Anolis carolinensis mitochondrion, complete genome.
type: Entry
definition: Anolis carolinensis mitochondrion, complete genome.
sequence version: NC_010972.2
sequence date: 2012-11-02
sequence: sequence
division: VRT
label: NC_010972.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA30199
keyword: RefSeq
source: mitochondrion Anolis carolinensis (green anole)
organism: Anolis carolinensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis.
reference: 1
references: 18493604
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from EU747728.\nOn Jan 18, 2011 this sequence version replaced gi:190349342.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 17223
topology: circular
so has quality: SO_0000988
location: 1..17223
location: region:1-17223:1
RO_0002162: 28377

NC_010972
type: RefSeq
SIO_000068: refseq

PRJNA30199
type: BioProject
SIO_000068: bioproject

1
title: Adaptive evolution and functional redesign of core metabolic proteins in snakes
author: Castoe, T.A.
author: Jiang, Z.J.
author: Gu, W.
author: Wang, Z.O.
author: Pollock, D.D.
journal: PLoS ONE 3 (5), E2201 (2008)
pubmed: 18493604
comments: Publication Status: Online-Only

18493604
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Castoe, T.A.
author: Jiang, Z.J.
author: Gu, W.
author: Wang, Z.O.
author: Pollock, D.D.
journal: Submitted (23-MAY-2008) Biochemistry and Molecular Genetics, University of Colorado School of Medicine, MS 8101, 12801 17th Ave. PO Box 6511, Aurora, CO 80045, USA

3
title: Direct Submission
journal: Submitted (01-AUG-2000) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17223:1
position: 17223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17223:1:source
so part of: sequence
organism: Anolis carolinensis
organelle: mitochondrion
mol type: genomic DNA

28377
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Phe
so part of: sequence
location: 1..72
location: region:1-72:1
so has part: feature:1-72:1:region

position:72:1
position: 72
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-72:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 28377
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: 73..1008
location: region:73-1008:1
so has part: feature:73-1008:1:region

position:73:1
position: 73
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008:1
position: 1008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73-1008:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Val
so part of: sequence
location: 1009..1076
location: region:1009-1076:1
so has part: feature:1009-1076:1:region

position:1009:1
position: 1009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076:1
position: 1076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009-1076:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 28377
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: 1077..2598
location: region:1077-2598:1
so has part: feature:1077-2598:1:region

position:1077:1
position: 1077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2598:1
position: 2598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077-2598:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2599..2672
location: region:2599-2672:1
so has part: feature:2599-2672:1:region

position:2599:1
position: 2599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2672:1
position: 2672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2599-2672:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: ND1
so part of: sequence
location: 2673..3633
location: region:2673-3633:1
so has part: feature:2673-3633:1:exon
subclass of: SO_0000010

6385981
type: Gene
SIO_000068: ncbigene

position:2673:1
position: 2673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3633:1
position: 3633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2673-3633:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: ND1
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3633,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MTHFLNNIINPLLYIIPILLAVAFLTLLERKILGYMQLRKGPNIVGPQGLLQPVADGVKLFIKEPVRPSTSSPTLFIFTPTLALFLALAIWTPIPMPLPLADLNLALLFILAMSSMAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGLILLAVVLMSGSFSLKSILLAQEYTPLLLSSWPLMMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNTLSCVLFLSLGQTNMQTFTPLLMTKVIVLTIGFLWVRASYPRFRYDQLMQLLWKQFLPLTLALCLWHTTILTSMFFIPPQ
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2673..3633
location: region:2673-3633:1
so has part: feature:2673-3633:1:exon

YP_001974670.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2673-3633:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Ile
so part of: sequence
location: 3634..3704
location: region:3634-3704:1
so has part: feature:3634-3704:1:region

position:3634:1
position: 3634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3704:1
position: 3704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3634-3704:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Gln
so part of: sequence
location: complement(3703..3772)
location: region:3703-3772:-1
so has part: feature:3703-3772:-1:region

position:3703:-1
position: 3703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772:-1
position: 3772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3703-3772:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Met
so part of: sequence
location: 3772..3840
location: region:3772-3840:1
so has part: feature:3772-3840:1:region

position:3772:1
position: 3772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3840:1
position: 3840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3772-3840:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: ND2
so part of: sequence
location: 3841..4876
location: region:3841-4876:1
so has part: feature:3841-4876:1:exon
subclass of: SO_0000010

6385980
type: Gene
SIO_000068: ncbigene

position:3841:1
position: 3841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4876:1
position: 4876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3841-4876:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:4876,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MSPTIYMIILSTLATGTIITMTSYHWLMAWVGLELNTLAIIPIISTMHHPRSTEAATKYFLTQAAASALILFSSMTNAWNTGSWDITQPLTSPSHILLTMALAMKLGLAPLHFWLPEVIQGSTMTTAFIITTWQKIAPMSLIFLTMNNLSTSVFLLMGLLSSLVGGWGGLNQTQTRKIMAYSSIAHLGWMATISSIMTNILIMNLLIYLIMTTSVFLSLIISKSKTIQDTTSTWTLSPTLTIIMLLSLLSLGGLPPLTGFIPKWLIMEELILQNFNLLISMMAMSSLLSLYFYLRLTYTTALTLSPNTTQTKFKWRFYPNTSTMFIITPATISIFLLPMTPLILL
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 3841..4876
location: region:3841-4876:1
so has part: feature:3841-4876:1:exon

YP_001974671.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3841-4876:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Trp
so part of: sequence
location: 4877..4946
location: region:4877-4946:1
so has part: feature:4877-4946:1:region

position:4877:1
position: 4877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4946:1
position: 4946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4877-4946:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Ala
so part of: sequence
location: complement(4947..5015)
location: region:4947-5015:-1
so has part: feature:4947-5015:-1:region

position:4947:-1
position: 4947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5015:-1
position: 5015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4947-5015:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Asn
so part of: sequence
location: complement(5017..5089)
location: region:5017-5089:-1
so has part: feature:5017-5089:-1:region

position:5017:-1
position: 5017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5089:-1
position: 5089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5017-5089:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Cys
so part of: sequence
location: complement(5123..5186)
location: region:5123-5186:-1
so has part: feature:5123-5186:-1:region

position:5123:-1
position: 5123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5186:-1
position: 5186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5123-5186:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Tyr
so part of: sequence
location: complement(5187..5256)
location: region:5187-5256:-1
so has part: feature:5187-5256:-1:region

position:5187:-1
position: 5187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5256:-1
position: 5256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5187-5256:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: COX1
so part of: sequence
location: 5258..6802
location: region:5258-6802:1
so has part: feature:5258-6802:1:exon
subclass of: SO_0000010

6385977
type: Gene
SIO_000068: ncbigene

position:5258:1
position: 5258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6802:1
position: 6802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5258-6802:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MFLNRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLASNLAHAGASVDLTIFSLHLAGVSSILGAINFITTCINMKPSTMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTSFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGMIKWDAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFSLHQAWTKAQFGVMFAGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNAISSIGSLISLVAVIMMMFIIWEAFASKREICSLELASTNLEWLHGCPPPYHTYEEPTFVQPS
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5258..6802
location: region:5258-6802:1
so has part: feature:5258-6802:1:exon

YP_001974672.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5258-6802:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(6798..6868)
location: region:6798-6868:-1
so has part: feature:6798-6868:-1:region

position:6798:-1
position: 6798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6868:-1
position: 6868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6798-6868:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Asp
so part of: sequence
location: 6871..6939
location: region:6871-6939:1
so has part: feature:6871-6939:1:region

position:6871:1
position: 6871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6939:1
position: 6939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6871-6939:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: COX2
so part of: sequence
location: 6940..7627
location: region:6940-7627:1
so has part: feature:6940-7627:1:exon
subclass of: SO_0000010

6385975
type: Gene
SIO_000068: ncbigene

position:6940:1
position: 6940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7627:1
position: 7627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6940-7627:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7627,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDAASPIMEELLHFHDHALMIVFLISALVLYTITIMMTTALTHTNTMDAQEVEMIWTILPAIILILIALPSLRILYLMDEINNPHLTIKTMGHQWYWSYEYTDYQDLEFDSYMLPTTDLDKGTTRLLEVDNRMVIPMESPIRMLISAQDVLHSWAVPALGIKTDAIPGRLNQTTFITSHPGMFYGQCSEICGSNHSFMPIVVESVPLNAFENWTTTLLTS
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 6940..7627
location: region:6940-7627:1
so has part: feature:6940-7627:1:exon

YP_001974673.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6940-7627:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Lys
so part of: sequence
location: 7628..7693
location: region:7628-7693:1
so has part: feature:7628-7693:1:region

position:7628:1
position: 7628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7693:1
position: 7693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7628-7693:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: ATP8
so part of: sequence
location: 7694..7861
location: region:7694-7861:1
so has part: feature:7694-7861:1:exon
subclass of: SO_0000010

6385972
type: Gene
SIO_000068: ncbigene

position:7694:1
position: 7694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7861:1
position: 7861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7694-7861:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPSPWLMIFFLIWLFLTLVLFNKALKPMFPNTTETKEMTKPAPQPWNWPWY
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7694..7861
location: region:7694-7861:1
so has part: feature:7694-7861:1:exon

YP_001974674.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7694-7861:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: ATP6
so part of: sequence
location: 7852..8535
location: region:7852-8535:1
so has part: feature:7852-8535:1:exon
subclass of: SO_0000010

6385984
type: Gene
SIO_000068: ncbigene

position:7852:1
position: 7852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8535:1
position: 8535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7852-8535:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MMLSFFDQFSIPTVLGIPLIFVATIFPALLIVMNNSRLVLNRLSTLLEWSMKLFSKQLMLPINLPGHKWTALLLTLMMTLSSLNMLGLLPYTFTPTTQLSFNMALAVPMWLATVMIGLRNQPTISLGHLLPEGTPLMLIPILIIIETISLFIRPLALGVRLTANITAGHLLIQLISTATFVLLPMMTMTATITFIVLLLLTGLEIAVALIQAYVFVLLLSLYLQENV
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 7852..8535
location: region:7852-8535:1
so has part: feature:7852-8535:1:exon

YP_001974675.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7852-8535:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: COX3
so part of: sequence
location: 8535..9318
location: region:8535-9318:1
so has part: feature:8535-9318:1:exon
subclass of: SO_0000010

6385983
type: Gene
SIO_000068: ncbigene

position:9318:1
position: 9318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8535-9318:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9318,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MTHQAHAYHMVDPSPWPVTGAIAALLMTSGLAVWFHFSNLILMNLGLIVLFLTMLQWWRDIIREGTFQGHHTTPVQKGLRYGMILFITSEVFFFIGFFWAFYHSSLAPTPELGGCWPPSGIDPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEKARKEASQALALTVLFGLYFTALQVMEYYEAPFAISDSVYGTTFFVATGFHGLHVIIGTLFLTVCFIRQTYFHFTAEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8535..9318
location: region:8535-9318:1
so has part: feature:8535-9318:1:exon

YP_001974676.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8535-9318:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Gly
so part of: sequence
location: 9319..9385
location: region:9319-9385:1
so has part: feature:9319-9385:1:region

position:9319:1
position: 9319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9385:1
position: 9385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9319-9385:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: ND3
so part of: sequence
location: 9386..9731
location: region:9386-9731:1
so has part: feature:9386-9731:1:exon
subclass of: SO_0000010

6385979
type: Gene
SIO_000068: ncbigene

position:9386:1
position: 9386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9731:1
position: 9731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9386-9731:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9731,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLSSMILITMTISIVLIIISFWLPQLNSDTEKLSPYECGFDPLGNARLPFSLRFFLVAILFLLFDLEIALLLPLPWAINLGSPLQTSTLTSAILVLLTLGLVYEWLQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9386..9731
location: region:9386-9731:1
so has part: feature:9386-9731:1:exon

YP_001974677.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9386-9731:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Arg
so part of: sequence
location: 9732..9799
location: region:9732-9799:1
so has part: feature:9732-9799:1:region

position:9732:1
position: 9732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9799:1
position: 9799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9732-9799:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: ND4L
so part of: sequence
location: 9800..10096
location: region:9800-10096:1
so has part: feature:9800-10096:1:exon
subclass of: SO_0000010

6385973
type: Gene
SIO_000068: ncbigene

position:9800:1
position: 9800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10096:1
position: 10096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9800-10096:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPTNLLMYSTFSLSIFGLSMHRSHLVSALLCIEGMMLALFITSATLLSTTQTTSLAATPIILLTFSACEAGTGLALLVATARTHGNDHLQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 9800..10096
location: region:9800-10096:1
so has part: feature:9800-10096:1:exon

YP_001974678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9800-10096:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: ND4
so part of: sequence
location: 10090..11454
location: region:10090-11454:1
so has part: feature:10090-11454:1:exon
subclass of: SO_0000010

6385974
type: Gene
SIO_000068: ncbigene

position:10090:1
position: 10090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11454:1
position: 11454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10090-11454:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: ND4
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKIILPTILLTPTAFIIKPSILFSSYLSFSLLIALTSLTWLNYPATTPQYFTDLMMVDRISAPLLTLTCWLLPLMVMASQNHLNQEPLHRKRTFLILISILQALLIFTFSTTNLILFYIMFEATLIPTLVVITRWGNQAERLTAGTYFLFYTLASSLPLLIAILFINFKNNLSSTMVLQMIQPQMMETASNSLLWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRMTTILHPQPLNLFYPFLILSLWGIVMTSSICMRQTDLKSLIAYSSVSHMGLVISACLIQTPWANTGAMLLMIAHGLTSSMLFCLANTSYERTHSRTMVLARGLQLVFPLMTTWWLLANLTNMALPPSINLMGELLIITSLFNWSMTTIILTGTGTLITAIYTLNMFLTTQRNKLPNHLMTNTPNHTREHLLMILHAAPLLLLILNPSLI
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10090..11454
location: region:10090-11454:1
so has part: feature:10090-11454:1:exon

YP_001974679.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10090-11454:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-His
so part of: sequence
location: 11463..11531
location: region:11463-11531:1
so has part: feature:11463-11531:1:region

position:11463:1
position: 11463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11531:1
position: 11531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11463-11531:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11532..11598
location: region:11532-11598:1
so has part: feature:11532-11598:1:region

position:11532:1
position: 11532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11598:1
position: 11598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11532-11598:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11598..11668
location: region:11598-11668:1
so has part: feature:11598-11668:1:region

position:11668:1
position: 11668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11598-11668:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: ND5
so part of: sequence
location: 11670..13475
location: region:11670-13475:1
so has part: feature:11670-13475:1:exon
subclass of: SO_0000010

6385976
type: Gene
SIO_000068: ncbigene

position:11670:1
position: 11670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13475:1
position: 13475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11670-13475:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MHNTIFFSSMLSTLFIIILPAMKSMLNKTPPTPNKMKQAVQLAFMISLIPLLLFINNGMEATLTNFSLLSINNFNIKLSFMLDSYSLMFMPIALFVTWSILEFSLWYMALDPHITRFFKYLLTFLLAMLTLVTANSLFQFFIGWEGVGIMSFLLIGWWFSRADANSSALQAIIYNRIGDIGLILMISWSAMNLSTWQINDLFSLDTSHMIPSIGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRLHPTLEKHQLLLTMCLCLGAITTVFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFFHISTHAFFKAMLFLCSGSIIHSLANEQDIRMMGGVKNYLPITSSCLTIGSLALMGTPFLSGFYSKDTIIETMNNSHLNAWALSMTILATMLTAAYSLRMVFYVQMNSPRHKALSPINENSKTLINPITRLALGSLVAGLLIMTATLPSKTLLMTMPTMMKLLALIITILGIIITMDTMNWTTTLPMKTPNFNFYLSNQLLFFNIFHRSLPMKALKFSQSMATMTNDLLWSEKAGPKGMTMMQLPMTNLASSQKSLMKNYLTTFIITTLLTMILLT
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11670..13475
location: region:11670-13475:1
so has part: feature:11670-13475:1:exon

YP_001974680.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11670-13475:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: ND6
so part of: sequence
location: complement(13471..13995)
location: region:13471-13995:-1
so has part: feature:13471-13995:-1:exon
subclass of: SO_0000010

6385982
type: Gene
SIO_000068: ncbigene

position:13471:-1
position: 13471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13995:-1
position: 13995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13471-13995:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MVYFIFITFFCLVGGLAVVACNPSPYFGAAGLVLSSVAACTVVVEFGGSFVSLILFLIYLGGMLVVFAYSVALASDPFPEGIWDMSVGAYFTGYLVFLVGFLAVFGGDSFFYNFGVIGSEASGFNVVRGDFEGVSLLYGLGGAGLVICGWGLLLTLFVVLELTRGMSRGGLRVI
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13471..13995)
location: region:13471-13995:-1
so has part: feature:13471-13995:-1:exon

YP_001974681.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13471-13995:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Glu
so part of: sequence
location: complement(13997..14066)
location: region:13997-14066:-1
so has part: feature:13997-14066:-1:region

position:13997:-1
position: 13997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14066:-1
position: 14066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13997-14066:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 28377
gene: CYTB
so part of: sequence
location: 14068..15207
location: region:14068-15207:1
so has part: feature:14068-15207:1:exon
subclass of: SO_0000010

6385978
type: Gene
SIO_000068: ncbigene

position:14068:1
position: 14068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15207:1
position: 15207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14068-15207:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28377
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MTIMRKTHPMFKIINGSFIDLPTPSNISAWWNFGSLLGVCLVIQILTGLFLAMHYTADILSAFSSVAHISRDVQYGWLIRNTHANGASMFFICIYLHIGRGLYYGSYMFKETWNLGVVLLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGTLMVEWIWGGFSVDNATLTRFFAFHFLLPFMVAGVSIIHLLFLHETGSNNPTGLQSNSDKIPFHPYFSYKDLLGIVLMLMLLLTLALFYPNLLGDPENFSPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVIALLMSILILIFIPMLHTSKQRSNTFRPMSQLMFWALIANIIILTWIGGQPVEHPFIIIGQVASITYFMIFIFILPTLAIMENKLLKW
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14068..15207
location: region:14068-15207:1
so has part: feature:14068-15207:1:exon

YP_001974682.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14068-15207:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Thr
so part of: sequence
location: 15208..15276
location: region:15208-15276:1
so has part: feature:15208-15276:1:region

position:15208:1
position: 15208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15276:1
position: 15276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15208-15276:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28377
product: tRNA-Pro
so part of: sequence
location: complement(15281..15347)
location: region:15281-15347:-1
so has part: feature:15281-15347:-1:region

position:15281:-1
position: 15281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15347:-1
position: 15347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15281-15347:-1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 28377
note: control region
so part of: sequence
location: 15348..17223
location: region:15348-17223:1
so has part: feature:15348-17223:1:region

position:15348:1
position: 15348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15348-17223:1:region