Bradyrhizobium barranii subsp. barranii strain 323S2 plasmid pBb323S2a, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium; Bradyrhizobium barranii.
Strains of Bradyrhizobium barranii sp. nov. associated with legumes native to Canada are symbionts of soybeans and belong to different subspecies (subsp. barranii subsp. nov. and subsp. apii subsp. nov.) and symbiovars (sv. glycinearum and sv. septentrionale)
Int J Syst Evol Microbiol 72 (10) (2022)
Soybeans inoculated with root zone soils of Canadian native legumes harbour diverse and novel Bradyrhizobium spp. that possess agricultural potential
Erratum:[Syst Appl Microbiol. 2017 Dec;40(8):517. PMID: 29113688]
Submitted (18-NOV-2021) ORDC, Agriculture and Agri-Food Canada, 960 Carling Ave., Ottawa, Ontario K1A 0C6, Canada
Submitted (19-JUN-2020) ORDC, Agriculture and Agri-Food Canada, 960 Carling Ave., Ottawa, Ontario K1A 0C6, Canada
REFSEQ INFORMATION: The reference sequence is identical to\nCP088278.1.\nBacteria and source DNA available from Eden S.P. Bromfield,\nAgriculture and Agri-Food Canada, 960 Carling Ave., Ottawa ON K1A\n0C6.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: NOV-2021\nAssembly Method :: Flye v. v2.9\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 687.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/13/2022 12:54:39\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 11,061\nCDSs (total) :: 10,995\nGenes (coding) :: 10,354\nCDSs (with protein) :: 10,354\nGenes (RNA) :: 66\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 4\nPseudo Genes (total) :: 641\nCDSs (without protein) :: 641\nPseudo Genes (ambiguous residues) :: 0 of 641\nPseudo Genes (frameshifted) :: 332 of 641\nPseudo Genes (incomplete) :: 411 of 641\nPseudo Genes (internal stop) :: 43 of 641\nPseudo Genes (multiple problems) :: 133 of 641\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011084494.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018273713.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018273715.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018273716.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273717.1
COORDINATES: protein motif:HMM:NF025694.2
COORDINATES: similar to AA sequence:RefSeq:WP_018273719.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018273720.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273721.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273722.1
COORDINATES: similar to AA sequence:RefSeq:WP_014330968.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273724.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273725.1
COORDINATES: similar to AA sequence:RefSeq:WP_011084489.1
GO:0004803 - transposase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_032072965.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018273855.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013677.2
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_076612082.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS3-like element ISRj2 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_076611419.1
IS630-like element ISRj1 family transposase
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: similar to AA sequence:RefSeq:WP_011930905.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF017524.2
MobC family plasmid mobilization relaxosome protein
COORDINATES: similar to AA sequence:RefSeq:WP_018273792.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_009859469.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997470.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010398690.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974894.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008786797.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930898.1
COORDINATES: similar to AA sequence:RefSeq:WP_008121576.1
COORDINATES: similar to AA sequence:RefSeq:WP_011505047.1
COORDINATES: similar to AA sequence:RefSeq:WP_018459060.1
COORDINATES: similar to AA sequence:RefSeq:WP_018459061.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612137.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273804.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_009859458.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015822440.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273809.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424858.1
COORDINATES: similar to AA sequence:RefSeq:WP_012648963.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011578833.1
COORDINATES: similar to AA sequence:RefSeq:WP_015822442.1
COORDINATES: similar to AA sequence:RefSeq:WP_015822443.1
Mu transposase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009859457.1
COORDINATES: similar to AA sequence:RefSeq:WP_010669065.1
COORDINATES: similar to AA sequence:RefSeq:WP_019014761.1
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009859454.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018240809.1
COORDINATES: similar to AA sequence:RefSeq:WP_013913491.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013913793.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273814.1
COORDINATES: similar to AA sequence:RefSeq:WP_002718991.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011053406.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273816.1
COORDINATES: similar to AA sequence:RefSeq:WP_012564793.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273818.1
COORDINATES: similar to AA sequence:RefSeq:WP_012564795.1
COORDINATES: similar to AA sequence:RefSeq:WP_012564796.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011931085.1
COORDINATES: similar to AA sequence:RefSeq:WP_009859435.1
DUF3991 and toprim domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012564801.1
COORDINATES: similar to AA sequence:RefSeq:WP_009859433.1
COORDINATES: protein motif:HMM:NF015437.2
autoinducer binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009859431.1
COORDINATES: similar to AA sequence:RefSeq:WP_009859430.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009859429.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273831.1
COORDINATES: similar to AA sequence:RefSeq:WP_009859427.1
VirB4 family type IV secretion/conjugal transfer ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_018273833.1
COORDINATES: similar to AA sequence:RefSeq:WP_011931075.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273835.1
COORDINATES: similar to AA sequence:RefSeq:WP_018409504.1
COORDINATES: similar to AA sequence:RefSeq:WP_009859421.1
P-type conjugative transfer protein VirB9
COORDINATES: similar to AA sequence:RefSeq:WP_011931070.1
COORDINATES: similar to AA sequence:RefSeq:WP_011931069.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011931068.1
COORDINATES: similar to AA sequence:RefSeq:WP_011931067.1
COORDINATES: similar to AA sequence:RefSeq:WP_018319304.1
COORDINATES: protein motif:HMM:NF039739.1
COORDINATES: protein motif:HMM:NF012493.2
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01613.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018321625.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: similar to AA sequence:RefSeq:WP_018643008.1
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: similar to AA sequence:RefSeq:WP_042650430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012116569.1
COORDINATES: similar to AA sequence:RefSeq:WP_012778812.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611554.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611557.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_013845260.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018270215.1
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: similar to AA sequence:RefSeq:WP_018643003.1
COORDINATES: similar to AA sequence:RefSeq:WP_016874304.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_006021494.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_018348591.1
COORDINATES: protein motif:HMM:NF026968.2
COORDINATES: similar to AA sequence:RefSeq:WP_020268186.1
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: similar to AA sequence:RefSeq:WP_016847131.1
COORDINATES: similar to AA sequence:RefSeq:WP_011089033.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016847129.1
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: similar to AA sequence:RefSeq:WP_195211955.1
IS21-like element IS1631 family helper ATPase IstB
COORDINATES: similar to AA sequence:RefSeq:WP_086558236.1
COORDINATES: similar to AA sequence:RefSeq:WP_006615047.1
COORDINATES: similar to AA sequence:RefSeq:WP_011084512.1
COORDINATES: similar to AA sequence:RefSeq:WP_004112912.1
COORDINATES: similar to AA sequence:RefSeq:WP_011053401.1
COORDINATES: similar to AA sequence:RefSeq:WP_003510063.1
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: similar to AA sequence:RefSeq:WP_016447590.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612341.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF012307.2
reverse transcriptase domain-containing protein
COORDINATES: protein motif:HMM:NF033517.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273888.1
peptidase domain-containing ABC transporter
COORDINATES: similar to AA sequence:RefSeq:WP_008533948.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015926940.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611865.1
COORDINATES: similar to AA sequence:RefSeq:WP_012045311.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
COORDINATES: similar to AA sequence:RefSeq:WP_012354672.1
COORDINATES: similar to AA sequence:RefSeq:WP_011084505.1
COORDINATES: similar to AA sequence:RefSeq:WP_011084639.1
COORDINATES: similar to AA sequence:RefSeq:WP_011090936.1
IS21-like element ISFK1 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_011511226.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612338.1
COORDINATES: protein motif:HMM:NF012873.2
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: similar to AA sequence:RefSeq:WP_028714619.1
COORDINATES: similar to AA sequence:RefSeq:WP_015288241.1
COORDINATES: protein motif:HMM:NF019984.2
group II intron maturase-specific domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007803484.1
COORDINATES: similar to AA sequence:RefSeq:WP_015327141.1
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_011982903.1
COORDINATES: similar to AA sequence:RefSeq:WP_011090937.1
IS21-like element ISFK1 family helper ATPase IstB
COORDINATES: similar to AA sequence:RefSeq:WP_018273679.1
COORDINATES: similar to AA sequence:RefSeq:WP_010562368.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406695.1
COORDINATES: similar to AA sequence:RefSeq:WP_012275085.1
COORDINATES: similar to AA sequence:RefSeq:WP_016241516.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014003798.1
COORDINATES: similar to AA sequence:RefSeq:WP_007121146.1
COORDINATES: similar to AA sequence:RefSeq:WP_018391535.1
COORDINATES: similar to AA sequence:RefSeq:WP_011084703.1
COORDINATES: similar to AA sequence:RefSeq:WP_011511276.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011511275.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273922.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011511274.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273923.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007678055.1
COORDINATES: similar to AA sequence:RefSeq:WP_007597077.1
COORDINATES: similar to AA sequence:RefSeq:WP_007597078.1
COORDINATES: similar to AA sequence:RefSeq:WP_013500471.1
COORDINATES: similar to AA sequence:RefSeq:WP_011090513.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076612008.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015625217.1
COORDINATES: similar to AA sequence:RefSeq:WP_017335707.1
COORDINATES: protein motif:HMM:NF026115.2
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_015926997.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006424129.1
COORDINATES: similar to AA sequence:RefSeq:WP_016848250.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016848251.1
type II toxin-antitoxin system HipA family toxin
COORDINATES: protein motif:HMM:NF025713.2
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: similar to AA sequence:RefSeq:WP_009859187.1
COORDINATES: protein motif:HMM:NF025120.2
COORDINATES: similar to AA sequence:RefSeq:WP_011160371.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
BsuBI/PstI family type II restriction endonuclease
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_012319572.1
COORDINATES: similar to AA sequence:RefSeq:WP_012093350.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273661.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421934.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611503.1
COORDINATES: similar to AA sequence:RefSeq:WP_012330561.1
COORDINATES: protein motif:HMM:NF024013.2
COORDINATES: similar to AA sequence:RefSeq:WP_014490383.1
COORDINATES: similar to AA sequence:RefSeq:WP_016843076.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_039183842.1
IS1380-like element ISBdi2 family transposase
COORDINATES: protein motif:HMM:NF025388.2
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF012486.2
COORDINATES: protein motif:HMM:NF040700.1
VPA1262 family N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02612.1
COORDINATES: similar to AA sequence:RefSeq:WP_012649615.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331492.1
COORDINATES: similar to AA sequence:RefSeq:WP_008126234.1
COORDINATES: similar to AA sequence:RefSeq:WP_012340158.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611555.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612246.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_011810480.1
COORDINATES: similar to AA sequence:RefSeq:WP_017526881.1
dihydrodipicolinate synthase family protein
COORDINATES: protein motif:HMM:NF015038.2
COORDINATES: protein motif:HMM:NF025189.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611442.1
COORDINATES: similar to AA sequence:RefSeq:WP_006023179.1
COORDINATES: similar to AA sequence:RefSeq:WP_016848316.1
COORDINATES: similar to AA sequence:RefSeq:WP_007796339.1
COORDINATES: similar to AA sequence:RefSeq:WP_008831706.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase.; TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018269968.1
COORDINATES: similar to AA sequence:RefSeq:WP_018270224.1
COORDINATES: similar to AA sequence:RefSeq:WP_014761245.1
COORDINATES: similar to AA sequence:RefSeq:WP_014989244.1
COORDINATES: protein motif:HMM:NF021456.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611663.1
COORDINATES: similar to AA sequence:RefSeq:WP_011084462.1
IS701-like element ISBj6 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_008878010.1
COORDINATES: similar to AA sequence:RefSeq:WP_012640573.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611960.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611730.1
COORDINATES: protein motif:HMM:NF014081.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007609170.1
COORDINATES: similar to AA sequence:RefSeq:WP_009859417.1
COORDINATES: similar to AA sequence:RefSeq:WP_009859418.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273840.1
COORDINATES: similar to AA sequence:RefSeq:WP_009859420.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273838.1
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: similar to AA sequence:RefSeq:WP_018273647.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273646.1
COORDINATES: similar to AA sequence:RefSeq:WP_006023696.1
COORDINATES: similar to AA sequence:RefSeq:WP_011578767.1
COORDINATES: similar to AA sequence:RefSeq:WP_012564790.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273737.1
COORDINATES: similar to AA sequence:RefSeq:WP_008969967.1
COORDINATES: similar to AA sequence:RefSeq:WP_018270161.1
COORDINATES: similar to AA sequence:RefSeq:WP_014494435.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018644856.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014494437.1
COORDINATES: similar to AA sequence:RefSeq:WP_009859282.1
COORDINATES: similar to AA sequence:RefSeq:WP_007603390.1
COORDINATES: similar to AA sequence:RefSeq:WP_008886747.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611445.1
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF024811.2
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012379.2
COORDINATES: similar to AA sequence:RefSeq:WP_003386704.1
COORDINATES: similar to AA sequence:RefSeq:WP_004125972.1
COORDINATES: similar to AA sequence:RefSeq:WP_011512160.1
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024743.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008878011.1
COORDINATES: similar to AA sequence:RefSeq:WP_011239024.1
COORDINATES: similar to AA sequence:RefSeq:WP_006199979.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273949.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273947.1
COORDINATES: protein motif:HMM:NF013890.2
COORDINATES: similar to AA sequence:RefSeq:WP_018273626.1
COORDINATES: similar to AA sequence:RefSeq:WP_018263395.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF013625.2
peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011511217.1
COORDINATES: similar to AA sequence:RefSeq:WP_028755357.1
COORDINATES: similar to AA sequence:RefSeq:WP_019443645.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007608059.1
COORDINATES: similar to AA sequence:RefSeq:WP_016843881.1
COORDINATES: similar to AA sequence:RefSeq:WP_002718058.1