Allobaculum mucilyticum strain 128 chromosome, complete genome.
Bacteria; Bacillota; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Allobaculum.
Combinatorial reprogramming of mucosal immunity by human gut commensals
Submitted (30-JUN-2021) Immunobiology, Yale University, 300 Cedar St, New Haven, CT 06519, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP078089.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 20-JUN-2020\nAssembly Method :: Unicycler v. v0.4.9b\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/11/2023 03:28:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,604\nCDSs (total) :: 2,497\nGenes (coding) :: 2,464\nCDSs (with protein) :: 2,464\nGenes (RNA) :: 107\nrRNAs :: 15, 15, 15 (5S, 16S, 23S)\ncomplete rRNAs :: 15, 15, 15 (5S, 16S, 23S)\ntRNAs :: 59\nncRNAs :: 3\nPseudo Genes (total) :: 33\nCDSs (without protein) :: 33\nPseudo Genes (ambiguous residues) :: 0 of 33\nPseudo Genes (frameshifted) :: 8 of 33\nPseudo Genes (incomplete) :: 27 of 33\nPseudo Genes (internal stop) :: 3 of 33\nPseudo Genes (multiple problems) :: 5 of 33\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF014068.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF002794.0
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018579605.1
COORDINATES: protein motif:HMM:NF004325.0
GO:0016832 - aldehyde-lyase activity [Evidence IEA]; GO:0016830 - carbon-carbon lyase activity [Evidence IEA]; GO:0016833 - oxo-acid-lyase activity [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_006058697.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006058696.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016200.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018513.2
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016945.2
alpha-N-acetylglucosaminidase TIM-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893352.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012377.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00573.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003865155.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865154.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003865153.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892898.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014173.2
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF025826.2
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF012348.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892895.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892894.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004800583.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865117.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF022525.2
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892889.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008978344.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892886.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014300.2
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892883.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892882.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046167 - glycerol-3-phosphate biosynthetic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_015535231.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF019612.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006057707.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003532174.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012707.2
amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF014345.2
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892875.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_019891950.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF026954.2
phosphoribosyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000241500.1
COORDINATES: protein motif:HMM:NF016972.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF016983.2
COORDINATES: protein motif:HMM:NF024671.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892283.1
COORDINATES: protein motif:HMM:NF025063.2
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF025126.2
COORDINATES: similar to AA sequence:RefSeq:WP_006061067.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_008688796.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: protein motif:HMM:TIGR04350.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024601.2
COORDINATES: protein motif:HMM:NF019346.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012403.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008979490.1
GO:0047850 - diaminopimelate dehydrogenase activity [Evidence IEA]
GO:0009085 - lysine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019887.2
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033592.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024984.2
COORDINATES: similar to AA sequence:RefSeq:WP_009272827.1
ABC transporter ATP-binding protein/permease
helix-turn-helix domain containing protein
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:NF020450.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892860.1
COORDINATES: similar to AA sequence:RefSeq:WP_004799346.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892858.1
COORDINATES: protein motif:HMM:NF013862.2
COORDINATES: protein motif:HMM:NF019322.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014326.2
GO:0016740 - transferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
PTS lactose/cellobiose transporter subunit IIA
COORDINATES: protein motif:HMM:NF033550.5
COORDINATES: protein motif:HMM:NF040103.1
COORDINATES: protein motif:HMM:NF013068.2
COORDINATES: similar to AA sequence:RefSeq:WP_002606242.1
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025054.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019892846.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF025217.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892843.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014516.2
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892840.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892839.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012568.2
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892836.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_019892833.1
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:TIGR00083.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_003865028.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013348.2
tRNA 2-thiocytidine biosynthesis TtcA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892828.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019892139.1
COORDINATES: similar to AA sequence:RefSeq:WP_008979715.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF014899.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892826.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892825.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892824.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_019892823.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535889.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016005.2
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: protein motif:HMM:NF013670.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892814.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892812.1
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892805.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: similar to AA sequence:RefSeq:WP_008819290.1
acyl CoA:acetate/3-ketoacid CoA transferase
COORDINATES: similar to AA sequence:RefSeq:WP_009272747.1
COORDINATES: similar to AA sequence:RefSeq:WP_008819292.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008688789.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009272750.1
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009272751.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892793.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF040132.1
COORDINATES: protein motif:HMM:NF012863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF024863.2
COORDINATES: similar to AA sequence:RefSeq:WP_008688305.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892790.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892788.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864995.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF014617.2
GO:0000028 - ribosomal small subunit assembly [Evidence IEA]; GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017143714.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892781.1
NFACT RNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF013827.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF037272.2
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892777.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015535970.1
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892774.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892768.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019892765.1
COORDINATES: protein motif:HMM:NF025946.2
COORDINATES: similar to AA sequence:RefSeq:WP_006060259.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_019892759.1
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892758.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003528899.1
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006060236.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892753.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892752.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF013530.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003773073.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892748.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892747.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003538104.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864004.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024991.2
COORDINATES: similar to AA sequence:RefSeq:WP_015536105.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025120.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:NF014641.2
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF013219.2
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013648.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013259.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0050311 - sulfite reductase (ferredoxin) activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF024230.2
COORDINATES: similar to AA sequence:RefSeq:WP_002605766.1
COORDINATES: protein motif:HMM:NF016309.2
COORDINATES: similar to AA sequence:RefSeq:WP_008787692.1
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009273124.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892719.1
GO:0051060 - pullulanase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892716.1
GO:0004333 - fumarate hydratase activity [Evidence IEA]
GO:0006106 - fumarate metabolic process [Evidence IEA]; GO:0006108 - malate metabolic process [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892715.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03705.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025562.2
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF015325.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002164075.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892710.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020049.2
COORDINATES: similar to AA sequence:RefSeq:WP_006504770.1
COORDINATES: protein motif:HMM:TIGR01641.1
GO:0044423 - virion component [Evidence IEA]
GO:0016032 - viral process [Evidence IEA]; GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01538.1
GO:0046798 - viral portal complex [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0051027 - DNA transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015038.2
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_004057096.1
COORDINATES: protein motif:HMM:TIGR00704.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016180804.1
COORDINATES: similar to AA sequence:RefSeq:WP_004608834.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892615.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_019892614.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892613.1
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_009271935.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_019892586.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892585.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892584.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892583.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892581.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008689934.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013853418.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892573.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019371.2
COORDINATES: protein motif:HMM:TIGR01909.1
COORDINATES: protein motif:HMM:NF022641.2
COORDINATES: protein motif:HMM:NF014164.2
COORDINATES: similar to AA sequence:RefSeq:WP_009271269.1
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008816303.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015535130.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002606747.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_019892554.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019892553.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_006060425.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_019892550.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_015535942.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_019892548.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001808.0
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002610165.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012095718.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892533.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892527.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292941.1
GO:0003872 - 6-phosphofructokinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012413.2
GO:0004146 - dihydrofolate reductase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892523.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892522.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892514.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003863882.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892509.1
COORDINATES: similar to AA sequence:RefSeq:WP_000426359.1
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008978782.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892503.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_003863877.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_008978785.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_008978786.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: protein motif:HMM:NF012382.2
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892497.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892496.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024785.2
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012956.2
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_019892490.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892488.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538789.1
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: similar to AA sequence:RefSeq:WP_006060438.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005930182.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0006102 - isocitrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003863864.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892478.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892476.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003863860.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892473.1
COORDINATES: similar to AA sequence:RefSeq:WP_009272495.1
Spx/MgsR family RNA polymerase-binding regulatory protein
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: similar to AA sequence:RefSeq:WP_009010029.1
COORDINATES: similar to AA sequence:RefSeq:WP_002610500.1
COORDINATES: similar to AA sequence:RefSeq:WP_009272856.1
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892469.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892468.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:NF016119.2
COORDINATES: similar to AA sequence:RefSeq:WP_009587898.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892444.1
GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
PTS system mannose/fructose/sorbose family transporter subunit IID
COORDINATES: similar to AA sequence:RefSeq:WP_006626643.1
GO:0034219 - carbohydrate transmembrane transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892442.1
PTS galactosamine transporter subunit IIB
COORDINATES: similar to AA sequence:RefSeq:WP_019892440.1
COORDINATES: protein motif:HMM:TIGR01760.1
GO:0016032 - viral process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017343.2
COORDINATES: protein motif:HMM:TIGR01560.2
COORDINATES: protein motif:HMM:NF016923.2
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01554.2
COORDINATES: similar to AA sequence:RefSeq:WP_009052888.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008978742.1
COORDINATES: protein motif:HMM:NF020498.2
COORDINATES: similar to AA sequence:RefSeq:WP_004798168.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_019892437.1
PTS galactosamine/N-acetylgalactosamine transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_002605999.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892432.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004798117.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892430.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002608222.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017416.2
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF024932.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892428.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
putative manganese-dependent inorganic diphosphatase
COORDINATES: protein motif:HMM:NF014591.2
COORDINATES: protein motif:HMM:NF018964.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892424.1
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892421.1
GO:0004795 - threonine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004976.0
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003863829.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008690779.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002606775.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892412.1
GO:0033958 - DNA-deoxyinosine glycosylase activity [Evidence IEA]
GO:0006285 - base-excision repair, AP site formation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893383.1
COORDINATES: protein motif:HMM:NF025833.2
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:NF006396.0
bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase
COORDINATES: protein motif:HMM:NF024183.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892411.1
COORDINATES: similar to AA sequence:RefSeq:WP_008687192.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892404.1
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006784334.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015535832.1
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892398.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892394.1
COORDINATES: protein motif:HMM:NF012846.2
COORDINATES: protein motif:HMM:NF025153.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893379.1
BspA family leucine-rich repeat surface protein
COORDINATES: protein motif:HMM:NF019836.2
COORDINATES: protein motif:HMM:NF013661.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008789679.1
COORDINATES: protein motif:HMM:NF018329.2
COORDINATES: similar to AA sequence:RefSeq:WP_006504615.1
COORDINATES: similar to AA sequence:RefSeq:WP_008978744.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102985.1
COORDINATES: similar to AA sequence:RefSeq:WP_009269259.1
COORDINATES: similar to AA sequence:RefSeq:WP_015926202.1
COORDINATES: similar to AA sequence:RefSeq:WP_009270323.1
COORDINATES: similar to AA sequence:RefSeq:WP_009270322.1
gamma-glutamylcyclotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014387052.1
COORDINATES: similar to AA sequence:RefSeq:WP_009587729.1
COORDINATES: protein motif:HMM:NF016975.2
P27 family phage terminase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002349533.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF023181.2
COORDINATES: protein motif:HMM:NF019021.2
COORDINATES: protein motif:HMM:NF015259.2
primase-like DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF020289.2
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: protein motif:HMM:NF012464.2
GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002378843.1
COORDINATES: protein motif:HMM:NF025713.2
COORDINATES: protein motif:HMM:NF021648.2
COORDINATES: similar to AA sequence:RefSeq:WP_002563688.1
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: protein motif:HMM:NF013964.2
COORDINATES: similar to AA sequence:RefSeq:WP_003508841.1
COORDINATES: similar to AA sequence:RefSeq:WP_019155135.1
GO:0004519 - endonuclease activity [Evidence IEA]
HNH endonuclease signature motif containing protein
COORDINATES: protein motif:HMM:NF016432.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009270314.1
COORDINATES: similar to AA sequence:RefSeq:WP_009242856.1
COORDINATES: protein motif:HMM:TIGR01613.1
GO:0003896 - DNA primase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF019886.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_002362744.1
COORDINATES: similar to AA sequence:RefSeq:WP_009270308.1
COORDINATES: similar to AA sequence:RefSeq:WP_008817754.1
COORDINATES: similar to AA sequence:RefSeq:WP_006504883.1
COORDINATES: similar to AA sequence:RefSeq:WP_017464805.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023583.2
type I restriction-modification system subunit M N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009269238.1
COORDINATES: protein motif:HMM:NF017793.2
COORDINATES: protein motif:HMM:TIGR03930.1
COORDINATES: protein motif:HMM:NF013727.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012298.2
lipopolysaccharide kinase InaA family protein
COORDINATES: protein motif:HMM:NF028007.2
GO:0051219 - phosphoprotein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892364.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]; GO:0034979 - NAD-dependent protein deacetylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008817568.1
COORDINATES: similar to AA sequence:RefSeq:WP_009607059.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF024209.2
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004797765.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_019892360.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892358.1
RsmF rRNA methyltransferase first C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013700.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009272883.1
COORDINATES: protein motif:HMM:NF024304.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000377063.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000504752.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_006504746.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893305.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: protein motif:HMM:TIGR03057.1
COORDINATES: similar to AA sequence:RefSeq:WP_009271444.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865541.1
COORDINATES: protein motif:HMM:TIGR01178.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893308.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003865820.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0051775 - response to redox state [Evidence IEA]
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_019893318.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893320.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865826.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893323.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893324.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893325.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893327.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014759.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
5'-3' exonuclease H3TH domain-containing protein
COORDINATES: protein motif:HMM:NF024598.2
COORDINATES: similar to AA sequence:RefSeq:WP_003865831.1
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: similar to AA sequence:RefSeq:WP_006057848.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_008687616.1
COORDINATES: similar to AA sequence:RefSeq:WP_006504793.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893343.1
transporter substrate-binding domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013357.2
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025384.2
protein phosphatase 2C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006626357.1
UDP-N-acetylglucosamine pyrophosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_019893390.1
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_004610811.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893416.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004798664.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003535399.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: similar to AA sequence:RefSeq:WP_003863976.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893432.1
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: protein motif:HMM:NF014471.2
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008688319.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893444.1
COORDINATES: protein motif:HMM:NF019500.2
GO:0005267 - potassium channel activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF013798.2
COORDINATES: protein motif:HMM:NF014445.2
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: protein motif:HMM:NF024748.2
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290330.1
COORDINATES: similar to AA sequence:RefSeq:WP_004610916.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015536231.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009270135.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: protein motif:HMM:NF019401.2
COORDINATES: protein motif:HMM:NF025628.2
COORDINATES: protein motif:HMM:NF015049.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025644.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_015536373.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]; GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023955.2
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893456.1
COORDINATES: protein motif:HMM:NF024744.2
GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024587.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893460.1
class II D-tagatose-bisphosphate aldolase, non-catalytic subunit
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: protein motif:HMM:NF014690.2
GO:0043772 - acyl-phosphate glycerol-3-phosphate acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]; GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893463.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893473.1
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019893474.1
COORDINATES: similar to AA sequence:RefSeq:WP_006058602.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_019893965.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893966.1
COORDINATES: protein motif:HMM:TIGR01322.1
COORDINATES: similar to AA sequence:RefSeq:WP_009300003.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
sucrose-specific PTS transporter subunit IIBC
COORDINATES: similar to AA sequence:RefSeq:WP_019892343.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893499.1
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF021028.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893477.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893478.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893479.1
galactose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893482.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_009589072.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_019893486.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:NF016839.2
GO:0051301 - cell division [Evidence IEA]
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009271819.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_015536425.1
polysaccharide biosynthesis C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893493.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893494.1
COORDINATES: protein motif:HMM:TIGR01389.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008818300.1
GO:0047200 - tetrahydrodipicolinate N-acetyltransferase activity [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR00036.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_019892943.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: similar to AA sequence:RefSeq:WP_004798149.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:NF025851.2
glycoside hydrolase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019193.2
beta-N-acetylglucosaminidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893384.1
COORDINATES: protein motif:HMM:NF015347.2
COORDINATES: similar to AA sequence:RefSeq:WP_006785505.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: protein motif:HMM:TIGR03828.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019893513.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009273281.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00589.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006059850.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893514.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865177.1
COORDINATES: protein motif:HMM:NF021127.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO:0045227 - capsule polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: similar to AA sequence:RefSeq:WP_003864339.1
autorepressor SdpR family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_006505228.1
GO:0005507 - copper ion binding [Evidence IEA]
GO:0055070 - copper ion homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:NF021178.2
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: similar to AA sequence:RefSeq:WP_003537889.1
COORDINATES: similar to AA sequence:RefSeq:WP_009607202.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892034.1
COORDINATES: protein motif:HMM:NF015683.2
glutathionylspermidine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003864697.1
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: protein motif:HMM:NF024527.2
COORDINATES: similar to AA sequence:RefSeq:WP_156816539.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019892026.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013410305.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF002543.0
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: protein motif:HMM:TIGR00730.1
COORDINATES: protein motif:HMM:NF013488.2
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003539599.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002610412.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009300322.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019892012.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013378.2
COORDINATES: protein motif:HMM:NF012308.2
COORDINATES: protein motif:HMM:NF022281.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892007.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892005.1
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_019892004.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024702.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893386.1
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF024884.2
COORDINATES: similar to AA sequence:RefSeq:WP_003536534.1
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019891989.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF014926.2
COORDINATES: protein motif:HMM:NF014850.2
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002608001.1
COORDINATES: protein motif:HMM:NF015549.2
COORDINATES: similar to AA sequence:RefSeq:WP_004801155.1
COORDINATES: similar to AA sequence:RefSeq:WP_015530644.1
COORDINATES: similar to AA sequence:RefSeq:WP_004801153.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891983.1
iron-sulfur cluster biosynthesis family protein
COORDINATES: protein motif:HMM:NF015629.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003864807.1
COORDINATES: similar to AA sequence:RefSeq:WP_006525487.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891973.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891971.1
COORDINATES: similar to AA sequence:RefSeq:WP_006784080.1
COORDINATES: similar to AA sequence:RefSeq:WP_002584327.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891957.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019891956.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019891955.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019891954.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_016291655.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_019891952.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002611420.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025056.2
GO:0003953 - NAD+ nucleosidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
toll/interleukin-1 receptor domain-containing protein
COORDINATES: protein motif:HMM:NF018604.2
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF020496.2
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF025751.2
COORDINATES: similar to AA sequence:RefSeq:WP_009274251.1
COORDINATES: similar to AA sequence:RefSeq:WP_008691072.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020904.2
GO:0042546 - cell wall biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02404.1
COORDINATES: protein motif:HMM:TIGR00826.1
COORDINATES: protein motif:HMM:NF008236.0
COORDINATES: similar to AA sequence:RefSeq:WP_003773313.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025053.2
COORDINATES: protein motif:HMM:NF012708.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0051219 - phosphoprotein binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
FHA domain-containing serine/threonine-protein kinase
zinc finger Ran-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006627339.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
type I restriction endonuclease subunit R
COORDINATES: similar to AA sequence:RefSeq:WP_009662530.1
COORDINATES: similar to AA sequence:RefSeq:WP_008751000.1
COORDINATES: protein motif:HMM:NF039975.1
COORDINATES: protein motif:HMM:NF021498.2
COORDINATES: protein motif:HMM:NF026880.2
polymorphic toxin type 50 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006526087.1
COORDINATES: similar to AA sequence:RefSeq:WP_006526088.1
COORDINATES: protein motif:HMM:NF019908.2
COORDINATES: protein motif:HMM:NF039835.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535095.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR00974.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003049977.1
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:NF024257.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF037639.2
SpaA isopeptide-forming pilin-related protein
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: protein motif:HMM:NF033745.1
COORDINATES: protein motif:HMM:TIGR04226.1
prealbumin-like fold domain-containing protein
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: protein motif:HMM:NF017347.2
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid transport system II carrier protein
COORDINATES: protein motif:HMM:NF024743.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004799800.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF012931.2
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: protein motif:HMM:NF024741.2
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_008792203.1
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892640.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014600.2
GO:0008233 - peptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008819640.1
COORDINATES: protein motif:HMM:NF014019.2
heavy metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893369.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891949.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019891948.1
GO:0017103 - UTP:galactose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0019388 - galactose catabolic process [Evidence IEA]
UDP-glucose--hexose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019891946.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_019891944.1
COORDINATES: protein motif:HMM:NF037997.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891941.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: similar to AA sequence:RefSeq:WP_019891939.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019891938.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891937.1
COORDINATES: protein motif:HMM:NF018190.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0016052 - carbohydrate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015995.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
glycine betaine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013088.2
GO:0005215 - transporter activity [Evidence IEA]
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
nuclease-related domain-containing protein
COORDINATES: protein motif:HMM:NF024637.2
GO:0004672 - protein kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_015535681.1
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008978936.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009273985.1
COORDINATES: similar to AA sequence:RefSeq:WP_003866148.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003866149.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF025636.2
COORDINATES: protein motif:HMM:NF016136.2
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: similar to AA sequence:RefSeq:WP_019891916.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008818835.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891910.1
COORDINATES: similar to AA sequence:RefSeq:WP_006526252.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891908.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891907.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
3-dehydroquinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019891906.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015535438.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019891904.1
COORDINATES: similar to AA sequence:RefSeq:WP_006785494.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891903.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:TIGR00426.1
COORDINATES: protein motif:HMM:NF011663.0
PTS mannitol-specific transporter subunit IIBC
COORDINATES: protein motif:HMM:NF012579.2
BglG family transcription antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_008818858.1
COORDINATES: similar to AA sequence:RefSeq:WP_003866276.1
LPXTG cell wall anchor domain-containing protein
GO:0018262 - isopeptide cross-linking [Evidence IEA]
isopeptide-forming domain-containing fimbrial protein
COORDINATES: protein motif:HMM:NF021981.2
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893978.1
COORDINATES: protein motif:HMM:TIGR01068.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF025081.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893977.1
GO:0070726 - cell wall assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893127.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04076.1
COORDINATES: protein motif:HMM:NF020893.2
Sir2 silent information regulator family NAD-dependent deacetylase
COORDINATES: protein motif:HMM:NF003163.0
COORDINATES: similar to AA sequence:RefSeq:WP_004802054.1
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003533802.1
COORDINATES: similar to AA sequence:RefSeq:WP_006785747.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018446.2
COORDINATES: protein motif:HMM:NF013254.2
GO:0009113 - purine nucleobase biosynthetic process [Evidence IEA]
phosphoribosylglycinamide synthetase C domain-containing protein
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008816573.1
COORDINATES: protein motif:HMM:TIGR01509.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535679.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893943.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893940.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019893939.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893935.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014626.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893933.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_003865670.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893927.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_019893926.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893924.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013279.2
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893920.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893919.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893918.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893916.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_008690228.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: similar to AA sequence:RefSeq:WP_003774154.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003865686.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_019893908.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893907.1
COORDINATES: protein motif:HMM:TIGR00663.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893905.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_003397591.1
COORDINATES: protein motif:HMM:TIGR00188.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893902.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003865698.1
GO:0003676 - nucleic acid binding [Evidence IEA]
R3H domain-containing nucleic acid-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009274329.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893898.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893897.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003865703.1
COORDINATES: similar to AA sequence:RefSeq:WP_002606966.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003865706.1
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit delta
COORDINATES: protein motif:HMM:NF015678.2
COORDINATES: protein motif:HMM:NF008740.0
COORDINATES: protein motif:HMM:NF025380.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893891.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_019893890.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893889.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893888.1
COORDINATES: similar to AA sequence:RefSeq:WP_004801461.1
GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893887.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893885.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865742.1
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893881.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IEA]; GO:0009165 - nucleotide biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893880.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893879.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: similar to AA sequence:RefSeq:WP_019893878.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893877.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003866201.1
COORDINATES: similar to AA sequence:RefSeq:WP_002312259.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003532660.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_002335967.1
glycoside hydrolase family 99-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004610311.1
COORDINATES: similar to AA sequence:RefSeq:WP_004801484.1
FdtA/QdtA family cupin domain-containing protein
COORDINATES: protein motif:HMM:NF016357.2
GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_006627150.1
COORDINATES: similar to AA sequence:RefSeq:WP_004801467.1
adenylyltransferase/cytidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004801486.1
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019893843.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893842.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893841.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893840.1
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003866173.1
COORDINATES: similar to AA sequence:RefSeq:WP_002606333.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006506971.1
COORDINATES: protein motif:HMM:NF018335.2
COORDINATES: similar to AA sequence:RefSeq:WP_015535651.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009270127.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_019893831.1
GO:0043822 - ribonuclease M5 activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893830.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: similar to AA sequence:RefSeq:WP_003866187.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF025620.2
carbohydrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF027640.2
COORDINATES: protein motif:HMM:NF020916.2
polyphosphate polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002606459.1
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_019893814.1
COORDINATES: similar to AA sequence:RefSeq:WP_002610059.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893812.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893811.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893810.1
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893809.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893805.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: protein motif:HMM:NF014089.2
COORDINATES: protein motif:HMM:NF015898.2
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: protein motif:HMM:NF012678.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006506702.1
COORDINATES: protein motif:HMM:TIGR03025.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
COORDINATES: protein motif:HMM:NF025892.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893797.1
COORDINATES: protein motif:HMM:TIGR00374.1
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
GO:0006282 - regulation of DNA repair [Evidence IEA]
catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_019893792.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:TIGR04274.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893791.1
COORDINATES: similar to AA sequence:RefSeq:WP_008791533.1
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF024094.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_018578788.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_004802124.1
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_019893780.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893779.1
COORDINATES: protein motif:HMM:NF018837.2
enhanced serine sensitivity protein SseB C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: protein motif:HMM:NF018645.2
COORDINATES: protein motif:HMM:NF018288.2
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
glucose-6-phosphate isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893771.1
COORDINATES: protein motif:HMM:NF015436.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893768.1
COORDINATES: protein motif:HMM:NF012340.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893766.1
COORDINATES: similar to AA sequence:RefSeq:WP_008978602.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015535172.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893763.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019893762.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019893761.1
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019893760.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008687803.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013397.2
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893749.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893748.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893747.1
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012706.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009271355.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865732.1
COORDINATES: similar to AA sequence:RefSeq:WP_004610643.1
COORDINATES: similar to AA sequence:RefSeq:WP_002608081.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893746.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
TFIIB-type zinc ribbon-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003865454.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_015535140.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_015535141.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_019893733.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008818771.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_002608185.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012698.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_008787365.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893520.1
COORDINATES: protein motif:HMM:NF014026.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008689429.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893690.1
COORDINATES: protein motif:HMM:NF026165.2
(deoxy)nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF028039.2
COORDINATES: protein motif:HMM:NF023043.2
COORDINATES: protein motif:HMM:TIGR03928.1
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: protein motif:HMM:NF023335.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004630 - phospholipase D activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006505591.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893678.1
COORDINATES: protein motif:HMM:NF010151.0
GO:0015293 - symporter activity [Evidence IEA]
GO:0032329 - serine transport [Evidence IEA]; GO:0015826 - threonine transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF039825.1
COORDINATES: similar to AA sequence:RefSeq:WP_006057299.1
COORDINATES: similar to AA sequence:RefSeq:WP_005342311.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019192.2
COORDINATES: similar to AA sequence:RefSeq:WP_008978155.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_002605765.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893672.1
COORDINATES: similar to AA sequence:RefSeq:WP_003539400.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893662.1
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: protein motif:HMM:TIGR01494.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003773011.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF036772.2
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893653.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_009274128.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893647.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893646.1
COORDINATES: protein motif:HMM:NF024639.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893644.1
COORDINATES: similar to AA sequence:RefSeq:WP_008688221.1
COORDINATES: protein motif:HMM:TIGR00482.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003864422.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003864421.1
COORDINATES: protein motif:HMM:NF004079.0
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: protein motif:HMM:NF012861.2
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF023096.2
COORDINATES: similar to AA sequence:RefSeq:WP_003775280.1
COORDINATES: protein motif:HMM:TIGR01446.1
COORDINATES: similar to AA sequence:RefSeq:WP_008978466.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025496.2
COORDINATES: similar to AA sequence:RefSeq:WP_003831982.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535641.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:TIGR00045.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008887 - glycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893626.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865606.1
COORDINATES: protein motif:HMM:TIGR00619.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586619.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024590.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892137.1
COORDINATES: protein motif:HMM:NF013694.2
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR04518.1
folate family ECF transporter S component
COORDINATES: protein motif:HMM:TIGR01499.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893612.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893609.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008787837.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_003864854.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893605.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893604.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893602.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893600.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538175.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893596.1
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:NF021030.2
type I-E CRISPR-associated protein Cse1/CasA
COORDINATES: protein motif:HMM:NF021034.2
type I-E CRISPR-associated protein Cse2/CasB
COORDINATES: protein motif:HMM:NF020902.2
type I-E CRISPR-associated protein Cas7/Cse4/CasC
COORDINATES: protein motif:HMM:TIGR01868.1
type I-E CRISPR-associated protein Cas5/CasD
COORDINATES: protein motif:HMM:NF020377.2
type I-E CRISPR-associated protein Cas6/Cse3/CasE
COORDINATES: protein motif:HMM:TIGR03638.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-E CRISPR-associated endonuclease Cas1e
GO:0004521 - endoribonuclease activity [Evidence IEA]
type I-E CRISPR-associated endoribonuclease Cas2e
COORDINATES: similar to AA sequence:RefSeq:WP_019893595.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893594.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003866294.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004798311.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893588.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893586.1
COORDINATES: similar to AA sequence:RefSeq:WP_002607408.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893584.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893583.1
COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893580.1
COORDINATES: similar to AA sequence:RefSeq:WP_008979806.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893578.1
COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1
COORDINATES: similar to AA sequence:RefSeq:WP_001829710.1
COORDINATES: similar to AA sequence:RefSeq:WP_002607421.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893573.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690101.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864836.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893570.1
COORDINATES: similar to AA sequence:RefSeq:WP_002878195.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893568.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893567.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690084.1
COORDINATES: similar to AA sequence:RefSeq:WP_004798242.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535552.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893555.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893553.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002607436.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004610095.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893545.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_008690068.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015535547.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893540.1
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_002607460.1
COORDINATES: similar to AA sequence:RefSeq:WP_004798212.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_008690051.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535540.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690048.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892239.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892240.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892241.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892242.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892243.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892048.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF013756.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF018613.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015536319.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892057.1
transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008978464.1
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016959.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00011
COORDINATES: similar to AA sequence:RefSeq:WP_015536240.1
GO:0015234 - thiamine transmembrane transporter activity [Evidence IEA]
GO:0015888 - thiamine transport [Evidence IEA]
energy-coupled thiamine transporter ThiT
COORDINATES: similar to AA sequence:RefSeq:WP_006059037.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002608817.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01510.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019892069.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892070.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892073.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892074.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:NF021436.2
COORDINATES: similar to AA sequence:RefSeq:WP_009588173.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009269802.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893669.1
COORDINATES: protein motif:HMM:NF039324.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892080.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_008691193.1
COORDINATES: similar to AA sequence:RefSeq:WP_009271774.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_019892083.1
COORDINATES: similar to AA sequence:RefSeq:WP_009271778.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892086.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535602.1
COORDINATES: similar to AA sequence:RefSeq:WP_009273101.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_019892089.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892090.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892091.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892092.1
COORDINATES: protein motif:HMM:NF025919.2
COORDINATES: protein motif:HMM:NF024060.2
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:NF014443.2
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892101.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_015536155.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: protein motif:HMM:NF014877.2
LamG-like jellyroll fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006058869.1
COORDINATES: similar to AA sequence:RefSeq:WP_003537610.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015515748.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892106.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: protein motif:HMM:NF025953.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892107.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892110.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019892111.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892112.1
COORDINATES: similar to AA sequence:RefSeq:WP_015536078.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017485.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892115.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015536075.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF018435.2
COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1
COORDINATES: protein motif:HMM:NF003519.0
COORDINATES: protein motif:HMM:NF015380.2
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: similar to AA sequence:RefSeq:WP_002606881.1
nitrous oxide-stimulated promoter family protein
COORDINATES: protein motif:HMM:TIGR02868.1
GO:0055051 - ATP-binding cassette (ABC) transporter complex, integrated substrate binding [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0033230 - ABC-type cysteine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0033228 - cysteine export across plasma membrane [Evidence IEA]
thiol reductant ABC exporter subunit CydC
COORDINATES: similar to AA sequence:RefSeq:WP_003865310.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892136.1
COORDINATES: protein motif:HMM:NF012578.2
COORDINATES: similar to AA sequence:RefSeq:WP_003051028.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690629.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF015534.2
Type 1 glutamine amidotransferase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003535961.1
GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892145.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892146.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025124.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893016.1
COORDINATES: protein motif:HMM:NF011080.0
COORDINATES: similar to AA sequence:RefSeq:WP_008680044.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892151.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892152.1
GO:0005504 - fatty acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002607226.1
COORDINATES: protein motif:HMM:TIGR00621.2
COORDINATES: similar to AA sequence:RefSeq:WP_012096455.1
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF025624.2
COORDINATES: protein motif:HMM:NF017617.2
COORDINATES: protein motif:HMM:NF014404.2
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01517.1
GO:0005388 - P-type calcium transporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
calcium-translocating P-type ATPase, PMCA-type
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892158.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690414.1
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_008818213.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892164.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892166.1
COORDINATES: similar to AA sequence:RefSeq:WP_002606928.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892168.1
COORDINATES: protein motif:HMM:TIGR01145.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892170.1
COORDINATES: similar to AA sequence:RefSeq:WP_009588183.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892173.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892174.1
COORDINATES: protein motif:HMM:NF010480.0
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: similar to AA sequence:RefSeq:WP_002606309.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864804.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008819410.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00577.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: protein motif:HMM:NF012529.2
COORDINATES: similar to AA sequence:RefSeq:WP_006058291.1
class II fructose-1,6-bisphosphate aldolase
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: similar to AA sequence:RefSeq:WP_002606828.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0019277 - UDP-N-acetylgalactosamine biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019892215.1
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR01856.1
COORDINATES: protein motif:HMM:NF013607.2
GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]
low molecular weight protein-tyrosine-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_003865582.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865581.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_006506084.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004797400.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013567.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008688180.1
COORDINATES: similar to AA sequence:RefSeq:WP_006061115.1
COORDINATES: protein motif:HMM:NF022521.2
COORDINATES: similar to AA sequence:RefSeq:WP_003538981.1
COORDINATES: protein motif:HMM:NF033543.1
COORDINATES: protein motif:HMM:NF025854.2
COORDINATES: protein motif:HMM:NF016296.2
LytTR family transcriptional regulator DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006505402.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_000656093.1
COORDINATES: protein motif:HMM:NF015567.2
COORDINATES: similar to AA sequence:RefSeq:WP_006505399.1
COORDINATES: protein motif:HMM:NF015566.2
COORDINATES: protein motif:HMM:NF015769.2
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF016800.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF013126.2
COORDINATES: similar to AA sequence:RefSeq:WP_001933545.1
COORDINATES: similar to AA sequence:RefSeq:WP_009270310.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: similar to AA sequence:RefSeq:WP_006504772.1
COORDINATES: protein motif:HMM:NF019291.2
Eco57I restriction-modification methylase domain-containing protein
COORDINATES: protein motif:HMM:NF037660.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF037085.2
COORDINATES: similar to AA sequence:RefSeq:WP_006526136.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:NF024716.2
COORDINATES: protein motif:HMM:NF013300.2
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006505496.1
COORDINATES: similar to AA sequence:RefSeq:WP_008789884.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF012621.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892246.1
COORDINATES: protein motif:HMM:NF013413.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024966.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892247.1
GO:0003729 - mRNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892248.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003864360.1
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_015536048.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019892254.1
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF012651.2
COORDINATES: similar to AA sequence:RefSeq:WP_004608817.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892270.1
GO:0016020 - membrane [Evidence IEA]; GO:0005940 - septin ring [Evidence IEA]
GO:0000921 - septin ring assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892271.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892273.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:TIGR00479.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893387.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892282.1
GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009057.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_003538675.1
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892286.1
COORDINATES: similar to AA sequence:RefSeq:WP_003539418.1
COORDINATES: protein motif:HMM:NF024805.2
COORDINATES: similar to AA sequence:RefSeq:WP_008817357.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF014517.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892293.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF013053.2
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_019892294.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015146.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892298.1
COORDINATES: similar to AA sequence:RefSeq:WP_006505543.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0048473 - D-methionine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892301.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019892305.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864219.1
COORDINATES: protein motif:HMM:NF002805.0
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_006506607.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892317.1
COORDINATES: similar to AA sequence:RefSeq:WP_009273494.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_015535310.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892321.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_019892322.1
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003865978.1
COORDINATES: similar to AA sequence:RefSeq:WP_004610324.1
COORDINATES: protein motif:HMM:NF019997.2
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893297.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893290.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025711.2
COORDINATES: similar to AA sequence:RefSeq:WP_006507128.1
large-conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_019893277.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893519.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893268.1
COORDINATES: protein motif:HMM:NF021126.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_002609042.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893261.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019893260.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_015535349.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893242.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF037419.2
COORDINATES: similar to AA sequence:RefSeq:WP_008688673.1
COORDINATES: similar to AA sequence:RefSeq:WP_002608914.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893238.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019893237.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: protein motif:HMM:NF024929.2
COORDINATES: similar to AA sequence:RefSeq:WP_008790622.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535344.1
COORDINATES: similar to AA sequence:RefSeq:WP_009589066.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893232.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893231.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893230.1
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: similar to AA sequence:RefSeq:WP_019893228.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893227.1
COORDINATES: similar to AA sequence:RefSeq:WP_009008876.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF012257.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: similar to AA sequence:RefSeq:WP_008791138.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_019892148.1
COORDINATES: protein motif:HMM:NF024488.2
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: similar to AA sequence:RefSeq:WP_006504273.1
GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017539.2
COORDINATES: protein motif:HMM:NF012783.2
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:NF014581.2
type IV secretory system conjugative DNA transfer family protein
COORDINATES: protein motif:HMM:NF014124.2
COORDINATES: protein motif:HMM:NF037025.2
COORDINATES: similar to AA sequence:RefSeq:WP_002608933.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008789733.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893202.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893200.1
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: similar to AA sequence:RefSeq:WP_019893197.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893196.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865898.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF016205.2
COORDINATES: similar to AA sequence:RefSeq:WP_008688707.1
GO:0008776 - acetate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006085 - acetyl-CoA biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:TIGR00594.1
GO:0006260 - DNA replication [Evidence IEA]; GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00559
ribosomal protein L21 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_019893180.1
COORDINATES: similar to AA sequence:RefSeq:WP_009271898.1
COORDINATES: similar to AA sequence:RefSeq:WP_008787855.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864189.1
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: similar to AA sequence:RefSeq:WP_008979389.1
3-phosphoglycerate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003864817.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_019893165.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_019893159.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009271911.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA]
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF021347.2
COORDINATES: protein motif:HMM:NF017452.2
COORDINATES: similar to AA sequence:RefSeq:WP_003865311.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_011702823.1
COORDINATES: similar to AA sequence:RefSeq:WP_006060853.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893144.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_019893143.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864174.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893139.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0052873 - FMN reductase (NADPH) activity [Evidence IEA]; GO:0008752 - FMN reductase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004799162.1
GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893133.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893132.1
COORDINATES: protein motif:HMM:NF013106.2
GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
biosynthetic peptidoglycan transglycosylase
COORDINATES: similar to AA sequence:RefSeq:WP_015536110.1
COORDINATES: protein motif:HMM:TIGR03709.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893128.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864045.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893122.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893121.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008688867.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864040.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012700.2
COORDINATES: similar to AA sequence:RefSeq:WP_015535855.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:NF020509.2
COORDINATES: similar to AA sequence:RefSeq:WP_006784186.1
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893101.1
COORDINATES: similar to AA sequence:RefSeq:WP_003865999.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_002608394.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893079.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893076.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893070.1
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: similar to AA sequence:RefSeq:WP_003539637.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004801620.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538120.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538117.1
COORDINATES: similar to AA sequence:RefSeq:WP_002607248.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893056.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893055.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893054.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893053.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291719.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893052.1
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892095.1
COORDINATES: protein motif:HMM:TIGR00792.1
GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - monoatomic cation transport [Evidence IEA]
glycoside-pentoside-hexuronide (GPH):cation symporter
COORDINATES: protein motif:HMM:NF028237.2
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008789338.1
COORDINATES: similar to AA sequence:RefSeq:WP_008789339.1
COORDINATES: protein motif:HMM:NF019311.2
COORDINATES: similar to AA sequence:RefSeq:WP_004465632.1
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_008791346.1
COORDINATES: protein motif:HMM:NF014156.2
COORDINATES: similar to AA sequence:RefSeq:WP_008979581.1
GO:0047334 - diphosphate-fructose-6-phosphate 1-phosphotransferase activity [Evidence IEA]
diphosphate--fructose-6-phosphate 1-phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019893051.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_000279412.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF014852.2
glycoside hydrolase family 20 zincin-like fold domain-containing protein
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008816596.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893043.1
ribonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019893042.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1
COORDINATES: similar to AA sequence:RefSeq:WP_003866030.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893038.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_019893037.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893036.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893035.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893034.1
COORDINATES: similar to AA sequence:RefSeq:WP_003866034.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893029.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008816828.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535214.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893026.1
COORDINATES: similar to AA sequence:RefSeq:WP_003535234.1
COORDINATES: similar to AA sequence:RefSeq:WP_003864133.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019893022.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893021.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690426.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893019.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893014.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019893010.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:NF013286.2
COORDINATES: similar to AA sequence:RefSeq:WP_003865219.1
COORDINATES: similar to AA sequence:RefSeq:WP_009272926.1
COORDINATES: similar to AA sequence:RefSeq:WP_019893002.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: protein motif:HMM:NF025105.2
COORDINATES: protein motif:HMM:NF013239.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892998.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892997.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017745.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892994.1
COORDINATES: protein motif:HMM:NF013214.2
COORDINATES: similar to AA sequence:RefSeq:WP_015535205.1
COORDINATES: similar to AA sequence:RefSeq:WP_015536309.1
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF019575.2
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002609071.1
competence type IV pilus major pilin ComGC
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006626806.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: protein motif:HMM:NF019945.2
COORDINATES: protein motif:HMM:NF015340.2
phage antirepressor KilAC domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003508847.1
COORDINATES: similar to AA sequence:RefSeq:WP_002362759.1
COORDINATES: similar to AA sequence:RefSeq:WP_002349524.1
COORDINATES: similar to AA sequence:RefSeq:WP_006426968.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102986.1
COORDINATES: similar to AA sequence:RefSeq:WP_008978722.1
COORDINATES: similar to AA sequence:RefSeq:WP_009270307.1
COORDINATES: similar to AA sequence:RefSeq:WP_009270350.1
COORDINATES: similar to AA sequence:RefSeq:WP_008819343.1
class I SAM-dependent DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004803040.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892969.1
COORDINATES: protein motif:HMM:NF013624.2
COORDINATES: protein motif:HMM:NF024151.2
COORDINATES: protein motif:HMM:NF012688.2
COORDINATES: protein motif:HMM:NF022379.2
COORDINATES: similar to AA sequence:RefSeq:WP_003864649.1
COORDINATES: protein motif:HMM:NF017856.2
COORDINATES: protein motif:HMM:TIGR01733.1
amino acid adenylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002609259.1
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892970.1
COORDINATES: similar to AA sequence:RefSeq:WP_013852513.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: similar to AA sequence:RefSeq:WP_004799293.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014867.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892388.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
COORDINATES: protein motif:HMM:NF014198.2
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009269698.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF021062.2
COORDINATES: protein motif:HMM:NF015057.2
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02464.1
COORDINATES: protein motif:HMM:NF024645.2
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892966.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892965.1
COORDINATES: similar to AA sequence:RefSeq:WP_002608997.1
YdiB; quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003864295.1
COORDINATES: similar to AA sequence:RefSeq:WP_008817543.1
COORDINATES: similar to AA sequence:RefSeq:WP_002608998.1
COORDINATES: similar to AA sequence:RefSeq:WP_002609002.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008817268.1
COORDINATES: similar to AA sequence:RefSeq:WP_008978340.1
COORDINATES: similar to AA sequence:RefSeq:WP_008817266.1
COORDINATES: protein motif:HMM:NF038245.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892962.1
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002606734.1
COORDINATES: similar to AA sequence:RefSeq:WP_002608556.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_019892959.1
GO:0090529 - cell septum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF037631.2
COORDINATES: similar to AA sequence:RefSeq:WP_002608798.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004609593.1
COORDINATES: similar to AA sequence:RefSeq:WP_005830549.1
COORDINATES: protein motif:HMM:NF014477.2
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013840464.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892951.1
RnfABCDGE type electron transport complex subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_015535221.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_003864987.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892948.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892947.1
RnfABCDGE type electron transport complex subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_019892946.1
COORDINATES: similar to AA sequence:RefSeq:WP_019892945.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
RnfABCDGE type electron transport complex subunit B
GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006060218.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004799238.1
COORDINATES: protein motif:HMM:NF016689.2
COORDINATES: similar to AA sequence:RefSeq:WP_006785317.1
COORDINATES: similar to AA sequence:RefSeq:WP_009271996.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_019892930.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892929.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017102.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892926.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892923.1
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF011494.0
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_004799853.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_019892919.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: protein motif:HMM:NF033483.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
Stk1 family PASTA domain-containing Ser/Thr kinase
COORDINATES: similar to AA sequence:RefSeq:WP_019892917.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_019892916.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019891945.1
COORDINATES: similar to AA sequence:RefSeq:WP_002608456.1
COORDINATES: similar to AA sequence:RefSeq:WP_009064824.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015535253.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_019892909.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: protein motif:HMM:NF016300.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892908.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019892906.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF012656.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006398668.1
N-acyl homoserine lactonase family protein
COORDINATES: protein motif:HMM:NF013209.2
COORDINATES: similar to AA sequence:RefSeq:WP_019892900.1
COORDINATES: protein motif:HMM:NF037716.2
COORDINATES: similar to AA sequence:RefSeq:WP_002151611.1
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016174.2
COORDINATES: protein motif:HMM:NF005491.0
GO:0008478 - pyridoxal kinase activity [Evidence IEA]
GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006504442.1
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: similar to AA sequence:RefSeq:WP_018281842.1
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC