLENHKEEIHSSGEESMSIDDIRTGVKTEPLSPKNSTTAHATDHKSAMKADNDRRMVAARTEPLTPNATSKKQRPSKRGSESSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRSGCSSSSSSSCSSASSSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRPEGAPHLKAFDEESVASLSTVQDETQDSFQMNNGTPNSNCILHGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSTRRGYEGATIASFYTTKLLDSPAAAAGASVDCSEPSVPTPPNADGKEESDQSSQLSKVKTHVREKEFTVKINDEGGLKLIFQKQALSQKRPFESEDGTLGQQQYLARLHELQSASETSLVNFPKSLPESGTSSQVTANENGVISDDQPVLKKRRGRRKNVEGVDILFINQNKAPNHVCHGINAPQIAPGITPILPFIQSQGLCDAESPVPVINLKDGTRL…
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(382231..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..424592)
location: region:382231-424592:1
so has part: feature:382231-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-424592:1:exon

XP_016850241.1
type: Protein
SIO_000068: ncbiprotein

position:382231:1
position: 382231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382231-382499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:413415-413578:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:414402-414686:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:423738-424592:1:exon

chd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: chd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X7
translation: MSEKKQKKKAESESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGREEKKGRKGKSKPKDKESKKPKTSSSSKTKERGKIGKLIITLGKKQKRKNESSDEMSDAKQPPQQSFKDETSQKRRSNRQVKRKKYAEEGEGKQSEEEAKASVKIKKSSALLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGGVAVEVEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIEVDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAKRPDSRRLERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIRGTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECHKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDASSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQPAFPVQACVIQTPYEEAALNPKMVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWECGTHDWDLLVGAAKHGVSRTDYHILRDPELSFMSAQRNYSQNKVALSRAPTPLLHQYQMALSASPLTPQARLLDVKGSTPEDTKAKLENHKEEIHSSGEESMSIDDIRTGVKTEPLSPKNSTTAHATDHKSAMKADNDRRMVAARTEPLTPNATSKKQRPSKRGSESSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRSGCSSSSSSSCSSASSSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRPEGAPHLKAFDEESVASLSTVQDETQDSFQMNNGTPNSNCILHGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSTRRGYEGATIASFYTTKLLDSPAAAAGASVDCSEPSVPTPPNADGKEESDQSSQLSKVKTHVREKEFTVKINDEGGLKLIFQKQALSQKRPFESEDGTLGQQQYLARLHELQSASETSLVNFPKSLPESGTSSQVTANENGVISDDQPVLKKRRGRRKNVEGVDILFINQNKAPNHVCHGINAPQIAPGITPILPFIQSQGLCDAESPVPVINLKDGTRL…
SIO_010081: chd9
subclass of: SO_0000673
so part of: chd9
location: join(382231..382499,388827..388938,389073..389219,391321..391389,391468..391523,392611..392728,393074..393160,393662..393799,394130..394251,394404..394647,395076..395252,395744..395887,397321..397576,398110..398320,399909..400104,401450..401617,403363..403542,403707..403817,404063..404259,405190..405389,406054..406213,408286..408375,408615..408718,408797..408914,409733..409790,410135..410177,410285..410504,410628..410830,411217..412128,413415..413578,414402..414686,415524..415692,416839..416978,417183..417404,422285..422413,422795..422899,423738..424592)
location: region:382231-424592:1
so has part: feature:382231-382499:1:exon
so has part: feature:388827-388938:1:exon
so has part: feature:389073-389219:1:exon
so has part: feature:391321-391389:1:exon
so has part: feature:391468-391523:1:exon
so has part: feature:392611-392728:1:exon
so has part: feature:393074-393160:1:exon
so has part: feature:393662-393799:1:exon
so has part: feature:394130-394251:1:exon
so has part: feature:394404-394647:1:exon
so has part: feature:395076-395252:1:exon
so has part: feature:395744-395887:1:exon
so has part: feature:397321-397576:1:exon
so has part: feature:398110-398320:1:exon
so has part: feature:399909-400104:1:exon
so has part: feature:401450-401617:1:exon
so has part: feature:403363-403542:1:exon
so has part: feature:403707-403817:1:exon
so has part: feature:404063-404259:1:exon
so has part: feature:405190-405389:1:exon
so has part: feature:406054-406213:1:exon
so has part: feature:408286-408375:1:exon
so has part: feature:408615-408718:1:exon
so has part: feature:408797-408914:1:exon
so has part: feature:409733-409790:1:exon
so has part: feature:410135-410177:1:exon
so has part: feature:410285-410504:1:exon
so has part: feature:410628-410830:1:exon
so has part: feature:411217-412128:1:exon
so has part: feature:413415-413578:1:exon
so has part: feature:414402-414686:1:exon
so has part: feature:415524-415692:1:exon
so has part: feature:416839-416978:1:exon
so has part: feature:417183-417404:1:exon
so has part: feature:422285-422413:1:exon
so has part: feature:422795-422899:1:exon
so has part: feature:423738-424592:1:exon

XP_008112091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382231-382499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388827-388938:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389073-389219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391321-391389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391468-391523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:392611-392728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393074-393160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393662-393799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:394130-394251:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394404-394647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395076-395252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395744-395887:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397321-397576:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:398110-398320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:399909-400104:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401450-401617:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:403363-403542:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:403707-403817:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:404063-404259:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:405190-405389:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:406054-406213:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408286-408375:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408615-408718:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408797-408914:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:409733-409790:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:410135-410177:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410285-410504:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410628-410830:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:411217-412128:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:413415-413578:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:414402-414686:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:415524-415692:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:416839-416978:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:417183-417404:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:422285-422413:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:422795-422899:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:423738-424592:1:exon

rbl2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: rbl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 430272..455086
location: region:430272-455086:1
so has part: feature:430272-455086:1:exon
subclass of: SO_0000010

100556593
type: Gene
SIO_000068: ncbigene

position:430272:1
position: 430272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455086:1
position: 455086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430272-455086:1:exon

rbl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: rbl2
product: RB transcriptional corepressor like 2
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01028413.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 91 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016994753.1
SIO_010081: rbl2
subclass of: SO_0000673
so part of: rbl2
location: join(430272..430681,432743..432873,434472..434672,435690..435754,439354..439482,439893..440053,440140..440204,441260..441446,442024..442190,442557..442666,442972..443075,443332..443469,443580..443744,444289..444400,445864..446139,447449..447717,449347..449523,449633..449704,449946..450048,450470..450681,452143..452307,453804..453886,<454130..455086)
location: region:430272-455086:1
so has part: feature:430272-430681:1:exon
so has part: feature:432743-432873:1:exon
so has part: feature:434472-434672:1:exon
so has part: feature:435690-435754:1:exon
so has part: feature:439354-439482:1:exon
so has part: feature:439893-440053:1:exon
so has part: feature:440140-440204:1:exon
so has part: feature:441260-441446:1:exon
so has part: feature:442024-442190:1:exon
so has part: feature:442557-442666:1:exon
so has part: feature:442972-443075:1:exon
so has part: feature:443332-443469:1:exon
so has part: feature:443580-443744:1:exon
so has part: feature:444289-444400:1:exon
so has part: feature:445864-446139:1:exon
so has part: feature:447449-447717:1:exon
so has part: feature:449347-449523:1:exon
so has part: feature:449633-449704:1:exon
so has part: feature:449946-450048:1:exon
so has part: feature:450470-450681:1:exon
so has part: feature:452143-452307:1:exon
so has part: feature:453804-453886:1:exon
so has part: feature:454130-455086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430272-430681:1:exon

position:430681:1
position: 430681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:432743-432873:1:exon

position:432743:1
position: 432743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432873:1
position: 432873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434472-434672:1:exon

position:434472:1
position: 434472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434672:1
position: 434672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:435690-435754:1:exon

position:435690:1
position: 435690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435754:1
position: 435754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:439354-439482:1:exon

position:439354:1
position: 439354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439482:1
position: 439482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:439893-440053:1:exon

position:439893:1
position: 439893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440053:1
position: 440053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:440140-440204:1:exon

position:440140:1
position: 440140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440204:1
position: 440204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:441260-441446:1:exon

position:441260:1
position: 441260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441446:1
position: 441446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:442024-442190:1:exon

position:442024:1
position: 442024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442190:1
position: 442190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:442557-442666:1:exon

position:442557:1
position: 442557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442666:1
position: 442666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:442972-443075:1:exon

position:442972:1
position: 442972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443075:1
position: 443075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:443332-443469:1:exon

position:443332:1
position: 443332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443469:1
position: 443469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:443580-443744:1:exon

position:443580:1
position: 443580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443744:1
position: 443744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:444289-444400:1:exon

position:444289:1
position: 444289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444400:1
position: 444400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:445864-446139:1:exon

position:445864:1
position: 445864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446139:1
position: 446139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:447449-447717:1:exon

position:447449:1
position: 447449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447717:1
position: 447717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:449347-449523:1:exon

position:449347:1
position: 449347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449523:1
position: 449523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:449633-449704:1:exon

position:449633:1
position: 449633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449704:1
position: 449704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:449946-450048:1:exon

position:449946:1
position: 449946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450048:1
position: 450048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:450470-450681:1:exon

position:450470:1
position: 450470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450681:1
position: 450681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:452143-452307:1:exon

position:452143:1
position: 452143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452307:1
position: 452307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:453804-453886:1:exon

position:453804:1
position: 453804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453886:1
position: 453886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:454130-455086:1:exon

position:454130:1
position: 454130
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

rbl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: rbl2
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01028413.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 91 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-like protein 2
translation: MRGGRQCASAFPSRRPSVNTMLGGGDDGEGGGGEGAAEAPEEEEKDNEEEEEAEDDGDTRQRYEELCSSLNMDERARAEAWLSFQSMRRNYTLEGNDLHWLACALYVACRKAVPTVSRGTVEGNYVSLIRILRCSGQSLIEFFNKMKKWEDMANLPSQFRERTTRLERNFTVSAVIFKKYEPIFQDIFKYPQDDPPRQQRGRKQRRQPCTVSEVFQFCWVLFVYAKGNFPMISDDLVNSYHLLLCVLDLVYANSLQCPNHKDLLNPSFKGLPEDFQSKDFKLLSEPPCIIEKLCSLHDGLLLEAKGIKEHFWKPYVRRLFEKKILKGKEENLAGFLDPGNFGESLKNINKAYEEYILSVGNLDERIFLGEDADEEIGTLRRCLNTTSGVETAERVQVKHNLQEHFERAKSFRISTPLTGRKYIKEREACVSPISIATYNLTRLHTMLTGLKNAPSENLEQIFRSCSRDPSLSISNRVKEMYEIYCQKTQSQGDPDSFSKDIVGKHFHLAEVLYYKVLESVIEQEKKRLGDVDLSAILEHDVFHRSLMACCLEIIIYSYKAADSFPFITDIFDVPAFHFYKVIEILIRAEDGLCREVVKHLNHIEEQILESLAWKEESPLWEKIRENDNKVPTCEEVIPCQYFERSNGNSMAGSPLTPRRLNEVRAESGALGKSVPSSPTTLYERYGSPTSNPTRRRLFVDNDTPAEGSRTPVRVSQQPVISAMPVQTVSPESIPVTPVPGQTLVTVATATVTANNGQTVTIPVQGIANENGGITFIPVQVNVSGQAQPLPSSIPPLSAQTLAGTLSPQQMTSTSLHLPGQFQQIPVPGEQRQKPQAGSGIKSRKTGSLMLFFRKVFHLASVRLRDLCLKLDISDELRKKIWTCFEFSLVQCSDLMMDRHLDQLLMCAIYIISKVTKEDTSFQNIMRFYRTQPQAKSHVYRSVLIKGRRRRYSGNAESNNQQNSPTEKNKDRTSRDSSPVMMRSSSTLPVPQPSSAPPTPTRLIGAKSEEEEEEERGDLIRFYNNVYTDRIKDFALKYSSSNTGEAPPLSPYPFVRSGSPRRIQLSQNHKIYISPHKNESALSPREKIFYYFSSSPSKRLQEINSMIRTGETSPKKRGIVLEEGADESPAKRMCPENHTALLRRLQDVANDRGSHACKCRQT
SIO_010081: rbl2
subclass of: SO_0000673
so part of: rbl2
location: join(430400..430681,432743..432873,434472..434672,435690..435754,439354..439482,439893..440053,440140..440204,441260..441446,442024..442190,442557..442666,442972..443075,443332..443469,443580..443744,444289..444400,445864..446139,447449..447717,449347..449523,449633..449704,449946..450048,450470..450681,452143..452307,453804..453886,<454130..454150)
location: region:430400-454150:1
so has part: feature:430400-430681:1:exon
so has part: feature:432743-432873:1:exon
so has part: feature:434472-434672:1:exon
so has part: feature:435690-435754:1:exon
so has part: feature:439354-439482:1:exon
so has part: feature:439893-440053:1:exon
so has part: feature:440140-440204:1:exon
so has part: feature:441260-441446:1:exon
so has part: feature:442024-442190:1:exon
so has part: feature:442557-442666:1:exon
so has part: feature:442972-443075:1:exon
so has part: feature:443332-443469:1:exon
so has part: feature:443580-443744:1:exon
so has part: feature:444289-444400:1:exon
so has part: feature:445864-446139:1:exon
so has part: feature:447449-447717:1:exon
so has part: feature:449347-449523:1:exon
so has part: feature:449633-449704:1:exon
so has part: feature:449946-450048:1:exon
so has part: feature:450470-450681:1:exon
so has part: feature:452143-452307:1:exon
so has part: feature:453804-453886:1:exon
so has part: feature:454130-454150:1:exon

XP_016850242.1
type: Protein
SIO_000068: ncbiprotein

position:430400:1
position: 430400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454150:1
position: 454150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430400-430681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432743-432873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434472-434672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435690-435754:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439354-439482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:439893-440053:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440140-440204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441260-441446:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442024-442190:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442557-442666:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:442972-443075:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443332-443469:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:443580-443744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:444289-444400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:445864-446139:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:447449-447717:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:449347-449523:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:449633-449704:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:449946-450048:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:450470-450681:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:452143-452307:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:453804-453886:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:454130-454150:1:exon

aktip
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: aktip
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(456233..474083)
location: region:456233-474083:-1
so has part: feature:456233-474083:-1:exon
subclass of: SO_0000010

100555217
type: Gene
SIO_000068: ncbigene

position:456233:-1
position: 456233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474083:-1
position: 474083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456233-474083:-1:exon

aktip
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: aktip
product: AKT interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_003222912.3
SIO_010081: aktip
subclass of: SO_0000673
so part of: aktip
location: complement(join(456233..457308,458536..458596,458851..458958,459296..459394,459497..459585,461457..461557,461645..461709,464520..464725,465768..465885,473960..474083))
location: region:456233-474083:-1
so has part: feature:473960-474083:-1:exon
so has part: feature:465768-465885:-1:exon
so has part: feature:464520-464725:-1:exon
so has part: feature:461645-461709:-1:exon
so has part: feature:461457-461557:-1:exon
so has part: feature:459497-459585:-1:exon
so has part: feature:459296-459394:-1:exon
so has part: feature:458851-458958:-1:exon
so has part: feature:458536-458596:-1:exon
so has part: feature:456233-457308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473960-474083:-1:exon

position:473960:-1
position: 473960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465768-465885:-1:exon

position:465768:-1
position: 465768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465885:-1
position: 465885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464520-464725:-1:exon

position:464520:-1
position: 464520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464725:-1
position: 464725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:461645-461709:-1:exon

position:461645:-1
position: 461645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461709:-1
position: 461709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:461457-461557:-1:exon

position:461457:-1
position: 461457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461557:-1
position: 461557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459497-459585:-1:exon

position:459497:-1
position: 459497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459585:-1
position: 459585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:459296-459394:-1:exon

position:459296:-1
position: 459296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459394:-1
position: 459394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:458851-458958:-1:exon

position:458851:-1
position: 458851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458958:-1
position: 458958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:458536-458596:-1:exon

position:458536:-1
position: 458536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458596:-1
position: 458596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:456233-457308:-1:exon

position:457308:-1
position: 457308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

aktip
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: aktip
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AKT-interacting protein
translation: MNPFWSMSTSSTRKRPETEEKALVSELKNSPPRTAPKKQLPSIPKNAVPMTKPASPALSAQSTNGTHASYGPFYLEYSLLAEFTLVVKQKLPGVYVQPSYQSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPRLVFDLPIFHPLVDPVSGELDVKRAFAKWRRNHNHIWQILMYARRVFYKIDTTSPLNPEAAVLYEKDIQLFKSKVVDSVRLCSSRLFDPPKIEDPYAISFSPWNPAIHDEAREKMLTQKKKEEDQQSKSMQVSGLSWVKPGSVQPFSKEEKTLPT
SIO_010081: aktip
subclass of: SO_0000673
so part of: aktip
location: complement(join(457198..457308,458536..458596,458851..458958,459296..459394,459497..459585,461457..461557,461645..461709,464520..464725,465768..465809))
location: region:457198-465809:-1
so has part: feature:465768-465809:-1:exon
so has part: feature:464520-464725:-1:exon
so has part: feature:461645-461709:-1:exon
so has part: feature:461457-461557:-1:exon
so has part: feature:459497-459585:-1:exon
so has part: feature:459296-459394:-1:exon
so has part: feature:458851-458958:-1:exon
so has part: feature:458536-458596:-1:exon
so has part: feature:457198-457308:-1:exon

XP_003222960.1
type: Protein
SIO_000068: ncbiprotein

position:457198:-1
position: 457198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465809:-1
position: 465809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465768-465809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464520-464725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461645-461709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461457-461557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459497-459585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459296-459394:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:458851-458958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:458536-458596:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457198-457308:-1:exon

rpgrip1l
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: rpgrip1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(499898..569231)
location: region:499898-569231:-1
so has part: feature:499898-569231:-1:exon
subclass of: SO_0000010

100556787
type: Gene
SIO_000068: ncbigene

position:499898:-1
position: 499898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569231:-1
position: 569231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499898-569231:-1:exon

rpgrip1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: rpgrip1l
product: RPGRIP1 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_008113888.2
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(499898..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535213,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563238..563376,565645..565765,569150..569231))
location: region:499898-569231:-1
so has part: feature:569150-569231:-1:exon
so has part: feature:565645-565765:-1:exon
so has part: feature:563238-563376:-1:exon
so has part: feature:561397-561695:-1:exon
so has part: feature:560549-560657:-1:exon
so has part: feature:558398-558541:-1:exon
so has part: feature:555559-555664:-1:exon
so has part: feature:554107-554253:-1:exon
so has part: feature:553211-553284:-1:exon
so has part: feature:547842-547981:-1:exon
so has part: feature:544382-544488:-1:exon
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
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urn:…
SIO_000300: 13
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SIO_000300: 17
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SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 23
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SIO_000300: 24
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urn:…
SIO_000300: 25
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SIO_000300: 26
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rpgrip1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: rpgrip1l
product: RPGRIP1 like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_008113889.2
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(499898..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535213,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563238..563376,565645..565765,569154..569230))
location: region:499898-569230:-1
so has part: feature:569154-569230:-1:exon
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position:569230:-1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:569154-569230:-1:exon

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position: 569154
reference: sequence
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urn:…
SIO_000300: 2
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SIO_000628: feature:555559-555664:-1:exon

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SIO_000300: 8
SIO_000628: feature:554107-554253:-1:exon

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SIO_000628: feature:553211-553284:-1:exon

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SIO_000628: feature:544382-544488:-1:exon

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SIO_000628: feature:544056-544106:-1:exon

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SIO_000628: feature:542110-542289:-1:exon

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SIO_000628: feature:541577-541694:-1:exon

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SIO_000628: feature:540598-541050:-1:exon

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SIO_000628: feature:533247-533443:-1:exon

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SIO_000628: feature:532351-532434:-1:exon

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SIO_000628: feature:531446-531520:-1:exon

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SIO_000300: 21
SIO_000628: feature:528824-528986:-1:exon

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SIO_000300: 22
SIO_000628: feature:527480-527574:-1:exon

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SIO_000300: 23
SIO_000628: feature:514578-514761:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:505408-505492:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:501630-501763:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:499898-501011:-1:exon

rpgrip1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: rpgrip1l
product: RPGRIP1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_008113890.2
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(499898..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535213,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563170..563227,563296..563376,565645..565765,569110..569152))
location: region:499898-569152:-1
so has part: feature:569110-569152:-1:exon
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position:569152:-1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:569110-569152:-1:exon

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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:565645-565765:-1:exon

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SIO_000300: 3
SIO_000628: feature:563296-563376:-1:exon

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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:563170-563227:-1:exon

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reference: sequence
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position:563227:-1
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reference: sequence
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urn:…
SIO_000300: 5
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SIO_000628: feature:560549-560657:-1:exon

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SIO_000628: feature:532351-532434:-1:exon

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SIO_000300: 21
SIO_000628: feature:531446-531520:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:528824-528986:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:527480-527574:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:514578-514761:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:505408-505492:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:501630-501763:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:499898-501011:-1:exon

rpgrip1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: rpgrip1l
product: RPGRIP1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008113887.2
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(499898..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535210,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563238..563376,565645..565765,569110..569152))
location: region:499898-569152:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:569110-569152:-1:exon

urn:…
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SIO_000628: feature:565645-565765:-1:exon

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urn:…
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SIO_000628: feature:541577-541694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:540598-541050:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535981-536117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:534847-535210:-1:exon

position:535210:-1
position: 535210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:533247-533443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:532351-532434:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:531446-531520:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:528824-528986:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:527480-527574:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:514578-514761:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:505408-505492:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:501630-501763:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:499898-501011:-1:exon

rpgrip1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: rpgrip1l
product: RPGRIP1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008113886.2
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(499898..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535213,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563238..563376,565645..565765,569110..569152))
location: region:499898-569152:-1
so has part: feature:569110-569152:-1:exon
so has part: feature:565645-565765:-1:exon
so has part: feature:563238-563376:-1:exon
so has part: feature:561397-561695:-1:exon
so has part: feature:560549-560657:-1:exon
so has part: feature:558398-558541:-1:exon
so has part: feature:555559-555664:-1:exon
so has part: feature:554107-554253:-1:exon
so has part: feature:553211-553284:-1:exon
so has part: feature:547842-547981:-1:exon
so has part: feature:544382-544488:-1:exon
so has part: feature:544056-544106:-1:exon
so has part: feature:542110-542289:-1:exon
so has part: feature:541577-541694:-1:exon
so has part: feature:540598-541050:-1:exon
so has part: feature:535981-536117:-1:exon
so has part: feature:534847-535213:-1:exon
so has part: feature:533247-533443:-1:exon
so has part: feature:532351-532434:-1:exon
so has part: feature:531446-531520:-1:exon
so has part: feature:528824-528986:-1:exon
so has part: feature:527480-527574:-1:exon
so has part: feature:514578-514761:-1:exon
so has part: feature:505408-505492:-1:exon
so has part: feature:501630-501763:-1:exon
so has part: feature:499898-501011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569110-569152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565645-565765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563238-563376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561397-561695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560549-560657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558398-558541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555559-555664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554107-554253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553211-553284:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547842-547981:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:544382-544488:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:544056-544106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:542110-542289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541577-541694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:540598-541050:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535981-536117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:534847-535213:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:533247-533443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:532351-532434:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:531446-531520:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:528824-528986:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:527480-527574:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:514578-514761:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:505408-505492:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:501630-501763:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:499898-501011:-1:exon

rpgrip1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: rpgrip1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein fantom isoform X2
translation: MGINTKEKDDLYLGMQSSAMSAAADETSEDLPVRDVGLGQGGFQEPAQNAKARQTVSRISREDLEDRYLRLHEENLLLKQHAHKQEDKIKRMATKLIRLVNDKKKAEQAGGGPKRRGQDVEMEEVIEQLQEKVRDLERQNESIRNRLISTKQQLQLQGHRHMPYHYVQARINTGLRKAAESVGIQERAKKGMRLQDIDIQALKSPQALPPKYGQNLLEEAKAEIRNLENVIESLKAHNEELEHSVEVLRSEIQKKESEFEEALLQLKEQQATGQRLTIRDNVTLIKLHKQLAEKSNEFAAMESKMLQLDENQRHLKVSHDALMAKGDELNLLLKEERLKCLNLERQLQANTFSKRRLDELQDRINDLEKERDLLKENYDKLYNSAFGVTHDQKWKLKEQQLKLEIAQLEAALKSDLADKNNILDRMKVEQDQNEKLAQENQELRLQYLEQKQQLDEMKNRMKFFTKESDVDAAELSEALMLIKVRRQQTNGDLTFLEKVEDDTQKDLERSMRELQATHAETVQELEKTRNMLIVQHKINKDYQAEVESVTQKMEALQQDYELKLEQYVQLLDVRAMRIRKLEAQLKDIAYGTKQYKFRPEILPDDPVDEFNETAHLERGENLFEIHISRVIFSAETTKSFGDQEPATFCTYAFYDFELQTTPIIRGLNPTYNFTSQYLVRMDDFFLQYLQKNTATLEIHHAYGMDFETTAACQLRFHEMLEQNGRVYGSAILVGVGREIQNYGTVEYWAKLKVPMDQAIRLYKERAKALGYITMNTKDQQPVLNPAQSSPSTEGNLNELHITTKCCSNLKCQMSGLQPSPYVVYKFFDFPDHDTSIIPSSNQPQFSDHMCFPVSMNVDLDRYLKAESLSLYVFDDNETEDGVYIGKANVPLISLAHDRYISGTFELTDSKGFSAGTISIELKWKFSYLQPPGSIVAADLSHYIQNEKPVKGQGEGPLPTPLFTSTAVRPQPKPRQRTSAVDKKVSFVDLVELSNTSPQNEDKEHEEKTKDEKAIVSDIPQAKPETEAGNGTSKSASKTQLEQEDSSQLSEGQFADQSSASSGDETEITEDLEPEEQDEQCMADAVESVTDSDDCIVSSPVSTSLNPAAEKIRIEIISLSFTDNQITRDNTIQRLFVECKFSTFPAEETPVSLPKPRSGQWVYYNYSHVMHLDQANNKARRDVLKTMLQGTEPSPGSIRFTVVSDPPEDEQDLECEDIGFAYVRLSEIFQNKRDMIEQDIKVFNSPDDGTVIGRLKVTVEALNALRSIHKELRNSPEA
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(500899..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535213,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563170..563227,563296..563376,565645..565765,569110..569121))
location: region:500899-569121:-1
so has part: feature:569110-569121:-1:exon
so has part: feature:565645-565765:-1:exon
so has part: feature:563296-563376:-1:exon
so has part: feature:563170-563227:-1:exon
so has part: feature:561397-561695:-1:exon
so has part: feature:560549-560657:-1:exon
so has part: feature:558398-558541:-1:exon
so has part: feature:555559-555664:-1:exon
so has part: feature:554107-554253:-1:exon
so has part: feature:553211-553284:-1:exon
so has part: feature:547842-547981:-1:exon
so has part: feature:544382-544488:-1:exon
so has part: feature:544056-544106:-1:exon
so has part: feature:542110-542289:-1:exon
so has part: feature:541577-541694:-1:exon
so has part: feature:540598-541050:-1:exon
so has part: feature:535981-536117:-1:exon
so has part: feature:534847-535213:-1:exon
so has part: feature:533247-533443:-1:exon
so has part: feature:532351-532434:-1:exon
so has part: feature:531446-531520:-1:exon
so has part: feature:528824-528986:-1:exon
so has part: feature:527480-527574:-1:exon
so has part: feature:514578-514761:-1:exon
so has part: feature:505408-505492:-1:exon
so has part: feature:501630-501763:-1:exon
so has part: feature:500899-501011:-1:exon

XP_008112097.2
type: Protein
SIO_000068: ncbiprotein

position:500899:-1
position: 500899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569121:-1
position: 569121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569110-569121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565645-565765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563296-563376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563170-563227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561397-561695:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560549-560657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558398-558541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555559-555664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554107-554253:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:553211-553284:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:547842-547981:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:544382-544488:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:544056-544106:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:542110-542289:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:541577-541694:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:540598-541050:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535981-536117:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:534847-535213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:533247-533443:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:532351-532434:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:531446-531520:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:528824-528986:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:527480-527574:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:514578-514761:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:505408-505492:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:501630-501763:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:500899-501011:-1:exon

rpgrip1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: rpgrip1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein fantom isoform X3
translation: MGINTKEKDDLYLGMQSSAMSAAADETSEDLPVRDVGLGQGGFQEPAQNAKARQTVSRISREDLEDRYLRLHEENLLLKQHAHKQEDKIKRMATKLIRLVNDKKKAEQAGGGPKRRGQDVEMEEVIEQLQEKVRDLERQNESIRNRLISTKQQLQLQGHRHMPYHYVQARINTGLRKAAESVGIQERAKKGMRLQDIDIQALKSPQALPPKYGQNLLEEAKAEIRNLENVIESLKAHNEELEHSVEVLRSEIQKKESEFEEALLQLKEQQATGQRLTIRDNVTLIKLHKQLAEKSNEFAAMESKMLQLDENQRHLKVSHDALMAKGDELNLLLKEERLKCLNLERQLQANTFSKRRLDELQDRINDLEKERDLLKENYDKLYNSAFGVTHDQKWKLKEQQLKLEIAQLEAALKSDLADKNNILDRMKVEQDQNEKLAQENQELRLQYLEQKQQLDEMKNRMKFFTKESDVDAAELSEALMLIKVRRQQTNGDLTFLEKVEDDTQKDLERSMRELQATHAETVQELEKTRNMLIVQHKINKDYQAEVESVTQKMEALQQDYELKLEQYVQLLDVRAMRIRKLEAQLKDIAYGTKQYKFRPEILPDDPVDEFNETAHLERGENLFEIHISRVIFSAETTKSFGDQEPATFCTYAFYDFELQTTPIIRGLNPTYNFTSQYLVRMDDFFLQYLQKNTATLEIHHAYGMDFETTAACQLRFHEMLEQNGRVYGSAILVGVGREIQNYGTVEYWAKLKVPMDQAIRLYKERAKALGYITMNTKDQPVLNPAQSSPSTEGNLNELHITTKCCSNLKCQMSGLQPSPYVVYKFFDFPDHDTSIIPSSNQPQFSDHMCFPVSMNVDLDRYLKAESLSLYVFDDNETEDGVYIGKANVPLISLAHDRYISGTFELTDSKGFSAGTISIELKWKFSYLQPPGSIVAADLSHYIQNEKPVKGQGEGPLPTPLFTSTAVRPQPKPRQRTSAVDKKVSFVDLVELSNTSPQNEDKEHEEKTKDEKAIVSDIPQAKPETEAGNGTSKSASKTQLEQEDSSQLSEGQFADQSSASSGDETEITEDLEPEEQDEQCMADAVESVTDSDDCIVSSPVSTSLNPAAEKIRIEIISLSFTDNQITRDNTIQRLFVECKFSTFPAEETPVSLPKPRSGQWVYYNYSHVMHLDQANNKARRDVLKTMLQGTEPSPGSIRFTVVSDPPEDEQDLECEDIGFAYVRLSEIFQNKRDMIEQDIKVFNSPDDGTVIGRLKVTVEALNALRSIHKELRNSPEA
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(500899..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535210,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563238..563376,565645..565765,569110..569121))
location: region:500899-569121:-1
so has part: feature:569110-569121:-1:exon
so has part: feature:565645-565765:-1:exon
so has part: feature:563238-563376:-1:exon
so has part: feature:561397-561695:-1:exon
so has part: feature:560549-560657:-1:exon
so has part: feature:558398-558541:-1:exon
so has part: feature:555559-555664:-1:exon
so has part: feature:554107-554253:-1:exon
so has part: feature:553211-553284:-1:exon
so has part: feature:547842-547981:-1:exon
so has part: feature:544382-544488:-1:exon
so has part: feature:544056-544106:-1:exon
so has part: feature:542110-542289:-1:exon
so has part: feature:541577-541694:-1:exon
so has part: feature:540598-541050:-1:exon
so has part: feature:535981-536117:-1:exon
so has part: feature:534847-535210:-1:exon
so has part: feature:533247-533443:-1:exon
so has part: feature:532351-532434:-1:exon
so has part: feature:531446-531520:-1:exon
so has part: feature:528824-528986:-1:exon
so has part: feature:527480-527574:-1:exon
so has part: feature:514578-514761:-1:exon
so has part: feature:505408-505492:-1:exon
so has part: feature:501630-501763:-1:exon
so has part: feature:500899-501011:-1:exon

XP_008112094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569110-569121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565645-565765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563238-563376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561397-561695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560549-560657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558398-558541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555559-555664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554107-554253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553211-553284:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547842-547981:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:544382-544488:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:544056-544106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:542110-542289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541577-541694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:540598-541050:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535981-536117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:534847-535210:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:533247-533443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:532351-532434:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:531446-531520:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:528824-528986:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:527480-527574:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:514578-514761:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:505408-505492:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:501630-501763:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:500899-501011:-1:exon

rpgrip1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: rpgrip1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein fantom isoform X1
translation: MGINTKEKDDLYLGMQSSAMSAAADETSEDLPVRDVGLGQGGFQEPAQNAKARQTVSRISREDLEDRYLRLHEENLLLKQHAHKQEDKIKRMATKLIRLVNDKKKAEQAGGGPKRRGQDVEMEEVIEQLQEKVRDLERQNESIRNRLISTKQQLQLQGHRHMPYHYVQARINTGLRKAAESVGIQERAKKGMRLQDIDIQALKSPQALPPKYGQNLLEEAKAEIRNLENVIESLKAHNEELEHSVEVLRSEIQKKESEFEEALLQLKEQQATGQRLTIRDNVTLIKLHKQLAEKSNEFAAMESKMLQLDENQRHLKVSHDALMAKGDELNLLLKEERLKCLNLERQLQANTFSKRRLDELQDRINDLEKERDLLKENYDKLYNSAFGVTHDQKWKLKEQQLKLEIAQLEAALKSDLADKNNILDRMKVEQDQNEKLAQENQELRLQYLEQKQQLDEMKNRMKFFTKESDVDAAELSEALMLIKVRRQQTNGDLTFLEKVEDDTQKDLERSMRELQATHAETVQELEKTRNMLIVQHKINKDYQAEVESVTQKMEALQQDYELKLEQYVQLLDVRAMRIRKLEAQLKDIAYGTKQYKFRPEILPDDPVDEFNETAHLERGENLFEIHISRVIFSAETTKSFGDQEPATFCTYAFYDFELQTTPIIRGLNPTYNFTSQYLVRMDDFFLQYLQKNTATLEIHHAYGMDFETTAACQLRFHEMLEQNGRVYGSAILVGVGREIQNYGTVEYWAKLKVPMDQAIRLYKERAKALGYITMNTKDQQPVLNPAQSSPSTEGNLNELHITTKCCSNLKCQMSGLQPSPYVVYKFFDFPDHDTSIIPSSNQPQFSDHMCFPVSMNVDLDRYLKAESLSLYVFDDNETEDGVYIGKANVPLISLAHDRYISGTFELTDSKGFSAGTISIELKWKFSYLQPPGSIVAADLSHYIQNEKPVKGQGEGPLPTPLFTSTAVRPQPKPRQRTSAVDKKVSFVDLVELSNTSPQNEDKEHEEKTKDEKAIVSDIPQAKPETEAGNGTSKSASKTQLEQEDSSQLSEGQFADQSSASSGDETEITEDLEPEEQDEQCMADAVESVTDSDDCIVSSPVSTSLNPAAEKIRIEIISLSFTDNQITRDNTIQRLFVECKFSTFPAEETPVSLPKPRSGQWVYYNYSHVMHLDQANNKARRDVLKTMLQGTEPSPGSIRFTVVSDPPEDEQDLECEDIGFAYVRLSEIFQNKRDMIEQDIKVFNSPDDGTVIGRLKVTVEALNALRSIHKELRNSPEA
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(500899..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535213,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563238..563376,565645..565765,569110..569121))
location: region:500899-569121:-1
so has part: feature:569110-569121:-1:exon
so has part: feature:565645-565765:-1:exon
so has part: feature:563238-563376:-1:exon
so has part: feature:561397-561695:-1:exon
so has part: feature:560549-560657:-1:exon
so has part: feature:558398-558541:-1:exon
so has part: feature:555559-555664:-1:exon
so has part: feature:554107-554253:-1:exon
so has part: feature:553211-553284:-1:exon
so has part: feature:547842-547981:-1:exon
so has part: feature:544382-544488:-1:exon
so has part: feature:544056-544106:-1:exon
so has part: feature:542110-542289:-1:exon
so has part: feature:541577-541694:-1:exon
so has part: feature:540598-541050:-1:exon
so has part: feature:535981-536117:-1:exon
so has part: feature:534847-535213:-1:exon
so has part: feature:533247-533443:-1:exon
so has part: feature:532351-532434:-1:exon
so has part: feature:531446-531520:-1:exon
so has part: feature:528824-528986:-1:exon
so has part: feature:527480-527574:-1:exon
so has part: feature:514578-514761:-1:exon
so has part: feature:505408-505492:-1:exon
so has part: feature:501630-501763:-1:exon
so has part: feature:500899-501011:-1:exon

XP_008112093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569110-569121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565645-565765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563238-563376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561397-561695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560549-560657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558398-558541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555559-555664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554107-554253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553211-553284:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547842-547981:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:544382-544488:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:544056-544106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:542110-542289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541577-541694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:540598-541050:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535981-536117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:534847-535213:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:533247-533443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:532351-532434:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:531446-531520:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:528824-528986:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:527480-527574:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:514578-514761:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:505408-505492:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:501630-501763:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:500899-501011:-1:exon

rpgrip1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: rpgrip1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein fantom isoform X4
translation: MQSSAMSAAADETSEDLPVRDVGLGQGGFQEPAQNAKARQTVSRISREDLEDRYLRLHEENLLLKQHAHKQEDKIKRMATKLIRLVNDKKKAEQAGGGPKRRGQDVEMEEVIEQLQEKVRDLERQNESIRNRLISTKQQLQLQGHRHMPYHYVQARINTGLRKAAESVGIQERAKKGMRLQDIDIQALKSPQALPPKYGQNLLEEAKAEIRNLENVIESLKAHNEELEHSVEVLRSEIQKKESEFEEALLQLKEQQATGQRLTIRDNVTLIKLHKQLAEKSNEFAAMESKMLQLDENQRHLKVSHDALMAKGDELNLLLKEERLKCLNLERQLQANTFSKRRLDELQDRINDLEKERDLLKENYDKLYNSAFGVTHDQKWKLKEQQLKLEIAQLEAALKSDLADKNNILDRMKVEQDQNEKLAQENQELRLQYLEQKQQLDEMKNRMKFFTKESDVDAAELSEALMLIKVRRQQTNGDLTFLEKVEDDTQKDLERSMRELQATHAETVQELEKTRNMLIVQHKINKDYQAEVESVTQKMEALQQDYELKLEQYVQLLDVRAMRIRKLEAQLKDIAYGTKQYKFRPEILPDDPVDEFNETAHLERGENLFEIHISRVIFSAETTKSFGDQEPATFCTYAFYDFELQTTPIIRGLNPTYNFTSQYLVRMDDFFLQYLQKNTATLEIHHAYGMDFETTAACQLRFHEMLEQNGRVYGSAILVGVGREIQNYGTVEYWAKLKVPMDQAIRLYKERAKALGYITMNTKDQQPVLNPAQSSPSTEGNLNELHITTKCCSNLKCQMSGLQPSPYVVYKFFDFPDHDTSIIPSSNQPQFSDHMCFPVSMNVDLDRYLKAESLSLYVFDDNETEDGVYIGKANVPLISLAHDRYISGTFELTDSKGFSAGTISIELKWKFSYLQPPGSIVAADLSHYIQNEKPVKGQGEGPLPTPLFTSTAVRPQPKPRQRTSAVDKKVSFVDLVELSNTSPQNEDKEHEEKTKDEKAIVSDIPQAKPETEAGNGTSKSASKTQLEQEDSSQLSEGQFADQSSASSGDETEITEDLEPEEQDEQCMADAVESVTDSDDCIVSSPVSTSLNPAAEKIRIEIISLSFTDNQITRDNTIQRLFVECKFSTFPAEETPVSLPKPRSGQWVYYNYSHVMHLDQANNKARRDVLKTMLQGTEPSPGSIRFTVVSDPPEDEQDLECEDIGFAYVRLSEIFQNKRDMIEQDIKVFNSPDDGTVIGRLKVTVEALNALRSIHKELRNSPEA
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(500899..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535213,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563238..563376,565645..565735))
location: region:500899-565735:-1
so has part: feature:565645-565735:-1:exon
so has part: feature:563238-563376:-1:exon
so has part: feature:561397-561695:-1:exon
so has part: feature:560549-560657:-1:exon
so has part: feature:558398-558541:-1:exon
so has part: feature:555559-555664:-1:exon
so has part: feature:554107-554253:-1:exon
so has part: feature:553211-553284:-1:exon
so has part: feature:547842-547981:-1:exon
so has part: feature:544382-544488:-1:exon
so has part: feature:544056-544106:-1:exon
so has part: feature:542110-542289:-1:exon
so has part: feature:541577-541694:-1:exon
so has part: feature:540598-541050:-1:exon
so has part: feature:535981-536117:-1:exon
so has part: feature:534847-535213:-1:exon
so has part: feature:533247-533443:-1:exon
so has part: feature:532351-532434:-1:exon
so has part: feature:531446-531520:-1:exon
so has part: feature:528824-528986:-1:exon
so has part: feature:527480-527574:-1:exon
so has part: feature:514578-514761:-1:exon
so has part: feature:505408-505492:-1:exon
so has part: feature:501630-501763:-1:exon
so has part: feature:500899-501011:-1:exon

XP_008112095.1
type: Protein
SIO_000068: ncbiprotein

position:565735:-1
position: 565735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565645-565735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563238-563376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561397-561695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560549-560657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558398-558541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555559-555664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554107-554253:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553211-553284:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547842-547981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544382-544488:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:544056-544106:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:542110-542289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:541577-541694:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540598-541050:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:535981-536117:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:534847-535213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:533247-533443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:532351-532434:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:531446-531520:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:528824-528986:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:527480-527574:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:514578-514761:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:505408-505492:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:501630-501763:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500899-501011:-1:exon

rpgrip1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: rpgrip1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein fantom isoform X4
translation: MQSSAMSAAADETSEDLPVRDVGLGQGGFQEPAQNAKARQTVSRISREDLEDRYLRLHEENLLLKQHAHKQEDKIKRMATKLIRLVNDKKKAEQAGGGPKRRGQDVEMEEVIEQLQEKVRDLERQNESIRNRLISTKQQLQLQGHRHMPYHYVQARINTGLRKAAESVGIQERAKKGMRLQDIDIQALKSPQALPPKYGQNLLEEAKAEIRNLENVIESLKAHNEELEHSVEVLRSEIQKKESEFEEALLQLKEQQATGQRLTIRDNVTLIKLHKQLAEKSNEFAAMESKMLQLDENQRHLKVSHDALMAKGDELNLLLKEERLKCLNLERQLQANTFSKRRLDELQDRINDLEKERDLLKENYDKLYNSAFGVTHDQKWKLKEQQLKLEIAQLEAALKSDLADKNNILDRMKVEQDQNEKLAQENQELRLQYLEQKQQLDEMKNRMKFFTKESDVDAAELSEALMLIKVRRQQTNGDLTFLEKVEDDTQKDLERSMRELQATHAETVQELEKTRNMLIVQHKINKDYQAEVESVTQKMEALQQDYELKLEQYVQLLDVRAMRIRKLEAQLKDIAYGTKQYKFRPEILPDDPVDEFNETAHLERGENLFEIHISRVIFSAETTKSFGDQEPATFCTYAFYDFELQTTPIIRGLNPTYNFTSQYLVRMDDFFLQYLQKNTATLEIHHAYGMDFETTAACQLRFHEMLEQNGRVYGSAILVGVGREIQNYGTVEYWAKLKVPMDQAIRLYKERAKALGYITMNTKDQQPVLNPAQSSPSTEGNLNELHITTKCCSNLKCQMSGLQPSPYVVYKFFDFPDHDTSIIPSSNQPQFSDHMCFPVSMNVDLDRYLKAESLSLYVFDDNETEDGVYIGKANVPLISLAHDRYISGTFELTDSKGFSAGTISIELKWKFSYLQPPGSIVAADLSHYIQNEKPVKGQGEGPLPTPLFTSTAVRPQPKPRQRTSAVDKKVSFVDLVELSNTSPQNEDKEHEEKTKDEKAIVSDIPQAKPETEAGNGTSKSASKTQLEQEDSSQLSEGQFADQSSASSGDETEITEDLEPEEQDEQCMADAVESVTDSDDCIVSSPVSTSLNPAAEKIRIEIISLSFTDNQITRDNTIQRLFVECKFSTFPAEETPVSLPKPRSGQWVYYNYSHVMHLDQANNKARRDVLKTMLQGTEPSPGSIRFTVVSDPPEDEQDLECEDIGFAYVRLSEIFQNKRDMIEQDIKVFNSPDDGTVIGRLKVTVEALNALRSIHKELRNSPEA
SIO_010081: rpgrip1l
subclass of: SO_0000673
so part of: rpgrip1l
location: complement(join(500899..501011,501630..501763,505408..505492,514578..514761,527480..527574,528824..528986,531446..531520,532351..532434,533247..533443,534847..535213,535981..536117,540598..541050,541577..541694,542110..542289,544056..544106,544382..544488,547842..547981,553211..553284,554107..554253,555559..555664,558398..558541,560549..560657,561397..561695,563238..563376,565645..565735))
location: region:500899-565735:-1
so has part: feature:565645-565735:-1:exon
so has part: feature:563238-563376:-1:exon
so has part: feature:561397-561695:-1:exon
so has part: feature:560549-560657:-1:exon
so has part: feature:558398-558541:-1:exon
so has part: feature:555559-555664:-1:exon
so has part: feature:554107-554253:-1:exon
so has part: feature:553211-553284:-1:exon
so has part: feature:547842-547981:-1:exon
so has part: feature:544382-544488:-1:exon
so has part: feature:544056-544106:-1:exon
so has part: feature:542110-542289:-1:exon
so has part: feature:541577-541694:-1:exon
so has part: feature:540598-541050:-1:exon
so has part: feature:535981-536117:-1:exon
so has part: feature:534847-535213:-1:exon
so has part: feature:533247-533443:-1:exon
so has part: feature:532351-532434:-1:exon
so has part: feature:531446-531520:-1:exon
so has part: feature:528824-528986:-1:exon
so has part: feature:527480-527574:-1:exon
so has part: feature:514578-514761:-1:exon
so has part: feature:505408-505492:-1:exon
so has part: feature:501630-501763:-1:exon
so has part: feature:500899-501011:-1:exon

XP_008112096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565645-565735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563238-563376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561397-561695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560549-560657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558398-558541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555559-555664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554107-554253:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553211-553284:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547842-547981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544382-544488:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:544056-544106:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:542110-542289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:541577-541694:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540598-541050:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:535981-536117:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:534847-535213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:533247-533443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:532351-532434:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:531446-531520:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:528824-528986:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:527480-527574:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:514578-514761:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:505408-505492:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:501630-501763:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500899-501011:-1:exon

fto
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: fto
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 591856..888252
location: region:591856-888252:1
so has part: feature:591856-888252:1:exon
subclass of: SO_0000010

100556980
type: Gene
SIO_000068: ncbigene

position:591856:1
position: 591856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888252:1
position: 888252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591856-888252:1:exon

fto
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: fto
product: fat mass and obesity associated
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01073851.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 80 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008113918.1
SIO_010081: fto
subclass of: SO_0000673
so part of: fto
location: join(591856..591933,624207..624284,631127..631787,644700..>644843,652554..652697,668868..668987,704916..705040,887705..888252)
location: region:591856-888252:1
so has part: feature:591856-591933:1:exon
so has part: feature:624207-624284:1:exon
so has part: feature:631127-631787:1:exon
so has part: feature:644700-644843:1:exon
so has part: feature:652554-652697:1:exon
so has part: feature:668868-668987:1:exon
so has part: feature:704916-705040:1:exon
so has part: feature:887705-888252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:591856-591933:1:exon

position:591933:1
position: 591933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624207-624284:1:exon

position:624207:1
position: 624207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624284:1
position: 624284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631127-631787:1:exon

position:631127:1
position: 631127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631787:1
position: 631787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:644700-644843:1:exon

position:644700:1
position: 644700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644843:1
position: 644843
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 5
SIO_000628: feature:652554-652697:1:exon

position:652554:1
position: 652554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652697:1
position: 652697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:668868-668987:1:exon

position:668868:1
position: 668868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668987:1
position: 668987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:704916-705040:1:exon

position:704916:1
position: 704916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705040:1
position: 705040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:887705-888252:1:exon

position:887705:1
position: 887705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fto
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: fto
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01073851.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 80 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase FTO
translation: MRPYQPLNPKVPRDIDGPFHVFDYAKKRKLLDELGESQLPYLTPEDDGFHQLWKTKYSKLILKNAEMIPKEVHKGVQEAFLTLRKHACFFQDLVRIKGKDFFTPVSRILIGNPGCTYKYLNTRLFTVPWPVEGYEINYSHPEISKACKALIKLNDYLHGETVLALREQSLAETKEREDPPVTDSHRDYVPPITGTGPFLQDQSPSRVPKNDCANLKGRTSYNLTLLNYMDPQQIPFLKQEPYYGMGKMAVSWHHDENLVERSTVAVYSYCCEESTVDKLETEASNGRDPAIWHVALKVAWDIKTPGLAIPLHQGDCYFMLDDLNTTHQHCVLAGQQPRFSSTHRVAECSQGTLTYIMGRCDAVLENVHTDAELRCPSLKSLDISDIKRTGETHNEVEFEWLRQFWFQGKRYRKCTNWWDEPMAALEEKWRKMELKTSLLLCEFRKEEQMEEQRKEHVGCLLPLLVERQELRQEWLTRCNSQLADSLPEGEKPECHPYWEDDDASMPLPFNLEVIIAELQNLLES
SIO_010081: fto
subclass of: SO_0000673
so part of: fto
location: join(591856..591933,624207..624284,631127..631787,644700..>644843,652554..652697,668868..668987,704916..705040,887705..887849)
location: region:591856-887849:1
so has part: feature:591856-591933:1:exon
so has part: feature:624207-624284:1:exon
so has part: feature:631127-631787:1:exon
so has part: feature:644700-644843:1:exon
so has part: feature:652554-652697:1:exon
so has part: feature:668868-668987:1:exon
so has part: feature:704916-705040:1:exon
so has part: feature:887705-887849:1:exon

XP_008112125.1
type: Protein
SIO_000068: ncbiprotein

position:887849:1
position: 887849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591856-591933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624207-624284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631127-631787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644700-644843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:652554-652697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668868-668987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:704916-705040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:887705-887849:1:exon

LOC103279333
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC103279333
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1038193..1042475)
location: region:1038193-1042475:-1
so has part: feature:1038193-1042475:-1:exon
subclass of: SO_0000011

103279333
type: Gene
SIO_000068: ncbigene

position:1038193:-1
position: 1038193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042475:-1
position: 1042475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038193-1042475:-1:exon

LOC103279333
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 28377
nc RNA class: lncRNA
gene: LOC103279333
product: uncharacterized LOC103279333
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_506708.2
SIO_010081: LOC103279333
subclass of: SO_0000673
so part of: LOC103279333
location: complement(join(1038193..1038602,1041065..1042475))
location: region:1038193-1042475:-1
so has part: feature:1041065-1042475:-1:exon
so has part: feature:1038193-1038602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1041065-1042475:-1:exon

position:1041065:-1
position: 1041065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1038193-1038602:-1:exon

position:1038602:-1
position: 1038602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

irx3
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: irx3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<1057899..1058210)
location: region:1057899-1058210:-1
so has part: feature:1057899-1058210:-1:exon
subclass of: SO_0000010

103279334
type: Gene
SIO_000068: ncbigene

position:1057899:-1
position: 1057899
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1058210:-1
position: 1058210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057899-1058210:-1:exon

irx3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: irx3
product: iroquois homeobox 3
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01014040.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 327 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008113892.2
SIO_010081: irx3
subclass of: SO_0000673
so part of: irx3
location: complement(<1057899..1058210)
location: region:1057899-1058210:-1
so has part: feature:1057899-1058210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057899-1058210:-1:exon

irx3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: irx3
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01014040.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 327 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-3
translation: MAFSQLGYQYLRPIYPPSERPGGGASLANGARPVSAELSPSGRLSGVLSSMYAAGAPYAAAVAQGYGAFLPYAAAAAELPLFHQLGAPYELKESPGVPGASFSAAGASGAAFFPYGQFQFGDPSRPKNATRESTATLKAWLGEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRT
SIO_010081: irx3
subclass of: SO_0000673
so part of: irx3
location: complement(<1057899..1058153)
location: region:1057899-1058153:-1
so has part: feature:1057899-1058153:-1:exon

XP_008112099.1
type: Protein
SIO_000068: ncbiprotein

position:1058153:-1
position: 1058153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057899-1058153:-1:exon

LOC103279335
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC103279335
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1059755..1060521)
location: region:1059755-1060521:-1
so has part: feature:1059755-1060521:-1:exon

103279335
type: Gene
SIO_000068: ncbigene

position:1059755:-1
position: 1059755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060521:-1
position: 1060521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059755-1060521:-1:exon

LOC103279335
type: Exon
subclass of: SO_0000147
RO_0002162: 28377
gene: LOC103279335
inference: similar to RNA sequence, mRNA (same species):INSD:GAEC01095655.1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC103279335
subclass of: SO_0000673
so part of: LOC103279335
location: complement(1059755..1060521)
location: region:1059755-1060521:-1
so has part: feature:1059755-1060521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1059755-1060521:-1:exon

LOC100557177
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC100557177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1196673..1197871
location: region:1196673-1197871:1
so has part: feature:1196673-1197871:1:exon

100557177
type: Gene
SIO_000068: ncbigene

position:1196673:1
position: 1196673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197871:1
position: 1197871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196673-1197871:1:exon

LOC100557177
type: Exon
subclass of: SO_0000147
RO_0002162: 28377
gene: LOC100557177
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100557177
subclass of: SO_0000673
so part of: LOC100557177
location: 1196673..1197871
location: region:1196673-1197871:1
so has part: feature:1196673-1197871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1196673-1197871:1:exon

irx6
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: irx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2123713..2133667
location: region:2123713-2133667:1
so has part: feature:2123713-2133667:1:exon
subclass of: SO_0000010

100557370
type: Gene
SIO_000068: ncbigene

position:2123713:1
position: 2123713
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2133667:1
position: 2133667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2123713-2133667:1:exon

irx6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: irx6
product: iroquois homeobox 6
inference: similar to RNA sequence, mRNA (same species):INSD:GAFD01009303.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 125 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008113894.2
SIO_010081: irx6
subclass of: SO_0000673
so part of: irx6
location: join(<2123713..2123828,2125167..2125474,2127098..2127724,2131006..2131111,2132286..2133667)
location: region:2123713-2133667:1
so has part: feature:2123713-2123828:1:exon
so has part: feature:2125167-2125474:1:exon
so has part: feature:2127098-2127724:1:exon
so has part: feature:2131006-2131111:1:exon
so has part: feature:2132286-2133667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2123713-2123828:1:exon

position:2123828:1
position: 2123828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2125167-2125474:1:exon

position:2125167:1
position: 2125167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2125474:1
position: 2125474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2127098-2127724:1:exon

position:2127098:1
position: 2127098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2127724:1
position: 2127724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2131006-2131111:1:exon

position:2131006:1
position: 2131006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2131111:1
position: 2131111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2132286-2133667:1:exon

position:2132286:1
position: 2132286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

irx6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: irx6
inference: similar to RNA sequence, mRNA (same species):INSD:GAFD01009303.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 93 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-6
translation: MYGSPYAAAASQGYANYLPYGADPSALYTTLNSQYDLKEGSSALHPGITQPTATAYYTYEPTFGQYQYDRYGTVDFSSSARRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGEERQEDARRNGEDCVSEAEDKDPKSCKEEKELRLSDLEDMEDEDPEIKAEAEQKHPHQEGLLIGSNALVESQKSNCNLTPSGHFHTFSCAKVDSTVTGDFLGHKGATLVGSLGSQVQAYEAAEKPRIWSLAHTAGANVIVGPTSNPAQRTESPDCLVVRGRLPGSGGQYSEGRPVGGFVRTQPIHDKALEELAQPAKIFKNSTFNLQSISLNYASYPMLGETCQYAAGAEGFGRGMRAAQDHLNEVCLSQQKLRTAFRPVLKR
SIO_010081: irx6
subclass of: SO_0000673
so part of: irx6
location: join(<2123713..2123828,2125167..2125474,2127098..2127724,2131006..2131106)
location: region:2123713-2131106:1
so has part: feature:2123713-2123828:1:exon
so has part: feature:2125167-2125474:1:exon
so has part: feature:2127098-2127724:1:exon
so has part: feature:2131006-2131106:1:exon

XP_008112101.1
type: Protein
SIO_000068: ncbiprotein

position:2131106:1
position: 2131106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2123713-2123828:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2125167-2125474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2127098-2127724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2131006-2131106:1:exon

mmp2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: mmp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2265655..2308793
location: region:2265655-2308793:1
so has part: feature:2265655-2308793:1:exon
subclass of: SO_0000010

100557569
type: Gene
SIO_000068: ncbigene

position:2265655:1
position: 2265655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308793:1
position: 2308793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2265655-2308793:1:exon

mmp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: mmp2
product: matrix metallopeptidase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_003222922.3
SIO_010081: mmp2
subclass of: SO_0000673
so part of: mmp2
location: join(2265655..2266115,2271822..2272048,2279442..2279590,2289073..2289201,2290921..2291094,2293974..2294147,2294394..2294567,2296570..2296725,2296864..2296993,2300695..2300831,2304097..2304256,2307073..2307182,2308444..2308793)
location: region:2265655-2308793:1
so has part: feature:2265655-2266115:1:exon
so has part: feature:2271822-2272048:1:exon
so has part: feature:2279442-2279590:1:exon
so has part: feature:2289073-2289201:1:exon
so has part: feature:2290921-2291094:1:exon
so has part: feature:2293974-2294147:1:exon
so has part: feature:2294394-2294567:1:exon
so has part: feature:2296570-2296725:1:exon
so has part: feature:2296864-2296993:1:exon
so has part: feature:2300695-2300831:1:exon
so has part: feature:2304097-2304256:1:exon
so has part: feature:2307073-2307182:1:exon
so has part: feature:2308444-2308793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2265655-2266115:1:exon

position:2266115:1
position: 2266115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2271822-2272048:1:exon

position:2271822:1
position: 2271822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2272048:1
position: 2272048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2279442-2279590:1:exon

position:2279442:1
position: 2279442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2279590:1
position: 2279590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2289073-2289201:1:exon

position:2289073:1
position: 2289073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2289201:1
position: 2289201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2290921-2291094:1:exon

position:2290921:1
position: 2290921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2291094:1
position: 2291094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2293974-2294147:1:exon

position:2293974:1
position: 2293974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2294147:1
position: 2294147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2294394-2294567:1:exon

position:2294394:1
position: 2294394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2294567:1
position: 2294567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2296570-2296725:1:exon

position:2296570:1
position: 2296570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296725:1
position: 2296725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2296864-2296993:1:exon

position:2296864:1
position: 2296864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296993:1
position: 2296993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2300695-2300831:1:exon

position:2300695:1
position: 2300695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2300831:1
position: 2300831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2304097-2304256:1:exon

position:2304097:1
position: 2304097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2304256:1
position: 2304256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2307073-2307182:1:exon

position:2307073:1
position: 2307073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2307182:1
position: 2307182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2308444-2308793:1:exon

position:2308444:1
position: 2308444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mmp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: mmp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 72 kDa type IV collagenase
translation: MEIHLSFKFVGCICKVLLLQLSIFHPTSAPPPPTFRLSEDVAGRELIPSPIIKFPGDVSPKTDKELALQYLNKYYGCPKDSCNLFVLKDTLKKMQKFFGLPQTGELDQNTVETMRKPRCGNPDVANYNFFPRKPKWEKNLITYRILGYTPDLDSETVDDAFARAFKVWSDVTPLSFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEFCKFPYLFNGKEYNSCTNEGRSDGFLWCSTTYNFDTDGKYGFCPHESLFTMAGNADGQPCKFPFKFQGSTYDSCTTEGRTDGYRWCATTEDYDRDKKFGFCPETAMSTVGGNSEGAPCVFPFIFLGNKYESCTSSGRQDGKMWCSSTSNYDEDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGALMAPIYTYTKYFRLSQDDVQGIQELYGGSTDVGPGPSPTLGPVTPELCGQDIVFDAVAQIRGEIFFFKDRFIWRTANQRDRLTGPLLTATFWSEVPEKVDAVYEAPQEEKTVFFSGNEYWIYSASTLERGYPKRLTSLGLPPDVQHVNAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNGVPDNLDAVLDVSGSGHSYFFKDWYYLKLEDQSLKIVKVGNVKSDWLGC
SIO_010081: mmp2
subclass of: SO_0000673
so part of: mmp2
location: join(2265912..2266115,2271822..2272048,2279442..2279590,2289073..2289201,2290921..2291094,2293974..2294147,2294394..2294567,2296570..2296725,2296864..2296993,2300695..2300831,2304097..2304256,2307073..2307182,2308444..2308547)
location: region:2265912-2308547:1
so has part: feature:2265912-2266115:1:exon
so has part: feature:2271822-2272048:1:exon
so has part: feature:2279442-2279590:1:exon
so has part: feature:2289073-2289201:1:exon
so has part: feature:2290921-2291094:1:exon
so has part: feature:2293974-2294147:1:exon
so has part: feature:2294394-2294567:1:exon
so has part: feature:2296570-2296725:1:exon
so has part: feature:2296864-2296993:1:exon
so has part: feature:2300695-2300831:1:exon
so has part: feature:2304097-2304256:1:exon
so has part: feature:2307073-2307182:1:exon
so has part: feature:2308444-2308547:1:exon

XP_003222970.1
type: Protein
SIO_000068: ncbiprotein

position:2265912:1
position: 2265912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308547:1
position: 2308547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2265912-2266115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2271822-2272048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2279442-2279590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2289073-2289201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2290921-2291094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2293974-2294147:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2294394-2294567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2296570-2296725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2296864-2296993:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2300695-2300831:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2304097-2304256:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2307073-2307182:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2308444-2308547:1:exon

lpcat2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: lpcat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2320240..2362077
location: region:2320240-2362077:1
so has part: feature:2320240-2362077:1:exon
subclass of: SO_0000010

100557762
type: Gene
SIO_000068: ncbigene

position:2320240:1
position: 2320240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2362077:1
position: 2362077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2320240-2362077:1:exon

lpcat2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: lpcat2
product: lysophosphatidylcholine acyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_003222923.2
SIO_010081: lpcat2
subclass of: SO_0000673
so part of: lpcat2
location: join(2320240..2320468,2332086..2332225,2334139..2334356,2338033..2338145,2340302..2340362,2342161..2342219,2342334..2342368,2342576..2342630,2344064..2344146,2346949..2347074,2349649..2349802,2358506..2358604,2359903..2360044,2361183..2362077)
location: region:2320240-2362077:1
so has part: feature:2320240-2320468:1:exon
so has part: feature:2332086-2332225:1:exon
so has part: feature:2334139-2334356:1:exon
so has part: feature:2338033-2338145:1:exon
so has part: feature:2340302-2340362:1:exon
so has part: feature:2342161-2342219:1:exon
so has part: feature:2342334-2342368:1:exon
so has part: feature:2342576-2342630:1:exon
so has part: feature:2344064-2344146:1:exon
so has part: feature:2346949-2347074:1:exon
so has part: feature:2349649-2349802:1:exon
so has part: feature:2358506-2358604:1:exon
so has part: feature:2359903-2360044:1:exon
so has part: feature:2361183-2362077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2320240-2320468:1:exon

position:2320468:1
position: 2320468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2332086-2332225:1:exon

position:2332086:1
position: 2332086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2332225:1
position: 2332225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2334139-2334356:1:exon

position:2334139:1
position: 2334139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334356:1
position: 2334356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2338033-2338145:1:exon

position:2338033:1
position: 2338033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338145:1
position: 2338145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2340302-2340362:1:exon

position:2340302:1
position: 2340302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340362:1
position: 2340362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2342161-2342219:1:exon

position:2342161:1
position: 2342161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342219:1
position: 2342219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2342334-2342368:1:exon

position:2342334:1
position: 2342334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342368:1
position: 2342368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2342576-2342630:1:exon

position:2342576:1
position: 2342576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342630:1
position: 2342630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2344064-2344146:1:exon

position:2344064:1
position: 2344064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344146:1
position: 2344146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2346949-2347074:1:exon

position:2346949:1
position: 2346949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2347074:1
position: 2347074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2349649-2349802:1:exon

position:2349649:1
position: 2349649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2349802:1
position: 2349802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2358506-2358604:1:exon

position:2358506:1
position: 2358506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2358604:1
position: 2358604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2359903-2360044:1:exon

position:2359903:1
position: 2359903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2360044:1
position: 2360044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2361183-2362077:1:exon

position:2361183:1
position: 2361183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lpcat2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: lpcat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidylcholine acyltransferase 2
translation: MSSSPPAPSSPPPPRGLAFPRQESLASPTVLNPFVQEARLDPQAKTRAILFGLILVPLRLICMFLILAMAWPFALLATFGAPEKGTMPLQGWKRKVSYSALIFLGHVLFFVMGFWVKVKGKVARPEEAPIFAVAPHSSFFDGIVCIVAGLPSTVSRQENLMAPFVGRILNSLQPVTVSRVDPDSRKNTIDEITRRATSGGQWPQVLVFPEGTCTNRSCLITFKQGAFIPGVPVQPVLIRYPNKLDTVTWTWQGYSFNEALVLTLCQLFTKMEVEFLPVHIPTDEEKHDPALFANRVRSKMSSALGVPVTDHTYEDCRLMISAGNLTLPMEAGLVEFTKISKKLNLKWDNIREQLSQFAAIANASKGGRIGIEEFANYLKLPVSEVLGELFALFDRNGDGSIDFREYVIGLSVLCNPANTEQTIQMAFQLFDIDEDGIISEDEFALIIRSSLGLPDLDVSNLFKEIDADKTNKLSYEEFKNFALKHPEYAKLFTTYIELQRNQMCIEAEFEPAATPNTSVSEKSSVPRNKVCPQTSEDDHSSVSDKKED
SIO_010081: lpcat2
subclass of: SO_0000673
so part of: lpcat2
location: join(2320328..2320468,2332086..2332225,2334139..2334356,2338033..2338145,2340302..2340362,2342161..2342219,2342334..2342368,2342576..2342630,2344064..2344146,2346949..2347074,2349649..2349802,2358506..2358604,2359903..2360044,2361183..2361403)
location: region:2320328-2361403:1
so has part: feature:2320328-2320468:1:exon
so has part: feature:2332086-2332225:1:exon
so has part: feature:2334139-2334356:1:exon
so has part: feature:2338033-2338145:1:exon
so has part: feature:2340302-2340362:1:exon
so has part: feature:2342161-2342219:1:exon
so has part: feature:2342334-2342368:1:exon
so has part: feature:2342576-2342630:1:exon
so has part: feature:2344064-2344146:1:exon
so has part: feature:2346949-2347074:1:exon
so has part: feature:2349649-2349802:1:exon
so has part: feature:2358506-2358604:1:exon
so has part: feature:2359903-2360044:1:exon
so has part: feature:2361183-2361403:1:exon

XP_003222971.1
type: Protein
SIO_000068: ncbiprotein

position:2320328:1
position: 2320328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2361403:1
position: 2361403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2320328-2320468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2332086-2332225:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2334139-2334356:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2338033-2338145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2340302-2340362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2342161-2342219:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2342334-2342368:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2342576-2342630:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2344064-2344146:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2346949-2347074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2349649-2349802:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2358506-2358604:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2359903-2360044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2361183-2361403:1:exon

capns2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: capns2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2349873..2354180
location: region:2349873-2354180:1
so has part: feature:2349873-2354180:1:exon
subclass of: SO_0000010

103279336
type: Gene
SIO_000068: ncbigene

position:2349873:1
position: 2349873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2354180:1
position: 2354180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2349873-2354180:1:exon

capns2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: capns2
product: calpain small subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 21 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016994754.1
SIO_010081: capns2
subclass of: SO_0000673
so part of: capns2
location: 2349873..2354180
location: region:2349873-2354180:1
so has part: feature:2349873-2354180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2349873-2354180:1:exon

capns2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: capns2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain small subunit 2
translation: MFLAQALMDAASGGKAGSGSGSGSSGSRALAAAGGALLKSLTGGSGGGGGAGLLKSSGGQGGGAGNALMKGLGGLLAGGGGGGGGKAGNVMGLIGGLVNIISEAAAQYTPEPPPPARSHFANVEANESEEMRQFRRLFAQLAGDDMAVCPTELMGILNKVMARHQDLKSQGFSLDTCRSMVSVMDSDTTGKLDFYQFRYLWNNIKKWQAVYKRYASPNSGTIEMARLPEAFKAAGFNMHEQLYALMIRRYANEDGTMDFNNFISCLVRLDGMFRAFKALDRDGDGKVQMNLQDWLQLTMYS
SIO_010081: capns2
subclass of: SO_0000673
so part of: capns2
location: 2350283..2351188
location: region:2350283-2351188:1
so has part: feature:2350283-2351188:1:exon

XP_016850243.1
type: Protein
SIO_000068: ncbiprotein

position:2350283:1
position: 2350283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2351188:1
position: 2351188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2350283-2351188:1:exon

LOC100555614
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC100555614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2365407..2370031
location: region:2365407-2370031:1
so has part: feature:2365407-2370031:1:exon

100555614
type: Gene
SIO_000068: ncbigene

position:2365407:1
position: 2365407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2370031:1
position: 2370031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365407-2370031:1:exon

LOC100555614
type: Exon
subclass of: SO_0000147
RO_0002162: 28377
gene: LOC100555614
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100555614
subclass of: SO_0000673
so part of: LOC100555614
location: 2365407..2365719
location: region:2365407-2365719:1
so has part: feature:2365407-2365719:1:exon

position:2365719:1
position: 2365719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365407-2365719:1:exon

LOC100555614
type: Exon
subclass of: SO_0000147
RO_0002162: 28377
gene: LOC100555614
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100555614
subclass of: SO_0000673
so part of: LOC100555614
location: 2368724..2369044
location: region:2368724-2369044:1
so has part: feature:2368724-2369044:1:exon

position:2368724:1
position: 2368724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2369044:1
position: 2369044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368724-2369044:1:exon

LOC100555614
type: Exon
subclass of: SO_0000147
RO_0002162: 28377
gene: LOC100555614
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100555614
subclass of: SO_0000673
so part of: LOC100555614
location: 2369826..2370031
location: region:2369826-2370031:1
so has part: feature:2369826-2370031:1:exon

position:2369826:1
position: 2369826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2369826-2370031:1:exon

slc6a2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: slc6a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2383440..2467921
location: region:2383440-2467921:1
so has part: feature:2383440-2467921:1:exon
subclass of: SO_0000010

100557960
type: Gene
SIO_000068: ncbigene

position:2383440:1
position: 2383440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2467921:1
position: 2467921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383440-2467921:1:exon

slc6a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: slc6a2
product: solute carrier family 6 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016994755.1
SIO_010081: slc6a2
subclass of: SO_0000673
so part of: slc6a2
location: join(2383440..2383876,2422086..2422217,2422397..2422631,2431647..2431785,2432759..2432893,2436577..2436680,2439890..2440014,2441457..2441569,2441958..2442086,2448221..2448320,2456437..2456537,2459402..2459569,2465385..2467921)
location: region:2383440-2467921:1
so has part: feature:2383440-2383876:1:exon
so has part: feature:2422086-2422217:1:exon
so has part: feature:2422397-2422631:1:exon
so has part: feature:2431647-2431785:1:exon
so has part: feature:2432759-2432893:1:exon
so has part: feature:2436577-2436680:1:exon
so has part: feature:2439890-2440014:1:exon
so has part: feature:2441457-2441569:1:exon
so has part: feature:2441958-2442086:1:exon
so has part: feature:2448221-2448320:1:exon
so has part: feature:2456437-2456537:1:exon
so has part: feature:2459402-2459569:1:exon
so has part: feature:2465385-2467921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2383440-2383876:1:exon

position:2383876:1
position: 2383876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2422086-2422217:1:exon

position:2422086:1
position: 2422086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2422217:1
position: 2422217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2422397-2422631:1:exon

position:2422397:1
position: 2422397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2422631:1
position: 2422631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2431647-2431785:1:exon

position:2431647:1
position: 2431647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431785:1
position: 2431785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2432759-2432893:1:exon

position:2432759:1
position: 2432759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432893:1
position: 2432893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2436577-2436680:1:exon

position:2436577:1
position: 2436577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436680:1
position: 2436680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2439890-2440014:1:exon

position:2439890:1
position: 2439890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2440014:1
position: 2440014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2441457-2441569:1:exon

position:2441457:1
position: 2441457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2441569:1
position: 2441569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2441958-2442086:1:exon

position:2441958:1
position: 2441958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2442086:1
position: 2442086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2448221-2448320:1:exon

position:2448221:1
position: 2448221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2448320:1
position: 2448320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2456437-2456537:1:exon

position:2456437:1
position: 2456437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2456537:1
position: 2456537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2459402-2459569:1:exon

position:2459402:1
position: 2459402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2459569:1
position: 2459569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2465385-2467921:1:exon

position:2465385:1
position: 2465385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slc6a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: slc6a2
product: solute carrier family 6 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003222924.3
SIO_010081: slc6a2
subclass of: SO_0000673
so part of: slc6a2
location: join(2383536..2383876,2422086..2422217,2422397..2422631,2431647..2431785,2432759..2432893,2436577..2436680,2439890..2440014,2441457..2441569,2441958..2442086,2448221..2448320,2456437..2456537,2459402..2459569,2465385..2465456,2465603..2467921)
location: region:2383536-2467921:1
so has part: feature:2383536-2383876:1:exon
so has part: feature:2422086-2422217:1:exon
so has part: feature:2422397-2422631:1:exon
so has part: feature:2431647-2431785:1:exon
so has part: feature:2432759-2432893:1:exon
so has part: feature:2436577-2436680:1:exon
so has part: feature:2439890-2440014:1:exon
so has part: feature:2441457-2441569:1:exon
so has part: feature:2441958-2442086:1:exon
so has part: feature:2448221-2448320:1:exon
so has part: feature:2456437-2456537:1:exon
so has part: feature:2459402-2459569:1:exon
so has part: feature:2465385-2465456:1:exon
so has part: feature:2465603-2467921:1:exon

position:2383536:1
position: 2383536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383536-2383876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2422086-2422217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2422397-2422631:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2431647-2431785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2432759-2432893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2436577-2436680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2439890-2440014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2441457-2441569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2441958-2442086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2448221-2448320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2456437-2456537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2459402-2459569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2465385-2465456:1:exon

position:2465456:1
position: 2465456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2465603-2467921:1:exon

position:2465603:1
position: 2465603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slc6a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: slc6a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent noradrenaline transporter isoform X1
translation: MIQPRSPQPEQDSSPQPPLKKDVELILVKEQNGVQYTSTSLLESGGGGGVGPFLPGETPLPERETWAKKIDFLLSVIGFSVDLANVWRFPYLCYKNGGGAFLIPYILFLIIAGMPLFYMELALGQYNREGAATVWKICPLFKGVGYAVILIALYVGFYYNVIIAWSLYYLFSSFTFGELPWTKCGNPWNSPNCTDPKNASAFIPGTSYAKYKITPAAEFYERQVLQLNKSRGIQDVGMPRWELTLCLLVVVIVLFFSLWKGVKTSGKVVWITATLPYLVISVLLVRGLTLPGAYDGIRAYLNIDLRRLKEATVWIDAATQIFYSLGAGFGVLIAFASYNEFNNNCYRDALMTSTINCVTSFISGFAIFSILGYMAHEYKVDIKDVATEGPGLVFILYPEAISTLKGSTFWAIVFFIMLLTLGIDSSMGGMEAVITGLADDFQIIKRRRKLFTFCVSFGTFLLALFCITNGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSEDIQQMMGFKPGLYWRLCWKFVSPAFLLFVVIVSVTTFKPLTYDEYVFPPWANTVGWGIASSSMILVPACILYKLLKARGTFKQRLAYCITPENEHHLVAEGNVRQFKLKHWLSI
SIO_010081: slc6a2
subclass of: SO_0000673
so part of: slc6a2
location: join(2383582..2383876,2422086..2422217,2422397..2422631,2431647..2431785,2432759..2432893,2436577..2436680,2439890..2440014,2441457..2441569,2441958..2442086,2448221..2448320,2456437..2456537,2459402..2459569,2465385..2465456,2465603..2465626)
location: region:2383582-2465626:1
so has part: feature:2383582-2383876:1:exon
so has part: feature:2422086-2422217:1:exon
so has part: feature:2422397-2422631:1:exon
so has part: feature:2431647-2431785:1:exon
so has part: feature:2432759-2432893:1:exon
so has part: feature:2436577-2436680:1:exon
so has part: feature:2439890-2440014:1:exon
so has part: feature:2441457-2441569:1:exon
so has part: feature:2441958-2442086:1:exon
so has part: feature:2448221-2448320:1:exon
so has part: feature:2456437-2456537:1:exon
so has part: feature:2459402-2459569:1:exon
so has part: feature:2465385-2465456:1:exon
so has part: feature:2465603-2465626:1:exon

XP_003222972.1
type: Protein
SIO_000068: ncbiprotein

position:2383582:1
position: 2383582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465626:1
position: 2465626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383582-2383876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2422086-2422217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2422397-2422631:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2431647-2431785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2432759-2432893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2436577-2436680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2439890-2440014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2441457-2441569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2441958-2442086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2448221-2448320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2456437-2456537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2459402-2459569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2465385-2465456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2465603-2465626:1:exon

slc6a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: slc6a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent noradrenaline transporter isoform X2
translation: MIQPRSPQPEQDSSPQPPLKKDVELILVKEQNGVQYTSTSLLESGGGGGVGPFLPGETPLPERETWAKKIDFLLSVIGFSVDLANVWRFPYLCYKNGGGAFLIPYILFLIIAGMPLFYMELALGQYNREGAATVWKICPLFKGVGYAVILIALYVGFYYNVIIAWSLYYLFSSFTFGELPWTKCGNPWNSPNCTDPKNASAFIPGTSYAKYKITPAAEFYERQVLQLNKSRGIQDVGMPRWELTLCLLVVVIVLFFSLWKGVKTSGKVVWITATLPYLVISVLLVRGLTLPGAYDGIRAYLNIDLRRLKEATVWIDAATQIFYSLGAGFGVLIAFASYNEFNNNCYRDALMTSTINCVTSFISGFAIFSILGYMAHEYKVDIKDVATEGPGLVFILYPEAISTLKGSTFWAIVFFIMLLTLGIDSSMGGMEAVITGLADDFQIIKRRRKLFTFCVSFGTFLLALFCITNGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSEDIQQMMGFKPGLYWRLCWKFVSPAFLLFVVIVSVTTFKPLTYDEYVFPPWANTVGWGIASSSMILVPACILYKLLKARGTFKQRLAYCITPENEHHLVAEGNVRQFKVSILCIPSFHFVEKKTLTKSHMGSE
SIO_010081: slc6a2
subclass of: SO_0000673
so part of: slc6a2
location: join(2383582..2383876,2422086..2422217,2422397..2422631,2431647..2431785,2432759..2432893,2436577..2436680,2439890..2440014,2441457..2441569,2441958..2442086,2448221..2448320,2456437..2456537,2459402..2459569,2465385..2465534)
location: region:2383582-2465534:1
so has part: feature:2383582-2383876:1:exon
so has part: feature:2422086-2422217:1:exon
so has part: feature:2422397-2422631:1:exon
so has part: feature:2431647-2431785:1:exon
so has part: feature:2432759-2432893:1:exon
so has part: feature:2436577-2436680:1:exon
so has part: feature:2439890-2440014:1:exon
so has part: feature:2441457-2441569:1:exon
so has part: feature:2441958-2442086:1:exon
so has part: feature:2448221-2448320:1:exon
so has part: feature:2456437-2456537:1:exon
so has part: feature:2459402-2459569:1:exon
so has part: feature:2465385-2465534:1:exon

XP_016850244.1
type: Protein
SIO_000068: ncbiprotein

position:2465534:1
position: 2465534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383582-2383876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2422086-2422217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2422397-2422631:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2431647-2431785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2432759-2432893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2436577-2436680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2439890-2440014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2441457-2441569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2441958-2442086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2448221-2448320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2456437-2456537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2459402-2459569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2465385-2465534:1:exon

siah1
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: siah1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2553118..2573734
location: region:2553118-2573734:1
so has part: feature:2553118-2573734:1:exon
subclass of: SO_0000010

100555807
type: Gene
SIO_000068: ncbigene

position:2553118:1
position: 2553118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2573734:1
position: 2573734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553118-2573734:1:exon

siah1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: siah1
product: siah E3 ubiquitin protein ligase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_008113896.2
SIO_010081: siah1
subclass of: SO_0000673
so part of: siah1
location: join(2553118..2553429,2571651..2573734)
location: region:2553118-2573734:1
so has part: feature:2553118-2553429:1:exon
so has part: feature:2571651-2573734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2553118-2553429:1:exon

position:2553429:1
position: 2553429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2571651-2573734:1:exon

position:2571651:1
position: 2571651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

siah1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: siah1
product: siah E3 ubiquitin protein ligase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_003222913.3
SIO_010081: siah1
subclass of: SO_0000673
so part of: siah1
location: join(2566067..2566655,2571651..2573734)
location: region:2566067-2573734:1
so has part: feature:2566067-2566655:1:exon
so has part: feature:2571651-2573734:1:exon

position:2566067:1
position: 2566067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566067-2566655:1:exon

position:2566655:1
position: 2566655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2571651-2573734:1:exon

siah1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: siah1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SIAH1 isoform X1
translation: MTGKSAFSFLYAWKGVLDTCLPGNKASKRKEMSRQTATALPTGTSKCTPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
SIO_010081: siah1
subclass of: SO_0000673
so part of: siah1
location: join(2566565..2566655,2571651..2572501)
location: region:2566565-2572501:1
so has part: feature:2566565-2566655:1:exon
so has part: feature:2571651-2572501:1:exon

XP_003222961.1
type: Protein
SIO_000068: ncbiprotein

position:2566565:1
position: 2566565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2572501:1
position: 2572501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566565-2566655:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2571651-2572501:1:exon

LOC107983036
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC107983036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2571651..2572985
location: region:2571651-2572985:1
so has part: feature:2571651-2572985:1:exon

107983036
type: Gene
SIO_000068: ncbigene

position:2572985:1
position: 2572985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571651-2572985:1:exon

LOC107983036
type: Exon
subclass of: SO_0000147
RO_0002162: 28377
gene: LOC107983036
inference: similar to RNA sequence, mRNA (same species):INSD:GAFM01014951.1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107983036
subclass of: SO_0000673
so part of: LOC107983036
location: 2571651..2572985
location: region:2571651-2572985:1
so has part: feature:2571651-2572985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2571651-2572985:1:exon

siah1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: siah1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SIAH1 isoform X2
translation: MSRQTATALPTGTSKCTPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
SIO_010081: siah1
subclass of: SO_0000673
so part of: siah1
location: 2571653..2572501
location: region:2571653-2572501:1
so has part: feature:2571653-2572501:1:exon

XP_008112103.1
type: Protein
SIO_000068: ncbiprotein

position:2571653:1
position: 2571653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571653-2572501:1:exon

lonp2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: lonp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2582356..2631385)
location: region:2582356-2631385:-1
so has part: feature:2582356-2631385:-1:exon
subclass of: SO_0000010

100556002
type: Gene
SIO_000068: ncbigene

position:2582356:-1
position: 2582356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2631385:-1
position: 2631385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2582356-2631385:-1:exon

lonp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: lonp2
product: lon peptidase 2, peroxisomal
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_003222914.3
SIO_010081: lonp2
subclass of: SO_0000673
so part of: lonp2
location: complement(join(2582356..2583005,2584695..2584885,2586009..2586216,2587467..2587609,2593797..2593930,2595990..2596116,2596905..2597055,2607059..2607200,2618881..2619139,2619736..2619830,2620234..2620397,2621215..2621337,2623911..2624042,2626895..2627129,2630944..2631385))
location: region:2582356-2631385:-1
so has part: feature:2630944-2631385:-1:exon
so has part: feature:2626895-2627129:-1:exon
so has part: feature:2623911-2624042:-1:exon
so has part: feature:2621215-2621337:-1:exon
so has part: feature:2620234-2620397:-1:exon
so has part: feature:2619736-2619830:-1:exon
so has part: feature:2618881-2619139:-1:exon
so has part: feature:2607059-2607200:-1:exon
so has part: feature:2596905-2597055:-1:exon
so has part: feature:2595990-2596116:-1:exon
so has part: feature:2593797-2593930:-1:exon
so has part: feature:2587467-2587609:-1:exon
so has part: feature:2586009-2586216:-1:exon
so has part: feature:2584695-2584885:-1:exon
so has part: feature:2582356-2583005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2630944-2631385:-1:exon

position:2630944:-1
position: 2630944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2626895-2627129:-1:exon

position:2626895:-1
position: 2626895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2627129:-1
position: 2627129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2623911-2624042:-1:exon

position:2623911:-1
position: 2623911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624042:-1
position: 2624042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2621215-2621337:-1:exon

position:2621215:-1
position: 2621215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2621337:-1
position: 2621337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2620234-2620397:-1:exon

position:2620234:-1
position: 2620234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2620397:-1
position: 2620397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2619736-2619830:-1:exon

position:2619736:-1
position: 2619736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619830:-1
position: 2619830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2618881-2619139:-1:exon

position:2618881:-1
position: 2618881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619139:-1
position: 2619139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2607059-2607200:-1:exon

position:2607059:-1
position: 2607059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2607200:-1
position: 2607200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2596905-2597055:-1:exon

position:2596905:-1
position: 2596905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2597055:-1
position: 2597055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2595990-2596116:-1:exon

position:2595990:-1
position: 2595990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596116:-1
position: 2596116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2593797-2593930:-1:exon

position:2593797:-1
position: 2593797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2593930:-1
position: 2593930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2587467-2587609:-1:exon

position:2587467:-1
position: 2587467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2587609:-1
position: 2587609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2586009-2586216:-1:exon

position:2586009:-1
position: 2586009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2586216:-1
position: 2586216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2584695-2584885:-1:exon

position:2584695:-1
position: 2584695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2584885:-1
position: 2584885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2582356-2583005:-1:exon

position:2583005:-1
position: 2583005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lonp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: lonp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lon protease homolog 2, peroxisomal
translation: MAASSSIQIPSRLPLLLTPESVLLPGSTMRASVDSPRNMQLVRSRLLKGTSLKSTILGLVPDSRDPPSEQDPLPPLHRIGTAALAIQVVGSNWPKPHYTLLVTGLCRFQILQLVKEKPYPVAEVEQLDRLEQFTNKSTSEEELGELSDQLYKYAVQLVEMLDMSIPAVAKLRRLLDNLPREALPDILTSIIRTSNQEKLQILDAVGLEERFKMTIPLLVRQIEGLKLLQKTRKPKQDDDKRVIAIRPIRRLAHIPGALEEEEEDEDHDDIVILEKKIRTSSMPEQALKVCVKEVKRLKKMPQSMPEYALTRNYLELMVELPWSKSTKDCLDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHSFTDHYLNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKLEIAHRHLIPKQLEQHGLTPQQIQIPQDTTLAIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKETKPDRSEVTEGGECREHIAEDAKPDSISDTADLALPPEMPILIDFHALKDILGPPMYELEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDIMKESAHLAISWLRSNAKKYHLTNASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRIIIPQRNEKDLEEIAVNVRQDLNFVMTSCLDEVLNAAFEGGFSAKTRLDHFNSKL
SIO_010081: lonp2
subclass of: SO_0000673
so part of: lonp2
location: complement(join(2582784..2583005,2584695..2584885,2586009..2586216,2587467..2587609,2593797..2593930,2595990..2596116,2596905..2597055,2607059..2607200,2618881..2619139,2619736..2619830,2620234..2620397,2621215..2621337,2623911..2624042,2626895..2627129,2630944..2631176))
location: region:2582784-2631176:-1
so has part: feature:2630944-2631176:-1:exon
so has part: feature:2626895-2627129:-1:exon
so has part: feature:2623911-2624042:-1:exon
so has part: feature:2621215-2621337:-1:exon
so has part: feature:2620234-2620397:-1:exon
so has part: feature:2619736-2619830:-1:exon
so has part: feature:2618881-2619139:-1:exon
so has part: feature:2607059-2607200:-1:exon
so has part: feature:2596905-2597055:-1:exon
so has part: feature:2595990-2596116:-1:exon
so has part: feature:2593797-2593930:-1:exon
so has part: feature:2587467-2587609:-1:exon
so has part: feature:2586009-2586216:-1:exon
so has part: feature:2584695-2584885:-1:exon
so has part: feature:2582784-2583005:-1:exon

XP_003222962.1
type: Protein
SIO_000068: ncbiprotein

position:2582784:-1
position: 2582784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2631176:-1
position: 2631176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2630944-2631176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2626895-2627129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2623911-2624042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2621215-2621337:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2620234-2620397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2619736-2619830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2618881-2619139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2607059-2607200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2596905-2597055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2595990-2596116:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2593797-2593930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2587467-2587609:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2586009-2586216:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2584695-2584885:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2582784-2583005:-1:exon

LOC100558155
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC100558155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2636455..2726871
location: region:2636455-2726871:1
so has part: feature:2636455-2726871:1:exon
subclass of: SO_0000010

100558155
type: Gene
SIO_000068: ncbigene

position:2636455:1
position: 2636455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2726871:1
position: 2726871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2636455-2726871:1:exon

LOC100558155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: LOC100558155
product: multidrug resistance-associated protein 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008113897.2
SIO_010081: LOC100558155
subclass of: SO_0000673
so part of: LOC100558155
location: join(2636455..2636796,2645720..2645844,2649150..2649316,2649804..2649959,2650830..2650977,2653035..2653268,2658051..2658224,2660676..2660823,2661045..2661193,2663499..2663606,2664782..2665108,2665406..2665477,2666292..2666416,2668067..2668139,2672958..2673161,2676833..2676967,2678207..2678294,2678379..2678444,2680343..2680432,2683088..2683191,2688043..2688234,2691499..2691725,2693203..2693340,2695032..2695218,2713939..2714028,2714638..2714827,2715017..2715176,2719737..2719815,2721594..2721707,2724348..2724512,2725774..2726871)
location: region:2636455-2726871:1
so has part: feature:2636455-2636796:1:exon
so has part: feature:2645720-2645844:1:exon
so has part: feature:2649150-2649316:1:exon
so has part: feature:2649804-2649959:1:exon
so has part: feature:2650830-2650977:1:exon
so has part: feature:2653035-2653268:1:exon
so has part: feature:2658051-2658224:1:exon
so has part: feature:2660676-2660823:1:exon
so has part: feature:2661045-2661193:1:exon
so has part: feature:2663499-2663606:1:exon
so has part: feature:2664782-2665108:1:exon
so has part: feature:2665406-2665477:1:exon
so has part: feature:2666292-2666416:1:exon
so has part: feature:2668067-2668139:1:exon
so has part: feature:2672958-2673161:1:exon
so has part: feature:2676833-2676967:1:exon
so has part: feature:2678207-2678294:1:exon
so has part: feature:2678379-2678444:1:exon
so has part: feature:2680343-2680432:1:exon
so has part: feature:2683088-2683191:1:exon
so has part: feature:2688043-2688234:1:exon
so has part: feature:2691499-2691725:1:exon
so has part: feature:2693203-2693340:1:exon
so has part: feature:2695032-2695218:1:exon
so has part: feature:2713939-2714028:1:exon
so has part: feature:2714638-2714827:1:exon
so has part: feature:2715017-2715176:1:exon
so has part: feature:2719737-2719815:1:exon
so has part: feature:2721594-2721707:1:exon
so has part: feature:2724348-2724512:1:exon
so has part: feature:2725774-2726871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2636455-2636796:1:exon

position:2636796:1
position: 2636796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2645720-2645844:1:exon

position:2645720:1
position: 2645720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2645844:1
position: 2645844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2649150-2649316:1:exon

position:2649150:1
position: 2649150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2649316:1
position: 2649316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2649804-2649959:1:exon

position:2649804:1
position: 2649804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2649959:1
position: 2649959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2650830-2650977:1:exon

position:2650830:1
position: 2650830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2650977:1
position: 2650977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2653035-2653268:1:exon

position:2653035:1
position: 2653035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2653268:1
position: 2653268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2658051-2658224:1:exon

position:2658051:1
position: 2658051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2658224:1
position: 2658224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2660676-2660823:1:exon

position:2660676:1
position: 2660676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2660823:1
position: 2660823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2661045-2661193:1:exon

position:2661045:1
position: 2661045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2661193:1
position: 2661193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2663499-2663606:1:exon

position:2663499:1
position: 2663499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2663606:1
position: 2663606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2664782-2665108:1:exon

position:2664782:1
position: 2664782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2665108:1
position: 2665108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2665406-2665477:1:exon

position:2665406:1
position: 2665406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2665477:1
position: 2665477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2666292-2666416:1:exon

position:2666292:1
position: 2666292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666416:1
position: 2666416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2668067-2668139:1:exon

position:2668067:1
position: 2668067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2668139:1
position: 2668139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2672958-2673161:1:exon

position:2672958:1
position: 2672958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2673161:1
position: 2673161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2676833-2676967:1:exon

position:2676833:1
position: 2676833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2676967:1
position: 2676967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2678207-2678294:1:exon

position:2678207:1
position: 2678207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2678294:1
position: 2678294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2678379-2678444:1:exon

position:2678379:1
position: 2678379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2678444:1
position: 2678444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2680343-2680432:1:exon

position:2680343:1
position: 2680343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2680432:1
position: 2680432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2683088-2683191:1:exon

position:2683088:1
position: 2683088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683191:1
position: 2683191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2688043-2688234:1:exon

position:2688043:1
position: 2688043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2688234:1
position: 2688234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2691499-2691725:1:exon

position:2691499:1
position: 2691499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2691725:1
position: 2691725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2693203-2693340:1:exon

position:2693203:1
position: 2693203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693340:1
position: 2693340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2695032-2695218:1:exon

position:2695032:1
position: 2695032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2695218:1
position: 2695218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2713939-2714028:1:exon

position:2713939:1
position: 2713939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2714028:1
position: 2714028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2714638-2714827:1:exon

position:2714638:1
position: 2714638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2714827:1
position: 2714827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2715017-2715176:1:exon

position:2715017:1
position: 2715017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2715176:1
position: 2715176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2719737-2719815:1:exon

position:2719737:1
position: 2719737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2719815:1
position: 2719815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2721594-2721707:1:exon

position:2721594:1
position: 2721594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2721707:1
position: 2721707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2724348-2724512:1:exon

position:2724348:1
position: 2724348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724512:1
position: 2724512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2725774-2726871:1:exon

position:2725774:1
position: 2725774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100558155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: LOC100558155
product: multidrug resistance-associated protein 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008113898.2
SIO_010081: LOC100558155
subclass of: SO_0000673
so part of: LOC100558155
location: join(2636455..2636796,2645720..2645844,2649150..2649316,2649804..2649959,2650830..2650977,2653035..2653268,2658051..2658224,2660676..2660823,2661045..2661193,2663499..2663606,2664782..2665108,2665406..2665477,2666292..2666416,2668067..2668139,2672958..2673161,2676833..2676967,2678207..2678294,2678379..2678444,2680343..2680432,2683088..2683191,2688043..2688234,2691499..2691725,2693203..2693340,2695032..2695218,2713939..2714028,2714638..2714827,2715017..2715166,2719737..2719815,2721594..2721679)
location: region:2636455-2721679:1
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position:2721679:1
position: 2721679
reference: sequence
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urn:…
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position:2715166:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
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urn:…
SIO_000300: 29
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LOC100558155
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 28377
gene: LOC100558155
product: multidrug resistance-associated protein 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_506710.2
SIO_010081: LOC100558155
so part of: LOC100558155
location: join(2636455..2636796,2645720..2645844,2649150..2649316,2649804..2649959,2650830..2650977,2653035..2653268,2658051..2658224,2660676..2660823,2661045..2661193,2663499..2663606,2664782..2665108,2665406..2665477,2666292..2666416,2668067..2668139,2672958..2673161,2676833..2676967,2678207..2678294,2678379..2678444,2680343..2680432,2683088..2683191,2688043..2688234,2691499..2691725,2693203..2693340,2695032..2695218,2713939..2714028,2714638..2714827,2715017..2715162,2719737..2719815,2721594..2721679)
location: region:2636455-2721679:1
so has part: feature:2636455-2636796:1:exon
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urn:…
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urn:…
SIO_000300: 27
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position:2715162:1
position: 2715162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
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urn:…
SIO_000300: 29
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LOC100558155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: LOC100558155
product: multidrug resistance-associated protein 9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016994756.1
SIO_010081: LOC100558155
subclass of: SO_0000673
so part of: LOC100558155
location: join(2636455..2636796,2645720..2645844,2649150..2649316,2649804..2649959,2650830..2650977,2653035..2653268,2658051..2658224,2660676..2660823,2661045..2661193,2663499..2663606,2664782..2665108,2665406..2665477,2666292..2666416,2668067..2668139,2672958..2673161,2676833..2676967,2678207..2678294,2678379..2678444,2680343..2680432,2683088..2683191,2688043..2688234,2691499..2691725,2693203..2693340,2695032..2695218,2713939..2714028,2714638..2714827,2715017..2715162,2719737..2719846)
location: region:2636455-2719846:1
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so has part: feature:2719737-2719846:1:exon

position:2719846:1
position: 2719846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
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LOC100558155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: LOC100558155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multidrug resistance-associated protein 9 isoform X1
translation: MKMSRRKISFVSSHTKNEDDEIKYKETNEVTGLTYRQLEDTDEPWYQTGSVAAPEHYLRPPDFDQDDGQRTFCQKYSPSLKNMIPLRPRARSSANPVDDAGLISFATFSWLSSLMLRGYRKSIDVASLPPLSDHDSSEPNARRFRLLWEAELAKVGPEKASLVRVVLRFQRTRILVDVIANIACMIFGALGPTVLIYNILQYSESGSRDLVRGIGLCVALFLTELFKVLFWALAWAVNYRTAIRLKVAVSTVAFEKLLAFKSMSHISFGEVINLLANDGYRMFEAALFCPLPIAVPLLMLACSVYSCIILGPTALIGTLVYIVCIPIQMSMAKLTSVFRRAAILVTDKRVRIMNEILTCIKLIKMYAWEKSFAKAVRGIRRAETKLLEKAGYVQSVNSALTPIVSTLSIVMTFFIHTLLNLELTASVAFSVIAMFNVMKFVIAILPFSVKAAAEAAVSLKRLKKILVIQIPPAYVIPLKGSANAVVLEGATLYWGSSSRECSTKGVKGTTRSVTSANECTAKKSKETTLNGKRICKDEAVSKPAISLSQITIAGKENNGSFALRNLNFTVPKGKILGICGNVGSGKSSVITAILGQMYLQKGTVAVNGSLAYVSQQAWIFHGTVRENILFGQPYNEQRYNYAIKVCCLKSDMDILPYADMTEIGERGLNLSGGQKQRISLARAVYANRDIYLLDDPLSAVDAHVGKHIFEQCIKVALQGKTILLVTHQLQYLEFCDDIILLEDGEICESGCHTELMEAKGRYAHLIQNLHAEETTGPSNFLDSRMIPAVSGTAEEVQDKGVENPAFDMSDETSEEPKKELEVKKDAAPANQLVQEEGRQEGSVTWKTYHTYIKASGGFILWFFLILLFALMIGCSAFSNWWLSYWLEHGSGDCRAVQNTTCREGSITDNPQLHFYQLVYGMSIIGMIILSFIKGFAFTKTTLRASSTLHNTVFYKILQSPMSFFDTTPTGRVMNRFSKDMDELDVRLPFNAENFLQQFFMVVSVVTIIAIVFPYLLIAVAVLTVIFILLFQIFQNTIRELKRVENTSRSPWFSLITSSVQGLSTIHAYNKMGDYLSRFKMLNDENASHFILFNCALRWFAVRTDILMNAMTLIVALFVVLSPPSISAAEKGLALSYIIQLSGLLQVCVRTGTETEAKFTSVEQITEYITKCVPEVKEGTMVIVPPPEWPNKGEIVFKDYQMRYRENSPIVLHGINVTIRGKQKIGIVGRTGSGKSSLGSALFRLVEPTAGTIFIDGVDICTISLESLRTKLSVIPQDPVLFVGTVRYNMDPFNEHTDDQIWKALQRTFMKGTVSKLPGKLEAKVVENGENFSVGERQLLCMARALLRNSKIIILDEATASIDSETDTQIQQTIQEAFVDCTVLTIAHRINTIQDCDRVLVMDNGKVAEFGKPEELVQNPNSAFALLLAAANKVGA
SIO_010081: LOC100558155
subclass of: SO_0000673
so part of: LOC100558155
location: join(2645740..2645844,2649150..2649316,2649804..2649959,2650830..2650977,2653035..2653268,2658051..2658224,2660676..2660823,2661045..2661193,2663499..2663606,2664782..2665108,2665406..2665477,2666292..2666416,2668067..2668139,2672958..2673161,2676833..2676967,2678207..2678294,2678379..2678444,2680343..2680432,2683088..2683191,2688043..2688234,2691499..2691725,2693203..2693340,2695032..2695218,2713939..2714028,2714638..2714827,2715017..2715176,2719737..2719815,2721594..2721707,2724348..2724512,2725774..2725866)
location: region:2645740-2725866:1
so has part: feature:2645740-2645844:1:exon
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so has part: feature:2725774-2725866:1:exon

XP_008112104.1
type: Protein
SIO_000068: ncbiprotein

position:2645740:1
position: 2645740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2725866:1
position: 2725866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:2660676-2660823:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2661045-2661193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2663499-2663606:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2664782-2665108:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2665406-2665477:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2666292-2666416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2668067-2668139:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2672958-2673161:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2676833-2676967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2678207-2678294:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2678379-2678444:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2680343-2680432:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2683088-2683191:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2688043-2688234:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2691499-2691725:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2693203-2693340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2695032-2695218:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2713939-2714028:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2714638-2714827:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2715017-2715176:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2719737-2719815:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2721594-2721707:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2724348-2724512:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725774-2725866:1:exon

LOC100558155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: LOC100558155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multidrug resistance-associated protein 9 isoform X2
translation: MKMSRRKISFVSSHTKNEDDEIKYKETNEVTGLTYRQLEDTDEPWYQTGSVAAPEHYLRPPDFDQDDGQRTFCQKYSPSLKNMIPLRPRARSSANPVDDAGLISFATFSWLSSLMLRGYRKSIDVASLPPLSDHDSSEPNARRFRLLWEAELAKVGPEKASLVRVVLRFQRTRILVDVIANIACMIFGALGPTVLIYNILQYSESGSRDLVRGIGLCVALFLTELFKVLFWALAWAVNYRTAIRLKVAVSTVAFEKLLAFKSMSHISFGEVINLLANDGYRMFEAALFCPLPIAVPLLMLACSVYSCIILGPTALIGTLVYIVCIPIQMSMAKLTSVFRRAAILVTDKRVRIMNEILTCIKLIKMYAWEKSFAKAVRGIRRAETKLLEKAGYVQSVNSALTPIVSTLSIVMTFFIHTLLNLELTASVAFSVIAMFNVMKFVIAILPFSVKAAAEAAVSLKRLKKILVIQIPPAYVIPLKGSANAVVLEGATLYWGSSSRECSTKGVKGTTRSVTSANECTAKKSKETTLNGKRICKDEAVSKPAISLSQITIAGKENNGSFALRNLNFTVPKGKILGICGNVGSGKSSVITAILGQMYLQKGTVAVNGSLAYVSQQAWIFHGTVRENILFGQPYNEQRYNYAIKVCCLKSDMDILPYADMTEIGERGLNLSGGQKQRISLARAVYANRDIYLLDDPLSAVDAHVGKHIFEQCIKVALQGKTILLVTHQLQYLEFCDDIILLEDGEICESGCHTELMEAKGRYAHLIQNLHAEETTGPSNFLDSRMIPAVSGTAEEVQDKGVENPAFDMSDETSEEPKKELEVKKDAAPANQLVQEEGRQEGSVTWKTYHTYIKASGGFILWFFLILLFALMIGCSAFSNWWLSYWLEHGSGDCRAVQNTTCREGSITDNPQLHFYQLVYGMSIIGMIILSFIKGFAFTKTTLRASSTLHNTVFYKILQSPMSFFDTTPTGRVMNRFSKDMDELDVRLPFNAENFLQQFFMVVSVVTIIAIVFPYLLIAVAVLTVIFILLFQIFQNTIRELKRVENTSRSPWFSLITSSVQGLSTIHAYNKMGDYLSRFKMLNDENASHFILFNCALRWFAVRTDILMNAMTLIVALFVVLSPPSISAAEKGLALSYIIQLSGLLQVCVRTGTETEAKFTSVEQITEYITKCVPEVKEGTMVIVPPPEWPNKGEIVFKDYQMRYRENSPIVLHGINVTIRGKQKIGIVGRTGSGKSSLGSALFRLVEPTAGTIFIDGVDICTISLESLRTKLSVIPQDPVLFVGTTWILLMNTQMIRSGKLCKELL
SIO_010081: LOC100558155
subclass of: SO_0000673
so part of: LOC100558155
location: join(2645740..2645844,2649150..2649316,2649804..2649959,2650830..2650977,2653035..2653268,2658051..2658224,2660676..2660823,2661045..2661193,2663499..2663606,2664782..2665108,2665406..2665477,2666292..2666416,2668067..2668139,2672958..2673161,2676833..2676967,2678207..2678294,2678379..2678444,2680343..2680432,2683088..2683191,2688043..2688234,2691499..2691725,2693203..2693340,2695032..2695218,2713939..2714028,2714638..2714827,2715017..2715166,2719737..2719807)
location: region:2645740-2719807:1
so has part: feature:2645740-2645844:1:exon
so has part: feature:2649150-2649316:1:exon
so has part: feature:2649804-2649959:1:exon
so has part: feature:2650830-2650977:1:exon
so has part: feature:2653035-2653268:1:exon
so has part: feature:2658051-2658224:1:exon
so has part: feature:2660676-2660823:1:exon
so has part: feature:2661045-2661193:1:exon
so has part: feature:2663499-2663606:1:exon
so has part: feature:2664782-2665108:1:exon
so has part: feature:2665406-2665477:1:exon
so has part: feature:2666292-2666416:1:exon
so has part: feature:2668067-2668139:1:exon
so has part: feature:2672958-2673161:1:exon
so has part: feature:2676833-2676967:1:exon
so has part: feature:2678207-2678294:1:exon
so has part: feature:2678379-2678444:1:exon
so has part: feature:2680343-2680432:1:exon
so has part: feature:2683088-2683191:1:exon
so has part: feature:2688043-2688234:1:exon
so has part: feature:2691499-2691725:1:exon
so has part: feature:2693203-2693340:1:exon
so has part: feature:2695032-2695218:1:exon
so has part: feature:2713939-2714028:1:exon
so has part: feature:2714638-2714827:1:exon
so has part: feature:2715017-2715166:1:exon
so has part: feature:2719737-2719807:1:exon

XP_008112105.1
type: Protein
SIO_000068: ncbiprotein

position:2719807:1
position: 2719807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2645740-2645844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2649150-2649316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2649804-2649959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650830-2650977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2653035-2653268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2658051-2658224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2660676-2660823:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2661045-2661193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2663499-2663606:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2664782-2665108:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2665406-2665477:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2666292-2666416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2668067-2668139:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2672958-2673161:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2676833-2676967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2678207-2678294:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2678379-2678444:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2680343-2680432:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2683088-2683191:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2688043-2688234:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2691499-2691725:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2693203-2693340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2695032-2695218:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2713939-2714028:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2714638-2714827:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2715017-2715166:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2719737-2719807:1:exon

LOC100558155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: LOC100558155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multidrug resistance-associated protein 9 isoform X3
translation: MKMSRRKISFVSSHTKNEDDEIKYKETNEVTGLTYRQLEDTDEPWYQTGSVAAPEHYLRPPDFDQDDGQRTFCQKYSPSLKNMIPLRPRARSSANPVDDAGLISFATFSWLSSLMLRGYRKSIDVASLPPLSDHDSSEPNARRFRLLWEAELAKVGPEKASLVRVVLRFQRTRILVDVIANIACMIFGALGPTVLIYNILQYSESGSRDLVRGIGLCVALFLTELFKVLFWALAWAVNYRTAIRLKVAVSTVAFEKLLAFKSMSHISFGEVINLLANDGYRMFEAALFCPLPIAVPLLMLACSVYSCIILGPTALIGTLVYIVCIPIQMSMAKLTSVFRRAAILVTDKRVRIMNEILTCIKLIKMYAWEKSFAKAVRGIRRAETKLLEKAGYVQSVNSALTPIVSTLSIVMTFFIHTLLNLELTASVAFSVIAMFNVMKFVIAILPFSVKAAAEAAVSLKRLKKILVIQIPPAYVIPLKGSANAVVLEGATLYWGSSSRECSTKGVKGTTRSVTSANECTAKKSKETTLNGKRICKDEAVSKPAISLSQITIAGKENNGSFALRNLNFTVPKGKILGICGNVGSGKSSVITAILGQMYLQKGTVAVNGSLAYVSQQAWIFHGTVRENILFGQPYNEQRYNYAIKVCCLKSDMDILPYADMTEIGERGLNLSGGQKQRISLARAVYANRDIYLLDDPLSAVDAHVGKHIFEQCIKVALQGKTILLVTHQLQYLEFCDDIILLEDGEICESGCHTELMEAKGRYAHLIQNLHAEETTGPSNFLDSRMIPAVSGTAEEVQDKGVENPAFDMSDETSEEPKKELEVKKDAAPANQLVQEEGRQEGSVTWKTYHTYIKASGGFILWFFLILLFALMIGCSAFSNWWLSYWLEHGSGDCRAVQNTTCREGSITDNPQLHFYQLVYGMSIIGMIILSFIKGFAFTKTTLRASSTLHNTVFYKILQSPMSFFDTTPTGRVMNRFSKDMDELDVRLPFNAENFLQQFFMVVSVVTIIAIVFPYLLIAVAVLTVIFILLFQIFQNTIRELKRVENTSRSPWFSLITSSVQGLSTIHAYNKMGDYLSRFKMLNDENASHFILFNCALRWFAVRTDILMNAMTLIVALFVVLSPPSISAAEKGLALSYIIQLSGLLQVCVRTGTETEAKFTSVEQITEYITKCVPEVKEGTMVIVPPPEWPNKGEIVFKDYQMRYRENSPIVLHGINVTIRGKQKIGIVGRTGSGKSSLGSALFRLVEPTAGTIFIDGVDICTISLESLRTKLSVIPQDPVLFVQHGSF
SIO_010081: LOC100558155
subclass of: SO_0000673
so part of: LOC100558155
location: join(2645740..2645844,2649150..2649316,2649804..2649959,2650830..2650977,2653035..2653268,2658051..2658224,2660676..2660823,2661045..2661193,2663499..2663606,2664782..2665108,2665406..2665477,2666292..2666416,2668067..2668139,2672958..2673161,2676833..2676967,2678207..2678294,2678379..2678444,2680343..2680432,2683088..2683191,2688043..2688234,2691499..2691725,2693203..2693340,2695032..2695218,2713939..2714028,2714638..2714827,2715017..2715162,2719737..2719757)
location: region:2645740-2719757:1
so has part: feature:2645740-2645844:1:exon
so has part: feature:2649150-2649316:1:exon
so has part: feature:2649804-2649959:1:exon
so has part: feature:2650830-2650977:1:exon
so has part: feature:2653035-2653268:1:exon
so has part: feature:2658051-2658224:1:exon
so has part: feature:2660676-2660823:1:exon
so has part: feature:2661045-2661193:1:exon
so has part: feature:2663499-2663606:1:exon
so has part: feature:2664782-2665108:1:exon
so has part: feature:2665406-2665477:1:exon
so has part: feature:2666292-2666416:1:exon
so has part: feature:2668067-2668139:1:exon
so has part: feature:2672958-2673161:1:exon
so has part: feature:2676833-2676967:1:exon
so has part: feature:2678207-2678294:1:exon
so has part: feature:2678379-2678444:1:exon
so has part: feature:2680343-2680432:1:exon
so has part: feature:2683088-2683191:1:exon
so has part: feature:2688043-2688234:1:exon
so has part: feature:2691499-2691725:1:exon
so has part: feature:2693203-2693340:1:exon
so has part: feature:2695032-2695218:1:exon
so has part: feature:2713939-2714028:1:exon
so has part: feature:2714638-2714827:1:exon
so has part: feature:2715017-2715162:1:exon
so has part: feature:2719737-2719757:1:exon

XP_016850245.1
type: Protein
SIO_000068: ncbiprotein

position:2719757:1
position: 2719757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2645740-2645844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2649150-2649316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2649804-2649959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650830-2650977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2653035-2653268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2658051-2658224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2660676-2660823:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2661045-2661193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2663499-2663606:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2664782-2665108:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2665406-2665477:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2666292-2666416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2668067-2668139:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2672958-2673161:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2676833-2676967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2678207-2678294:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2678379-2678444:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2680343-2680432:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2683088-2683191:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2688043-2688234:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2691499-2691725:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2693203-2693340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2695032-2695218:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2713939-2714028:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2714638-2714827:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2715017-2715162:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2719737-2719757:1:exon

LOC103279337
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC103279337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2833118..2859374
location: region:2833118-2859374:1
so has part: feature:2833118-2859374:1:exon
subclass of: SO_0000011

103279337
type: Gene
SIO_000068: ncbigene

position:2833118:1
position: 2833118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859374:1
position: 2859374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2833118-2859374:1:exon

LOC103279337
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 28377
nc RNA class: lncRNA
gene: LOC103279337
product: uncharacterized LOC103279337
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_506711.2
SIO_010081: LOC103279337
subclass of: SO_0000673
so part of: LOC103279337
location: join(2833118..2833229,2858628..2858740,2859290..2859374)
location: region:2833118-2859374:1
so has part: feature:2833118-2833229:1:exon
so has part: feature:2858628-2858740:1:exon
so has part: feature:2859290-2859374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2833118-2833229:1:exon

position:2833229:1
position: 2833229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2858628-2858740:1:exon

position:2858628:1
position: 2858628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858740:1
position: 2858740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2859290-2859374:1:exon

position:2859290:1
position: 2859290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

phkb
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: phkb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2958250..3153349)
location: region:2958250-3153349:-1
so has part: feature:2958250-3153349:-1:exon
subclass of: SO_0000010

100556200
type: Gene
SIO_000068: ncbigene

position:2958250:-1
position: 2958250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3153349:-1
position: 3153349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2958250-3153349:-1:exon

phkb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: phkb
product: phosphorylase kinase regulatory subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008113900.2
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958250..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2994965..2995055,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3153202..3153349))
location: region:2958250-3153349:-1
so has part: feature:3153202-3153349:-1:exon
so has part: feature:3138759-3138845:-1:exon
so has part: feature:3136384-3136522:-1:exon
so has part: feature:3115590-3115689:-1:exon
so has part: feature:3107941-3108048:-1:exon
so has part: feature:3105551-3105631:-1:exon
so has part: feature:3100510-3100625:-1:exon
so has part: feature:3080904-3080967:-1:exon
so has part: feature:3073817-3073912:-1:exon
so has part: feature:3062339-3062536:-1:exon
so has part: feature:3059560-3059617:-1:exon
so has part: feature:3044425-3044502:-1:exon
so has part: feature:3042857-3043015:-1:exon
so has part: feature:3042329-3042423:-1:exon
so has part: feature:3019514-3019569:-1:exon
so has part: feature:3018735-3018828:-1:exon
so has part: feature:3014340-3014423:-1:exon
so has part: feature:3012946-3013050:-1:exon
so has part: feature:3010459-3010541:-1:exon
so has part: feature:3010279-3010369:-1:exon
so has part: feature:3006824-3006885:-1:exon
so has part: feature:3006511-3006673:-1:exon
so has part: feature:3003704-3003785:-1:exon
so has part: feature:3001591-3001648:-1:exon
so has part: feature:2994965-2995055:-1:exon
so has part: feature:2990717-2990919:-1:exon
so has part: feature:2977835-2977969:-1:exon
so has part: feature:2971602-2971731:-1:exon
so has part: feature:2968586-2968693:-1:exon
so has part: feature:2967626-2967766:-1:exon
so has part: feature:2958250-2959054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3153202-3153349:-1:exon

position:3153202:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:3138759-3138845:-1:exon

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urn:…
SIO_000300: 3
SIO_000628: feature:3136384-3136522:-1:exon

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position:3136522:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:3115590-3115689:-1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:3107941-3108048:-1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:3105551-3105631:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:3100510-3100625:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:3080904-3080967:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:3073817-3073912:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:3062339-3062536:-1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:3059560-3059617:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:3044425-3044502:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:3042857-3043015:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:3042329-3042423:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:3019514-3019569:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:3018735-3018828:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:3014340-3014423:-1:exon

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SIO_000300: 18
SIO_000628: feature:3012946-3013050:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:3010459-3010541:-1:exon

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SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:3006511-3006673:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:3003704-3003785:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:3001591-3001648:-1:exon

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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:2990717-2990919:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:2977835-2977969:-1:exon

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urn:…
SIO_000300: 28
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urn:…
SIO_000300: 29
SIO_000628: feature:2968586-2968693:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:2967626-2967766:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:2958250-2959054:-1:exon

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reference: sequence
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phkb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: phkb
product: phosphorylase kinase regulatory subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_008113904.2
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958250..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2997763..2997853,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3153202..3153349))
location: region:2958250-3153349:-1
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so has part: feature:3107941-3108048:-1:exon
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so has part: feature:3100510-3100625:-1:exon
so has part: feature:3080904-3080967:-1:exon
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so has part: feature:3010279-3010369:-1:exon
so has part: feature:3006824-3006885:-1:exon
so has part: feature:3006511-3006673:-1:exon
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so has part: feature:3001591-3001648:-1:exon
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so has part: feature:2971602-2971731:-1:exon
so has part: feature:2968586-2968693:-1:exon
so has part: feature:2967626-2967766:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:3153202-3153349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3138759-3138845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136384-3136522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3115590-3115689:-1:exon

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SIO_000300: 5
SIO_000628: feature:3107941-3108048:-1:exon

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SIO_000300: 6
SIO_000628: feature:3105551-3105631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3100510-3100625:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3080904-3080967:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3073817-3073912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3062339-3062536:-1:exon

urn:…
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SIO_000628: feature:3059560-3059617:-1:exon

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SIO_000300: 12
SIO_000628: feature:3044425-3044502:-1:exon

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SIO_000300: 13
SIO_000628: feature:3042857-3043015:-1:exon

urn:…
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SIO_000628: feature:3042329-3042423:-1:exon

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SIO_000628: feature:3019514-3019569:-1:exon

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SIO_000300: 16
SIO_000628: feature:3018735-3018828:-1:exon

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SIO_000300: 17
SIO_000628: feature:3014340-3014423:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3012946-3013050:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010459-3010541:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010279-3010369:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3006824-3006885:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3006511-3006673:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3003704-3003785:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3001591-3001648:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2997763-2997853:-1:exon

position:2997763:-1
position: 2997763
reference: sequence
type: ReverseStrandPosition
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position:2997853:-1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:2990717-2990919:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2977835-2977969:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2971602-2971731:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2968586-2968693:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2967626-2967766:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2958250-2959054:-1:exon

phkb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: phkb
product: phosphorylase kinase regulatory subunit beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016994758.1
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958250..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2994965..2995055,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3143061..3143075,3146981..3147070,3153202..3153321))
location: region:2958250-3153321:-1
so has part: feature:3153202-3153321:-1:exon
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so has part: feature:3138759-3138845:-1:exon
so has part: feature:3136384-3136522:-1:exon
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so has part: feature:3073817-3073912:-1:exon
so has part: feature:3062339-3062536:-1:exon
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so has part: feature:3044425-3044502:-1:exon
so has part: feature:3042857-3043015:-1:exon
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so has part: feature:2967626-2967766:-1:exon
so has part: feature:2958250-2959054:-1:exon

position:3153321:-1
position: 3153321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3153202-3153321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3146981-3147070:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:3143061-3143075:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:3143075:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3138759-3138845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3136384-3136522:-1:exon

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SIO_000628: feature:3115590-3115689:-1:exon

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SIO_000628: feature:3107941-3108048:-1:exon

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SIO_000628: feature:3105551-3105631:-1:exon

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SIO_000628: feature:3100510-3100625:-1:exon

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SIO_000300: 10
SIO_000628: feature:3080904-3080967:-1:exon

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SIO_000300: 11
SIO_000628: feature:3073817-3073912:-1:exon

urn:…
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SIO_000628: feature:3062339-3062536:-1:exon

urn:…
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SIO_000628: feature:3059560-3059617:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3044425-3044502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3042857-3043015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3042329-3042423:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3019514-3019569:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3018735-3018828:-1:exon

urn:…
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SIO_000628: feature:3014340-3014423:-1:exon

urn:…
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SIO_000628: feature:3012946-3013050:-1:exon

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SIO_000628: feature:3010459-3010541:-1:exon

urn:…
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SIO_000628: feature:3010279-3010369:-1:exon

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SIO_000628: feature:3006824-3006885:-1:exon

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SIO_000628: feature:3006511-3006673:-1:exon

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SIO_000300: 25
SIO_000628: feature:3003704-3003785:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3001591-3001648:-1:exon

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SIO_000300: 27
SIO_000628: feature:2994965-2995055:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2990717-2990919:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2977835-2977969:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2971602-2971731:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2968586-2968693:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2967626-2967766:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2958250-2959054:-1:exon

phkb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: phkb
product: phosphorylase kinase regulatory subunit beta, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_003222915.3
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958250..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2994965..2995055,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3146981..3147075,3153202..3153321))
location: region:2958250-3153321:-1
so has part: feature:3153202-3153321:-1:exon
so has part: feature:3146981-3147075:-1:exon
so has part: feature:3138759-3138845:-1:exon
so has part: feature:3136384-3136522:-1:exon
so has part: feature:3115590-3115689:-1:exon
so has part: feature:3107941-3108048:-1:exon
so has part: feature:3105551-3105631:-1:exon
so has part: feature:3100510-3100625:-1:exon
so has part: feature:3080904-3080967:-1:exon
so has part: feature:3073817-3073912:-1:exon
so has part: feature:3062339-3062536:-1:exon
so has part: feature:3059560-3059617:-1:exon
so has part: feature:3044425-3044502:-1:exon
so has part: feature:3042857-3043015:-1:exon
so has part: feature:3042329-3042423:-1:exon
so has part: feature:3019514-3019569:-1:exon
so has part: feature:3018735-3018828:-1:exon
so has part: feature:3014340-3014423:-1:exon
so has part: feature:3012946-3013050:-1:exon
so has part: feature:3010459-3010541:-1:exon
so has part: feature:3010279-3010369:-1:exon
so has part: feature:3006824-3006885:-1:exon
so has part: feature:3006511-3006673:-1:exon
so has part: feature:3003704-3003785:-1:exon
so has part: feature:3001591-3001648:-1:exon
so has part: feature:2994965-2995055:-1:exon
so has part: feature:2990717-2990919:-1:exon
so has part: feature:2977835-2977969:-1:exon
so has part: feature:2971602-2971731:-1:exon
so has part: feature:2968586-2968693:-1:exon
so has part: feature:2967626-2967766:-1:exon
so has part: feature:2958250-2959054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3153202-3153321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3146981-3147075:-1:exon

position:3147075:-1
position: 3147075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3138759-3138845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136384-3136522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3115590-3115689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3107941-3108048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3105551-3105631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3100510-3100625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3080904-3080967:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3073817-3073912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3062339-3062536:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3059560-3059617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3044425-3044502:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3042857-3043015:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3042329-3042423:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3019514-3019569:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3018735-3018828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3014340-3014423:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3012946-3013050:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010459-3010541:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3010279-3010369:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3006824-3006885:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3006511-3006673:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3003704-3003785:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3001591-3001648:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2994965-2995055:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2990717-2990919:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2977835-2977969:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2971602-2971731:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2968586-2968693:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2967626-2967766:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2958250-2959054:-1:exon

phkb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: phkb
product: phosphorylase kinase regulatory subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016994757.1
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958250..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2994965..2995055,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3143061..3143075,3146981..3147075,3153202..3153321))
location: region:2958250-3153321:-1
so has part: feature:3153202-3153321:-1:exon
so has part: feature:3146981-3147075:-1:exon
so has part: feature:3143061-3143075:-1:exon
so has part: feature:3138759-3138845:-1:exon
so has part: feature:3136384-3136522:-1:exon
so has part: feature:3115590-3115689:-1:exon
so has part: feature:3107941-3108048:-1:exon
so has part: feature:3105551-3105631:-1:exon
so has part: feature:3100510-3100625:-1:exon
so has part: feature:3080904-3080967:-1:exon
so has part: feature:3073817-3073912:-1:exon
so has part: feature:3062339-3062536:-1:exon
so has part: feature:3059560-3059617:-1:exon
so has part: feature:3044425-3044502:-1:exon
so has part: feature:3042857-3043015:-1:exon
so has part: feature:3042329-3042423:-1:exon
so has part: feature:3019514-3019569:-1:exon
so has part: feature:3018735-3018828:-1:exon
so has part: feature:3014340-3014423:-1:exon
so has part: feature:3012946-3013050:-1:exon
so has part: feature:3010459-3010541:-1:exon
so has part: feature:3010279-3010369:-1:exon
so has part: feature:3006824-3006885:-1:exon
so has part: feature:3006511-3006673:-1:exon
so has part: feature:3003704-3003785:-1:exon
so has part: feature:3001591-3001648:-1:exon
so has part: feature:2994965-2995055:-1:exon
so has part: feature:2990717-2990919:-1:exon
so has part: feature:2977835-2977969:-1:exon
so has part: feature:2971602-2971731:-1:exon
so has part: feature:2968586-2968693:-1:exon
so has part: feature:2967626-2967766:-1:exon
so has part: feature:2958250-2959054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3153202-3153321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3146981-3147075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143061-3143075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3138759-3138845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3136384-3136522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3115590-3115689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3107941-3108048:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3105551-3105631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3100510-3100625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3080904-3080967:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3073817-3073912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3062339-3062536:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3059560-3059617:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3044425-3044502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3042857-3043015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3042329-3042423:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3019514-3019569:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3018735-3018828:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3014340-3014423:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3012946-3013050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3010459-3010541:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3010279-3010369:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3006824-3006885:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3006511-3006673:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3003704-3003785:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3001591-3001648:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2994965-2995055:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2990717-2990919:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2977835-2977969:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2971602-2971731:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2968586-2968693:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2967626-2967766:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2958250-2959054:-1:exon

phkb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: phkb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphorylase b kinase regulatory subunit beta isoform X1
translation: MLCGWTEQRGNGVDLKETFEDLFPAMASSLADVSWKMLELRARSKRSGSVYEPLKSINLPRDGESLWDRLDHYYRIVKSTVLLFQSPTTGLFPTKTFGENQKAKVHDSLYCAAAAWALALAYRRIDDDKGRTHELEHSAIKCMRGILYCYMRQADKVQQYKQDPKPSKCLHSVFSAHTGDEAFSHKEYGHLQINAVSLFLLYLVEMISSGLQIIYNTDEVSFIQNLVFCVERAYRVPDFGVWERGSKYNNGSTELHSSSVGLAKAALEAINGFNLFGNQGCSWSVIFVDLDAHNRNRQTLCSLLPRESRSHNTDAALLPCISYPAFAVDDEALYSQTIDKVVRKLKGKYGFKRFLRDGYRTALEDKNRQYYKPAEIKLFDGIECEFPLFFIFMMIDGVFRGNTEQVKEYQELLDPILQQSAEGYPVVPKYYYVPADFVELEKKNPGSQKRFPSNHGRDGKFFLWGQSLYIIAKLLADGLVSIKDIDPVKRYIPPQDQRNVSMRYSNQGPLENDLVVHVALIAESQRLQVFLNTYGIQTQTPQQVEPIQIWAQQELVKAYFHLGINDKLGLSGRPDRPIGCLGTSKIYRILGKTVVCYPIIFDLSDFYMSQDVMMLIDDIKNTLQFIKQYWKMHGRPLFLVLIREDNIRGSRFNPILDMLADFRKGVVGGVKVHVDRLQTLISDAVVDQLDFLRITETEEPPEFKSFEELDLPKHSKVKRQTSTPNVTELEQQPDINANDWKNRPTYEILQKLNDCNCLASQAILLNILLKREGPHFITKEGTVSDHIERIYRKAGSKKLWSVVRFAASHLCKLVDSLAPSITNVLVQGKQVTLGAFGQEEEIISNPVSPGAIKDIIYNKCNLQDEREAVLQQELVIHIGWIISNSPELFNGMLKIRVGWIVHAMKYELQIRAGEMPPMDLYQLSPSEVKQLLLDILQPQQQGRCWLNRRQIDGSLNRTPSGFYDRVWQILERTPNGLIVAGNFLPQQPTLSDMTMYEMNFSLLVEDMLKNIDQPEYRQIIVELLMVVSLILERNPELEFQDKVDLDKLMKEAFHDFQKDQSLLKGTEKQDDMTSFYNTPPLGKRGTCSYLTKVVMNLLLEGEVKPTADDPCSIS
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958917..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2994965..2995055,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3153202..3153343))
location: region:2958917-3153343:-1
so has part: feature:3153202-3153343:-1:exon
so has part: feature:3138759-3138845:-1:exon
so has part: feature:3136384-3136522:-1:exon
so has part: feature:3115590-3115689:-1:exon
so has part: feature:3107941-3108048:-1:exon
so has part: feature:3105551-3105631:-1:exon
so has part: feature:3100510-3100625:-1:exon
so has part: feature:3080904-3080967:-1:exon
so has part: feature:3073817-3073912:-1:exon
so has part: feature:3062339-3062536:-1:exon
so has part: feature:3059560-3059617:-1:exon
so has part: feature:3044425-3044502:-1:exon
so has part: feature:3042857-3043015:-1:exon
so has part: feature:3042329-3042423:-1:exon
so has part: feature:3019514-3019569:-1:exon
so has part: feature:3018735-3018828:-1:exon
so has part: feature:3014340-3014423:-1:exon
so has part: feature:3012946-3013050:-1:exon
so has part: feature:3010459-3010541:-1:exon
so has part: feature:3010279-3010369:-1:exon
so has part: feature:3006824-3006885:-1:exon
so has part: feature:3006511-3006673:-1:exon
so has part: feature:3003704-3003785:-1:exon
so has part: feature:3001591-3001648:-1:exon
so has part: feature:2994965-2995055:-1:exon
so has part: feature:2990717-2990919:-1:exon
so has part: feature:2977835-2977969:-1:exon
so has part: feature:2971602-2971731:-1:exon
so has part: feature:2968586-2968693:-1:exon
so has part: feature:2967626-2967766:-1:exon
so has part: feature:2958917-2959054:-1:exon

XP_008112107.1
type: Protein
SIO_000068: ncbiprotein

position:2958917:-1
position: 2958917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3153343:-1
position: 3153343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3153202-3153343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3138759-3138845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136384-3136522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3115590-3115689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3107941-3108048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105551-3105631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3100510-3100625:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3080904-3080967:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3073817-3073912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3062339-3062536:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3059560-3059617:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3044425-3044502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3042857-3043015:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3042329-3042423:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3019514-3019569:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3018735-3018828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3014340-3014423:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3012946-3013050:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010459-3010541:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010279-3010369:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3006824-3006885:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3006511-3006673:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3003704-3003785:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3001591-3001648:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2994965-2995055:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2990717-2990919:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2977835-2977969:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2971602-2971731:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2968586-2968693:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2967626-2967766:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2958917-2959054:-1:exon

phkb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: phkb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphorylase b kinase regulatory subunit beta isoform X2
translation: MLCGWTEQRGNGVDLKETFEDLFPAMASSLADVSWKMLELRARSKRSGSVYEPLKSINLPRDGESLWDRLDHYYRIVKSTVLLFQSPTTGLFPTKTFGENQKAKVHDSLYCAAAAWALALAYRRIDDDKGRTHELEHSAIKCMRGILYCYMRQADKVQQYKQDPKPSKCLHSVFSAHTGDEAFSHKEYGHLQINAVSLFLLYLVEMISSGLQIIYNTDEVSFIQNLVFCVERAYRVPDFGVWERGSKYNNGSTELHSSSVGLAKAALEAINGFNLFGNQGCSWSVIFVDLDAHNRNRQTLCSLLPRESRSHNTDAALLPCISYPAFAVDDEALYSQTIDKVVRKLKGKYGFKRFLRDGYRTALEDKNRQYYKPAEIKLFDGIECEFPLFFIFMMIDGVFRGNTEQVKEYQELLDPILQQSAEGYPVVPKYYYVPADFVELEKKNPGSQKRFPSNHGRDGKFFLWGQSLYIIAKLLADGLVSIKDIDPVKRYIPPQDQRNVSMRYSNQGPLENDLVVHVALIAESQRLQVFLNTYGIQTQTPQQVEPIQIWAQQELVKAYFHLGINDKLGLSGRPDRPIGCLGTSKIYRILGKTVVCYPIIFDLSDFYMSQDVMMLIDDIKNTLQFIKQYWKMHGRPLFLVLIREDNIRGSRFNPILDMLADFRKGVVGGVKVHVDRLQTLISDAVVDQLDFLRITETEEPPEFKSFEELDLPKHSKVKRQTSTPNVTELEQQPDINANDWKNRPTYEILQKLNDCNCLASQAILLNILLKREGPHFITKEGTVSDHIERIYRKAGSKKLWLVLRCSAACIQKLAASLAPHITTVVVHGKQVTLGAFGQEEEIISNPVSPGAIKDIIYNKCNLQDEREAVLQQELVIHIGWIISNSPELFNGMLKIRVGWIVHAMKYELQIRAGEMPPMDLYQLSPSEVKQLLLDILQPQQQGRCWLNRRQIDGSLNRTPSGFYDRVWQILERTPNGLIVAGNFLPQQPTLSDMTMYEMNFSLLVEDMLKNIDQPEYRQIIVELLMVVSLILERNPELEFQDKVDLDKLMKEAFHDFQKDQSLLKGTEKQDDMTSFYNTPPLGKRGTCSYLTKVVMNLLLEGEVKPTADDPCSIS
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958917..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2997763..2997853,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3153202..3153343))
location: region:2958917-3153343:-1
so has part: feature:3153202-3153343:-1:exon
so has part: feature:3138759-3138845:-1:exon
so has part: feature:3136384-3136522:-1:exon
so has part: feature:3115590-3115689:-1:exon
so has part: feature:3107941-3108048:-1:exon
so has part: feature:3105551-3105631:-1:exon
so has part: feature:3100510-3100625:-1:exon
so has part: feature:3080904-3080967:-1:exon
so has part: feature:3073817-3073912:-1:exon
so has part: feature:3062339-3062536:-1:exon
so has part: feature:3059560-3059617:-1:exon
so has part: feature:3044425-3044502:-1:exon
so has part: feature:3042857-3043015:-1:exon
so has part: feature:3042329-3042423:-1:exon
so has part: feature:3019514-3019569:-1:exon
so has part: feature:3018735-3018828:-1:exon
so has part: feature:3014340-3014423:-1:exon
so has part: feature:3012946-3013050:-1:exon
so has part: feature:3010459-3010541:-1:exon
so has part: feature:3010279-3010369:-1:exon
so has part: feature:3006824-3006885:-1:exon
so has part: feature:3006511-3006673:-1:exon
so has part: feature:3003704-3003785:-1:exon
so has part: feature:3001591-3001648:-1:exon
so has part: feature:2997763-2997853:-1:exon
so has part: feature:2990717-2990919:-1:exon
so has part: feature:2977835-2977969:-1:exon
so has part: feature:2971602-2971731:-1:exon
so has part: feature:2968586-2968693:-1:exon
so has part: feature:2967626-2967766:-1:exon
so has part: feature:2958917-2959054:-1:exon

XP_008112111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3153202-3153343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3138759-3138845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136384-3136522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3115590-3115689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3107941-3108048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105551-3105631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3100510-3100625:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3080904-3080967:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3073817-3073912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3062339-3062536:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3059560-3059617:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3044425-3044502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3042857-3043015:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3042329-3042423:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3019514-3019569:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3018735-3018828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3014340-3014423:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3012946-3013050:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010459-3010541:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010279-3010369:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3006824-3006885:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3006511-3006673:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3003704-3003785:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3001591-3001648:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2997763-2997853:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2990717-2990919:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2977835-2977969:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2971602-2971731:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2968586-2968693:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2967626-2967766:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2958917-2959054:-1:exon

phkb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: phkb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphorylase b kinase regulatory subunit beta isoform X4
translation: MAGLDADRAASARAYSWFGSVYEPLKSINLPRDGESLWDRLDHYYRIVKSTVLLFQSPTTGLFPTKTFGENQKAKVHDSLYCAAAAWALALAYRRIDDDKGRTHELEHSAIKCMRGILYCYMRQADKVQQYKQDPKPSKCLHSVFSAHTGDEAFSHKEYGHLQINAVSLFLLYLVEMISSGLQIIYNTDEVSFIQNLVFCVERAYRVPDFGVWERGSKYNNGSTELHSSSVGLAKAALEAINGFNLFGNQGCSWSVIFVDLDAHNRNRQTLCSLLPRESRSHNTDAALLPCISYPAFAVDDEALYSQTIDKVVRKLKGKYGFKRFLRDGYRTALEDKNRQYYKPAEIKLFDGIECEFPLFFIFMMIDGVFRGNTEQVKEYQELLDPILQQSAEGYPVVPKYYYVPADFVELEKKNPGSQKRFPSNHGRDGKFFLWGQSLYIIAKLLADGLVSIKDIDPVKRYIPPQDQRNVSMRYSNQGPLENDLVVHVALIAESQRLQVFLNTYGIQTQTPQQVEPIQIWAQQELVKAYFHLGINDKLGLSGRPDRPIGCLGTSKIYRILGKTVVCYPIIFDLSDFYMSQDVMMLIDDIKNTLQFIKQYWKMHGRPLFLVLIREDNIRGSRFNPILDMLADFRKGVVGGVKVHVDRLQTLISDAVVDQLDFLRITETEEPPEFKSFEELDLPKHSKVKRQTSTPNVTELEQQPDINANDWKNRPTYEILQKLNDCNCLASQAILLNILLKREGPHFITKEGTVSDHIERIYRKAGSKKLWSVVRFAASHLCKLVDSLAPSITNVLVQGKQVTLGAFGQEEEIISNPVSPGAIKDIIYNKCNLQDEREAVLQQELVIHIGWIISNSPELFNGMLKIRVGWIVHAMKYELQIRAGEMPPMDLYQLSPSEVKQLLLDILQPQQQGRCWLNRRQIDGSLNRTPSGFYDRVWQILERTPNGLIVAGNFLPQQPTLSDMTMYEMNFSLLVEDMLKNIDQPEYRQIIVELLMVVSLILERNPELEFQDKVDLDKLMKEAFHDFQKDQSLLKGTEKQDDMTSFYNTPPLGKRGTCSYLTKVVMNLLLEGEVKPTADDPCSIS
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958917..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2994965..2995055,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3146981..3147035))
location: region:2958917-3147035:-1
so has part: feature:3146981-3147035:-1:exon
so has part: feature:3138759-3138845:-1:exon
so has part: feature:3136384-3136522:-1:exon
so has part: feature:3115590-3115689:-1:exon
so has part: feature:3107941-3108048:-1:exon
so has part: feature:3105551-3105631:-1:exon
so has part: feature:3100510-3100625:-1:exon
so has part: feature:3080904-3080967:-1:exon
so has part: feature:3073817-3073912:-1:exon
so has part: feature:3062339-3062536:-1:exon
so has part: feature:3059560-3059617:-1:exon
so has part: feature:3044425-3044502:-1:exon
so has part: feature:3042857-3043015:-1:exon
so has part: feature:3042329-3042423:-1:exon
so has part: feature:3019514-3019569:-1:exon
so has part: feature:3018735-3018828:-1:exon
so has part: feature:3014340-3014423:-1:exon
so has part: feature:3012946-3013050:-1:exon
so has part: feature:3010459-3010541:-1:exon
so has part: feature:3010279-3010369:-1:exon
so has part: feature:3006824-3006885:-1:exon
so has part: feature:3006511-3006673:-1:exon
so has part: feature:3003704-3003785:-1:exon
so has part: feature:3001591-3001648:-1:exon
so has part: feature:2994965-2995055:-1:exon
so has part: feature:2990717-2990919:-1:exon
so has part: feature:2977835-2977969:-1:exon
so has part: feature:2971602-2971731:-1:exon
so has part: feature:2968586-2968693:-1:exon
so has part: feature:2967626-2967766:-1:exon
so has part: feature:2958917-2959054:-1:exon

XP_003222963.1
type: Protein
SIO_000068: ncbiprotein

position:3147035:-1
position: 3147035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3146981-3147035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3138759-3138845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136384-3136522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3115590-3115689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3107941-3108048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105551-3105631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3100510-3100625:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3080904-3080967:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3073817-3073912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3062339-3062536:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3059560-3059617:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3044425-3044502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3042857-3043015:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3042329-3042423:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3019514-3019569:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3018735-3018828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3014340-3014423:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3012946-3013050:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010459-3010541:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010279-3010369:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3006824-3006885:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3006511-3006673:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3003704-3003785:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3001591-3001648:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2994965-2995055:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2990717-2990919:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2977835-2977969:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2971602-2971731:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2968586-2968693:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2967626-2967766:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2958917-2959054:-1:exon

phkb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: phkb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphorylase b kinase regulatory subunit beta isoform X3
translation: MAGLDADRAASARAYSWFDGRFPGSVYEPLKSINLPRDGESLWDRLDHYYRIVKSTVLLFQSPTTGLFPTKTFGENQKAKVHDSLYCAAAAWALALAYRRIDDDKGRTHELEHSAIKCMRGILYCYMRQADKVQQYKQDPKPSKCLHSVFSAHTGDEAFSHKEYGHLQINAVSLFLLYLVEMISSGLQIIYNTDEVSFIQNLVFCVERAYRVPDFGVWERGSKYNNGSTELHSSSVGLAKAALEAINGFNLFGNQGCSWSVIFVDLDAHNRNRQTLCSLLPRESRSHNTDAALLPCISYPAFAVDDEALYSQTIDKVVRKLKGKYGFKRFLRDGYRTALEDKNRQYYKPAEIKLFDGIECEFPLFFIFMMIDGVFRGNTEQVKEYQELLDPILQQSAEGYPVVPKYYYVPADFVELEKKNPGSQKRFPSNHGRDGKFFLWGQSLYIIAKLLADGLVSIKDIDPVKRYIPPQDQRNVSMRYSNQGPLENDLVVHVALIAESQRLQVFLNTYGIQTQTPQQVEPIQIWAQQELVKAYFHLGINDKLGLSGRPDRPIGCLGTSKIYRILGKTVVCYPIIFDLSDFYMSQDVMMLIDDIKNTLQFIKQYWKMHGRPLFLVLIREDNIRGSRFNPILDMLADFRKGVVGGVKVHVDRLQTLISDAVVDQLDFLRITETEEPPEFKSFEELDLPKHSKVKRQTSTPNVTELEQQPDINANDWKNRPTYEILQKLNDCNCLASQAILLNILLKREGPHFITKEGTVSDHIERIYRKAGSKKLWSVVRFAASHLCKLVDSLAPSITNVLVQGKQVTLGAFGQEEEIISNPVSPGAIKDIIYNKCNLQDEREAVLQQELVIHIGWIISNSPELFNGMLKIRVGWIVHAMKYELQIRAGEMPPMDLYQLSPSEVKQLLLDILQPQQQGRCWLNRRQIDGSLNRTPSGFYDRVWQILERTPNGLIVAGNFLPQQPTLSDMTMYEMNFSLLVEDMLKNIDQPEYRQIIVELLMVVSLILERNPELEFQDKVDLDKLMKEAFHDFQKDQSLLKGTEKQDDMTSFYNTPPLGKRGTCSYLTKVVMNLLLEGEVKPTADDPCSIS
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958917..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2994965..2995055,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3143061..3143075,3146981..3147035))
location: region:2958917-3147035:-1
so has part: feature:3146981-3147035:-1:exon
so has part: feature:3143061-3143075:-1:exon
so has part: feature:3138759-3138845:-1:exon
so has part: feature:3136384-3136522:-1:exon
so has part: feature:3115590-3115689:-1:exon
so has part: feature:3107941-3108048:-1:exon
so has part: feature:3105551-3105631:-1:exon
so has part: feature:3100510-3100625:-1:exon
so has part: feature:3080904-3080967:-1:exon
so has part: feature:3073817-3073912:-1:exon
so has part: feature:3062339-3062536:-1:exon
so has part: feature:3059560-3059617:-1:exon
so has part: feature:3044425-3044502:-1:exon
so has part: feature:3042857-3043015:-1:exon
so has part: feature:3042329-3042423:-1:exon
so has part: feature:3019514-3019569:-1:exon
so has part: feature:3018735-3018828:-1:exon
so has part: feature:3014340-3014423:-1:exon
so has part: feature:3012946-3013050:-1:exon
so has part: feature:3010459-3010541:-1:exon
so has part: feature:3010279-3010369:-1:exon
so has part: feature:3006824-3006885:-1:exon
so has part: feature:3006511-3006673:-1:exon
so has part: feature:3003704-3003785:-1:exon
so has part: feature:3001591-3001648:-1:exon
so has part: feature:2994965-2995055:-1:exon
so has part: feature:2990717-2990919:-1:exon
so has part: feature:2977835-2977969:-1:exon
so has part: feature:2971602-2971731:-1:exon
so has part: feature:2968586-2968693:-1:exon
so has part: feature:2967626-2967766:-1:exon
so has part: feature:2958917-2959054:-1:exon

XP_016850246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3146981-3147035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3143061-3143075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3138759-3138845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136384-3136522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3115590-3115689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3107941-3108048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3105551-3105631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3100510-3100625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3080904-3080967:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3073817-3073912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3062339-3062536:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3059560-3059617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3044425-3044502:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3042857-3043015:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3042329-3042423:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3019514-3019569:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3018735-3018828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3014340-3014423:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3012946-3013050:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010459-3010541:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3010279-3010369:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3006824-3006885:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3006511-3006673:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3003704-3003785:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3001591-3001648:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2994965-2995055:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2990717-2990919:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2977835-2977969:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2971602-2971731:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2968586-2968693:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2967626-2967766:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2958917-2959054:-1:exon

phkb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: phkb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphorylase b kinase regulatory subunit beta isoform X3
translation: MAGLDADRAASARAYSWFDGRFPGSVYEPLKSINLPRDGESLWDRLDHYYRIVKSTVLLFQSPTTGLFPTKTFGENQKAKVHDSLYCAAAAWALALAYRRIDDDKGRTHELEHSAIKCMRGILYCYMRQADKVQQYKQDPKPSKCLHSVFSAHTGDEAFSHKEYGHLQINAVSLFLLYLVEMISSGLQIIYNTDEVSFIQNLVFCVERAYRVPDFGVWERGSKYNNGSTELHSSSVGLAKAALEAINGFNLFGNQGCSWSVIFVDLDAHNRNRQTLCSLLPRESRSHNTDAALLPCISYPAFAVDDEALYSQTIDKVVRKLKGKYGFKRFLRDGYRTALEDKNRQYYKPAEIKLFDGIECEFPLFFIFMMIDGVFRGNTEQVKEYQELLDPILQQSAEGYPVVPKYYYVPADFVELEKKNPGSQKRFPSNHGRDGKFFLWGQSLYIIAKLLADGLVSIKDIDPVKRYIPPQDQRNVSMRYSNQGPLENDLVVHVALIAESQRLQVFLNTYGIQTQTPQQVEPIQIWAQQELVKAYFHLGINDKLGLSGRPDRPIGCLGTSKIYRILGKTVVCYPIIFDLSDFYMSQDVMMLIDDIKNTLQFIKQYWKMHGRPLFLVLIREDNIRGSRFNPILDMLADFRKGVVGGVKVHVDRLQTLISDAVVDQLDFLRITETEEPPEFKSFEELDLPKHSKVKRQTSTPNVTELEQQPDINANDWKNRPTYEILQKLNDCNCLASQAILLNILLKREGPHFITKEGTVSDHIERIYRKAGSKKLWSVVRFAASHLCKLVDSLAPSITNVLVQGKQVTLGAFGQEEEIISNPVSPGAIKDIIYNKCNLQDEREAVLQQELVIHIGWIISNSPELFNGMLKIRVGWIVHAMKYELQIRAGEMPPMDLYQLSPSEVKQLLLDILQPQQQGRCWLNRRQIDGSLNRTPSGFYDRVWQILERTPNGLIVAGNFLPQQPTLSDMTMYEMNFSLLVEDMLKNIDQPEYRQIIVELLMVVSLILERNPELEFQDKVDLDKLMKEAFHDFQKDQSLLKGTEKQDDMTSFYNTPPLGKRGTCSYLTKVVMNLLLEGEVKPTADDPCSIS
SIO_010081: phkb
subclass of: SO_0000673
so part of: phkb
location: complement(join(2958917..2959054,2967626..2967766,2968586..2968693,2971602..2971731,2977835..2977969,2990717..2990919,2994965..2995055,3001591..3001648,3003704..3003785,3006511..3006673,3006824..3006885,3010279..3010369,3010459..3010541,3012946..3013050,3014340..3014423,3018735..3018828,3019514..3019569,3042329..3042423,3042857..3043015,3044425..3044502,3059560..3059617,3062339..3062536,3073817..3073912,3080904..3080967,3100510..3100625,3105551..3105631,3107941..3108048,3115590..3115689,3136384..3136522,3138759..3138845,3143061..3143075,3146981..3147035))
location: region:2958917-3147035:-1
so has part: feature:3146981-3147035:-1:exon
so has part: feature:3143061-3143075:-1:exon
so has part: feature:3138759-3138845:-1:exon
so has part: feature:3136384-3136522:-1:exon
so has part: feature:3115590-3115689:-1:exon
so has part: feature:3107941-3108048:-1:exon
so has part: feature:3105551-3105631:-1:exon
so has part: feature:3100510-3100625:-1:exon
so has part: feature:3080904-3080967:-1:exon
so has part: feature:3073817-3073912:-1:exon
so has part: feature:3062339-3062536:-1:exon
so has part: feature:3059560-3059617:-1:exon
so has part: feature:3044425-3044502:-1:exon
so has part: feature:3042857-3043015:-1:exon
so has part: feature:3042329-3042423:-1:exon
so has part: feature:3019514-3019569:-1:exon
so has part: feature:3018735-3018828:-1:exon
so has part: feature:3014340-3014423:-1:exon
so has part: feature:3012946-3013050:-1:exon
so has part: feature:3010459-3010541:-1:exon
so has part: feature:3010279-3010369:-1:exon
so has part: feature:3006824-3006885:-1:exon
so has part: feature:3006511-3006673:-1:exon
so has part: feature:3003704-3003785:-1:exon
so has part: feature:3001591-3001648:-1:exon
so has part: feature:2994965-2995055:-1:exon
so has part: feature:2990717-2990919:-1:exon
so has part: feature:2977835-2977969:-1:exon
so has part: feature:2971602-2971731:-1:exon
so has part: feature:2968586-2968693:-1:exon
so has part: feature:2967626-2967766:-1:exon
so has part: feature:2958917-2959054:-1:exon

XP_016850247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3146981-3147035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3143061-3143075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3138759-3138845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136384-3136522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3115590-3115689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3107941-3108048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3105551-3105631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3100510-3100625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3080904-3080967:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3073817-3073912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3062339-3062536:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3059560-3059617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3044425-3044502:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3042857-3043015:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3042329-3042423:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3019514-3019569:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3018735-3018828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3014340-3014423:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3012946-3013050:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010459-3010541:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3010279-3010369:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3006824-3006885:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3006511-3006673:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3003704-3003785:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3001591-3001648:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2994965-2995055:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2990717-2990919:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2977835-2977969:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2971602-2971731:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2968586-2968693:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2967626-2967766:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2958917-2959054:-1:exon

itfg1
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: itfg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3153492..3331881
location: region:3153492-3331881:1
so has part: feature:3153492-3331881:1:exon
subclass of: SO_0000010

100558351
type: Gene
SIO_000068: ncbigene

position:3153492:1
position: 3153492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3331881:1
position: 3331881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3153492-3331881:1:exon

itfg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: itfg1
product: integrin alpha FG-GAP repeat containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_003222926.3
SIO_010081: itfg1
subclass of: SO_0000673
so part of: itfg1
location: join(3153492..3153674,3164796..3164868,3165312..3165451,3166539..3166596,3166838..3166921,3172544..3172638,3192338..3192399,3199542..3199641,3227771..3227865,3229726..3229898,3258667..3258817,3262672..3262780,3269236..3269279,3272790..3272868,3299657..3299781,3300232..3300314,3319959..3320076,3330836..3331881)
location: region:3153492-3331881:1
so has part: feature:3153492-3153674:1:exon
so has part: feature:3164796-3164868:1:exon
so has part: feature:3165312-3165451:1:exon
so has part: feature:3166539-3166596:1:exon
so has part: feature:3166838-3166921:1:exon
so has part: feature:3172544-3172638:1:exon
so has part: feature:3192338-3192399:1:exon
so has part: feature:3199542-3199641:1:exon
so has part: feature:3227771-3227865:1:exon
so has part: feature:3229726-3229898:1:exon
so has part: feature:3258667-3258817:1:exon
so has part: feature:3262672-3262780:1:exon
so has part: feature:3269236-3269279:1:exon
so has part: feature:3272790-3272868:1:exon
so has part: feature:3299657-3299781:1:exon
so has part: feature:3300232-3300314:1:exon
so has part: feature:3319959-3320076:1:exon
so has part: feature:3330836-3331881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3153492-3153674:1:exon

position:3153674:1
position: 3153674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3164796-3164868:1:exon

position:3164796:1
position: 3164796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3164868:1
position: 3164868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3165312-3165451:1:exon

position:3165312:1
position: 3165312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3165451:1
position: 3165451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3166539-3166596:1:exon

position:3166539:1
position: 3166539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3166596:1
position: 3166596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3166838-3166921:1:exon

position:3166838:1
position: 3166838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3166921:1
position: 3166921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3172544-3172638:1:exon

position:3172544:1
position: 3172544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3172638:1
position: 3172638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3192338-3192399:1:exon

position:3192338:1
position: 3192338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3192399:1
position: 3192399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3199542-3199641:1:exon

position:3199542:1
position: 3199542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3199641:1
position: 3199641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3227771-3227865:1:exon

position:3227771:1
position: 3227771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3227865:1
position: 3227865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3229726-3229898:1:exon

position:3229726:1
position: 3229726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3229898:1
position: 3229898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3258667-3258817:1:exon

position:3258667:1
position: 3258667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3258817:1
position: 3258817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3262672-3262780:1:exon

position:3262672:1
position: 3262672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3262780:1
position: 3262780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3269236-3269279:1:exon

position:3269236:1
position: 3269236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3269279:1
position: 3269279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3272790-3272868:1:exon

position:3272790:1
position: 3272790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3272868:1
position: 3272868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3299657-3299781:1:exon

position:3299657:1
position: 3299657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3299781:1
position: 3299781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3300232-3300314:1:exon

position:3300232:1
position: 3300232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300314:1
position: 3300314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3319959-3320076:1:exon

position:3319959:1
position: 3319959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3320076:1
position: 3320076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3330836-3331881:1:exon

position:3330836:1
position: 3330836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

itfg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: itfg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell immunomodulatory protein
translation: MGLPGLFFFLLALLRPGGALQNVTPQLFGSQASGRLAAFGDFNSDKQTDLFVLRADSELNIFLADQKEPYFKPKVKLLLRNVVITSVVPGDYDGDSQMDVLLTTHPQKQPNADLSVLIFWGNNQTLDINRKLVLNKTFHDEPLIMDFNGDLIPDVFGVTNESDKPQVLIGSNDRNLSWQPALDTENKMYAPHSHAFIDLTNDFTADLFLTTVSNDKQIQFEIWENQNGNFTKPTQKKPTYIKKKPEGAVIVGQSVFADFDGDGQTEHLLPACADAACQKSVIYLTKPGSDQWFPVLQNFTNKGTVWGFVPYNSDPSSAEFSVPITLHIGDYNMDGYPDALAILRNTSGSNQQAFLLQNVECNNASCAGAHRMFKVYWELSDLHQIKDAMVATFFDIYEDGILDILVLSNNSSKKEFTIHALKNNFEADAYFVKVIVLSGLCSNDCPHKVTPFGVNQPGPYIMYTTVDANGYLKNGSAGQLSQSAHFSLQLPYNVLGLGRSANFLDHLYVGIPRPLGETSERKQEWTAIIPNSQLIVIPYPHYLPRSWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQEKKADDREKRQEAHRFHFDAM
SIO_010081: itfg1
subclass of: SO_0000673
so part of: itfg1
location: join(3153509..3153674,3164796..3164868,3165312..3165451,3166539..3166596,3166838..3166921,3172544..3172638,3192338..3192399,3199542..3199641,3227771..3227865,3229726..3229898,3258667..3258817,3262672..3262780,3269236..3269279,3272790..3272868,3299657..3299781,3300232..3300314,3319959..3320076,3330836..3330895)
location: region:3153509-3330895:1
so has part: feature:3153509-3153674:1:exon
so has part: feature:3164796-3164868:1:exon
so has part: feature:3165312-3165451:1:exon
so has part: feature:3166539-3166596:1:exon
so has part: feature:3166838-3166921:1:exon
so has part: feature:3172544-3172638:1:exon
so has part: feature:3192338-3192399:1:exon
so has part: feature:3199542-3199641:1:exon
so has part: feature:3227771-3227865:1:exon
so has part: feature:3229726-3229898:1:exon
so has part: feature:3258667-3258817:1:exon
so has part: feature:3262672-3262780:1:exon
so has part: feature:3269236-3269279:1:exon
so has part: feature:3272790-3272868:1:exon
so has part: feature:3299657-3299781:1:exon
so has part: feature:3300232-3300314:1:exon
so has part: feature:3319959-3320076:1:exon
so has part: feature:3330836-3330895:1:exon

XP_003222974.1
type: Protein
SIO_000068: ncbiprotein

position:3153509:1
position: 3153509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3330895:1
position: 3330895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3153509-3153674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3164796-3164868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3165312-3165451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3166539-3166596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3166838-3166921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3172544-3172638:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3192338-3192399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3199542-3199641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3227771-3227865:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3229726-3229898:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3258667-3258817:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3262672-3262780:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3269236-3269279:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3272790-3272868:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3299657-3299781:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3300232-3300314:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3319959-3320076:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3330836-3330895:1:exon

neto2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: neto2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3339066..3390509
location: region:3339066-3390509:1
so has part: feature:3339066-3390509:1:exon
subclass of: SO_0000010

100558548
type: Gene
SIO_000068: ncbigene

position:3339066:1
position: 3339066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390509:1
position: 3390509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3339066-3390509:1:exon

neto2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: neto2
product: neuropilin and tolloid like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_008113906.2
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339066..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368559..3368603,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388211,3388525..3390509)
location: region:3339066-3390509:1
so has part: feature:3339066-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368559-3368603:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388211:1:exon
so has part: feature:3388525-3390509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3339066-3339425:1:exon

position:3339425:1
position: 3339425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

position:3363313:1
position: 3363313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3363369:1
position: 3363369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

position:3365102:1
position: 3365102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3365242:1
position: 3365242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

position:3366559:1
position: 3366559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3366807:1
position: 3366807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3368559-3368603:1:exon

position:3368559:1
position: 3368559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368603:1
position: 3368603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3368699-3368826:1:exon

position:3368699:1
position: 3368699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368826:1
position: 3368826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3370864-3371092:1:exon

position:3370864:1
position: 3370864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3371092:1
position: 3371092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3373639-3373752:1:exon

position:3373639:1
position: 3373639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3373752:1
position: 3373752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3387618-3388211:1:exon

position:3387618:1
position: 3387618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3388211:1
position: 3388211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3388525-3390509:1:exon

position:3388525:1
position: 3388525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

neto2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: neto2
product: neuropilin and tolloid like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008113908.2
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339066..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368559..3368603,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388211,3389223..3390509)
location: region:3339066-3390509:1
so has part: feature:3339066-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368559-3368603:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388211:1:exon
so has part: feature:3389223-3390509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3339066-3339425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368559-3368603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3368699-3368826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3370864-3371092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3373639-3373752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3387618-3388211:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3389223-3390509:1:exon

position:3389223:1
position: 3389223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

neto2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: neto2
product: neuropilin and tolloid like 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_003222927.3
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339066..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368559..3368582,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388476)
location: region:3339066-3388476:1
so has part: feature:3339066-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368559-3368582:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388476:1:exon

position:3388476:1
position: 3388476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3339066-3339425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368559-3368582:1:exon

position:3368582:1
position: 3368582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3368699-3368826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3370864-3371092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3373639-3373752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3387618-3388476:1:exon

neto2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: neto2
product: neuropilin and tolloid like 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016994759.1
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339066..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388476)
location: region:3339066-3388476:1
so has part: feature:3339066-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3339066-3339425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368699-3368826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3370864-3371092:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3373639-3373752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3387618-3388476:1:exon

neto2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: neto2
product: neuropilin and tolloid like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_008113905.2
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339067..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368559..3368603,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388476)
location: region:3339067-3388476:1
so has part: feature:3339067-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368559-3368603:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388476:1:exon

position:3339067:1
position: 3339067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3339067-3339425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368559-3368603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3368699-3368826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3370864-3371092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3373639-3373752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3387618-3388476:1:exon

neto2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: neto2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 2 isoform X1
translation: MALEQVYSVLEVFLITILVVEGIAVAQKTQVGQNTGGNRMASTQCSDWVRTSNGGHFASPNFPKFYPPNQECVYILEAAPRQRIELTFDEPYYIEPSFECRFDHLEVRDGPFGFSPLIDRYCGLKSPTLIRSTGRFMWIKFTSDEELEGEGFKAKYSFIPDPDFTYLGGILNPIPDCQFELSGADGIVRSSQVEQEEKTKPGQAVDCIWTIKATPNAKIYLRFLDYQMEHSNECKRNFVAVYDGSSSIENLKAKFCSTVANDVMLQTGTGVVRMWADEGSRLSRFRMLFTSFVDPPCSGGTYFCHSNMCINNSLVCNGIQNCAYPWDENHCKEKKKTGLFEQITKTHGTIIGITSGIVLVLLIISILVQVKQPRKKVMACKTTFNKTGFQEVFDPPHYELFSLRDKEISADLADLSEELENYQKMRRSSTASRCIHDHHCGSQTAAVKQSRTNLSSMELPFRNDFAQPQPMKTFNSTFKKSSYTFKQAHECPEQVIEDRVMEEIPCEIYVRGREDAAQGSLSIDF
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339392..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368559..3368603,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388198)
location: region:3339392-3388198:1
so has part: feature:3339392-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368559-3368603:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388198:1:exon

XP_008112112.1
type: Protein
SIO_000068: ncbiprotein

position:3339392:1
position: 3339392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3388198:1
position: 3388198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3339392-3339425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368559-3368603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3368699-3368826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3370864-3371092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3373639-3373752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3387618-3388198:1:exon

neto2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: neto2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 2 isoform X1
translation: MALEQVYSVLEVFLITILVVEGIAVAQKTQVGQNTGGNRMASTQCSDWVRTSNGGHFASPNFPKFYPPNQECVYILEAAPRQRIELTFDEPYYIEPSFECRFDHLEVRDGPFGFSPLIDRYCGLKSPTLIRSTGRFMWIKFTSDEELEGEGFKAKYSFIPDPDFTYLGGILNPIPDCQFELSGADGIVRSSQVEQEEKTKPGQAVDCIWTIKATPNAKIYLRFLDYQMEHSNECKRNFVAVYDGSSSIENLKAKFCSTVANDVMLQTGTGVVRMWADEGSRLSRFRMLFTSFVDPPCSGGTYFCHSNMCINNSLVCNGIQNCAYPWDENHCKEKKKTGLFEQITKTHGTIIGITSGIVLVLLIISILVQVKQPRKKVMACKTTFNKTGFQEVFDPPHYELFSLRDKEISADLADLSEELENYQKMRRSSTASRCIHDHHCGSQTAAVKQSRTNLSSMELPFRNDFAQPQPMKTFNSTFKKSSYTFKQAHECPEQVIEDRVMEEIPCEIYVRGREDAAQGSLSIDF
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339392..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368559..3368603,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388198)
location: region:3339392-3388198:1
so has part: feature:3339392-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368559-3368603:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388198:1:exon

XP_008112113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3339392-3339425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368559-3368603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3368699-3368826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3370864-3371092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3373639-3373752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3387618-3388198:1:exon

neto2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: neto2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 2 isoform X1
translation: MALEQVYSVLEVFLITILVVEGIAVAQKTQVGQNTGGNRMASTQCSDWVRTSNGGHFASPNFPKFYPPNQECVYILEAAPRQRIELTFDEPYYIEPSFECRFDHLEVRDGPFGFSPLIDRYCGLKSPTLIRSTGRFMWIKFTSDEELEGEGFKAKYSFIPDPDFTYLGGILNPIPDCQFELSGADGIVRSSQVEQEEKTKPGQAVDCIWTIKATPNAKIYLRFLDYQMEHSNECKRNFVAVYDGSSSIENLKAKFCSTVANDVMLQTGTGVVRMWADEGSRLSRFRMLFTSFVDPPCSGGTYFCHSNMCINNSLVCNGIQNCAYPWDENHCKEKKKTGLFEQITKTHGTIIGITSGIVLVLLIISILVQVKQPRKKVMACKTTFNKTGFQEVFDPPHYELFSLRDKEISADLADLSEELENYQKMRRSSTASRCIHDHHCGSQTAAVKQSRTNLSSMELPFRNDFAQPQPMKTFNSTFKKSSYTFKQAHECPEQVIEDRVMEEIPCEIYVRGREDAAQGSLSIDF
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339392..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368559..3368603,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388198)
location: region:3339392-3388198:1
so has part: feature:3339392-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368559-3368603:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388198:1:exon

XP_008112115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3339392-3339425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368559-3368603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3368699-3368826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3370864-3371092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3373639-3373752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3387618-3388198:1:exon

neto2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: neto2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 2 isoform X2
translation: MALEQVYSVLEVFLITILVVEGIAVAQKTQVGQNTGGNRMASTQCSDWVRTSNGGHFASPNFPKFYPPNQECVYILEAAPRQRIELTFDEPYYIEPSFECRFDHLEVRDGPFGFSPLIDRYCGLKSPTLIRSTGRFMWIKFTSDEELEGEGFKAKYSFIPDPDFTYLGDCQFELSGADGIVRSSQVEQEEKTKPGQAVDCIWTIKATPNAKIYLRFLDYQMEHSNECKRNFVAVYDGSSSIENLKAKFCSTVANDVMLQTGTGVVRMWADEGSRLSRFRMLFTSFVDPPCSGGTYFCHSNMCINNSLVCNGIQNCAYPWDENHCKEKKKTGLFEQITKTHGTIIGITSGIVLVLLIISILVQVKQPRKKVMACKTTFNKTGFQEVFDPPHYELFSLRDKEISADLADLSEELENYQKMRRSSTASRCIHDHHCGSQTAAVKQSRTNLSSMELPFRNDFAQPQPMKTFNSTFKKSSYTFKQAHECPEQVIEDRVMEEIPCEIYVRGREDAAQGSLSIDF
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339392..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368559..3368582,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388198)
location: region:3339392-3388198:1
so has part: feature:3339392-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368559-3368582:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388198:1:exon

XP_003222975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3339392-3339425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368559-3368582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3368699-3368826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3370864-3371092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3373639-3373752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3387618-3388198:1:exon

neto2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: neto2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 2 isoform X3
translation: MALEQVYSVLEVFLITILVVEGIAVAQKTQVGQNTGGNRMASTQCSDWVRTSNGGHFASPNFPKFYPPNQECVYILEAAPRQRIELTFDEPYYIEPSFECRFDHLEVRDGPFGFSPLIDRYCGLKSPTLIRSTGRFMWIKFTSDEELEGEGFKAKYSFIPDCQFELSGADGIVRSSQVEQEEKTKPGQAVDCIWTIKATPNAKIYLRFLDYQMEHSNECKRNFVAVYDGSSSIENLKAKFCSTVANDVMLQTGTGVVRMWADEGSRLSRFRMLFTSFVDPPCSGGTYFCHSNMCINNSLVCNGIQNCAYPWDENHCKEKKKTGLFEQITKTHGTIIGITSGIVLVLLIISILVQVKQPRKKVMACKTTFNKTGFQEVFDPPHYELFSLRDKEISADLADLSEELENYQKMRRSSTASRCIHDHHCGSQTAAVKQSRTNLSSMELPFRNDFAQPQPMKTFNSTFKKSSYTFKQAHECPEQVIEDRVMEEIPCEIYVRGREDAAQGSLSIDF
SIO_010081: neto2
subclass of: SO_0000673
so part of: neto2
location: join(3339392..3339425,3363313..3363369,3365102..3365242,3366559..3366807,3368699..3368826,3370864..3371092,3373639..3373752,3387618..3388198)
location: region:3339392-3388198:1
so has part: feature:3339392-3339425:1:exon
so has part: feature:3363313-3363369:1:exon
so has part: feature:3365102-3365242:1:exon
so has part: feature:3366559-3366807:1:exon
so has part: feature:3368699-3368826:1:exon
so has part: feature:3370864-3371092:1:exon
so has part: feature:3373639-3373752:1:exon
so has part: feature:3387618-3388198:1:exon

XP_016850248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3339392-3339425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363313-3363369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3365102-3365242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3366559-3366807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3368699-3368826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3370864-3371092:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3373639-3373752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3387618-3388198:1:exon

dnaja2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: dnaja2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3422055..3438704
location: region:3422055-3438704:1
so has part: feature:3422055-3438704:1:exon
subclass of: SO_0000010

100556398
type: Gene
SIO_000068: ncbigene

position:3422055:1
position: 3422055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3438704:1
position: 3438704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3422055-3438704:1:exon

dnaja2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: dnaja2
product: DnaJ heat shock protein family (Hsp40) member A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_003222916.3
SIO_010081: dnaja2
subclass of: SO_0000673
so part of: dnaja2
location: join(3422055..3422221,3428280..3428339,3428959..3429182,3432352..3432432,3432782..3432915,3434483..3434679,3436564..3436708,3436831..3436958,3437836..3438704)
location: region:3422055-3438704:1
so has part: feature:3422055-3422221:1:exon
so has part: feature:3428280-3428339:1:exon
so has part: feature:3428959-3429182:1:exon
so has part: feature:3432352-3432432:1:exon
so has part: feature:3432782-3432915:1:exon
so has part: feature:3434483-3434679:1:exon
so has part: feature:3436564-3436708:1:exon
so has part: feature:3436831-3436958:1:exon
so has part: feature:3437836-3438704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3422055-3422221:1:exon

position:3422221:1
position: 3422221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3428280-3428339:1:exon

position:3428280:1
position: 3428280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3428339:1
position: 3428339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3428959-3429182:1:exon

position:3428959:1
position: 3428959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3429182:1
position: 3429182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3432352-3432432:1:exon

position:3432352:1
position: 3432352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3432432:1
position: 3432432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3432782-3432915:1:exon

position:3432782:1
position: 3432782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3432915:1
position: 3432915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3434483-3434679:1:exon

position:3434483:1
position: 3434483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3434679:1
position: 3434679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3436564-3436708:1:exon

position:3436564:1
position: 3436564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3436708:1
position: 3436708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3436831-3436958:1:exon

position:3436831:1
position: 3436831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3436958:1
position: 3436958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3437836-3438704:1:exon

position:3437836:1
position: 3437836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dnaja2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: dnaja2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 2
translation: MANVADTKLYDILGVPPGASDNELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGSGGMDDIFSHIFGGGLFSFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKSGAVQKCAACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKENEVFQRDGNDLHMTHKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGSVRVVRAEGMPQYRNPFEKGDLYIKFDVQFPENNWISPEKLTELEDLLPARPDVPNIISEAEEVDLQEFDSTRGSTGGQRREAYNDSSDEESGHHGPGVQCAHQ
SIO_010081: dnaja2
subclass of: SO_0000673
so part of: dnaja2
location: join(3422144..3422221,3428280..3428339,3428959..3429182,3432352..3432432,3432782..3432915,3434483..3434679,3436564..3436708,3436831..3436958,3437836..3438024)
location: region:3422144-3438024:1
so has part: feature:3422144-3422221:1:exon
so has part: feature:3428280-3428339:1:exon
so has part: feature:3428959-3429182:1:exon
so has part: feature:3432352-3432432:1:exon
so has part: feature:3432782-3432915:1:exon
so has part: feature:3434483-3434679:1:exon
so has part: feature:3436564-3436708:1:exon
so has part: feature:3436831-3436958:1:exon
so has part: feature:3437836-3438024:1:exon

XP_003222964.1
type: Protein
SIO_000068: ncbiprotein

position:3422144:1
position: 3422144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3438024:1
position: 3438024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3422144-3422221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3428280-3428339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3428959-3429182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3432352-3432432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3432782-3432915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3434483-3434679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3436564-3436708:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3436831-3436958:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3437836-3438024:1:exon

LOC100558745
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC100558745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3441608..3452485)
location: region:3441608-3452485:-1
so has part: feature:3441608-3452485:-1:exon
subclass of: SO_0000010

100558745
type: Gene
SIO_000068: ncbigene

position:3441608:-1
position: 3441608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3452485:-1
position: 3452485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3441608-3452485:-1:exon

LOC100558745
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: LOC100558745
product: borealin-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008113910.2
SIO_010081: LOC100558745
subclass of: SO_0000673
so part of: LOC100558745
location: complement(join(3441608..3441829,3443744..3443830,3443960..3444089,3445486..3445593,3447543..3447610,3448626..3448702,3450411..3450471,3451001..3451053,3451656..3451784,3452169..3452485))
location: region:3441608-3452485:-1
so has part: feature:3452169-3452485:-1:exon
so has part: feature:3451656-3451784:-1:exon
so has part: feature:3451001-3451053:-1:exon
so has part: feature:3450411-3450471:-1:exon
so has part: feature:3448626-3448702:-1:exon
so has part: feature:3447543-3447610:-1:exon
so has part: feature:3445486-3445593:-1:exon
so has part: feature:3443960-3444089:-1:exon
so has part: feature:3443744-3443830:-1:exon
so has part: feature:3441608-3441829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3452169-3452485:-1:exon

position:3452169:-1
position: 3452169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3451656-3451784:-1:exon

position:3451656:-1
position: 3451656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3451784:-1
position: 3451784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3451001-3451053:-1:exon

position:3451001:-1
position: 3451001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3451053:-1
position: 3451053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3450411-3450471:-1:exon

position:3450411:-1
position: 3450411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450471:-1
position: 3450471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3448626-3448702:-1:exon

position:3448626:-1
position: 3448626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3448702:-1
position: 3448702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3447543-3447610:-1:exon

position:3447543:-1
position: 3447543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3447610:-1
position: 3447610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3445486-3445593:-1:exon

position:3445486:-1
position: 3445486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3445593:-1
position: 3445593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3443960-3444089:-1:exon

position:3443960:-1
position: 3443960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444089:-1
position: 3444089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3443744-3443830:-1:exon

position:3443744:-1
position: 3443744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3443830:-1
position: 3443830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3441608-3441829:-1:exon

position:3441829:-1
position: 3441829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100558745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: LOC100558745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: borealin-2
translation: MEVKKHLDEAKKHSSDSGMGPERSLLSKEQRDHRISLFLQDFDHQAKGNLQEMKKELASLLHTAEKAFRVELLALPVVMRKMRRKDLMHLKDDEAAAATVAANLDMNDCCIGQLAAPKPVRTNSKRVKVTTIVEYKDEKEENGRQAKKTSQKIFKTNSLASLASVIKGKQSTVSRSSSVCSSSKSRTIERSASLRERPTSASKFNSLGSKRAPQRGLSQSASTSDKTRAAILRSSSLPHERSVPFVNIPLADGKTLCSAGDDLQNINVELLNDDTVQHIHTLVNNLTVLCGKATVKSS
SIO_010081: LOC100558745
subclass of: SO_0000673
so part of: LOC100558745
location: complement(join(3441782..3441829,3443744..3443830,3443960..3444089,3445486..3445593,3447543..3447610,3448626..3448702,3450411..3450471,3451001..3451053,3451656..3451784,3452169..3452304))
location: region:3441782-3452304:-1
so has part: feature:3452169-3452304:-1:exon
so has part: feature:3451656-3451784:-1:exon
so has part: feature:3451001-3451053:-1:exon
so has part: feature:3450411-3450471:-1:exon
so has part: feature:3448626-3448702:-1:exon
so has part: feature:3447543-3447610:-1:exon
so has part: feature:3445486-3445593:-1:exon
so has part: feature:3443960-3444089:-1:exon
so has part: feature:3443744-3443830:-1:exon
so has part: feature:3441782-3441829:-1:exon

XP_008112117.1
type: Protein
SIO_000068: ncbiprotein

position:3441782:-1
position: 3441782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3452304:-1
position: 3452304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3452169-3452304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3451656-3451784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3451001-3451053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3450411-3450471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448626-3448702:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3447543-3447610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3445486-3445593:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3443960-3444089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3443744-3443830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3441782-3441829:-1:exon

mir5392
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
alternative label: aca-mir-5392
gene: mir5392
gene synonym: aca-mir-5392
note: microRNA 5392; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(3458432..3458509)
location: region:3458432-3458509:-1
so has part: feature:3458432-3458509:-1:exon
subclass of: SO_0000571

104794080
type: Gene
SIO_000068: ncbigene

MI0018699
type: miRBase
SIO_000068: mirbase

position:3458432:-1
position: 3458432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3458509:-1
position: 3458509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3458432-3458509:-1:exon

mir5392
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 28377
alternative label: aca-mir-5392
gene: mir5392
gene synonym: aca-mir-5392
product: microRNA 5392
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_129810.1
SIO_010081: mir5392
subclass of: SO_0000673
so part of: mir5392
location: complement(3458432..3458509)
location: region:3458432-3458509:-1
so has part: feature:3458432-3458509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3458432-3458509:-1:exon

mir5392
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 28377
alternative label: aca-mir-5392
nc RNA class: miRNA
gene: mir5392
gene synonym: aca-mir-5392
product: aca-miR-5392
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: mir5392
subclass of: SO_0000673
so part of: mir5392
location: complement(3458482..3458501)
location: region:3458482-3458501:-1
so has part: feature:3458482-3458501:-1:exon

MIMAT0021690
type: miRBase
SIO_000068: mirbase

position:3458482:-1
position: 3458482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3458501:-1
position: 3458501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3458482-3458501:-1:exon

gpt2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: gpt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3459664..3497165)
location: region:3459664-3497165:-1
so has part: feature:3459664-3497165:-1:exon
subclass of: SO_0000010

100558944
type: Gene
SIO_000068: ncbigene

position:3459664:-1
position: 3459664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3497165:-1
position: 3497165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3459664-3497165:-1:exon

gpt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: gpt2
product: glutamic pyruvate transaminase (alanine aminotransferase) 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_003222929.3
SIO_010081: gpt2
subclass of: SO_0000673
so part of: gpt2
location: complement(join(3459664..3460219,3460442..3460554,3462329..3462484,3464511..3464685,3468756..3468892,3469017..3469096,3470841..3471084,3473745..3473878,3482467..3482575,3483242..3483331,3496740..3497165))
location: region:3459664-3497165:-1
so has part: feature:3496740-3497165:-1:exon
so has part: feature:3483242-3483331:-1:exon
so has part: feature:3482467-3482575:-1:exon
so has part: feature:3473745-3473878:-1:exon
so has part: feature:3470841-3471084:-1:exon
so has part: feature:3469017-3469096:-1:exon
so has part: feature:3468756-3468892:-1:exon
so has part: feature:3464511-3464685:-1:exon
so has part: feature:3462329-3462484:-1:exon
so has part: feature:3460442-3460554:-1:exon
so has part: feature:3459664-3460219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3496740-3497165:-1:exon

position:3496740:-1
position: 3496740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3483242-3483331:-1:exon

position:3483242:-1
position: 3483242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3483331:-1
position: 3483331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3482467-3482575:-1:exon

position:3482467:-1
position: 3482467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3482575:-1
position: 3482575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3473745-3473878:-1:exon

position:3473745:-1
position: 3473745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473878:-1
position: 3473878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3470841-3471084:-1:exon

position:3470841:-1
position: 3470841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3471084:-1
position: 3471084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3469017-3469096:-1:exon

position:3469017:-1
position: 3469017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3469096:-1
position: 3469096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3468756-3468892:-1:exon

position:3468756:-1
position: 3468756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3468892:-1
position: 3468892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3464511-3464685:-1:exon

position:3464511:-1
position: 3464511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3464685:-1
position: 3464685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3462329-3462484:-1:exon

position:3462329:-1
position: 3462329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3462484:-1
position: 3462484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3460442-3460554:-1:exon

position:3460442:-1
position: 3460442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3460554:-1
position: 3460554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3459664-3460219:-1:exon

position:3460219:-1
position: 3460219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gpt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: gpt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanine aminotransferase 2
translation: MLRLPALALDGPLRGKEAGARWVCSLMAGPRRDKAERKGRAPSRWKSAKAQASAVKEEKQSREKILTLESMNPQVKAVEYAVRGPIVLKAGEIENELRKGIKKPFTEVIKANIGDAHAMGQQPITFLRQVVALCTYPNLLDSPSFPEDSKKRARRILQGCGGNSLGSYSASQGVNCIREDVAAYIERRDGGVPADPENIYLTTGASDGIATILKILVSGGGRSRTGVMIPIPQYPLYSAAISELDAIQVNYYLDEENCWALDVDELRRSLNEAKAYCNPKVLCIINPGNPTGQVQSRKCIEEVIHFAWEEKLFLLADEVYQDNVYSESCQFHSFKKILYEMGPDYCNNVELASFHSTSKGYMGECGYRGGYMEVVNLHPDIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVPAEESYAQFIKEKESVLNNLAKKAKLTEDMFNQVPGIHCNPLQGAMYAFPRIFIPSKAIEAAKIHKMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKILLEKVKDFHIKFLEEYS
SIO_010081: gpt2
subclass of: SO_0000673
so part of: gpt2
location: complement(join(3460129..3460219,3460442..3460554,3462329..3462484,3464511..3464685,3468756..3468892,3469017..3469096,3470841..3471084,3473745..3473878,3482467..3482575,3483242..3483331,3496740..3497036))
location: region:3460129-3497036:-1
so has part: feature:3496740-3497036:-1:exon
so has part: feature:3483242-3483331:-1:exon
so has part: feature:3482467-3482575:-1:exon
so has part: feature:3473745-3473878:-1:exon
so has part: feature:3470841-3471084:-1:exon
so has part: feature:3469017-3469096:-1:exon
so has part: feature:3468756-3468892:-1:exon
so has part: feature:3464511-3464685:-1:exon
so has part: feature:3462329-3462484:-1:exon
so has part: feature:3460442-3460554:-1:exon
so has part: feature:3460129-3460219:-1:exon

XP_003222977.1
type: Protein
SIO_000068: ncbiprotein

position:3460129:-1
position: 3460129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3497036:-1
position: 3497036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3496740-3497036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3483242-3483331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3482467-3482575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3473745-3473878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3470841-3471084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3469017-3469096:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3468756-3468892:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3464511-3464685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3462329-3462484:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3460442-3460554:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3460129-3460219:-1:exon

cch16orf87
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: cch16orf87
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3497035..3526822
location: region:3497035-3526822:1
so has part: feature:3497035-3526822:1:exon
subclass of: SO_0000010

100559137
type: Gene
SIO_000068: ncbigene

position:3497035:1
position: 3497035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3526822:1
position: 3526822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3497035-3526822:1:exon

cch16orf87
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cch16orf87
product: chromosome c open reading frame, human C16orf87
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008113919.1
SIO_010081: cch16orf87
subclass of: SO_0000673
so part of: cch16orf87
location: join(3497035..3497169,3510113..3510178,3522419..3522515,3524325..3524507,3526232..3526822)
location: region:3497035-3526822:1
so has part: feature:3497035-3497169:1:exon
so has part: feature:3510113-3510178:1:exon
so has part: feature:3522419-3522515:1:exon
so has part: feature:3524325-3524507:1:exon
so has part: feature:3526232-3526822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3497035-3497169:1:exon

position:3497169:1
position: 3497169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3510113-3510178:1:exon

position:3510113:1
position: 3510113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3510178:1
position: 3510178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3522419-3522515:1:exon

position:3522419:1
position: 3522419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3522515:1
position: 3522515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3524325-3524507:1:exon

position:3524325:1
position: 3524325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3524507:1
position: 3524507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3526232-3526822:1:exon

position:3526232:1
position: 3526232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cch16orf87
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cch16orf87
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0547 protein C16orf87 homolog
translation: MAGEAQGSGAAHSLIHAPLARLLLYAARRLHQPQTPGRACLMGLVIKRSDSLNKPYAPQILRELKINVPVACKSCPCGYIFISRKLLNAKRSERLPPTAEIRNEAKRRRTERVRRERINSVVNKDLENRRRSRSNSHSDHSRRGRGRPKTATAKKHEDEREKQEKEVDMYANLSDEKAFVFSVALAEINRKIINQRLIL
SIO_010081: cch16orf87
subclass of: SO_0000673
so part of: cch16orf87
location: join(3497035..3497169,3510113..3510178,3522419..3522515,3524325..3524507,3526232..3526350)
location: region:3497035-3526350:1
so has part: feature:3497035-3497169:1:exon
so has part: feature:3510113-3510178:1:exon
so has part: feature:3522419-3522515:1:exon
so has part: feature:3524325-3524507:1:exon
so has part: feature:3526232-3526350:1:exon

XP_008112126.1
type: Protein
SIO_000068: ncbiprotein

position:3526350:1
position: 3526350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3497035-3497169:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3510113-3510178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3522419-3522515:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3524325-3524507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3526232-3526350:1:exon

mylk3
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: mylk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3540980..3588788
location: region:3540980-3588788:1
so has part: feature:3540980-3588788:1:exon
subclass of: SO_0000010

100559335
type: Gene
SIO_000068: ncbigene

position:3540980:1
position: 3540980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3588788:1
position: 3588788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3540980-3588788:1:exon

mylk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: mylk3
product: myosin light chain kinase 3, transcript variant X2
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01037480.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 142 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016994760.1
SIO_010081: mylk3
subclass of: SO_0000673
so part of: mylk3
location: join(3540980..3541050,3541141..3541249,3567044..3567134,3568150..3568549,3570790..3571349,3572091..3572196,3573876..3573969,3576681..>3576790,<3580650..3580720,3581550..3581678,3581857..3582009,3585164..3585296,3586857..3588788)
location: region:3540980-3588788:1
so has part: feature:3540980-3541050:1:exon
so has part: feature:3541141-3541249:1:exon
so has part: feature:3567044-3567134:1:exon
so has part: feature:3568150-3568549:1:exon
so has part: feature:3570790-3571349:1:exon
so has part: feature:3572091-3572196:1:exon
so has part: feature:3573876-3573969:1:exon
so has part: feature:3576681-3576790:1:exon
so has part: feature:3580650-3580720:1:exon
so has part: feature:3581550-3581678:1:exon
so has part: feature:3581857-3582009:1:exon
so has part: feature:3585164-3585296:1:exon
so has part: feature:3586857-3588788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3540980-3541050:1:exon

position:3541050:1
position: 3541050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3541141-3541249:1:exon

position:3541141:1
position: 3541141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3541249:1
position: 3541249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3567044-3567134:1:exon

position:3567044:1
position: 3567044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3567134:1
position: 3567134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3568150-3568549:1:exon

position:3568150:1
position: 3568150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3568549:1
position: 3568549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3570790-3571349:1:exon

position:3570790:1
position: 3570790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3571349:1
position: 3571349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3572091-3572196:1:exon

position:3572091:1
position: 3572091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3572196:1
position: 3572196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3573876-3573969:1:exon

position:3573876:1
position: 3573876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3573969:1
position: 3573969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3576681-3576790:1:exon

position:3576681:1
position: 3576681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3576790:1
position: 3576790
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3580650-3580720:1:exon

position:3580650:1
position: 3580650
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3580720:1
position: 3580720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3581550-3581678:1:exon

position:3581550:1
position: 3581550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3581678:1
position: 3581678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3581857-3582009:1:exon

position:3581857:1
position: 3581857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3582009:1
position: 3582009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3585164-3585296:1:exon

position:3585164:1
position: 3585164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3585296:1
position: 3585296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3586857-3588788:1:exon

position:3586857:1
position: 3586857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mylk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: mylk3
product: myosin light chain kinase 3, transcript variant X3
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01037480.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 142 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016994761.1
SIO_010081: mylk3
subclass of: SO_0000673
so part of: mylk3
location: join(3541045..3541249,3567044..3567134,3568150..3568549,3570790..3571349,3572091..3572196,3573876..3573969,3576681..>3576790,<3580650..3580720,3581550..3581678,3581857..3582009,3585164..3585296,3586857..3588788)
location: region:3541045-3588788:1
so has part: feature:3541045-3541249:1:exon
so has part: feature:3567044-3567134:1:exon
so has part: feature:3568150-3568549:1:exon
so has part: feature:3570790-3571349:1:exon
so has part: feature:3572091-3572196:1:exon
so has part: feature:3573876-3573969:1:exon
so has part: feature:3576681-3576790:1:exon
so has part: feature:3580650-3580720:1:exon
so has part: feature:3581550-3581678:1:exon
so has part: feature:3581857-3582009:1:exon
so has part: feature:3585164-3585296:1:exon
so has part: feature:3586857-3588788:1:exon

position:3541045:1
position: 3541045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3541045-3541249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3567044-3567134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568150-3568549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3570790-3571349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3572091-3572196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3573876-3573969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3576681-3576790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3580650-3580720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3581550-3581678:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3581857-3582009:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3585164-3585296:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3586857-3588788:1:exon

mylk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: mylk3
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01037480.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 142 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase 3 isoform X2
translation: MLVTNSTLGQGWKTNERTKDKPEEKGAKGKHAPANKGIQAEGKTSLEENKREKKLDECIEGCEKVNSASSVVSKVDSSLHVKERMAQLERAEMPGQTKGSKVSPKQKESGIKTVVQKSGLVSSKSSANPPGNQNMDTTSSGLEDLPQKPKEMGKNTSRLSSPMKEVDPSASKSGSDVVRTRLSINVQMTDAQSKSSKSKEGATSSPGGKSTESSAVVPSLPVGEGAKHLPEPCKAKQLSKGSRTEPTQELKGQKPFTKPGEKQTPKPQVLPSAPSPKTEENTESQCKAVPCLVSVAKDPGKDPGSPVQSPEETTTGMKDSGKDVMPENVELRSLALRRRESRSSQGAETPSENASLQVPGKAEEVVIDDSPPPPAPFEHRIVSIKQTELTASYAICQHEVLGGGRFGEVHKCDEKSTGLCLAAKIIKVKAAKEREEVKNEINIMNQLNHVNLIQLYDAFESKNNLTLIMEYVDGGELFDRIIDENYNLTELDAILFTKQICEGIHYLHQQYILHLDLKPENILCVNHTGNQIKIIDFGLARRYKPRDKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGETDTETMNYIVNCSWDFDAEAFEQVSDEAKDFVSRLLIKEKSGRTSAAKCLKHEWLTDLPSKAKKSKVRLKSQLLLQRYMAQRKWKKHFYVVAAANRLRRFPSLSESPV
SIO_010081: mylk3
subclass of: SO_0000673
so part of: mylk3
location: join(3541199..3541249,3567044..3567134,3568150..3568549,3570790..3571349,3572091..3572196,3573876..3573969,3576681..>3576790,<3580650..3580720,3581550..3581678,3581857..3582009,3585164..3585296,3586857..3586928)
location: region:3541199-3586928:1
so has part: feature:3541199-3541249:1:exon
so has part: feature:3567044-3567134:1:exon
so has part: feature:3568150-3568549:1:exon
so has part: feature:3570790-3571349:1:exon
so has part: feature:3572091-3572196:1:exon
so has part: feature:3573876-3573969:1:exon
so has part: feature:3576681-3576790:1:exon
so has part: feature:3580650-3580720:1:exon
so has part: feature:3581550-3581678:1:exon
so has part: feature:3581857-3582009:1:exon
so has part: feature:3585164-3585296:1:exon
so has part: feature:3586857-3586928:1:exon

XP_016850249.1
type: Protein
SIO_000068: ncbiprotein

position:3541199:1
position: 3541199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3586928:1
position: 3586928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3541199-3541249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3567044-3567134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568150-3568549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3570790-3571349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3572091-3572196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3573876-3573969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3576681-3576790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3580650-3580720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3581550-3581678:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3581857-3582009:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3585164-3585296:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3586857-3586928:1:exon

mylk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: mylk3
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01037480.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 142 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase 3 isoform X2
translation: MLVTNSTLGQGWKTNERTKDKPEEKGAKGKHAPANKGIQAEGKTSLEENKREKKLDECIEGCEKVNSASSVVSKVDSSLHVKERMAQLERAEMPGQTKGSKVSPKQKESGIKTVVQKSGLVSSKSSANPPGNQNMDTTSSGLEDLPQKPKEMGKNTSRLSSPMKEVDPSASKSGSDVVRTRLSINVQMTDAQSKSSKSKEGATSSPGGKSTESSAVVPSLPVGEGAKHLPEPCKAKQLSKGSRTEPTQELKGQKPFTKPGEKQTPKPQVLPSAPSPKTEENTESQCKAVPCLVSVAKDPGKDPGSPVQSPEETTTGMKDSGKDVMPENVELRSLALRRRESRSSQGAETPSENASLQVPGKAEEVVIDDSPPPPAPFEHRIVSIKQTELTASYAICQHEVLGGGRFGEVHKCDEKSTGLCLAAKIIKVKAAKEREEVKNEINIMNQLNHVNLIQLYDAFESKNNLTLIMEYVDGGELFDRIIDENYNLTELDAILFTKQICEGIHYLHQQYILHLDLKPENILCVNHTGNQIKIIDFGLARRYKPRDKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGETDTETMNYIVNCSWDFDAEAFEQVSDEAKDFVSRLLIKEKSGRTSAAKCLKHEWLTDLPSKAKKSKVRLKSQLLLQRYMAQRKWKKHFYVVAAANRLRRFPSLSESPV
SIO_010081: mylk3
subclass of: SO_0000673
so part of: mylk3
location: join(3541199..3541249,3567044..3567134,3568150..3568549,3570790..3571349,3572091..3572196,3573876..3573969,3576681..>3576790,<3580650..3580720,3581550..3581678,3581857..3582009,3585164..3585296,3586857..3586928)
location: region:3541199-3586928:1
so has part: feature:3541199-3541249:1:exon
so has part: feature:3567044-3567134:1:exon
so has part: feature:3568150-3568549:1:exon
so has part: feature:3570790-3571349:1:exon
so has part: feature:3572091-3572196:1:exon
so has part: feature:3573876-3573969:1:exon
so has part: feature:3576681-3576790:1:exon
so has part: feature:3580650-3580720:1:exon
so has part: feature:3581550-3581678:1:exon
so has part: feature:3581857-3582009:1:exon
so has part: feature:3585164-3585296:1:exon
so has part: feature:3586857-3586928:1:exon

XP_016850250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3541199-3541249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3567044-3567134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568150-3568549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3570790-3571349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3572091-3572196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3573876-3573969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3576681-3576790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3580650-3580720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3581550-3581678:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3581857-3582009:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3585164-3585296:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3586857-3586928:1:exon

mylk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: mylk3
product: myosin light chain kinase 3, transcript variant X1
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01037480.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 142 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008113913.2
SIO_010081: mylk3
subclass of: SO_0000673
so part of: mylk3
location: join(3560562..3561656,3567044..3567134,3568150..3568549,3570790..3571349,3572091..3572196,3573876..3573969,3576681..>3576790,<3580650..3580720,3581550..3581678,3581857..3582009,3585164..3585296,3586857..3588788)
location: region:3560562-3588788:1
so has part: feature:3560562-3561656:1:exon
so has part: feature:3567044-3567134:1:exon
so has part: feature:3568150-3568549:1:exon
so has part: feature:3570790-3571349:1:exon
so has part: feature:3572091-3572196:1:exon
so has part: feature:3573876-3573969:1:exon
so has part: feature:3576681-3576790:1:exon
so has part: feature:3580650-3580720:1:exon
so has part: feature:3581550-3581678:1:exon
so has part: feature:3581857-3582009:1:exon
so has part: feature:3585164-3585296:1:exon
so has part: feature:3586857-3588788:1:exon

position:3560562:1
position: 3560562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3560562-3561656:1:exon

position:3561656:1
position: 3561656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3567044-3567134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568150-3568549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3570790-3571349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3572091-3572196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3573876-3573969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3576681-3576790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3580650-3580720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3581550-3581678:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3581857-3582009:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3585164-3585296:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3586857-3588788:1:exon

mylk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: mylk3
inference: similar to RNA sequence, mRNA (same species):INSD:GAED01037480.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 142 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase 3 isoform X1
translation: MLESHLESEEALTNKPRVAKGNTLSTMDKKLNLLNEKVDRLLNFQEDLTGKLQKVNQGIDDLEQGLQKLSVPVDSGTKEGLKMEGEVPQTDTRSVCGEILKLIKATHQDNSVYSERIEKMEKMMDSVDKIVTFLGETFKNSKVVDFILKGGLPWRKGSPVEILPETKDKPEEKGAKGKHAPANKGIQAEGKTSLEENKREKKLDECIEGCEKVNSASSVVSKVDSSLHVKERMAQLERAEMPGQTKGSKVSPKQKESGIKTVVQKSGLVSSKSSANPPGNQNMDTTSSGLEDLPQKPKEMGKNTSRLSSPMKEVDPSASKSGSDVVRTRLSINVQMTDAQSKSSKSKEGATSSPGGKSTESSAVVPSLPVGEGAKHLPEPCKAKQLSKGSRTEPTQELKGQKPFTKPGEKQTPKPQVLPSAPSPKTEENTESQCKAVPCLVSVAKDPGKDPGSPVQSPEETTTGMKDSGKDVMPENVELRSLALRRRESRSSQGAETPSENASLQVPGKAEEVVIDDSPPPPAPFEHRIVSIKQTELTASYAICQHEVLGGGRFGEVHKCDEKSTGLCLAAKIIKVKAAKEREEVKNEINIMNQLNHVNLIQLYDAFESKNNLTLIMEYVDGGELFDRIIDENYNLTELDAILFTKQICEGIHYLHQQYILHLDLKPENILCVNHTGNQIKIIDFGLARRYKPRDKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGETDTETMNYIVNCSWDFDAEAFEQVSDEAKDFVSRLLIKEKSGRTSAAKCLKHEWLTDLPSKAKKSKVRLKSQLLLQRYMAQRKWKKHFYVVAAANRLRRFPSLSESPV
SIO_010081: mylk3
subclass of: SO_0000673
so part of: mylk3
location: join(3561162..3561656,3567044..3567134,3568150..3568549,3570790..3571349,3572091..3572196,3573876..3573969,3576681..>3576790,<3580650..3580720,3581550..3581678,3581857..3582009,3585164..3585296,3586857..3586928)
location: region:3561162-3586928:1
so has part: feature:3561162-3561656:1:exon
so has part: feature:3567044-3567134:1:exon
so has part: feature:3568150-3568549:1:exon
so has part: feature:3570790-3571349:1:exon
so has part: feature:3572091-3572196:1:exon
so has part: feature:3573876-3573969:1:exon
so has part: feature:3576681-3576790:1:exon
so has part: feature:3580650-3580720:1:exon
so has part: feature:3581550-3581678:1:exon
so has part: feature:3581857-3582009:1:exon
so has part: feature:3585164-3585296:1:exon
so has part: feature:3586857-3586928:1:exon

XP_008112120.1
type: Protein
SIO_000068: ncbiprotein

position:3561162:1
position: 3561162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3561162-3561656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3567044-3567134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568150-3568549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3570790-3571349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3572091-3572196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3573876-3573969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3576681-3576790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3580650-3580720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3581550-3581678:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3581857-3582009:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3585164-3585296:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3586857-3586928:1:exon

orc6
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: orc6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3571441..3598396)
location: region:3571441-3598396:-1
so has part: feature:3571441-3598396:-1:exon
subclass of: SO_0000010

100559533
type: Gene
SIO_000068: ncbigene

position:3571441:-1
position: 3571441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3598396:-1
position: 3598396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3571441-3598396:-1:exon

orc6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: orc6
product: origin recognition complex subunit 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_008113912.2
SIO_010081: orc6
subclass of: SO_0000673
so part of: orc6
location: complement(join(3571441..3571989,3589920..3589994,3591168..3591280,3591536..3591625,3593102..3593265,3593376..3593505,3597978..3598396))
location: region:3571441-3598396:-1
so has part: feature:3597978-3598396:-1:exon
so has part: feature:3593376-3593505:-1:exon
so has part: feature:3593102-3593265:-1:exon
so has part: feature:3591536-3591625:-1:exon
so has part: feature:3591168-3591280:-1:exon
so has part: feature:3589920-3589994:-1:exon
so has part: feature:3571441-3571989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3597978-3598396:-1:exon

position:3597978:-1
position: 3597978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3593376-3593505:-1:exon

position:3593376:-1
position: 3593376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3593505:-1
position: 3593505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3593102-3593265:-1:exon

position:3593102:-1
position: 3593102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3593265:-1
position: 3593265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3591536-3591625:-1:exon

position:3591536:-1
position: 3591536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3591625:-1
position: 3591625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3591168-3591280:-1:exon

position:3591168:-1
position: 3591168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3591280:-1
position: 3591280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3589920-3589994:-1:exon

position:3589920:-1
position: 3589920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3589994:-1
position: 3589994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3571441-3571989:-1:exon

position:3571989:-1
position: 3571989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

orc6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: orc6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: origin recognition complex subunit 6 isoform X2
translation: MEREVIQRLASKMGVTAPAVIRKAEEYLRLSQVKCGPLLAQVSATSRAVICLDLAAAFTKNPVDKSYVVTLSGLNKATYQSSLRSFESLLGLRSNLSLRDLAVQFCCLEAVNLALKILKRYESSLPEAQQMDLDLSKPLFTTAALFTACRCLKLKVDKSKMVAASGVKKAIFDRLHCQLEKIGQQVSRESDQLMAEAPKTQKTFLDCLGKGKGGDASRYE
SIO_010081: orc6
subclass of: SO_0000673
so part of: orc6
location: complement(join(3571964..3571989,3589920..3589994,3591168..3591280,3591536..3591625,3593102..3593265,3593376..3593505,3597978..3598042))
location: region:3571964-3598042:-1
so has part: feature:3597978-3598042:-1:exon
so has part: feature:3593376-3593505:-1:exon
so has part: feature:3593102-3593265:-1:exon
so has part: feature:3591536-3591625:-1:exon
so has part: feature:3591168-3591280:-1:exon
so has part: feature:3589920-3589994:-1:exon
so has part: feature:3571964-3571989:-1:exon

XP_008112119.1
type: Protein
SIO_000068: ncbiprotein

position:3571964:-1
position: 3571964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3598042:-1
position: 3598042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3597978-3598042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3593376-3593505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3593102-3593265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3591536-3591625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3591168-3591280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3589920-3589994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3571964-3571989:-1:exon

orc6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: orc6
product: origin recognition complex subunit 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_003222932.3
SIO_010081: orc6
subclass of: SO_0000673
so part of: orc6
location: complement(join(3588184..3588975,3589920..3589994,3591168..3591280,3591536..3591625,3593102..3593265,3593376..3593505,3597978..3598395))
location: region:3588184-3598395:-1
so has part: feature:3597978-3598395:-1:exon
so has part: feature:3593376-3593505:-1:exon
so has part: feature:3593102-3593265:-1:exon
so has part: feature:3591536-3591625:-1:exon
so has part: feature:3591168-3591280:-1:exon
so has part: feature:3589920-3589994:-1:exon
so has part: feature:3588184-3588975:-1:exon

position:3588184:-1
position: 3588184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3598395:-1
position: 3598395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3597978-3598395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3593376-3593505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3593102-3593265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3591536-3591625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3591168-3591280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3589920-3589994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3588184-3588975:-1:exon

position:3588975:-1
position: 3588975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

orc6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: orc6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: origin recognition complex subunit 6 isoform X1
translation: MEREVIQRLASKMGVTAPAVIRKAEEYLRLSQVKCGPLLAQVSATSRAVICLDLAAAFTKNPVDKSYVVTLSGLNKATYQSSLRSFESLLGLRSNLSLRDLAVQFCCLEAVNLALKILKRYESSLPEAQQMDLDLSKPLFTTAALFTACRCLKLKVDKSKMVAASGVKKAIFDRLHCQLEKIGQQVSRESDQLMAEAPKTQKTFLDCLGKGKALETDVMAPRKRPKRDTEVMEDYEAWKKRILENAAKSQEENV
SIO_010081: orc6
subclass of: SO_0000673
so part of: orc6
location: complement(join(3588848..3588975,3589920..3589994,3591168..3591280,3591536..3591625,3593102..3593265,3593376..3593505,3597978..3598042))
location: region:3588848-3598042:-1
so has part: feature:3597978-3598042:-1:exon
so has part: feature:3593376-3593505:-1:exon
so has part: feature:3593102-3593265:-1:exon
so has part: feature:3591536-3591625:-1:exon
so has part: feature:3591168-3591280:-1:exon
so has part: feature:3589920-3589994:-1:exon
so has part: feature:3588848-3588975:-1:exon

XP_003222980.2
type: Protein
SIO_000068: ncbiprotein

position:3588848:-1
position: 3588848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3597978-3598042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3593376-3593505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3593102-3593265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3591536-3591625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3591168-3591280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3589920-3589994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3588848-3588975:-1:exon

vps35
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: vps35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3598583..3632255
location: region:3598583-3632255:1
so has part: feature:3598583-3632255:1:exon
subclass of: SO_0000010

100559729
type: Gene
SIO_000068: ncbigene

position:3598583:1
position: 3598583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3632255:1
position: 3632255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3598583-3632255:1:exon

vps35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: vps35
product: VPS35 retromer complex component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_008113914.2
SIO_010081: vps35
subclass of: SO_0000673
so part of: vps35
location: join(3598583..3598695,3607708..3607806,3609211..3609307,3610401..3610524,3611626..3611808,3613026..3613239,3613392..3613475,3614415..3614524,3616616..3616712,3618091..3618239,3618540..3618747,3619666..3619821,3624147..3624269,3625058..3625237,3626311..3626550,3627922..3628065,3631217..3632255)
location: region:3598583-3632255:1
so has part: feature:3598583-3598695:1:exon
so has part: feature:3607708-3607806:1:exon
so has part: feature:3609211-3609307:1:exon
so has part: feature:3610401-3610524:1:exon
so has part: feature:3611626-3611808:1:exon
so has part: feature:3613026-3613239:1:exon
so has part: feature:3613392-3613475:1:exon
so has part: feature:3614415-3614524:1:exon
so has part: feature:3616616-3616712:1:exon
so has part: feature:3618091-3618239:1:exon
so has part: feature:3618540-3618747:1:exon
so has part: feature:3619666-3619821:1:exon
so has part: feature:3624147-3624269:1:exon
so has part: feature:3625058-3625237:1:exon
so has part: feature:3626311-3626550:1:exon
so has part: feature:3627922-3628065:1:exon
so has part: feature:3631217-3632255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3598583-3598695:1:exon

position:3598695:1
position: 3598695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3607708-3607806:1:exon

position:3607708:1
position: 3607708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3607806:1
position: 3607806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3609211-3609307:1:exon

position:3609211:1
position: 3609211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3609307:1
position: 3609307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3610401-3610524:1:exon

position:3610401:1
position: 3610401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3610524:1
position: 3610524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3611626-3611808:1:exon

position:3611626:1
position: 3611626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3611808:1
position: 3611808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3613026-3613239:1:exon

position:3613026:1
position: 3613026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3613239:1
position: 3613239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3613392-3613475:1:exon

position:3613392:1
position: 3613392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3613475:1
position: 3613475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3614415-3614524:1:exon

position:3614415:1
position: 3614415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3614524:1
position: 3614524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3616616-3616712:1:exon

position:3616616:1
position: 3616616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3616712:1
position: 3616712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3618091-3618239:1:exon

position:3618091:1
position: 3618091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3618239:1
position: 3618239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3618540-3618747:1:exon

position:3618540:1
position: 3618540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3618747:1
position: 3618747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3619666-3619821:1:exon

position:3619666:1
position: 3619666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3619821:1
position: 3619821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3624147-3624269:1:exon

position:3624147:1
position: 3624147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3624269:1
position: 3624269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3625058-3625237:1:exon

position:3625058:1
position: 3625058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3625237:1
position: 3625237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3626311-3626550:1:exon

position:3626311:1
position: 3626311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3626550:1
position: 3626550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3627922-3628065:1:exon

position:3627922:1
position: 3627922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3628065:1
position: 3628065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3631217-3632255:1:exon

position:3631217:1
position: 3631217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vps35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: vps35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 35
translation: MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQTDEEMTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPSDIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNVLTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDAIMNLVSTLIQDQPDQPAEDPDPEDFADEQGLVGRFIHLLRSDDPNQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENAKEDDKWEKKCQKIFTFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFGEENHEPLRTQCALAASKLLKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLRRESPESDGPIYEGLVI
SIO_010081: vps35
subclass of: SO_0000673
so part of: vps35
location: join(3598693..3598695,3607708..3607806,3609211..3609307,3610401..3610524,3611626..3611808,3613026..3613239,3613392..3613475,3614415..3614524,3616616..3616712,3618091..3618239,3618540..3618747,3619666..3619821,3624147..3624269,3625058..3625237,3626311..3626550,3627922..3628065,3631217..3631396)
location: region:3598693-3631396:1
so has part: feature:3598693-3598695:1:exon
so has part: feature:3607708-3607806:1:exon
so has part: feature:3609211-3609307:1:exon
so has part: feature:3610401-3610524:1:exon
so has part: feature:3611626-3611808:1:exon
so has part: feature:3613026-3613239:1:exon
so has part: feature:3613392-3613475:1:exon
so has part: feature:3614415-3614524:1:exon
so has part: feature:3616616-3616712:1:exon
so has part: feature:3618091-3618239:1:exon
so has part: feature:3618540-3618747:1:exon
so has part: feature:3619666-3619821:1:exon
so has part: feature:3624147-3624269:1:exon
so has part: feature:3625058-3625237:1:exon
so has part: feature:3626311-3626550:1:exon
so has part: feature:3627922-3628065:1:exon
so has part: feature:3631217-3631396:1:exon

XP_008112121.1
type: Protein
SIO_000068: ncbiprotein

position:3598693:1
position: 3598693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3631396:1
position: 3631396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3598693-3598695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3607708-3607806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3609211-3609307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3610401-3610524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3611626-3611808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3613026-3613239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3613392-3613475:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3614415-3614524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3616616-3616712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3618091-3618239:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3618540-3618747:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3619666-3619821:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3624147-3624269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3625058-3625237:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3626311-3626550:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3627922-3628065:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3631217-3631396:1:exon

LOC100559929
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC100559929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3636589..3646859)
location: region:3636589-3646859:-1
so has part: feature:3636589-3646859:-1:exon
subclass of: SO_0000010

100559929
type: Gene
SIO_000068: ncbigene

position:3636589:-1
position: 3636589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3646859:-1
position: 3646859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3636589-3646859:-1:exon

LOC100559929
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: LOC100559929
product: histamine H3 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_003222934.3
SIO_010081: LOC100559929
subclass of: SO_0000673
so part of: LOC100559929
location: complement(join(3636589..3638021,3639492..3639658,3646485..3646859))
location: region:3636589-3646859:-1
so has part: feature:3646485-3646859:-1:exon
so has part: feature:3639492-3639658:-1:exon
so has part: feature:3636589-3638021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3646485-3646859:-1:exon

position:3646485:-1
position: 3646485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3639492-3639658:-1:exon

position:3639492:-1
position: 3639492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3639658:-1
position: 3639658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3636589-3638021:-1:exon

position:3638021:-1
position: 3638021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100559929
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: LOC100559929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H3 receptor
translation: MGTELNASSSSSSTSSSSSPRDQGCLGPCPPPGALSAPLSVFLAALMALLVLATVCGNALVVVAFALDRSLRSQGNFFFLNLAIADLLVGGFCIPLYIPYILTGEWKFGKGLCKVWLVVDYLVCTASVFNIVLISFDRFISVTKAVSYRAQKGVTKNAVVKMVMVWVAAFLLYGPAIISWEHVTQRSIVSEKECHAEFFYNWYFLMIASTIEFFTPFISVTYFNLSIYFNIRKRTPIRTETLSPGERDCEVCSHGKKQEHAIFFMKVSRKRNNEQTGSLSPTKLATSKLNGHHQHNQLVEFNIDQDLPPLQVDVQSKSPWDGFYKALEGISNNTKKMEVANTMASRFRLSRDKKVAKSLAIIVCIFALCWAPYTLLMIIRAACHGQCIHHALYEASFWLLWLNSAINPILYPLCHMSFRKAFFKLLCPGKAKIHPNIFS
SIO_010081: LOC100559929
subclass of: SO_0000673
so part of: LOC100559929
location: complement(join(3637137..3638021,3639492..3639658,3646485..3646752))
location: region:3637137-3646752:-1
so has part: feature:3646485-3646752:-1:exon
so has part: feature:3639492-3639658:-1:exon
so has part: feature:3637137-3638021:-1:exon

XP_003222982.1
type: Protein
SIO_000068: ncbiprotein

position:3637137:-1
position: 3637137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3646752:-1
position: 3646752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3646485-3646752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3639492-3639658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637137-3638021:-1:exon

LOC103279339
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC103279339
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3653404..3661852
location: region:3653404-3661852:1
so has part: feature:3653404-3661852:1:exon
subclass of: SO_0000011

103279339
type: Gene
SIO_000068: ncbigene

position:3653404:1
position: 3653404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3661852:1
position: 3661852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3653404-3661852:1:exon

LOC103279339
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 28377
nc RNA class: lncRNA
gene: LOC103279339
product: uncharacterized LOC103279339, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001730485.1
SIO_010081: LOC103279339
subclass of: SO_0000673
so part of: LOC103279339
location: join(3653404..3653502,3660975..3661852)
location: region:3653404-3661852:1
so has part: feature:3653404-3653502:1:exon
so has part: feature:3660975-3661852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3653404-3653502:1:exon

position:3653502:1
position: 3653502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3660975-3661852:1:exon

position:3660975:1
position: 3660975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103279339
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 28377
nc RNA class: lncRNA
gene: LOC103279339
product: uncharacterized LOC103279339, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_506713.2
SIO_010081: LOC103279339
subclass of: SO_0000673
so part of: LOC103279339
location: join(3653414..3653450,3660975..3661852)
location: region:3653414-3661852:1
so has part: feature:3653414-3653450:1:exon
so has part: feature:3660975-3661852:1:exon

position:3653414:1
position: 3653414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3653414-3653450:1:exon

position:3653450:1
position: 3653450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3660975-3661852:1:exon

LOC107983037
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC107983037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3668255..3669152
location: region:3668255-3669152:1
so has part: feature:3668255-3669152:1:exon
subclass of: SO_0000011

107983037
type: Gene
SIO_000068: ncbigene

position:3668255:1
position: 3668255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3669152:1
position: 3669152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3668255-3669152:1:exon

LOC107983037
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 28377
nc RNA class: lncRNA
gene: LOC107983037
product: uncharacterized LOC107983037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001730486.1
SIO_010081: LOC107983037
subclass of: SO_0000673
so part of: LOC107983037
location: join(3668255..3668544,3668597..3669152)
location: region:3668255-3669152:1
so has part: feature:3668255-3668544:1:exon
so has part: feature:3668597-3669152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3668255-3668544:1:exon

position:3668544:1
position: 3668544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3668597-3669152:1:exon

position:3668597:1
position: 3668597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

shcbp1
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: shcbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3733071..3773896
location: region:3733071-3773896:1
so has part: feature:3733071-3773896:1:exon
subclass of: SO_0000010

100560520
type: Gene
SIO_000068: ncbigene

position:3733071:1
position: 3733071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3773896:1
position: 3773896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733071-3773896:1:exon

shcbp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: shcbp1
product: SHC binding and spindle associated 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_008113915.2
SIO_010081: shcbp1
subclass of: SO_0000673
so part of: shcbp1
location: join(3733071..3733374,3735188..3735364,3736490..3736605,3738175..3738383,3748934..3749026,3750425..3750658,3752079..3752247,3752443..3752563,3762206..3762337,3764860..3764978,3768330..3768471,3773206..3773896)
location: region:3733071-3773896:1
so has part: feature:3733071-3733374:1:exon
so has part: feature:3735188-3735364:1:exon
so has part: feature:3736490-3736605:1:exon
so has part: feature:3738175-3738383:1:exon
so has part: feature:3748934-3749026:1:exon
so has part: feature:3750425-3750658:1:exon
so has part: feature:3752079-3752247:1:exon
so has part: feature:3752443-3752563:1:exon
so has part: feature:3762206-3762337:1:exon
so has part: feature:3764860-3764978:1:exon
so has part: feature:3768330-3768471:1:exon
so has part: feature:3773206-3773896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3733071-3733374:1:exon

position:3733374:1
position: 3733374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3735188-3735364:1:exon

position:3735188:1
position: 3735188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3735364:1
position: 3735364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3736490-3736605:1:exon

position:3736490:1
position: 3736490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3736605:1
position: 3736605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3738175-3738383:1:exon

position:3738175:1
position: 3738175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3738383:1
position: 3738383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3748934-3749026:1:exon

position:3748934:1
position: 3748934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3749026:1
position: 3749026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3750425-3750658:1:exon

position:3750425:1
position: 3750425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3750658:1
position: 3750658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3752079-3752247:1:exon

position:3752079:1
position: 3752079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3752247:1
position: 3752247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3752443-3752563:1:exon

position:3752443:1
position: 3752443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3752563:1
position: 3752563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3762206-3762337:1:exon

position:3762206:1
position: 3762206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762337:1
position: 3762337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3764860-3764978:1:exon

position:3764860:1
position: 3764860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3764978:1
position: 3764978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3768330-3768471:1:exon

position:3768330:1
position: 3768330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3768471:1
position: 3768471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3773206-3773896:1:exon

position:3773206:1
position: 3773206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

shcbp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: shcbp1
product: SHC binding and spindle associated 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016994762.1
SIO_010081: shcbp1
subclass of: SO_0000673
so part of: shcbp1
location: join(3733072..3733374,3735188..3735364,3736490..3736605,3738175..3738383,3750425..3750658,3752079..3752247,3752443..3752563,3762206..3762337,3764860..3764978,3766414..3766500,3768330..3768471,3773206..3773896)
location: region:3733072-3773896:1
so has part: feature:3733072-3733374:1:exon
so has part: feature:3735188-3735364:1:exon
so has part: feature:3736490-3736605:1:exon
so has part: feature:3738175-3738383:1:exon
so has part: feature:3750425-3750658:1:exon
so has part: feature:3752079-3752247:1:exon
so has part: feature:3752443-3752563:1:exon
so has part: feature:3762206-3762337:1:exon
so has part: feature:3764860-3764978:1:exon
so has part: feature:3766414-3766500:1:exon
so has part: feature:3768330-3768471:1:exon
so has part: feature:3773206-3773896:1:exon

position:3733072:1
position: 3733072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733072-3733374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735188-3735364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3736490-3736605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738175-3738383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3750425-3750658:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3752079-3752247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3752443-3752563:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3762206-3762337:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3764860-3764978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3766414-3766500:1:exon

position:3766414:1
position: 3766414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766500:1
position: 3766500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3768330-3768471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3773206-3773896:1:exon

shcbp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: shcbp1
product: SHC binding and spindle associated 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_003222937.3
SIO_010081: shcbp1
subclass of: SO_0000673
so part of: shcbp1
location: join(3733074..3733374,3735188..3735364,3736490..3736605,3738175..3738383,3748934..3749026,3750425..3750658,3752079..3752247,3752443..3752563,3762206..3762337,3764860..3764978,3766414..3766500,3768330..3768471,3773206..3773896)
location: region:3733074-3773896:1
so has part: feature:3733074-3733374:1:exon
so has part: feature:3735188-3735364:1:exon
so has part: feature:3736490-3736605:1:exon
so has part: feature:3738175-3738383:1:exon
so has part: feature:3748934-3749026:1:exon
so has part: feature:3750425-3750658:1:exon
so has part: feature:3752079-3752247:1:exon
so has part: feature:3752443-3752563:1:exon
so has part: feature:3762206-3762337:1:exon
so has part: feature:3764860-3764978:1:exon
so has part: feature:3766414-3766500:1:exon
so has part: feature:3768330-3768471:1:exon
so has part: feature:3773206-3773896:1:exon

position:3733074:1
position: 3733074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733074-3733374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735188-3735364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3736490-3736605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738175-3738383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3748934-3749026:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3750425-3750658:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3752079-3752247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3752443-3752563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3762206-3762337:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3764860-3764978:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3766414-3766500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3768330-3768471:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3773206-3773896:1:exon

shcbp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: shcbp1
product: SHC binding and spindle associated 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_008113916.2
SIO_010081: shcbp1
subclass of: SO_0000673
so part of: shcbp1
location: join(3733074..3733374,3735188..3735364,3736490..3736605,3738175..3738383,3748934..3749026,3750425..3750658,3752079..3752247,3752443..3752563,3764860..3764978,3766414..3766500,3768330..3768471,3773206..3773896)
location: region:3733074-3773896:1
so has part: feature:3733074-3733374:1:exon
so has part: feature:3735188-3735364:1:exon
so has part: feature:3736490-3736605:1:exon
so has part: feature:3738175-3738383:1:exon
so has part: feature:3748934-3749026:1:exon
so has part: feature:3750425-3750658:1:exon
so has part: feature:3752079-3752247:1:exon
so has part: feature:3752443-3752563:1:exon
so has part: feature:3764860-3764978:1:exon
so has part: feature:3766414-3766500:1:exon
so has part: feature:3768330-3768471:1:exon
so has part: feature:3773206-3773896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3733074-3733374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735188-3735364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3736490-3736605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738175-3738383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3748934-3749026:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3750425-3750658:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3752079-3752247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3752443-3752563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3764860-3764978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3766414-3766500:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3768330-3768471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3773206-3773896:1:exon

shcbp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: shcbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC SH2 domain-binding protein 1 isoform X1
translation: MAEPELERPLPGEEEEESPARSGAAEKEEEEEPRGDEAEGGPLPPASDGSSCGPEESNNALEPDEDSEDSECGSCSDLGSRDQPRTALQRHSLGSNALFPDTFQTNNLLFYERFKAYQDYMLADCKVSEVKEFTAEYLEKLLEPSGWRAVWRTNVFEVLVEVVDVEYSALKAVVRLCEPFLCETRESAFTQERMQELLELKEHRLLLQELWVVFDESGEFDQTALAIEHVRFFYKHIWRSWDEEDDDDFDYFVRCVEPRLRLHYDILEDRVPSALVAEYQSRLSQCEELYRKFLDFRNSISGTDSDSEAENVSVVEGMKLYERMEQLKQKLKLIENPLLRYVFGYQKHSGLKAKGERPSGTVVTHVVSSAMMSSLLQCLFRDKLSPDAFHEEIEIQFHRDPQSAVHACHEGDRVIVCPGHYVVEGALYIADSIELEGYGLPDDIVIEERGKADAFVECTGANVKISSLKLIQHDAVEGILSVHQGKTILENCVLQCETTGVAVRTSAEFLMKNSDLYGAKGAGIEVYPGGTCTLIGNGIHHCKEGILIKDFLNENYVIPKITMVNNVIHNNEGYGVVLVKPAVSPDVKENSLESAEGEKNGESAADAVIGECEEQHKQAGGAMDSYGGDAVSEPMEDNSEIANELSLASLKKNQANKKRLSSLRFTEADDGLMAQEMFVSIVGNQFKWNGKGSFGTFLY
SIO_010081: shcbp1
subclass of: SO_0000673
so part of: shcbp1
location: join(3733185..3733374,3735188..3735364,3736490..3736605,3738175..3738383,3748934..3749026,3750425..3750658,3752079..3752247,3752443..3752563,3762206..3762337,3764860..3764978,3766414..3766500,3768330..3768471,3773206..3773516)
location: region:3733185-3773516:1
so has part: feature:3733185-3733374:1:exon
so has part: feature:3735188-3735364:1:exon
so has part: feature:3736490-3736605:1:exon
so has part: feature:3738175-3738383:1:exon
so has part: feature:3748934-3749026:1:exon
so has part: feature:3750425-3750658:1:exon
so has part: feature:3752079-3752247:1:exon
so has part: feature:3752443-3752563:1:exon
so has part: feature:3762206-3762337:1:exon
so has part: feature:3764860-3764978:1:exon
so has part: feature:3766414-3766500:1:exon
so has part: feature:3768330-3768471:1:exon
so has part: feature:3773206-3773516:1:exon

XP_003222985.1
type: Protein
SIO_000068: ncbiprotein

position:3733185:1
position: 3733185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3773516:1
position: 3773516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733185-3733374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735188-3735364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3736490-3736605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738175-3738383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3748934-3749026:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3750425-3750658:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3752079-3752247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3752443-3752563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3762206-3762337:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3764860-3764978:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3766414-3766500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3768330-3768471:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3773206-3773516:1:exon

shcbp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: shcbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC SH2 domain-binding protein 1 isoform X2
translation: MAEPELERPLPGEEEEESPARSGAAEKEEEEEPRGDEAEGGPLPPASDGSSCGPEESNNALEPDEDSEDSECGSCSDLGSRDQPRTALQRHSLGSNALFPDTFQTNNLLFYERFKAYQDYMLADCKVSEVKEFTAEYLEKLLEPSGWRAVWRTNVFEVLVEVVDVEYSALKAVVRLCEPFLCETRESAFTQERMQELLELKEHRLLLQELWVVFDESGEFDQTALAIEHVRFFYKHIWRSWDEEDDDDFDYFVRCVEPRLRLHYDILEDRVPSALVAEYQSRLSQCEELYRKFLDFRNSISGTDSDSEAENVSVVEGMKLYERMEQLKQKLKLIENPLLRYVFGYQKHSGLKAKGERPSGTVVTHVVSSAMMSSLLQCLFRDKLSPDAFHEEIEIQFHRDPQSAVHACHEGDRVIVCPGHYVVEGALYIADSIELEGYGLPDDIVIEERGKADAFVECTGANVKISSLKLIQHDAVEGILSVHQGKTILENCVLQCETTGVAVRTSAEFLMKNSDLYGAKDFLNENYVIPKITMVNNVIHNNEGYGVVLVKPAVSPDVKENSLESAEGEKNGESAADAVIGECEEQHKQAGGAMDSYGGDAVSEPMEDNSEIANELSLASLKKNQANKKRLSSLRFTEADDGLMAQEMFVSIVGNQFKWNGKGSFGTFLY
SIO_010081: shcbp1
subclass of: SO_0000673
so part of: shcbp1
location: join(3733185..3733374,3735188..3735364,3736490..3736605,3738175..3738383,3748934..3749026,3750425..3750658,3752079..3752247,3752443..3752563,3762206..3762337,3764860..3764978,3768330..3768471,3773206..3773516)
location: region:3733185-3773516:1
so has part: feature:3733185-3733374:1:exon
so has part: feature:3735188-3735364:1:exon
so has part: feature:3736490-3736605:1:exon
so has part: feature:3738175-3738383:1:exon
so has part: feature:3748934-3749026:1:exon
so has part: feature:3750425-3750658:1:exon
so has part: feature:3752079-3752247:1:exon
so has part: feature:3752443-3752563:1:exon
so has part: feature:3762206-3762337:1:exon
so has part: feature:3764860-3764978:1:exon
so has part: feature:3768330-3768471:1:exon
so has part: feature:3773206-3773516:1:exon

XP_008112122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3733185-3733374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735188-3735364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3736490-3736605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738175-3738383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3748934-3749026:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3750425-3750658:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3752079-3752247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3752443-3752563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3762206-3762337:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3764860-3764978:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3768330-3768471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3773206-3773516:1:exon

shcbp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: shcbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC SH2 domain-binding protein 1 isoform X4
translation: MAEPELERPLPGEEEEESPARSGAAEKEEEEEPRGDEAEGGPLPPASDGSSCGPEESNNALEPDEDSEDSECGSCSDLGSRDQPRTALQRHSLGSNALFPDTFQTNNLLFYERFKAYQDYMLADCKVSEVKEFTAEYLEKLLEPSGWRAVWRTNVFEVLVEVVDVEYSALKAVVRLCEPFLCETRESAFTQERMQELLELKEHRLLLQELWVVFDESGEFDQTALAIEHVRFFYKHIWRSWDEEDDDDFDYFVRCVEPRLRLHYDILEDRVPSALVAEYQSRLSQCEELYRKFLDFRNSISGTDSDSEAENVSVVEGMKLYERMEQLKQKLKLIENPLLRYVFGYQKHSGLKAKGERPSGTVVTHVVSSAMMSSLLQCLFRDKLSPDAFHEEIEIQFHRDPQSAVHACHEGDRVIVCPGHYVVEGALYIADSIELEGVHQGKTILENCVLQCETTGVAVRTSAEFLMKNSDLYGAKGAGIEVYPGGTCTLIGNGIHHCKEGILIKDFLNENYVIPKITMVNNVIHNNEGYGVVLVKPAVSPDVKENSLESAEGEKNGESAADAVIGECEEQHKQAGGAMDSYGGDAVSEPMEDNSEIANELSLASLKKNQANKKRLSSLRFTEADDGLMAQEMFVSIVGNQFKWNGKGSFGTFLY
SIO_010081: shcbp1
subclass of: SO_0000673
so part of: shcbp1
location: join(3733185..3733374,3735188..3735364,3736490..3736605,3738175..3738383,3748934..3749026,3750425..3750658,3752079..3752247,3752443..3752563,3764860..3764978,3766414..3766500,3768330..3768471,3773206..3773516)
location: region:3733185-3773516:1
so has part: feature:3733185-3733374:1:exon
so has part: feature:3735188-3735364:1:exon
so has part: feature:3736490-3736605:1:exon
so has part: feature:3738175-3738383:1:exon
so has part: feature:3748934-3749026:1:exon
so has part: feature:3750425-3750658:1:exon
so has part: feature:3752079-3752247:1:exon
so has part: feature:3752443-3752563:1:exon
so has part: feature:3764860-3764978:1:exon
so has part: feature:3766414-3766500:1:exon
so has part: feature:3768330-3768471:1:exon
so has part: feature:3773206-3773516:1:exon

XP_008112123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3733185-3733374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735188-3735364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3736490-3736605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738175-3738383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3748934-3749026:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3750425-3750658:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3752079-3752247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3752443-3752563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3764860-3764978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3766414-3766500:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3768330-3768471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3773206-3773516:1:exon

shcbp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: shcbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC SH2 domain-binding protein 1 isoform X3
translation: MAEPELERPLPGEEEEESPARSGAAEKEEEEEPRGDEAEGGPLPPASDGSSCGPEESNNALEPDEDSEDSECGSCSDLGSRDQPRTALQRHSLGSNALFPDTFQTNNLLFYERFKAYQDYMLADCKVSEVKEFTAEYLEKLLEPSGWRAVWRTNVFEVLVEVVDVEYSALKAVVRLCEPFLCETRESAFTQERMQELLELKEHRLLLQELWVVFDESGEFDQTALAIEHVRHYDILEDRVPSALVAEYQSRLSQCEELYRKFLDFRNSISGTDSDSEAENVSVVEGMKLYERMEQLKQKLKLIENPLLRYVFGYQKHSGLKAKGERPSGTVVTHVVSSAMMSSLLQCLFRDKLSPDAFHEEIEIQFHRDPQSAVHACHEGDRVIVCPGHYVVEGALYIADSIELEGYGLPDDIVIEERGKADAFVECTGANVKISSLKLIQHDAVEGILSVHQGKTILENCVLQCETTGVAVRTSAEFLMKNSDLYGAKGAGIEVYPGGTCTLIGNGIHHCKEGILIKDFLNENYVIPKITMVNNVIHNNEGYGVVLVKPAVSPDVKENSLESAEGEKNGESAADAVIGECEEQHKQAGGAMDSYGGDAVSEPMEDNSEIANELSLASLKKNQANKKRLSSLRFTEADDGLMAQEMFVSIVGNQFKWNGKGSFGTFLY
SIO_010081: shcbp1
subclass of: SO_0000673
so part of: shcbp1
location: join(3733185..3733374,3735188..3735364,3736490..3736605,3738175..3738383,3750425..3750658,3752079..3752247,3752443..3752563,3762206..3762337,3764860..3764978,3766414..3766500,3768330..3768471,3773206..3773516)
location: region:3733185-3773516:1
so has part: feature:3733185-3733374:1:exon
so has part: feature:3735188-3735364:1:exon
so has part: feature:3736490-3736605:1:exon
so has part: feature:3738175-3738383:1:exon
so has part: feature:3750425-3750658:1:exon
so has part: feature:3752079-3752247:1:exon
so has part: feature:3752443-3752563:1:exon
so has part: feature:3762206-3762337:1:exon
so has part: feature:3764860-3764978:1:exon
so has part: feature:3766414-3766500:1:exon
so has part: feature:3768330-3768471:1:exon
so has part: feature:3773206-3773516:1:exon

XP_016850251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3733185-3733374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3735188-3735364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3736490-3736605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738175-3738383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3750425-3750658:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3752079-3752247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3752443-3752563:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3762206-3762337:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3764860-3764978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3766414-3766500:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3768330-3768471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3773206-3773516:1:exon

LOC107983038
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC107983038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4314324..4317685)
location: region:4314324-4317685:-1
so has part: feature:4314324-4317685:-1:exon
subclass of: SO_0000010

107983038
type: Gene
SIO_000068: ncbigene

position:4314324:-1
position: 4314324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4317685:-1
position: 4317685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4314324-4317685:-1:exon

LOC107983038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: LOC107983038
product: uncharacterized LOC107983038
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016994772.1
SIO_010081: LOC107983038
subclass of: SO_0000673
so part of: LOC107983038
location: complement(join(4314324..4315666,4317045..4317685))
location: region:4314324-4317685:-1
so has part: feature:4317045-4317685:-1:exon
so has part: feature:4314324-4315666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4317045-4317685:-1:exon

position:4317045:-1
position: 4317045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4314324-4315666:-1:exon

position:4315666:-1
position: 4315666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107983038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: LOC107983038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107983038
translation: MPRQGTSVFPTGLSGRSQMPGKGEFRVKFNRDPKQLSYFITNVRHFMEDFGDQFPSESAKIYTVGANLKEAAADWLMQMYDTSARELASLEDFLRALRERFEDPLAEERAKAQLKRIYQGGRTVSEYALEFKATPGKIRDWSDTTKLEYFRAGLRSEMLEWALHRGNPRDLEDWILLAGRVEVDQQQISRRPRESSRFKPPTAATRRFSPRRGSKSLSEHIKLTREVLRRLKENQLYAKLSKCEFHKTELDYLGFRISTKGIAMDPTKVQDVLAWEPPRTRRQLQGFLGFANFYRQFIKDFAKLSLPLTELLKTKGVGETRKTKMPGAKLNWTPECQEAFEELKRRFTSQPILVHAQLDKPFVVHCDASEAAYGAILLQADDEGALRPCAYLSRKFTETEWKWRVWEKEAFAVKSALSHWRHFWKELRSNLRYGLITRICKLYEPPKG
SIO_010081: LOC107983038
subclass of: SO_0000673
so part of: LOC107983038
location: complement(join(4314961..4315666,4317045..4317685))
location: region:4314961-4317685:-1
so has part: feature:4317045-4317685:-1:exon
so has part: feature:4314961-4315666:-1:exon

XP_016850261.1
type: Protein
SIO_000068: ncbiprotein

position:4314961:-1
position: 4314961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4317045-4317685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4314961-4315666:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 28377
estimated length: 1000
gap type: between scaffolds
so part of: sequence
location: 4696101..4697100
location: region:4696101-4697100:1
so has part: feature:4696101-4697100:1:region

position:4696101:1
position: 4696101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4697100:1
position: 4697100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4696101-4697100:1:region

maf
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: maf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4916030..4938916)
location: region:4916030-4938916:-1
so has part: feature:4916030-4938916:-1:exon
subclass of: SO_0000010

103279340
type: Gene
SIO_000068: ncbigene

position:4916030:-1
position: 4916030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4938916:-1
position: 4938916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4916030-4938916:-1:exon

maf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: maf
product: MAF bZIP transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_008113924.2
SIO_010081: maf
subclass of: SO_0000673
so part of: maf
location: complement(join(4916030..4916091,4937713..4938916))
location: region:4916030-4938916:-1
so has part: feature:4937713-4938916:-1:exon
so has part: feature:4916030-4916091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4937713-4938916:-1:exon

position:4937713:-1
position: 4937713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4916030-4916091:-1:exon

position:4916091:-1
position: 4916091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

maf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: maf
product: MAF bZIP transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008113923.2
SIO_010081: maf
subclass of: SO_0000673
so part of: maf
location: complement(join(4916030..4916091,4920725..4920775,4937713..4938916))
location: region:4916030-4938916:-1
so has part: feature:4937713-4938916:-1:exon
so has part: feature:4920725-4920775:-1:exon
so has part: feature:4916030-4916091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4937713-4938916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4920725-4920775:-1:exon

position:4920725:-1
position: 4920725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4920775:-1
position: 4920775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4916030-4916091:-1:exon

maf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: maf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Maf isoform X2
translation: MPSSELALGSNTGGAPDLPTSPLAMEYVNDFDLMKFEVKKEPLESERLISQCGRLIAGGSLSSTPMSTPCSSVPPSPSFSAPSPGSSGGGGGGGGGGGQGGGGAGHGGAGGNDQKGPLEDYYWMSGYPTQLNPEALAFSPEDAVEALISSSHHQLQSVARNAGFDGYNRGQPLGSNADEMGSAAAVVSAVIAAAAAQQQNGAQHYHHHHPHHHSSHHSSSAAAGNGLPPAHPHAGNASLPPAPVSSSSHSSSPFDDRFSDDQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKTQLLSQVEHLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSHDNSGSGASPSSPEFFMYPRDSSASVM
SIO_010081: maf
subclass of: SO_0000673
so part of: maf
location: complement(join(4916058..4916091,4937713..4938839))
location: region:4916058-4938839:-1
so has part: feature:4937713-4938839:-1:exon
so has part: feature:4916058-4916091:-1:exon

XP_008112131.1
type: Protein
SIO_000068: ncbiprotein

position:4916058:-1
position: 4916058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4938839:-1
position: 4938839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4937713-4938839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4916058-4916091:-1:exon

maf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: maf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Maf isoform X1
translation: MPSSELALGSNTGGAPDLPTSPLAMEYVNDFDLMKFEVKKEPLESERLISQCGRLIAGGSLSSTPMSTPCSSVPPSPSFSAPSPGSSGGGGGGGGGGGQGGGGAGHGGAGGNDQKGPLEDYYWMSGYPTQLNPEALAFSPEDAVEALISSSHHQLQSVARNAGFDGYNRGQPLGSNADEMGSAAAVVSAVIAAAAAQQQNGAQHYHHHHPHHHSSHHSSSAAAGNGLPPAHPHAGNASLPPAPVSSSSHSSSPFDDRFSDDQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKTQLLSQVEHLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSHDNSGSGASPSSPEFFIEKGPLAKSCQLHFAWLKYPRDSSASVM
SIO_010081: maf
subclass of: SO_0000673
so part of: maf
location: complement(join(4916058..4916091,4920725..4920775,4937713..4938839))
location: region:4916058-4938839:-1
so has part: feature:4937713-4938839:-1:exon
so has part: feature:4920725-4920775:-1:exon
so has part: feature:4916058-4916091:-1:exon

XP_008112130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4937713-4938839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4920725-4920775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4916058-4916091:-1:exon

dynlrb2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: dynlrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5521770..5529890
location: region:5521770-5529890:1
so has part: feature:5521770-5529890:1:exon
subclass of: SO_0000010

100565244
type: Gene
SIO_000068: ncbigene

position:5521770:1
position: 5521770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5529890:1
position: 5529890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5521770-5529890:1:exon

dynlrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: dynlrb2
product: dynein light chain roadblock-type 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_008113925.2
SIO_010081: dynlrb2
subclass of: SO_0000673
so part of: dynlrb2
location: join(5521770..5521901,5524881..5524956,5527676..5527843,5529628..5529890)
location: region:5521770-5529890:1
so has part: feature:5521770-5521901:1:exon
so has part: feature:5524881-5524956:1:exon
so has part: feature:5527676-5527843:1:exon
so has part: feature:5529628-5529890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5521770-5521901:1:exon

position:5521901:1
position: 5521901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5524881-5524956:1:exon

position:5524881:1
position: 5524881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5524956:1
position: 5524956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5527676-5527843:1:exon

position:5527676:1
position: 5527676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5527843:1
position: 5527843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5529628-5529890:1:exon

position:5529628:1
position: 5529628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dynlrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: dynlrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain roadblock-type 2
translation: MAEVEETLKRIQAHKGVIGTIIVNAEGIPIRTTLDNSTTVQYAGLLHQLTMKAKSTVRDIDPQNDLTFLRIRSKKHEIMVAPDKEYLLIVIQNPCE
SIO_010081: dynlrb2
subclass of: SO_0000673
so part of: dynlrb2
location: join(5521899..5521901,5524881..5524956,5527676..5527843,5529628..5529671)
location: region:5521899-5529671:1
so has part: feature:5521899-5521901:1:exon
so has part: feature:5524881-5524956:1:exon
so has part: feature:5527676-5527843:1:exon
so has part: feature:5529628-5529671:1:exon

XP_008112132.1
type: Protein
SIO_000068: ncbiprotein

position:5521899:1
position: 5521899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5529671:1
position: 5529671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5521899-5521901:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5524881-5524956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5527676-5527843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5529628-5529671:1:exon

cdyl2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: cdyl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5594661..5646382
location: region:5594661-5646382:1
so has part: feature:5594661-5646382:1:exon
subclass of: SO_0000010

100565440
type: Gene
SIO_000068: ncbigene

position:5594661:1
position: 5594661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5646382:1
position: 5646382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5594661-5646382:1:exon

cdyl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cdyl2
product: chromodomain protein, Y-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_008113928.1
SIO_010081: cdyl2
subclass of: SO_0000673
so part of: cdyl2
location: join(5594661..5594957,5620828..5621422,5633293..5633510,5634725..5634897,5637824..5638034,5639915..5640058,5644938..5646382)
location: region:5594661-5646382:1
so has part: feature:5594661-5594957:1:exon
so has part: feature:5620828-5621422:1:exon
so has part: feature:5633293-5633510:1:exon
so has part: feature:5634725-5634897:1:exon
so has part: feature:5637824-5638034:1:exon
so has part: feature:5639915-5640058:1:exon
so has part: feature:5644938-5646382:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5594661-5594957:1:exon

position:5594957:1
position: 5594957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5620828-5621422:1:exon

position:5620828:1
position: 5620828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5621422:1
position: 5621422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5633293-5633510:1:exon

position:5633293:1
position: 5633293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5633510:1
position: 5633510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5634725-5634897:1:exon

position:5634725:1
position: 5634725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5634897:1
position: 5634897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5637824-5638034:1:exon

position:5637824:1
position: 5637824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5638034:1
position: 5638034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5639915-5640058:1:exon

position:5639915:1
position: 5639915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5640058:1
position: 5640058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5644938-5646382:1:exon

position:5644938:1
position: 5644938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cdyl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cdyl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain Y-like protein 2
translation: MASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSNEDTWEPEHHLLHCEEFIDEFNGLHVTRERRAKHGKQASAPKFLRESRGSPLDKISHRPPDAGKSKGLSHKRKRMAPTFQKPRKGYASKPASSGDRAAKTVTYRTTPSGLQIMPLKKPHNGLPNGDTSYEKDTGHFGNGSQKPNMDLNEQEGEHDLPGVLDVNNESPVMNGIGSPLTNGSLNLHNTVKRKLEGEKDYVFDKRLRYSVRQNESNCRFRDIVVRKEDGFTHILLSSQTSDNNALTPEIMKEVRRALCNASADDSKLLLLSAVGSVFCSGLDYSYLIGRLSSDRRKESARIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFGQEVMLRVKEMASCSAVVLEESKCLVRSFLKSGLEDVNEKECQMLKQLWSSSKGLDSLFSYLQDKIYEV
SIO_010081: cdyl2
subclass of: SO_0000673
so part of: cdyl2
location: join(5594934..5594957,5620828..5621422,5633293..5633510,5634725..5634897,5637824..5638034,5639915..5640058,5644938..5645096)
location: region:5594934-5645096:1
so has part: feature:5594934-5594957:1:exon
so has part: feature:5620828-5621422:1:exon
so has part: feature:5633293-5633510:1:exon
so has part: feature:5634725-5634897:1:exon
so has part: feature:5637824-5638034:1:exon
so has part: feature:5639915-5640058:1:exon
so has part: feature:5644938-5645096:1:exon

XP_008112135.1
type: Protein
SIO_000068: ncbiprotein

position:5594934:1
position: 5594934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5645096:1
position: 5645096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5594934-5594957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5620828-5621422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5633293-5633510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5634725-5634897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5637824-5638034:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5639915-5640058:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5644938-5645096:1:exon

cmc2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: cmc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5659465..5665264)
location: region:5659465-5665264:-1
so has part: feature:5659465-5665264:-1:exon
subclass of: SO_0000010

100563085
type: Gene
SIO_000068: ncbigene

position:5659465:-1
position: 5659465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5665264:-1
position: 5665264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5659465-5665264:-1:exon

cmc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cmc2
product: C-x9-C motif containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016994763.1
SIO_010081: cmc2
subclass of: SO_0000673
so part of: cmc2
location: complement(join(5659465..5660164,5660948..5661019,5663323..5663393,5664242..5664293,5665120..5665264))
location: region:5659465-5665264:-1
so has part: feature:5665120-5665264:-1:exon
so has part: feature:5664242-5664293:-1:exon
so has part: feature:5663323-5663393:-1:exon
so has part: feature:5660948-5661019:-1:exon
so has part: feature:5659465-5660164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5665120-5665264:-1:exon

position:5665120:-1
position: 5665120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5664242-5664293:-1:exon

position:5664242:-1
position: 5664242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5664293:-1
position: 5664293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5663323-5663393:-1:exon

position:5663323:-1
position: 5663323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5663393:-1
position: 5663393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5660948-5661019:-1:exon

position:5660948:-1
position: 5660948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5661019:-1
position: 5661019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5659465-5660164:-1:exon

position:5660164:-1
position: 5660164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cmc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cmc2
product: C-x9-C motif containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_008113929.2
SIO_010081: cmc2
subclass of: SO_0000673
so part of: cmc2
location: complement(join(5659465..5660164,5660948..5661019,5663323..5663393,5664242..5664296,5665120..5665264))
location: region:5659465-5665264:-1
so has part: feature:5665120-5665264:-1:exon
so has part: feature:5664242-5664296:-1:exon
so has part: feature:5663323-5663393:-1:exon
so has part: feature:5660948-5661019:-1:exon
so has part: feature:5659465-5660164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5665120-5665264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5664242-5664296:-1:exon

position:5664296:-1
position: 5664296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5663323-5663393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5660948-5661019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5659465-5660164:-1:exon

cmc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cmc2
product: C-x9-C motif containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_003222949.3
SIO_010081: cmc2
subclass of: SO_0000673
so part of: cmc2
location: complement(join(5659465..5660164,5660948..5661019,5663323..5663447,5665120..5665262))
location: region:5659465-5665262:-1
so has part: feature:5665120-5665262:-1:exon
so has part: feature:5663323-5663447:-1:exon
so has part: feature:5660948-5661019:-1:exon
so has part: feature:5659465-5660164:-1:exon

position:5665262:-1
position: 5665262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5665120-5665262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5663323-5663447:-1:exon

position:5663447:-1
position: 5663447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5660948-5661019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5659465-5660164:-1:exon

cmc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cmc2
product: C-x9-C motif containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_003222950.3
SIO_010081: cmc2
subclass of: SO_0000673
so part of: cmc2
location: complement(join(5659465..5660164,5660948..5661019,5663323..5663393,5664242..5664285,5665120..5665260))
location: region:5659465-5665260:-1
so has part: feature:5665120-5665260:-1:exon
so has part: feature:5664242-5664285:-1:exon
so has part: feature:5663323-5663393:-1:exon
so has part: feature:5660948-5661019:-1:exon
so has part: feature:5659465-5660164:-1:exon

position:5665260:-1
position: 5665260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5665120-5665260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5664242-5664285:-1:exon

position:5664285:-1
position: 5664285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5663323-5663393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5660948-5661019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5659465-5660164:-1:exon

cmc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cmc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COX assembly mitochondrial protein 2 homolog isoform X1
translation: MNSDDYMSWSGCHLSPHLHSEECNMVIRLLKECHKEHSLLRFFGHCNHLDREMRRCLKKEYQDNRAKSRVHSENLREKLQKSPEH
SIO_010081: cmc2
subclass of: SO_0000673
so part of: cmc2
location: complement(join(5660087..5660164,5660948..5661019,5663323..5663393,5664242..5664278))
location: region:5660087-5664278:-1
so has part: feature:5664242-5664278:-1:exon
so has part: feature:5663323-5663393:-1:exon
so has part: feature:5660948-5661019:-1:exon
so has part: feature:5660087-5660164:-1:exon

XP_016850252.1
type: Protein
SIO_000068: ncbiprotein

position:5660087:-1
position: 5660087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5664278:-1
position: 5664278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5664242-5664278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5663323-5663393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5660948-5661019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5660087-5660164:-1:exon

cmc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cmc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COX assembly mitochondrial protein 2 homolog isoform X1
translation: MNSDDYMSWSGCHLSPHLHSEECNMVIRLLKECHKEHSLLRFFGHCNHLDREMRRCLKKEYQDNRAKSRVHSENLREKLQKSPEH
SIO_010081: cmc2
subclass of: SO_0000673
so part of: cmc2
location: complement(join(5660087..5660164,5660948..5661019,5663323..5663393,5664242..5664278))
location: region:5660087-5664278:-1
so has part: feature:5664242-5664278:-1:exon
so has part: feature:5663323-5663393:-1:exon
so has part: feature:5660948-5661019:-1:exon
so has part: feature:5660087-5660164:-1:exon

XP_003222998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5664242-5664278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5663323-5663393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5660948-5661019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5660087-5660164:-1:exon

cmc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cmc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COX assembly mitochondrial protein 2 homolog isoform X1
translation: MNSDDYMSWSGCHLSPHLHSEECNMVIRLLKECHKEHSLLRFFGHCNHLDREMRRCLKKEYQDNRAKSRVHSENLREKLQKSPEH
SIO_010081: cmc2
subclass of: SO_0000673
so part of: cmc2
location: complement(join(5660087..5660164,5660948..5661019,5663323..5663393,5664242..5664278))
location: region:5660087-5664278:-1
so has part: feature:5664242-5664278:-1:exon
so has part: feature:5663323-5663393:-1:exon
so has part: feature:5660948-5661019:-1:exon
so has part: feature:5660087-5660164:-1:exon

XP_008112136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5664242-5664278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5663323-5663393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5660948-5661019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5660087-5660164:-1:exon

cmc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cmc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COX assembly mitochondrial protein 2 homolog isoform X2
translation: MHPDLSPHLHSEECNMVIRLLKECHKEHSLLRFFGHCNHLDREMRRCLKKEYQDNRAKSRVHSENLREKLQKSPEH
SIO_010081: cmc2
subclass of: SO_0000673
so part of: cmc2
location: complement(join(5660087..5660164,5660948..5661019,5663323..5663403))
location: region:5660087-5663403:-1
so has part: feature:5663323-5663403:-1:exon
so has part: feature:5660948-5661019:-1:exon
so has part: feature:5660087-5660164:-1:exon

XP_003222997.1
type: Protein
SIO_000068: ncbiprotein

position:5663403:-1
position: 5663403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5663323-5663403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5660948-5661019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5660087-5660164:-1:exon

cenpn
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: cenpn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5665357..5678260
location: region:5665357-5678260:1
so has part: feature:5665357-5678260:1:exon
subclass of: SO_0000010

100563416
type: Gene
SIO_000068: ncbigene

position:5665357:1
position: 5665357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5678260:1
position: 5678260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5665357-5678260:1:exon

cenpn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cenpn
product: centromere protein N, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_008113930.1
SIO_010081: cenpn
subclass of: SO_0000673
so part of: cenpn
location: join(5665357..5665511,5667707..5667887,5669844..5669889,5671512..5671571,5672464..5672558,5672959..5673135,5673436..5673537,5675148..5675205,5675423..5675535,5676944..5677067,5677646..5678260)
location: region:5665357-5678260:1
so has part: feature:5665357-5665511:1:exon
so has part: feature:5667707-5667887:1:exon
so has part: feature:5669844-5669889:1:exon
so has part: feature:5671512-5671571:1:exon
so has part: feature:5672464-5672558:1:exon
so has part: feature:5672959-5673135:1:exon
so has part: feature:5673436-5673537:1:exon
so has part: feature:5675148-5675205:1:exon
so has part: feature:5675423-5675535:1:exon
so has part: feature:5676944-5677067:1:exon
so has part: feature:5677646-5678260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5665357-5665511:1:exon

position:5665511:1
position: 5665511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5667707-5667887:1:exon

position:5667707:1
position: 5667707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5667887:1
position: 5667887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5669844-5669889:1:exon

position:5669844:1
position: 5669844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5669889:1
position: 5669889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5671512-5671571:1:exon

position:5671512:1
position: 5671512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5671571:1
position: 5671571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5672464-5672558:1:exon

position:5672464:1
position: 5672464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5672558:1
position: 5672558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5672959-5673135:1:exon

position:5672959:1
position: 5672959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5673135:1
position: 5673135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5673436-5673537:1:exon

position:5673436:1
position: 5673436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5673537:1
position: 5673537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5675148-5675205:1:exon

position:5675148:1
position: 5675148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5675205:1
position: 5675205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5675423-5675535:1:exon

position:5675423:1
position: 5675423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5675535:1
position: 5675535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5676944-5677067:1:exon

position:5676944:1
position: 5676944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5677067:1
position: 5677067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5677646-5678260:1:exon

position:5677646:1
position: 5677646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cenpn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cenpn
product: centromere protein N, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_003222951.2
SIO_010081: cenpn
subclass of: SO_0000673
so part of: cenpn
location: join(5665357..5665511,5667707..5667887,5669844..5669889,5671512..5671571,5672482..5672558,5672959..5673135,5673436..5673537,5675148..5675205,5675423..5675535,5676944..5677067,5677646..5678260)
location: region:5665357-5678260:1
so has part: feature:5665357-5665511:1:exon
so has part: feature:5667707-5667887:1:exon
so has part: feature:5669844-5669889:1:exon
so has part: feature:5671512-5671571:1:exon
so has part: feature:5672482-5672558:1:exon
so has part: feature:5672959-5673135:1:exon
so has part: feature:5673436-5673537:1:exon
so has part: feature:5675148-5675205:1:exon
so has part: feature:5675423-5675535:1:exon
so has part: feature:5676944-5677067:1:exon
so has part: feature:5677646-5678260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5665357-5665511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5667707-5667887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5669844-5669889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5671512-5671571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5672482-5672558:1:exon

position:5672482:1
position: 5672482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5672959-5673135:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5673436-5673537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5675148-5675205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5675423-5675535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5676944-5677067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5677646-5678260:1:exon

cenpn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cenpn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein N isoform X1
translation: MAKKRPRESPRQNPPVKVFIMDVTVAEYIRRTVLRIPRSETRTMLTRWKFLSDSQLQSLNTNQKKEDISREVVELCQENCATITHAADLDMIYSYTYRDKMLWDVYQMIREEDLLYLAGDENDFFDLANFTKKFEESLRSSFKNVTITFKEFEDNSIWIRVAWGAQYRKPNQYKPSYVVYHSQTPYVFICKSINKSSMPLLFQALLVAANYSDIHEMDLRSRCLDSLKDIVFKRCSKSFPTHHLQPLQEKNSNLENVDPRIIREDKHEKERIQRIDRETFGDGPQPKLEFAQYRLKTTFRGDLINDILPNIEPFRCTVKFSSPHLLEALRSLAPAGIADAPLSPLLTCITQKARNHFNIREREGAHSKNSPGQGRIYK
SIO_010081: cenpn
subclass of: SO_0000673
so part of: cenpn
location: join(5665462..5665511,5667707..5667887,5669844..5669889,5671512..5671571,5672464..5672558,5672959..5673135,5673436..5673537,5675148..5675205,5675423..5675535,5676944..5677067,5677646..5677776)
location: region:5665462-5677776:1
so has part: feature:5665462-5665511:1:exon
so has part: feature:5667707-5667887:1:exon
so has part: feature:5669844-5669889:1:exon
so has part: feature:5671512-5671571:1:exon
so has part: feature:5672464-5672558:1:exon
so has part: feature:5672959-5673135:1:exon
so has part: feature:5673436-5673537:1:exon
so has part: feature:5675148-5675205:1:exon
so has part: feature:5675423-5675535:1:exon
so has part: feature:5676944-5677067:1:exon
so has part: feature:5677646-5677776:1:exon

XP_008112137.1
type: Protein
SIO_000068: ncbiprotein

position:5665462:1
position: 5665462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5677776:1
position: 5677776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5665462-5665511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5667707-5667887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5669844-5669889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5671512-5671571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5672464-5672558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5672959-5673135:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5673436-5673537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5675148-5675205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5675423-5675535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5676944-5677067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5677646-5677776:1:exon

cenpn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cenpn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein N isoform X2
translation: MAKKRPRESPRQNPPVKVFIMDVTVAEYIRRTVLRIPRSETRTMLTRWKFLSDSQLQSLNTNQKKEDISREVVELCQENCATITHAADLDMIYSYTYRDKMLWDVYQMIREEGDENDFFDLANFTKKFEESLRSSFKNVTITFKEFEDNSIWIRVAWGAQYRKPNQYKPSYVVYHSQTPYVFICKSINKSSMPLLFQALLVAANYSDIHEMDLRSRCLDSLKDIVFKRCSKSFPTHHLQPLQEKNSNLENVDPRIIREDKHEKERIQRIDRETFGDGPQPKLEFAQYRLKTTFRGDLINDILPNIEPFRCTVKFSSPHLLEALRSLAPAGIADAPLSPLLTCITQKARNHFNIREREGAHSKNSPGQGRIYK
SIO_010081: cenpn
subclass of: SO_0000673
so part of: cenpn
location: join(5665462..5665511,5667707..5667887,5669844..5669889,5671512..5671571,5672482..5672558,5672959..5673135,5673436..5673537,5675148..5675205,5675423..5675535,5676944..5677067,5677646..5677776)
location: region:5665462-5677776:1
so has part: feature:5665462-5665511:1:exon
so has part: feature:5667707-5667887:1:exon
so has part: feature:5669844-5669889:1:exon
so has part: feature:5671512-5671571:1:exon
so has part: feature:5672482-5672558:1:exon
so has part: feature:5672959-5673135:1:exon
so has part: feature:5673436-5673537:1:exon
so has part: feature:5675148-5675205:1:exon
so has part: feature:5675423-5675535:1:exon
so has part: feature:5676944-5677067:1:exon
so has part: feature:5677646-5677776:1:exon

XP_003222999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5665462-5665511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5667707-5667887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5669844-5669889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5671512-5671571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5672482-5672558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5672959-5673135:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5673436-5673537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5675148-5675205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5675423-5675535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5676944-5677067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5677646-5677776:1:exon

atmin
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: atmin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5681417..5690979
location: region:5681417-5690979:1
so has part: feature:5681417-5690979:1:exon
subclass of: SO_0000010

100565641
type: Gene
SIO_000068: ncbigene

position:5681417:1
position: 5681417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5690979:1
position: 5690979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5681417-5690979:1:exon

atmin
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: atmin
product: ATM interactor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_003222963.3
SIO_010081: atmin
subclass of: SO_0000673
so part of: atmin
location: join(5681417..5681706,5683666..5683791,5685179..5685378,5686165..5690979)
location: region:5681417-5690979:1
so has part: feature:5681417-5681706:1:exon
so has part: feature:5683666-5683791:1:exon
so has part: feature:5685179-5685378:1:exon
so has part: feature:5686165-5690979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5681417-5681706:1:exon

position:5681706:1
position: 5681706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5683666-5683791:1:exon

position:5683666:1
position: 5683666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5683791:1
position: 5683791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5685179-5685378:1:exon

position:5685179:1
position: 5685179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5685378:1
position: 5685378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5686165-5690979:1:exon

position:5686165:1
position: 5686165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

atmin
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 28377
gene: atmin
product: ATM interactor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_506714.2
SIO_010081: atmin
so part of: atmin
location: join(5681417..5681706,5683666..5683791,5685179..5685378,5686165..5690025,5690111..5690979)
location: region:5681417-5690979:1
so has part: feature:5681417-5681706:1:exon
so has part: feature:5683666-5683791:1:exon
so has part: feature:5685179-5685378:1:exon
so has part: feature:5686165-5690025:1:exon
so has part: feature:5690111-5690979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5681417-5681706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5683666-5683791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5685179-5685378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5686165-5690025:1:exon

position:5690025:1
position: 5690025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5690111-5690979:1:exon

position:5690111:1
position: 5690111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

atmin
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: atmin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATM interactor
translation: MAAAARSLSRRGVGLGRPPRRGEPPSSSASSPLDIVRPSVAELSRAVRSHIPCSVPGCGKVLPNPPALSMHLSKAHRLLPPQDGKINPAVRKDLKTPQKYYCCPIEGCPRGPQRPFSQFSLVRQHFMKMHAEKKHKCDKCSNSYGTVWDLKRHVEDCGKTFQCTCGCPYASRTALLSHIYRTQHEIPAEHRDPPSKKRKLETSISSQLLREKVKEASANIQIEYTRSNDFETSEIKPAASFEDSSHSCTTKQTQTQPKNAPKLLLPKPKVALVKLPVMQLTHLPVFVSAPDSSVKPVVVTVDNKGSVMNTVHLMPLPVVFMVPALETETHALKSSLPFSKTKNTGSMEPVSTGVQVNLGKVTPSGNAIQDLEAICYKNGICSTNVQTDLSYISQNFVPSGAWPADSSVSSCSQTDLTFSSQVLLPISVQTQTLLPCSKLTSSIAAQTDTLAQACFQSGVISRETQTNRSQKDKDGRAQMDQSVMCNDIFDSISSPFNNASPVALPGPNLVSAGLGQSLLQRGSCRSLNQDTKCEPIISFSAQNNILPQQVMTDNQTQTMELLNDLETIFSSNTAGQPLDNRTLLADTNSNSTTPLPSGSAQNAGIDFDIEDFFTASNIQTQTEETKLDNLSSEPVLESLDIETQTDLFSDDVIQSYNCRNNPSFLALEMFDTQTQTDLNFFLDSPYLSLGSILKQSAFSMSTDSSDTETQTEMQFSERSASNQMAECKVELSSAETQTMDSCFETLGSLFLTSNETQTAMDDFLLADLAWNTMESQFSSVETQTCAELCSLFQSTDKTSQ
SIO_010081: atmin
subclass of: SO_0000673
so part of: atmin
location: join(5681461..5681706,5683666..5683791,5685179..5685378,5686165..5687995)
location: region:5681461-5687995:1
so has part: feature:5681461-5681706:1:exon
so has part: feature:5683666-5683791:1:exon
so has part: feature:5685179-5685378:1:exon
so has part: feature:5686165-5687995:1:exon

XP_003223011.1
type: Protein
SIO_000068: ncbiprotein

position:5681461:1
position: 5681461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5687995:1
position: 5687995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5681461-5681706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5683666-5683791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5685179-5685378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5686165-5687995:1:exon

cch16orf46
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: cch16orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5693976..5704097)
location: region:5693976-5704097:-1
so has part: feature:5693976-5704097:-1:exon
subclass of: SO_0000010

100565836
type: Gene
SIO_000068: ncbigene

position:5693976:-1
position: 5693976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5704097:-1
position: 5704097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5693976-5704097:-1:exon

cch16orf46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cch16orf46
product: chromosome c open reading frame, human C16orf46, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016994767.1
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5693976..5694840,5698931..5700028,5703527..5704097))
location: region:5693976-5704097:-1
so has part: feature:5703527-5704097:-1:exon
so has part: feature:5698931-5700028:-1:exon
so has part: feature:5693976-5694840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5703527-5704097:-1:exon

position:5703527:-1
position: 5703527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5698931-5700028:-1:exon

position:5698931:-1
position: 5698931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5700028:-1
position: 5700028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5693976-5694840:-1:exon

position:5694840:-1
position: 5694840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cch16orf46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cch16orf46
product: chromosome c open reading frame, human C16orf46, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016994766.1
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5693976..5694840,5698931..5700028,5700800..5700832,5703527..5704097))
location: region:5693976-5704097:-1
so has part: feature:5703527-5704097:-1:exon
so has part: feature:5700800-5700832:-1:exon
so has part: feature:5698931-5700028:-1:exon
so has part: feature:5693976-5694840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5703527-5704097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5700800-5700832:-1:exon

position:5700800:-1
position: 5700800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5700832:-1
position: 5700832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5698931-5700028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5693976-5694840:-1:exon

cch16orf46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cch16orf46
product: chromosome c open reading frame, human C16orf46, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016994765.1
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5693977..5694840,5698931..5700028,5700587..5700832,5703502..5704096))
location: region:5693977-5704096:-1
so has part: feature:5703502-5704096:-1:exon
so has part: feature:5700587-5700832:-1:exon
so has part: feature:5698931-5700028:-1:exon
so has part: feature:5693977-5694840:-1:exon

position:5693977:-1
position: 5693977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5704096:-1
position: 5704096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5703502-5704096:-1:exon

position:5703502:-1
position: 5703502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5700587-5700832:-1:exon

position:5700587:-1
position: 5700587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5698931-5700028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5693977-5694840:-1:exon

cch16orf46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cch16orf46
product: chromosome c open reading frame, human C16orf46, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016994764.1
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5693977..5694840,5698931..5700028,5700587..5700832,5703527..5704095))
location: region:5693977-5704095:-1
so has part: feature:5703527-5704095:-1:exon
so has part: feature:5700587-5700832:-1:exon
so has part: feature:5698931-5700028:-1:exon
so has part: feature:5693977-5694840:-1:exon

position:5704095:-1
position: 5704095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5703527-5704095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5700587-5700832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5698931-5700028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5693977-5694840:-1:exon

cch16orf46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cch16orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C16orf46 homolog isoform X1
translation: MTSSEQKQNKIDSERSAANTRNAEIELCCTYPSERRERNQIYILLNISNSVNEQEEKSFDYVNGTGWEDAVQGWIKTAPFAQLQLQKRARKARTSESVSGCLYCSDLMQVIDKGLDQDSKITDQLKSDFRSSKCAATDNIPQKQQTLLSASTSITPPSAVDDIKKESYYGKIHSIQTPQEEKARMILKDVPPSLNERKFFLMKESSVLQVEKKAVPIKEFNILSPGKFKSIEAQKYKDIKNSDPLACNQVGSEAPAMKPSLVLPPLKDAALKNNSLDPSPKKSKTALSQASETTFHAVSETISSAQFFKTKEQKFEKRIGSILDAVKEQIKMQEVASLFPRLSKTSFFSRNLDQSYWPCAFLPDRKVAAVSNSIAMRRNKHPNSMHFLHTKGLQVSKASEIRDPCTGSRSHSGTNQGNGSKPQEIPVLSGLFPSLTEQGWGRATPFACCKISKKPRRNKILPRICHQKITSSLKKNMDWVDQLGSKKQKNHDKFPKIETISSNQEIGVASIKPYKMTTNSEREIMRKKLNSIQTLLGEEKTLPIKEYEINYSKQWTRPKVMRHKETNLSKVIHSNLSYITLNALLVFRQDEFGVINIHLEPPLNNEATAAKRTKREDATPDEMVSHRPATKKVKPKNRKKIGMNNVVEKSNTKIMYHSLICPQDSGILSFSEICWVFSVA
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5694106..5694840,5698931..5700028,5700587..5700796))
location: region:5694106-5700796:-1
so has part: feature:5700587-5700796:-1:exon
so has part: feature:5698931-5700028:-1:exon
so has part: feature:5694106-5694840:-1:exon

XP_016850253.1
type: Protein
SIO_000068: ncbiprotein

position:5694106:-1
position: 5694106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5700796:-1
position: 5700796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5700587-5700796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5698931-5700028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5694106-5694840:-1:exon

cch16orf46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cch16orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C16orf46 homolog isoform X1
translation: MTSSEQKQNKIDSERSAANTRNAEIELCCTYPSERRERNQIYILLNISNSVNEQEEKSFDYVNGTGWEDAVQGWIKTAPFAQLQLQKRARKARTSESVSGCLYCSDLMQVIDKGLDQDSKITDQLKSDFRSSKCAATDNIPQKQQTLLSASTSITPPSAVDDIKKESYYGKIHSIQTPQEEKARMILKDVPPSLNERKFFLMKESSVLQVEKKAVPIKEFNILSPGKFKSIEAQKYKDIKNSDPLACNQVGSEAPAMKPSLVLPPLKDAALKNNSLDPSPKKSKTALSQASETTFHAVSETISSAQFFKTKEQKFEKRIGSILDAVKEQIKMQEVASLFPRLSKTSFFSRNLDQSYWPCAFLPDRKVAAVSNSIAMRRNKHPNSMHFLHTKGLQVSKASEIRDPCTGSRSHSGTNQGNGSKPQEIPVLSGLFPSLTEQGWGRATPFACCKISKKPRRNKILPRICHQKITSSLKKNMDWVDQLGSKKQKNHDKFPKIETISSNQEIGVASIKPYKMTTNSEREIMRKKLNSIQTLLGEEKTLPIKEYEINYSKQWTRPKVMRHKETNLSKVIHSNLSYITLNALLVFRQDEFGVINIHLEPPLNNEATAAKRTKREDATPDEMVSHRPATKKVKPKNRKKIGMNNVVEKSNTKIMYHSLICPQDSGILSFSEICWVFSVA
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5694106..5694840,5698931..5700028,5700587..5700796))
location: region:5694106-5700796:-1
so has part: feature:5700587-5700796:-1:exon
so has part: feature:5698931-5700028:-1:exon
so has part: feature:5694106-5694840:-1:exon

XP_016850254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5700587-5700796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5698931-5700028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5694106-5694840:-1:exon

cch16orf46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cch16orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C16orf46 homolog isoform X2
translation: MQVIDKGLDQDSKITDQLKSDFRSSKCAATDNIPQKQQTLLSASTSITPPSAVDDIKKESYYGKIHSIQTPQEEKARMILKDVPPSLNERKFFLMKESSVLQVEKKAVPIKEFNILSPGKFKSIEAQKYKDIKNSDPLACNQVGSEAPAMKPSLVLPPLKDAALKNNSLDPSPKKSKTALSQASETTFHAVSETISSAQFFKTKEQKFEKRIGSILDAVKEQIKMQEVASLFPRLSKTSFFSRNLDQSYWPCAFLPDRKVAAVSNSIAMRRNKHPNSMHFLHTKGLQVSKASEIRDPCTGSRSHSGTNQGNGSKPQEIPVLSGLFPSLTEQGWGRATPFACCKISKKPRRNKILPRICHQKITSSLKKNMDWVDQLGSKKQKNHDKFPKIETISSNQEIGVASIKPYKMTTNSEREIMRKKLNSIQTLLGEEKTLPIKEYEINYSKQWTRPKVMRHKETNLSKVIHSNLSYITLNALLVFRQDEFGVINIHLEPPLNNEATAAKRTKREDATPDEMVSHRPATKKVKPKNRKKIGMNNVVEKSNTKIMYHSLICPQDSGILSFSEICWVFSVA
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5694106..5694840,5698931..5699917))
location: region:5694106-5699917:-1
so has part: feature:5698931-5699917:-1:exon
so has part: feature:5694106-5694840:-1:exon

XP_016850255.1
type: Protein
SIO_000068: ncbiprotein

position:5699917:-1
position: 5699917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5698931-5699917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5694106-5694840:-1:exon

cch16orf46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cch16orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C16orf46 homolog isoform X2
translation: MQVIDKGLDQDSKITDQLKSDFRSSKCAATDNIPQKQQTLLSASTSITPPSAVDDIKKESYYGKIHSIQTPQEEKARMILKDVPPSLNERKFFLMKESSVLQVEKKAVPIKEFNILSPGKFKSIEAQKYKDIKNSDPLACNQVGSEAPAMKPSLVLPPLKDAALKNNSLDPSPKKSKTALSQASETTFHAVSETISSAQFFKTKEQKFEKRIGSILDAVKEQIKMQEVASLFPRLSKTSFFSRNLDQSYWPCAFLPDRKVAAVSNSIAMRRNKHPNSMHFLHTKGLQVSKASEIRDPCTGSRSHSGTNQGNGSKPQEIPVLSGLFPSLTEQGWGRATPFACCKISKKPRRNKILPRICHQKITSSLKKNMDWVDQLGSKKQKNHDKFPKIETISSNQEIGVASIKPYKMTTNSEREIMRKKLNSIQTLLGEEKTLPIKEYEINYSKQWTRPKVMRHKETNLSKVIHSNLSYITLNALLVFRQDEFGVINIHLEPPLNNEATAAKRTKREDATPDEMVSHRPATKKVKPKNRKKIGMNNVVEKSNTKIMYHSLICPQDSGILSFSEICWVFSVA
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5694106..5694840,5698931..5699917))
location: region:5694106-5699917:-1
so has part: feature:5698931-5699917:-1:exon
so has part: feature:5694106-5694840:-1:exon

XP_016850256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5698931-5699917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5694106-5694840:-1:exon

cch16orf46
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 28377
gene: cch16orf46
product: chromosome c open reading frame, human C16orf46, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001730488.1
SIO_010081: cch16orf46
so part of: cch16orf46
location: complement(join(5694322..5694840,5697782..5697881,5699372..5700028,5700587..5700832,5703527..5704088))
location: region:5694322-5704088:-1
so has part: feature:5703527-5704088:-1:exon
so has part: feature:5700587-5700832:-1:exon
so has part: feature:5699372-5700028:-1:exon
so has part: feature:5697782-5697881:-1:exon
so has part: feature:5694322-5694840:-1:exon

position:5694322:-1
position: 5694322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5704088:-1
position: 5704088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5703527-5704088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5700587-5700832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5699372-5700028:-1:exon

position:5699372:-1
position: 5699372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5697782-5697881:-1:exon

position:5697782:-1
position: 5697782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5697881:-1
position: 5697881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5694322-5694840:-1:exon

cch16orf46
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 28377
gene: cch16orf46
product: chromosome c open reading frame, human C16orf46, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001730487.1
SIO_010081: cch16orf46
so part of: cch16orf46
location: complement(join(5694545..5694840,5697782..5697881,5698931..5700028,5700587..5700832,5703527..5704093))
location: region:5694545-5704093:-1
so has part: feature:5703527-5704093:-1:exon
so has part: feature:5700587-5700832:-1:exon
so has part: feature:5698931-5700028:-1:exon
so has part: feature:5697782-5697881:-1:exon
so has part: feature:5694545-5694840:-1:exon

position:5694545:-1
position: 5694545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5704093:-1
position: 5704093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5703527-5704093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5700587-5700832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5698931-5700028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5697782-5697881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5694545-5694840:-1:exon

cch16orf46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: cch16orf46
product: chromosome c open reading frame, human C16orf46, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_008113936.2
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5694756..5694840,5697782..5697881,5699392..5700028,5700587..5700832,5703527..5704089))
location: region:5694756-5704089:-1
so has part: feature:5703527-5704089:-1:exon
so has part: feature:5700587-5700832:-1:exon
so has part: feature:5699392-5700028:-1:exon
so has part: feature:5697782-5697881:-1:exon
so has part: feature:5694756-5694840:-1:exon

position:5694756:-1
position: 5694756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5704089:-1
position: 5704089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5703527-5704089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5700587-5700832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5699392-5700028:-1:exon

position:5699392:-1
position: 5699392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5697782-5697881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5694756-5694840:-1:exon

cch16orf46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: cch16orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C16orf46 homolog isoform X3
translation: MTSSEQKQNKIDSERSAANTRNAEIELCCTYPSERRERNQIYILLNISNSVNEQEEKSFDYVNGTGWEDAVQGWIKTAPFAQLQLQKRARKARTSESVSGCLYCSDLMQVIDKGLDQDSKITDQLKSDFRSSKCAATDNIPQKQQTLLSASTSITPPSAVDDIKKESYYGKIHSIQTPQEEKARMILKDVPPSLNERKFFLMKESSVLQVEKKAVPIKEFNILSPGKFKSIEAQKYKDIKNSDPLACNQVGSEAPAMKPSLVLPPLKDAALKNNSLDPSPKKMTARSSVFQPKRLSCQHLP
SIO_010081: cch16orf46
subclass of: SO_0000673
so part of: cch16orf46
location: complement(join(5697823..5697881,5699392..5700028,5700587..5700796))
location: region:5697823-5700796:-1
so has part: feature:5700587-5700796:-1:exon
so has part: feature:5699392-5700028:-1:exon
so has part: feature:5697823-5697881:-1:exon

XP_008112143.1
type: Protein
SIO_000068: ncbiprotein

position:5697823:-1
position: 5697823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5700587-5700796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5699392-5700028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5697823-5697881:-1:exon

LOC103279341
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: LOC103279341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5708069..5709715
location: region:5708069-5709715:1
so has part: feature:5708069-5709715:1:exon
subclass of: SO_0000010

103279341
type: Gene
SIO_000068: ncbigene

position:5708069:1
position: 5708069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5709715:1
position: 5709715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5708069-5709715:1:exon

LOC103279341
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: LOC103279341
product: protein phosphatase 1 regulatory subunit 3E-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008113937.2
SIO_010081: LOC103279341
subclass of: SO_0000673
so part of: LOC103279341
location: 5708069..5709715
location: region:5708069-5709715:1
so has part: feature:5708069-5709715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5708069-5709715:1:exon

LOC103279341
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: LOC103279341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 3E-like
translation: MEKAGSLHASVPTPPLRLYLPRHFSCSACKGGCSPEPEPLEAAPNEEEEDEEEEEPEPPPPRSPSPPSSPSPSRGREPTLPPVPPQPHAPPPRQVPAPRPGERGLRPALQHQSPSRRKTVRFADALGLELTAVRHFSQQDVPRVPSPPPLTASPFPFFSSADLFKTRKPPTLGDLEPVLFGPPASILEPLFPPAPGSSAGFVERVKQGKVKLEWVRAEAGGLRGAIRVLNLAYEKAVSVRYTLNRWASCSEVPAAFQAPPSSSSSDGALDRFTFLLPVGPGATQLEFALRYRVAGAEFWDNNGGRNYRMRGRQRTPAAPGNEPDGSAGAWIHFI
SIO_010081: LOC103279341
subclass of: SO_0000673
so part of: LOC103279341
location: 5708616..5709620
location: region:5708616-5709620:1
so has part: feature:5708616-5709620:1:exon

XP_008112144.1
type: Protein
SIO_000068: ncbiprotein

position:5708616:1
position: 5708616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5709620:1
position: 5709620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5708616-5709620:1:exon

gcsh
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: gcsh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5730418..5742681)
location: region:5730418-5742681:-1
so has part: feature:5730418-5742681:-1:exon
subclass of: SO_0000010

100566038
type: Gene
SIO_000068: ncbigene

position:5730418:-1
position: 5730418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5742681:-1
position: 5742681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5730418-5742681:-1:exon

gcsh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: gcsh
product: glycine cleavage system protein H
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_008113938.2
SIO_010081: gcsh
subclass of: SO_0000673
so part of: gcsh
location: complement(join(5730418..5731181,5732925..5733056,5734493..5734556,5736299..5736378,5742445..5742681))
location: region:5730418-5742681:-1
so has part: feature:5742445-5742681:-1:exon
so has part: feature:5736299-5736378:-1:exon
so has part: feature:5734493-5734556:-1:exon
so has part: feature:5732925-5733056:-1:exon
so has part: feature:5730418-5731181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5742445-5742681:-1:exon

position:5742445:-1
position: 5742445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5736299-5736378:-1:exon

position:5736299:-1
position: 5736299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5736378:-1
position: 5736378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5734493-5734556:-1:exon

position:5734493:-1
position: 5734493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5734556:-1
position: 5734556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5732925-5733056:-1:exon

position:5732925:-1
position: 5732925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5733056:-1
position: 5733056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5730418-5731181:-1:exon

position:5731181:-1
position: 5731181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gcsh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: gcsh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycine cleavage system H protein, mitochondrial
translation: MAVAAAWRALHRALPGSLPPKAFRGLCPLPRARPLSTSAALQLAAVRRFTDKHEWVSVENSIGTVGISNFAQEALGDVVYCSLPEIGTKLNKQDEFGALESVKAASELYSPLTGEVTEINTALADNPGLVNKSCYQDGWLIKMTVDNPSECDELMSEEAYEKYIKSIEE
SIO_010081: gcsh
subclass of: SO_0000673
so part of: gcsh
location: complement(join(5731084..5731181,5732925..5733056,5734493..5734556,5736299..5736378,5742445..5742580))
location: region:5731084-5742580:-1
so has part: feature:5742445-5742580:-1:exon
so has part: feature:5736299-5736378:-1:exon
so has part: feature:5734493-5734556:-1:exon
so has part: feature:5732925-5733056:-1:exon
so has part: feature:5731084-5731181:-1:exon

XP_008112145.1
type: Protein
SIO_000068: ncbiprotein

position:5731084:-1
position: 5731084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5742580:-1
position: 5742580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5742445-5742580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5736299-5736378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5734493-5734556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5732925-5733056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5731084-5731181:-1:exon

pkd1l2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: pkd1l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5745038..5791657)
location: region:5745038-5791657:-1
so has part: feature:5745038-5791657:-1:exon
subclass of: SO_0000010

100566237
type: Gene
SIO_000068: ncbigene

position:5745038:-1
position: 5745038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5791657:-1
position: 5791657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5745038-5791657:-1:exon

pkd1l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 28377
gene: pkd1l2
product: polycystin 1 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008113953.2
SIO_010081: pkd1l2
subclass of: SO_0000673
so part of: pkd1l2
location: complement(join(5745038..5745429,5745561..5745692,5749136..5749237,5749942..5750152,5751963..5752123,5752352..5752479,5752786..5752919,5753756..5754083,5754376..5754561,5755653..5755793,5758179..5758275,5758637..5758868,5759703..5759925,5760796..5761012,5761382..5761602,5761969..5762168,5762977..5763123,5764679..5764857,5766264..5766365,5767428..5767658,5768254..5768447,5769588..5769813,5770768..5770899,5771243..5771369,5771952..5772076,5772625..5772807,5773204..5773329,5773648..5773842,5774566..5774711,5775936..5776136,5777234..5777375,5778523..5778643,5779348..5779555,5780234..5780351,5780848..5780888,5781697..5781795,5783461..5783865,5784701..5784930,5785372..5785519,5787232..5787342,5787985..5788170,5789354..5789518,5791088..5791657))
location: region:5745038-5791657:-1
so has part: feature:5791088-5791657:-1:exon
so has part: feature:5789354-5789518:-1:exon
so has part: feature:5787985-5788170:-1:exon
so has part: feature:5787232-5787342:-1:exon
so has part: feature:5785372-5785519:-1:exon
so has part: feature:5784701-5784930:-1:exon
so has part: feature:5783461-5783865:-1:exon
so has part: feature:5781697-5781795:-1:exon
so has part: feature:5780848-5780888:-1:exon
so has part: feature:5780234-5780351:-1:exon
so has part: feature:5779348-5779555:-1:exon
so has part: feature:5778523-5778643:-1:exon
so has part: feature:5777234-5777375:-1:exon
so has part: feature:5775936-5776136:-1:exon
so has part: feature:5774566-5774711:-1:exon
so has part: feature:5773648-5773842:-1:exon
so has part: feature:5773204-5773329:-1:exon
so has part: feature:5772625-5772807:-1:exon
so has part: feature:5771952-5772076:-1:exon
so has part: feature:5771243-5771369:-1:exon
so has part: feature:5770768-5770899:-1:exon
so has part: feature:5769588-5769813:-1:exon
so has part: feature:5768254-5768447:-1:exon
so has part: feature:5767428-5767658:-1:exon
so has part: feature:5766264-5766365:-1:exon
so has part: feature:5764679-5764857:-1:exon
so has part: feature:5762977-5763123:-1:exon
so has part: feature:5761969-5762168:-1:exon
so has part: feature:5761382-5761602:-1:exon
so has part: feature:5760796-5761012:-1:exon
so has part: feature:5759703-5759925:-1:exon
so has part: feature:5758637-5758868:-1:exon
so has part: feature:5758179-5758275:-1:exon
so has part: feature:5755653-5755793:-1:exon
so has part: feature:5754376-5754561:-1:exon
so has part: feature:5753756-5754083:-1:exon
so has part: feature:5752786-5752919:-1:exon
so has part: feature:5752352-5752479:-1:exon
so has part: feature:5751963-5752123:-1:exon
so has part: feature:5749942-5750152:-1:exon
so has part: feature:5749136-5749237:-1:exon
so has part: feature:5745561-5745692:-1:exon
so has part: feature:5745038-5745429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5791088-5791657:-1:exon