Alkalibacter rhizosphaerae strain ES005 chromosome, complete genome.
Bacteria; Firmicutes; Clostridia; Eubacteriales; Eubacteriaceae; Alkalibacter.
Alkalibacter marinus sp. nov., isolated from tidal flat sediment
Submitted (03-MAR-2021) Marine Biotechnology Research Center, Korea Institute of Ocean Science and Technology, 385, Haeyang-ro, Busan 49111, South Korea
REFSEQ INFORMATION: The reference sequence is identical to\nCP071444.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: FEB-2021\nAssembly Method :: PacBio_20K SMRT v. 2.3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 208.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 08/29/2022 12:45:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,451\nCDSs (total) :: 2,383\nGenes (coding) :: 2,338\nCDSs (with protein) :: 2,338\nGenes (RNA) :: 68\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 45\nCDSs (without protein) :: 45\nPseudo Genes (ambiguous residues) :: 0 of 45\nPseudo Genes (frameshifted) :: 31 of 45\nPseudo Genes (incomplete) :: 15 of 45\nPseudo Genes (internal stop) :: 0 of 45\nPseudo Genes (multiple problems) :: 1 of 45\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Alkalibacter rhizosphaerae
COORDINATES: similar to AA sequence:RefSeq:WP_008516015.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012063178.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012063179.1
COORDINATES: similar to AA sequence:RefSeq:WP_005946011.1
COORDINATES: similar to AA sequence:RefSeq:WP_010251876.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF021485.2
COORDINATES: similar to AA sequence:RefSeq:WP_009322593.1
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004619713.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_012063296.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011722851.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009889257.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063299.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_004458399.1
COORDINATES: similar to AA sequence:RefSeq:WP_009891800.1
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: protein motif:HMM:NF025164.2
anti sigma factor C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: similar to AA sequence:RefSeq:WP_006597613.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03166.1
COORDINATES: protein motif:HMM:TIGR02230.1
COORDINATES: protein motif:HMM:NF024368.2
COORDINATES: similar to AA sequence:RefSeq:WP_006521550.1
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006521551.1
COORDINATES: protein motif:HMM:NF012645.2
COORDINATES: protein motif:HMM:TIGR00962.1
COORDINATES: protein motif:HMM:NF012456.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF013381.2
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017825351.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF028293.2
COORDINATES: similar to AA sequence:RefSeq:WP_005378494.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061352.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019226464.1
COORDINATES: similar to AA sequence:RefSeq:WP_015042986.1
COORDINATES: similar to AA sequence:RefSeq:WP_019226466.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014254609.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020490918.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_019226469.1
COORDINATES: similar to AA sequence:RefSeq:WP_020490919.1
COORDINATES: similar to AA sequence:RefSeq:WP_019225872.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051404.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355441.1
COORDINATES: protein motif:HMM:NF020509.2
toll/interleukin-1 receptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014185249.1
COORDINATES: similar to AA sequence:RefSeq:WP_007785698.1
COORDINATES: similar to AA sequence:RefSeq:WP_014519103.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008515839.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007784067.1
3-isopropylmalate dehydratase small subunit
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362125.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_013380678.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: similar to AA sequence:RefSeq:WP_013378874.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF021524.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: protein motif:HMM:NF003194.0
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF024983.2
COORDINATES: protein motif:HMM:NF038196.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR03064.1
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO:0045184 - establishment of protein localization [Evidence IEA]; GO:0016485 - protein processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: similar to AA sequence:RefSeq:WP_009171163.1
COORDINATES: similar to AA sequence:RefSeq:WP_003511951.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: similar to AA sequence:RefSeq:WP_007286628.1
GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO:0015824 - proline transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014827656.1
COORDINATES: similar to AA sequence:RefSeq:WP_002844018.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003540696.1
COORDINATES: protein motif:HMM:NF020940.2
COORDINATES: similar to AA sequence:RefSeq:WP_017414117.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014356515.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine, L-proline or other amino acids, choline, carnitine, etc. The substrate specificity is best determined from the substrate-binding subunit, rather than this subunit, as it interacts with the permease subunit and not with substrate directly; Derived by automated computational analysis using gene prediction method: Protein Homology.
betaine/proline/choline family ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014118515.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356513.1
COORDINATES: protein motif:HMM:NF015995.2
glycine/betaine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF019474.2
GO:0016787 - hydrolase activity [Evidence IEA]
alpha/beta hydrolase fold domain-containing protein
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF024055.2
COORDINATES: similar to AA sequence:RefSeq:WP_020492102.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253950.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001229392.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063792.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014356331.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00657.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014703.2
COORDINATES: similar to AA sequence:RefSeq:WP_010249692.1
COORDINATES: similar to AA sequence:RefSeq:WP_006440153.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_013380371.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010244094.1
COORDINATES: similar to AA sequence:RefSeq:WP_020814983.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011878251.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013823424.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063778.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007060049.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004612595.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360843.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
TIGR03905 family TSCPD domain-containing protein
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF013279.2
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: protein motif:HMM:NF028007.2
COORDINATES: protein motif:HMM:TIGR02872.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]
sporulation integral membrane protein YtvI
COORDINATES: protein motif:HMM:NF019413.2
COORDINATES: similar to AA sequence:RefSeq:WP_011987074.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_006523916.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
decarboxylating 6-phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:TIGR00871.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006523914.1
COORDINATES: protein motif:HMM:NF012675.2
COORDINATES: protein motif:HMM:NF014939.2
COORDINATES: similar to AA sequence:RefSeq:WP_006442264.1
COORDINATES: protein motif:HMM:NF011080.0
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02104.1
GO:0051060 - pullulanase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003441937.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_011721333.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02092.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: similar to AA sequence:RefSeq:WP_019189818.1
COORDINATES: similar to AA sequence:RefSeq:WP_003540319.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909845.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517139.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:NF013640.2
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:TIGR01175.1
GO:0009297 - pilus assembly [Evidence IEA]
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: similar to AA sequence:RefSeq:WP_011877408.1
COORDINATES: similar to AA sequence:RefSeq:WP_011106342.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010077200.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_012159493.1
COORDINATES: similar to AA sequence:RefSeq:WP_015484811.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355383.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355382.1
COORDINATES: protein motif:HMM:NF017902.2
COORDINATES: similar to AA sequence:RefSeq:WP_003516971.1
COORDINATES: similar to AA sequence:RefSeq:WP_002597372.1
COORDINATES: similar to AA sequence:RefSeq:WP_010292902.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355376.1
COORDINATES: similar to AA sequence:RefSeq:WP_003541931.1
COORDINATES: similar to AA sequence:RefSeq:WP_008981805.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909880.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004622730.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: similar to AA sequence:RefSeq:WP_009254021.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF012970.2
COORDINATES: protein motif:HMM:NF019966.2
COORDINATES: similar to AA sequence:RefSeq:WP_014355833.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_013360791.1
GO:0016829 - lyase activity [Evidence IEA]
GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013381563.1
COORDINATES: similar to AA sequence:RefSeq:WP_006857407.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_014356328.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_007049970.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014356324.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013417.2
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009889094.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060075.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012032435.1
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: protein motif:HMM:NF001688.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002194540.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF014244.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_012159372.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014794878.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013380785.1
GO:0033862 - UMP kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006718241.1
COORDINATES: similar to AA sequence:RefSeq:WP_013841894.1
COORDINATES: similar to AA sequence:RefSeq:WP_008678396.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
GTP-sensing pleiotropic transcriptional regulator CodY
COORDINATES: similar to AA sequence:RefSeq:WP_014356317.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_019225608.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003428420.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012032850.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF009150.0
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013381174.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005425017.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013381176.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013381177.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004627045.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012200422.1
COORDINATES: similar to AA sequence:RefSeq:WP_003369516.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356494.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: protein motif:HMM:NF016205.2
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015358829.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013272587.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008411959.1
GO:0000036 - acyl carrier activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014356500.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015358471.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_013361567.1
COORDINATES: protein motif:HMM:NF010191.0
COORDINATES: similar to AA sequence:RefSeq:WP_016148674.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF008165.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009203019.1
COORDINATES: similar to AA sequence:RefSeq:WP_003493225.1
Asp23/Gls24 family envelope stress response protein
COORDINATES: similar to AA sequence:RefSeq:WP_006716553.1
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF033483.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
Stk1 family PASTA domain-containing Ser/Thr kinase
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_003365995.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF011494.0
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_013362065.1
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013725699.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_023438096.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_013381604.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: protein motif:HMM:NF013813.2
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF017633.2
NFACT RNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: similar to AA sequence:RefSeq:WP_010243185.1
COORDINATES: protein motif:HMM:NF037631.2
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: protein motif:HMM:NF016363.2
COORDINATES: protein motif:HMM:TIGR00044.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF024112.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018589836.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0004367 - glycerol-3-phosphate dehydrogenase [NAD+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004846195.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004066688.1
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_012620392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356548.1
SoxR reducing system RseC family protein
COORDINATES: protein motif:HMM:NF014624.2
metal-sensitive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013381769.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03994.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003426448.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361518.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012159567.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF018058.2
COORDINATES: protein motif:HMM:TIGR00966.2
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909930.1
COORDINATES: similar to AA sequence:RefSeq:WP_002601552.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0031179 - peptide modification [Evidence IEA]
thioether cross-link-forming SCIFF peptide maturase
COORDINATES: similar to AA sequence:RefSeq:WP_005352344.1
COORDINATES: protein motif:HMM:TIGR00739.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159574.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017825157.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_009757123.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_014356072.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00257.1
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: similar to AA sequence:RefSeq:WP_015260876.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573506.1
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020492647.1
COORDINATES: similar to AA sequence:RefSeq:WP_013841743.1
COORDINATES: similar to AA sequence:RefSeq:WP_007785833.1
COORDINATES: similar to AA sequence:RefSeq:WP_013841741.1
COORDINATES: similar to AA sequence:RefSeq:WP_005810340.1
COORDINATES: protein motif:HMM:NF021788.2
COORDINATES: similar to AA sequence:RefSeq:WP_018212205.1
COORDINATES: similar to AA sequence:RefSeq:WP_013238367.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF037678.2
COORDINATES: protein motif:HMM:TIGR01297.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF017722.2
COORDINATES: similar to AA sequence:RefSeq:WP_015358605.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
Fe-S cluster assembly scaffold protein NifU
COORDINATES: similar to AA sequence:RefSeq:WP_011861166.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003516233.1
COORDINATES: protein motif:HMM:NF017016.2
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:NF021489.2
COORDINATES: similar to AA sequence:RefSeq:WP_007049709.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF014533.2
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_009002061.1
COORDINATES: similar to AA sequence:RefSeq:WP_005343284.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00715.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014357348.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_011948631.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02469.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: protein motif:HMM:TIGR00312.2
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: similar to AA sequence:RefSeq:WP_011989291.1
COORDINATES: protein motif:HMM:NF017944.2
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004443772.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_006571656.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361215.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003381526.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013360493.1
COORDINATES: protein motif:HMM:NF014420.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014597.2
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0006824 - cobalt ion transport [Evidence IEA]
energy-coupling factor ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003434202.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016021 - integral component of membrane [Evidence IEA]
GO:0000041 - transition metal ion transport [Evidence IEA]
energy-coupling factor ABC transporter permease
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_015758458.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073354.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964710.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964709.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964708.1
COORDINATES: similar to AA sequence:RefSeq:WP_003357789.1
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012065628.1
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_020815358.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011459575.1
COORDINATES: similar to AA sequence:RefSeq:WP_014185211.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015359991.1
COORDINATES: similar to AA sequence:RefSeq:WP_007429757.1
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010249761.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0008216 - spermidine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003442595.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_013360885.1
COORDINATES: protein motif:HMM:NF025064.2
GO:0005575 - cellular_component [Evidence IEA]
GO:0016740 - transferase activity [Evidence IEA]
DegV family EDD domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013360887.1
COORDINATES: similar to AA sequence:RefSeq:WP_005816655.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013071.2
COORDINATES: protein motif:HMM:NF037099.2
COORDINATES: similar to AA sequence:RefSeq:WP_008909764.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_011971772.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361127.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_017752358.1
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
GO:0034220 - ion transmembrane transport [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_007050147.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013381809.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:TIGR00539.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255876.1
COORDINATES: protein motif:HMM:NF013665.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002844745.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013121487.1
methylenetetrahydrofolate reductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF037527.2
COORDINATES: similar to AA sequence:RefSeq:WP_016147773.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF011443.0
GO:0016462 - pyrophosphatase activity [Evidence IEA]
putative manganese-dependent inorganic diphosphatase
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF016689.2
COORDINATES: similar to AA sequence:RefSeq:WP_015924095.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015543000.1
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_003229415.1
COORDINATES: similar to AA sequence:RefSeq:WP_006440721.1
cysteine-rich small domain-containing protein
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_017750996.1
COORDINATES: similar to AA sequence:RefSeq:WP_008722784.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012449771.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007782515.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_014354828.1
COORDINATES: protein motif:HMM:NF008751.0
GO:0043828 - tRNA 2-selenouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063663.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015924144.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516328.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015925163.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007048884.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_014254892.1
COORDINATES: protein motif:HMM:NF000907.0
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006598471.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005612573.1
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: protein motif:HMM:NF018645.2
COORDINATES: similar to AA sequence:RefSeq:WP_006521687.1
COORDINATES: similar to AA sequence:RefSeq:WP_003428258.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: similar to AA sequence:RefSeq:WP_007048879.1
COORDINATES: similar to AA sequence:RefSeq:WP_013380820.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909671.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007060003.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159246.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006716637.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003371191.1
COORDINATES: protein motif:HMM:NF017734.2
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:TIGR02614.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_014795210.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:TIGR01085.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003444067.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_012634919.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_013362115.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_014355707.1
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355705.1
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159461.1
COORDINATES: similar to AA sequence:RefSeq:WP_007049280.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909828.1
COORDINATES: protein motif:HMM:TIGR01280.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: protein motif:HMM:NF013012.2
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF015721.2
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: similar to AA sequence:RefSeq:WP_012058714.1
COORDINATES: similar to AA sequence:RefSeq:WP_004454709.1
COORDINATES: similar to AA sequence:RefSeq:WP_009290054.1
PTS glucitol/sorbitol transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_012101106.1
PTS glucitol/sorbitol transporter subunit IIB
COORDINATES: similar to AA sequence:RefSeq:WP_007285350.1
PTS glucitol/sorbitol transporter subunit IIC
COORDINATES: protein motif:HMM:NF018611.2
COORDINATES: protein motif:HMM:NF016114.2
COORDINATES: similar to AA sequence:RefSeq:WP_012103657.1
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: protein motif:HMM:NF013067.2
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00472.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014356364.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_011721843.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908023.1
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015943638.1
COORDINATES: similar to AA sequence:RefSeq:WP_006441872.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_014355755.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008391538.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014477.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: similar to AA sequence:RefSeq:WP_014356778.1
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: similar to AA sequence:RefSeq:WP_004842662.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014354694.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354693.1
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005349008.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014354690.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064483.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658661.1
COORDINATES: similar to AA sequence:RefSeq:WP_013238708.1
COORDINATES: similar to AA sequence:RefSeq:WP_013382525.1
COORDINATES: similar to AA sequence:RefSeq:WP_019849560.1
COORDINATES: similar to AA sequence:RefSeq:WP_007779597.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015358687.1
COORDINATES: similar to AA sequence:RefSeq:WP_016295108.1
COORDINATES: similar to AA sequence:RefSeq:WP_020074152.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_009528949.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381798.1
COORDINATES: similar to AA sequence:RefSeq:WP_017751430.1
COORDINATES: protein motif:HMM:TIGR00147.1
GO:0001727 - lipid kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_014255430.1
cofactor-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_010235900.1
COORDINATES: similar to AA sequence:RefSeq:WP_015044289.1
COORDINATES: similar to AA sequence:RefSeq:WP_003357435.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015358645.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00379
cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012062401.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009250246.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062399.1
COORDINATES: protein motif:HMM:NF024641.2
COORDINATES: similar to AA sequence:RefSeq:WP_012062396.1
GO:0005451 - monovalent cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_012062395.1
GO:0015075 - ion transmembrane transporter activity [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_005808031.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_011461591.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005808027.1
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_015943320.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: similar to AA sequence:RefSeq:WP_003515279.1
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: similar to AA sequence:RefSeq:WP_007064226.1
methyltetrahydrofolate cobalamin methyltransferase
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020487717.1
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006793 - phosphorus metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020492186.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008392254.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005348443.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013658958.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461145.1
COORDINATES: protein motif:HMM:NF016292.2
COORDINATES: similar to AA sequence:RefSeq:WP_017413792.1
COORDINATES: protein motif:HMM:NF028468.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009533490.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016208116.1
COORDINATES: similar to AA sequence:RefSeq:WP_005936868.1
COORDINATES: similar to AA sequence:RefSeq:WP_006857401.1
COORDINATES: similar to AA sequence:RefSeq:WP_016208113.1
COORDINATES: similar to AA sequence:RefSeq:WP_005346460.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005346457.1
COORDINATES: similar to AA sequence:RefSeq:WP_006565745.1
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: similar to AA sequence:RefSeq:WP_017415213.1
COORDINATES: protein motif:HMM:NF024772.2
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971769.1
COORDINATES: similar to AA sequence:RefSeq:WP_013823947.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_006779152.1
COORDINATES: similar to AA sequence:RefSeq:WP_015042943.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_002604943.1
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012400.2
COORDINATES: similar to AA sequence:RefSeq:WP_018598435.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_004075478.1
COORDINATES: similar to AA sequence:RefSeq:WP_246892337.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119629.1
COORDINATES: similar to AA sequence:RefSeq:WP_004618515.1
COORDINATES: protein motif:HMM:NF018884.2
COORDINATES: protein motif:HMM:NF014904.2
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: similar to AA sequence:RefSeq:WP_014355079.1
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: similar to AA sequence:RefSeq:WP_013381338.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013725002.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360356.1
COORDINATES: similar to AA sequence:RefSeq:WP_012201129.1
COORDINATES: protein motif:HMM:TIGR03710.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012282143.1
COORDINATES: similar to AA sequence:RefSeq:WP_003229296.1
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_000092798.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF015987.2
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF014900.2
COORDINATES: protein motif:HMM:TIGR02494.1
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
COORDINATES: protein motif:HMM:NF021636.2
COORDINATES: similar to AA sequence:RefSeq:WP_014827407.1
COORDINATES: similar to AA sequence:RefSeq:WP_002588152.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625775.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018597737.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014254931.1
COORDINATES: similar to AA sequence:RefSeq:WP_010243500.1
COORDINATES: protein motif:HMM:NF024700.2
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014354978.1
COORDINATES: similar to AA sequence:RefSeq:WP_006779960.1
COORDINATES: similar to AA sequence:RefSeq:WP_010075459.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_014903598.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005945535.1
COORDINATES: protein motif:HMM:NF023251.2
COORDINATES: similar to AA sequence:RefSeq:WP_012199517.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_009267299.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: similar to AA sequence:RefSeq:WP_009245250.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006521296.1
COORDINATES: similar to AA sequence:RefSeq:WP_008374465.1
COORDINATES: similar to AA sequence:RefSeq:WP_003375165.1
COORDINATES: similar to AA sequence:RefSeq:WP_005364849.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966894.1
COORDINATES: similar to AA sequence:RefSeq:WP_005364842.1
COORDINATES: protein motif:HMM:NF017509.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:NF016064.2
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014795907.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: protein motif:HMM:NF027787.2
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: protein motif:HMM:NF012790.2
COORDINATES: similar to AA sequence:RefSeq:WP_003429152.1
COORDINATES: similar to AA sequence:RefSeq:WP_011878838.1
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:NF013481.2
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017212519.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: similar to AA sequence:RefSeq:WP_007064082.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: similar to AA sequence:RefSeq:WP_007062361.1
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: similar to AA sequence:RefSeq:WP_016438525.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006356393.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060725.1
COORDINATES: protein motif:HMM:TIGR00945.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062257.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_012159988.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159986.1
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015614651.1
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013362259.1
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_013842761.1
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:TIGR03915.1
TIGR03915 family putative DNA repair protein
COORDINATES: protein motif:HMM:NF019314.2
COORDINATES: similar to AA sequence:RefSeq:WP_010296344.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF025946.2
COORDINATES: similar to AA sequence:RefSeq:WP_005814175.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF013126.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014186.2
GO:0032977 - membrane insertase activity [Evidence IEA]
YidC/Oxa1 family membrane protein insertase
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: similar to AA sequence:RefSeq:WP_015359306.1
COORDINATES: protein motif:HMM:NF015000.2
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016207876.1
COORDINATES: protein motif:HMM:NF016430.2
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF024945.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018594571.1
COORDINATES: similar to AA sequence:RefSeq:WP_003497523.1
COORDINATES: protein motif:HMM:NF024063.2
COORDINATES: similar to AA sequence:RefSeq:WP_013382588.1
COORDINATES: similar to AA sequence:RefSeq:WP_013382589.1
GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014253546.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_015757152.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019845.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF040311.1
COORDINATES: similar to AA sequence:RefSeq:WP_013821390.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120825.1
COORDINATES: protein motif:HMM:TIGR01813.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_012048283.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355910.1
COORDINATES: protein motif:HMM:NF024626.2
COORDINATES: protein motif:HMM:NF024916.2
COORDINATES: protein motif:HMM:NF024376.2
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006353717.1
COORDINATES: similar to AA sequence:RefSeq:WP_013291595.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413584.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002594407.1
GO:0047559 - 3-dehydro-L-gulonate 2-dehydrogenase activity [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006855505.1
COORDINATES: similar to AA sequence:RefSeq:WP_008976434.1
COORDINATES: similar to AA sequence:RefSeq:WP_009060015.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_020073547.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394950.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012335.2
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009445702.1
COORDINATES: protein motif:HMM:NF018513.2
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_002566704.1
COORDINATES: similar to AA sequence:RefSeq:WP_007869761.1
COORDINATES: similar to AA sequence:RefSeq:WP_002587266.1
COORDINATES: similar to AA sequence:RefSeq:WP_007861583.1
FadR/GntR family transcriptional regulator
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: similar to AA sequence:RefSeq:WP_008720195.1
COORDINATES: similar to AA sequence:RefSeq:WP_009214165.1
COORDINATES: similar to AA sequence:RefSeq:WP_002604501.1
COORDINATES: similar to AA sequence:RefSeq:WP_003409275.1
COORDINATES: protein motif:HMM:TIGR00022.1
COORDINATES: similar to AA sequence:RefSeq:WP_006520245.1
COORDINATES: similar to AA sequence:RefSeq:WP_003244145.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586558.1
COORDINATES: similar to AA sequence:RefSeq:WP_015357773.1
COORDINATES: similar to AA sequence:RefSeq:WP_009060139.1
COORDINATES: similar to AA sequence:RefSeq:WP_006875486.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073561.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073562.1
COORDINATES: similar to AA sequence:RefSeq:WP_009321813.1
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: similar to AA sequence:RefSeq:WP_016149076.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971275.1
COORDINATES: similar to AA sequence:RefSeq:WP_004071357.1
COORDINATES: similar to AA sequence:RefSeq:WP_009003781.1
COORDINATES: similar to AA sequence:RefSeq:WP_004071360.1
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: similar to AA sequence:RefSeq:WP_013381926.1
COORDINATES: similar to AA sequence:RefSeq:WP_007783673.1
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007050778.1
COORDINATES: protein motif:HMM:TIGR00126.1
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: protein motif:HMM:NF024240.2
COORDINATES: protein motif:HMM:NF014091.2
COORDINATES: protein motif:HMM:NF016310.2
aconitase X catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: similar to AA sequence:RefSeq:WP_010233144.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007858013.1
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: protein motif:HMM:NF012579.2
BglG family transcription antiterminator
COORDINATES: protein motif:HMM:NF015132.2
COORDINATES: protein motif:HMM:NF021028.2
COORDINATES: protein motif:HMM:NF015140.2
COORDINATES: protein motif:HMM:NF025620.2
carbohydrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF039402.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362371.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF024144.2
cadherin-like beta sandwich domain-containing protein
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014097094.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: similar to AA sequence:RefSeq:WP_014793367.1
COORDINATES: similar to AA sequence:RefSeq:WP_003525074.1
COORDINATES: similar to AA sequence:RefSeq:WP_002992300.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_002075262.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000734429.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_001028293.1
capsular polysaccharide biosynthesis protein CapF
COORDINATES: similar to AA sequence:RefSeq:WP_012201501.1
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF016357.2
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257119.1
COORDINATES: similar to AA sequence:RefSeq:WP_003508183.1
COORDINATES: protein motif:HMM:TIGR02436.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360658.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005949990.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:TIGR01007.1
CpsD/CapB family tyrosine-protein kinase
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: protein motif:HMM:NF022597.2
COORDINATES: similar to AA sequence:RefSeq:WP_009614196.1
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_002582387.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: protein motif:HMM:NF013308.2
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_015357814.1
COORDINATES: protein motif:HMM:TIGR01216.1
COORDINATES: similar to AA sequence:RefSeq:WP_005355811.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971490.1
COORDINATES: similar to AA sequence:RefSeq:WP_010241191.1
COORDINATES: protein motif:HMM:TIGR01145.1
COORDINATES: protein motif:HMM:NF009992.0
COORDINATES: similar to AA sequence:RefSeq:WP_014354630.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: similar to AA sequence:RefSeq:WP_014354628.1
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971482.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515460.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008676599.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003473369.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein arginine phosphatase
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160418.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF014471.2
COORDINATES: similar to AA sequence:RefSeq:WP_009246877.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_013119705.1
COORDINATES: protein motif:HMM:NF015672.2
COORDINATES: similar to AA sequence:RefSeq:WP_008515396.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059153.1
COORDINATES: similar to AA sequence:RefSeq:WP_004626005.1
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: similar to AA sequence:RefSeq:WP_004463886.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625495.1
COORDINATES: protein motif:HMM:TIGR03652.1
GO:0005506 - iron ion binding [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
iron-sulfur cluster repair di-iron protein
COORDINATES: similar to AA sequence:RefSeq:WP_003514399.1
COORDINATES: protein motif:HMM:NF017856.2
COORDINATES: similar to AA sequence:RefSeq:WP_003493565.1
S1-like domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011590753.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014637054.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589930.1
COORDINATES: similar to AA sequence:RefSeq:WP_015943692.1
COORDINATES: similar to AA sequence:RefSeq:WP_008410409.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: similar to AA sequence:RefSeq:WP_008907859.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060445.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010241014.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:TIGR00560.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161784.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009203342.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017212643.1
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: similar to AA sequence:RefSeq:WP_020073357.1
tRNA 2-thiocytidine biosynthesis protein TtcA
COORDINATES: similar to AA sequence:RefSeq:WP_013840897.1
COORDINATES: protein motif:HMM:NF022378.2
COORDINATES: similar to AA sequence:RefSeq:WP_010243914.1
COORDINATES: similar to AA sequence:RefSeq:WP_018305249.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362233.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013362234.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362235.1
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014825361.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658431.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064742.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357506.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064339.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253544.1
COORDINATES: protein motif:HMM:NF015513.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:TIGR03827.1
putative beta-lysine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011098779.1
COORDINATES: similar to AA sequence:RefSeq:WP_014827738.1
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: similar to AA sequence:RefSeq:WP_014186265.1
GO:0050126 - N-carbamoylputrescine amidase activity [Evidence IEA]
GO:0009446 - putrescine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013623902.1
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: similar to AA sequence:RefSeq:WP_007783151.1
GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008680044.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394491.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00711.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003407011.1
COORDINATES: similar to AA sequence:RefSeq:WP_002581081.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356605.1
COORDINATES: similar to AA sequence:RefSeq:WP_011010003.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361638.1
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_014356610.1
COORDINATES: similar to AA sequence:RefSeq:WP_018306904.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356612.1
COORDINATES: protein motif:HMM:NF014298.2
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_015263344.1
GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
dTDP-4-amino-4,6-dideoxygalactose transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_002603117.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356616.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002603121.1
COORDINATES: similar to AA sequence:RefSeq:WP_013280486.1
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: similar to AA sequence:RefSeq:WP_013362086.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413785.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013238225.1
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:TIGR00792.1
GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - cation transport [Evidence IEA]
glycoside-pentoside-hexuronide (GPH):cation symporter
COORDINATES: protein motif:HMM:NF012995.2
COORDINATES: similar to AA sequence:RefSeq:WP_015044812.1
COORDINATES: similar to AA sequence:RefSeq:WP_014902618.1
COORDINATES: similar to AA sequence:RefSeq:WP_012471001.1
COORDINATES: protein motif:HMM:NF024230.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:NF018448.2
COORDINATES: similar to AA sequence:RefSeq:WP_005355978.1
COORDINATES: protein motif:HMM:NF024601.2
COORDINATES: protein motif:HMM:NF024702.2
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003431288.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF006941.0
COORDINATES: protein motif:HMM:NF024799.2
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_009248267.1
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF010675.0
diphosphate--fructose-6-phosphate 1-phosphotransferase
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013119543.1
LytTR family transcriptional regulator DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015410.2
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
DUF294 nucleotidyltransferase-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR03648.1
COORDINATES: protein motif:HMM:TIGR03647.1
COORDINATES: protein motif:HMM:TIGR00573.1
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008411248.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: protein motif:HMM:NF013086.2
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: protein motif:HMM:NF039496.1
COORDINATES: similar to AA sequence:RefSeq:WP_008676747.1
COORDINATES: similar to AA sequence:RefSeq:WP_014520971.1
COORDINATES: similar to AA sequence:RefSeq:WP_003355771.1
GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008980397.1
COORDINATES: similar to AA sequence:RefSeq:WP_005606293.1
GO:0005507 - copper ion binding [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016208141.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062803.1
iron export ABC transporter permease subunit FetB
COORDINATES: similar to AA sequence:RefSeq:WP_013842707.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354900.1
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_002602603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011641575.1
COORDINATES: similar to AA sequence:RefSeq:WP_002602565.1
COORDINATES: protein motif:HMM:NF024107.2
COORDINATES: protein motif:HMM:NF022805.2
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: similar to AA sequence:RefSeq:WP_014792542.1
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015261106.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657647.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015617571.1
COORDINATES: similar to AA sequence:RefSeq:WP_008516921.1
COORDINATES: similar to AA sequence:RefSeq:WP_008516920.1
COORDINATES: similar to AA sequence:RefSeq:WP_004079892.1
COORDINATES: similar to AA sequence:RefSeq:WP_009002977.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062736.1
COORDINATES: similar to AA sequence:RefSeq:WP_005212782.1
COORDINATES: similar to AA sequence:RefSeq:WP_002573143.1
COORDINATES: similar to AA sequence:RefSeq:WP_020815017.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_013976981.1
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF025393.2
COORDINATES: similar to AA sequence:RefSeq:WP_014312313.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010246493.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004629872.1
COORDINATES: similar to AA sequence:RefSeq:WP_016295781.1
COORDINATES: protein motif:HMM:NF018933.2
COORDINATES: similar to AA sequence:RefSeq:WP_013361849.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354885.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009888169.1
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: protein motif:HMM:NF040570.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014357284.1
COORDINATES: protein motif:HMM:NF024076.2
COORDINATES: similar to AA sequence:RefSeq:WP_012168287.1
COORDINATES: protein motif:HMM:NF022633.2
COORDINATES: similar to AA sequence:RefSeq:WP_019224863.1
COORDINATES: protein motif:HMM:NF014593.2
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: similar to AA sequence:RefSeq:WP_009325351.1
COORDINATES: similar to AA sequence:RefSeq:WP_012259899.1
COORDINATES: protein motif:HMM:NF013964.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: similar to AA sequence:RefSeq:WP_003499415.1
COORDINATES: similar to AA sequence:RefSeq:WP_009295862.1
COORDINATES: protein motif:HMM:NF016895.2
COORDINATES: similar to AA sequence:RefSeq:WP_004103219.1
peptidoglycan recognition protein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015926184.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102971.1
COORDINATES: similar to AA sequence:RefSeq:WP_019155104.1
COORDINATES: protein motif:HMM:NF025945.2
siphovirus ReqiPepy6 Gp37-like family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019155106.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102975.1
COORDINATES: similar to AA sequence:RefSeq:WP_008423823.1
COORDINATES: similar to AA sequence:RefSeq:WP_008423822.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244585.1
COORDINATES: similar to AA sequence:RefSeq:WP_009052881.1
COORDINATES: similar to AA sequence:RefSeq:WP_014387043.1
COORDINATES: similar to AA sequence:RefSeq:WP_018664395.1
COORDINATES: similar to AA sequence:RefSeq:WP_012268680.1
COORDINATES: similar to AA sequence:RefSeq:WP_015566397.1
GO:0016032 - viral process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000121277.1
COORDINATES: similar to AA sequence:RefSeq:WP_015926199.1
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009266518.1
COORDINATES: similar to AA sequence:RefSeq:WP_003495941.1
COORDINATES: similar to AA sequence:RefSeq:WP_010235038.1
COORDINATES: similar to AA sequence:RefSeq:WP_019213985.1
COORDINATES: similar to AA sequence:RefSeq:WP_009320857.1
phage terminase small subunit P27 family
COORDINATES: similar to AA sequence:RefSeq:WP_005947597.1
COORDINATES: similar to AA sequence:RefSeq:WP_011100100.1
COORDINATES: similar to AA sequence:RefSeq:WP_004058640.1
COORDINATES: similar to AA sequence:RefSeq:WP_020817078.1
COORDINATES: similar to AA sequence:RefSeq:WP_003499483.1
COORDINATES: similar to AA sequence:RefSeq:WP_004070875.1
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019278795.1
COORDINATES: similar to AA sequence:RefSeq:WP_004070887.1
COORDINATES: similar to AA sequence:RefSeq:WP_008117720.1
COORDINATES: similar to AA sequence:RefSeq:WP_006524187.1
COORDINATES: similar to AA sequence:RefSeq:WP_004058622.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016285791.1
COORDINATES: similar to AA sequence:RefSeq:WP_007790154.1
COORDINATES: similar to AA sequence:RefSeq:WP_005211579.1
COORDINATES: similar to AA sequence:RefSeq:WP_002531043.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838244.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838246.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838247.1
COORDINATES: protein motif:HMM:NF024758.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019161577.1
COORDINATES: similar to AA sequence:RefSeq:WP_008754518.1
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: similar to AA sequence:RefSeq:WP_005422953.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379843.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014262212.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290621.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213385.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461352.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461351.1
COORDINATES: protein motif:HMM:NF019236.2
COORDINATES: protein motif:HMM:NF013793.2
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF016852.2
COORDINATES: similar to AA sequence:RefSeq:WP_015045179.1
adenylyltransferase/cytidyltransferase family protein
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:TIGR03025.1
COORDINATES: similar to AA sequence:RefSeq:WP_005937751.1
COORDINATES: protein motif:HMM:NF016668.2
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: similar to AA sequence:RefSeq:WP_012157899.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355330.1
COORDINATES: protein motif:HMM:NF014844.2
COORDINATES: protein motif:HMM:NF014060.2
COORDINATES: similar to AA sequence:RefSeq:WP_018590160.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514606.1
COORDINATES: similar to AA sequence:RefSeq:WP_016206838.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009267408.1
COORDINATES: protein motif:HMM:NF024231.2
COORDINATES: similar to AA sequence:RefSeq:WP_018085221.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909577.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010966479.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: similar to AA sequence:RefSeq:WP_013119108.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013379514.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004033726.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014356023.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006000676.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_003357998.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001170540.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012283637.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: similar to AA sequence:RefSeq:WP_006441165.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003512867.1
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF015013.2
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:NF025010.2
SurA N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00580.1
COORDINATES: protein motif:HMM:NF014602.2
COORDINATES: similar to AA sequence:RefSeq:WP_003421426.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908000.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160484.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_010073819.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019595543.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0045982 - negative regulation of purine nucleobase metabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007050627.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011971165.1
COORDINATES: similar to AA sequence:RefSeq:WP_008394298.1
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006874786.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525467.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361421.1
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012343623.1
COORDINATES: similar to AA sequence:RefSeq:WP_013237331.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379152.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003515879.1
COORDINATES: similar to AA sequence:RefSeq:WP_007050837.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908547.1
COORDINATES: similar to AA sequence:RefSeq:WP_004606833.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_013382254.1
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_013362379.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003357477.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003544674.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015924326.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011967531.1
COORDINATES: similar to AA sequence:RefSeq:WP_011928425.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357189.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065418.1
KOW domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003421130.1
COORDINATES: similar to AA sequence:RefSeq:WP_009904768.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013382266.1
COORDINATES: similar to AA sequence:RefSeq:WP_013382267.1
COORDINATES: similar to AA sequence:RefSeq:WP_011988821.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514656.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000628816.1
COORDINATES: similar to AA sequence:RefSeq:WP_004459293.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158382.1
COORDINATES: similar to AA sequence:RefSeq:WP_003156488.1
COORDINATES: similar to AA sequence:RefSeq:WP_001080834.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357202.1
COORDINATES: similar to AA sequence:RefSeq:WP_007885948.1
COORDINATES: similar to AA sequence:RefSeq:WP_013382277.1
COORDINATES: similar to AA sequence:RefSeq:WP_013382278.1
COORDINATES: similar to AA sequence:RefSeq:WP_011988810.1
COORDINATES: similar to AA sequence:RefSeq:WP_003385450.1
COORDINATES: similar to AA sequence:RefSeq:WP_013824058.1
COORDINATES: similar to AA sequence:RefSeq:WP_014792388.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065438.1
COORDINATES: similar to AA sequence:RefSeq:WP_001205558.1
COORDINATES: similar to AA sequence:RefSeq:WP_001127258.1
COORDINATES: similar to AA sequence:RefSeq:WP_013382286.1
COORDINATES: similar to AA sequence:RefSeq:NP_387996.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005838150.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355309.1
COORDINATES: similar to AA sequence:RefSeq:WP_001137493.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158364.1
COORDINATES: similar to AA sequence:RefSeq:WP_013382426.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_016728819.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_020814236.1
COORDINATES: similar to AA sequence:RefSeq:WP_019225205.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003515020.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158357.1
COORDINATES: similar to AA sequence:RefSeq:WP_004619832.1
transcription termination/antitermination protein NusG
COORDINATES: protein motif:HMM:TIGR00964.1
COORDINATES: similar to AA sequence:RefSeq:WP_004402360.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: similar to AA sequence:RefSeq:WP_013240709.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_013381651.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013382300.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006598750.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011989326.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014357223.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004624376.1
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:TIGR00154.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: protein motif:HMM:TIGR02785.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO:0000724 - double-strand break repair via homologous recombination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02773.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003482817.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158214.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064630.1
nitric oxide reductase activation-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_014354779.1
COORDINATES: similar to AA sequence:RefSeq:WP_004620656.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004627367.1
COORDINATES: similar to AA sequence:RefSeq:WP_000594016.1
COORDINATES: similar to AA sequence:RefSeq:WP_003513775.1
COORDINATES: similar to AA sequence:RefSeq:WP_003513777.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381734.1
COORDINATES: similar to AA sequence:RefSeq:WP_003744464.1
COORDINATES: similar to AA sequence:RefSeq:WP_015537587.1
COORDINATES: similar to AA sequence:RefSeq:WP_011591391.1
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355203.1
COORDINATES: protein motif:HMM:NF039407.1
COORDINATES: similar to AA sequence:RefSeq:WP_020814819.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB
COORDINATES: similar to AA sequence:RefSeq:WP_004626014.1
COORDINATES: protein motif:HMM:NF002646.0
GO:0008926 - mannitol-1-phosphate 5-dehydrogenase activity [Evidence IEA]
GO:0019594 - mannitol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015392237.1
COORDINATES: similar to AA sequence:RefSeq:WP_000428805.1
COORDINATES: similar to AA sequence:RefSeq:WP_004624697.1
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF021252.2
COORDINATES: protein motif:HMM:NF016983.2
COORDINATES: similar to AA sequence:RefSeq:WP_007062934.1
COORDINATES: similar to AA sequence:RefSeq:WP_006442501.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:NF012257.2
COORDINATES: similar to AA sequence:RefSeq:WP_009325571.1
COORDINATES: similar to AA sequence:RefSeq:WP_008514097.1
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015926716.1
COORDINATES: similar to AA sequence:RefSeq:WP_013378634.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008676225.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009462509.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003420547.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004605621.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909301.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909304.1
COORDINATES: similar to AA sequence:RefSeq:WP_003366864.1
COORDINATES: similar to AA sequence:RefSeq:WP_003219228.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014357851.1
COORDINATES: similar to AA sequence:RefSeq:WP_006572876.1
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: similar to AA sequence:RefSeq:WP_012061243.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_015357740.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909323.1
GO:0032466 - negative regulation of cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_014257141.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_003434237.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_006599279.1
COORDINATES: protein motif:HMM:TIGR03592.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362794.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_003495536.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009255045.1
COORDINATES: similar to AA sequence:RefSeq:WP_012157886.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002599134.1
COORDINATES: protein motif:HMM:NF000823.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014354423.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_013378370.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589794.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: similar to AA sequence:RefSeq:WP_014355759.1
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004398740.1
COORDINATES: similar to AA sequence:RefSeq:WP_019224655.1
COORDINATES: similar to AA sequence:RefSeq:WP_014825236.1
COORDINATES: similar to AA sequence:RefSeq:WP_015527543.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010248269.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013444.2
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_007063045.1
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: similar to AA sequence:RefSeq:WP_014256962.1
COORDINATES: similar to AA sequence:RefSeq:WP_007786544.1
COORDINATES: similar to AA sequence:RefSeq:WP_004619193.1
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011641157.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: similar to AA sequence:RefSeq:WP_014356600.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_008516135.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014183251.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_001209295.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_013378700.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006598540.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00443.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]; GO:0030234 - enzyme regulator activity [Evidence IEA]
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: protein motif:HMM:NF025112.2
COORDINATES: similar to AA sequence:RefSeq:WP_013655453.1
manganese efflux pump MntP family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015390240.1
GO:0043822 - ribonuclease M5 activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355996.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_013239172.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000432163.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012772.2
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_019678508.1
COORDINATES: similar to AA sequence:RefSeq:WP_013485341.1
COORDINATES: protein motif:HMM:NF019350.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006568962.1
COORDINATES: similar to AA sequence:RefSeq:WP_006718520.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014793946.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361008.1
COORDINATES: similar to AA sequence:RefSeq:WP_009066379.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361010.1
COORDINATES: similar to AA sequence:RefSeq:WP_009254305.1
GO:0005388 - P-type calcium transporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
calcium-translocating P-type ATPase, PMCA-type
COORDINATES: similar to AA sequence:RefSeq:WP_013380344.1
COORDINATES: similar to AA sequence:RefSeq:WP_018212803.1
COORDINATES: protein motif:HMM:NF024136.2
COORDINATES: similar to AA sequence:RefSeq:WP_015756273.1
COORDINATES: protein motif:HMM:NF014825.2
COORDINATES: protein motif:HMM:NF015100.2
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_014254616.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014062.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016287739.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF019886.2
COORDINATES: similar to AA sequence:RefSeq:WP_009295859.1
COORDINATES: protein motif:HMM:NF019896.2
D-Ala-D-Ala carboxypeptidase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_018305578.1
COORDINATES: protein motif:HMM:NF019292.2
COORDINATES: similar to AA sequence:RefSeq:WP_018595018.1
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: protein motif:HMM:NF022641.2
COORDINATES: similar to AA sequence:RefSeq:WP_016281544.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005814186.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321728.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355601.1
COORDINATES: similar to AA sequence:RefSeq:WP_015942825.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064558.1
COORDINATES: similar to AA sequence:RefSeq:WP_014185881.1
COORDINATES: protein motif:HMM:NF024734.2
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: protein motif:HMM:NF012401.2
COORDINATES: protein motif:HMM:NF013776.2
COORDINATES: protein motif:HMM:NF018816.2
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: similar to AA sequence:RefSeq:WP_015044606.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002567242.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381227.1
COORDINATES: similar to AA sequence:RefSeq:WP_002567243.1
COORDINATES: similar to AA sequence:RefSeq:WP_007036200.1
COORDINATES: protein motif:HMM:NF018682.2
COORDINATES: protein motif:HMM:NF013296.2
COORDINATES: similar to AA sequence:RefSeq:WP_002567245.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013381222.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381221.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381219.1
COORDINATES: protein motif:HMM:NF039585.1
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009537578.1
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF016526.2
accessory gene regulator B family protein
COORDINATES: protein motif:HMM:NF012301.2
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF025854.2
COORDINATES: similar to AA sequence:RefSeq:WP_011723156.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012283199.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_002843922.1
COORDINATES: similar to AA sequence:RefSeq:WP_017416329.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009169793.1
COORDINATES: similar to AA sequence:RefSeq:WP_015549987.1
COORDINATES: protein motif:HMM:NF014375.2
COORDINATES: similar to AA sequence:RefSeq:WP_010963567.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074810.1
COORDINATES: similar to AA sequence:RefSeq:WP_017212346.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF004079.0
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003512772.1
COORDINATES: similar to AA sequence:RefSeq:WP_011987231.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355693.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016205991.1
COORDINATES: protein motif:HMM:NF014234.2
COORDINATES: similar to AA sequence:RefSeq:WP_014355012.1
COORDINATES: protein motif:HMM:NF019142.2
COORDINATES: protein motif:HMM:NF005304.0
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: similar to AA sequence:RefSeq:WP_014355166.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0019277 - UDP-N-acetylgalactosamine biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002842946.1
COORDINATES: similar to AA sequence:RefSeq:WP_013378510.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013378531.1
COORDINATES: protein motif:HMM:NF013782.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064493.1
COORDINATES: similar to AA sequence:RefSeq:WP_014312018.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017415770.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015926774.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020457848.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012634582.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002846684.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355255.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065567.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04337.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF014899.2
COORDINATES: protein motif:HMM:NF014749.2
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007050687.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_010965940.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018590010.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013726321.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017751127.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007063990.1
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
carbamoyl phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011862003.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255842.1
COORDINATES: similar to AA sequence:RefSeq:WP_011928327.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_014969038.1
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_025434778.1
COORDINATES: protein motif:HMM:TIGR01687.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014750.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160607.1
COORDINATES: similar to AA sequence:RefSeq:WP_016207909.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:NF014228.2
COORDINATES: similar to AA sequence:RefSeq:WP_006566845.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009052268.1
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: similar to AA sequence:RefSeq:WP_010965320.1
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012059957.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_013379739.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007065051.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008517895.1
COORDINATES: similar to AA sequence:RefSeq:WP_003496277.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909788.1
COORDINATES: protein motif:HMM:TIGR01065.1
COORDINATES: protein motif:HMM:NF020450.2
COORDINATES: protein motif:HMM:NF022702.2
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_015924816.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009167575.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354623.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005428677.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908118.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381352.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512405.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003518486.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_003359347.1
COORDINATES: similar to AA sequence:RefSeq:WP_004444743.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003477766.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_016207079.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000786062.1
COORDINATES: similar to AA sequence:RefSeq:WP_011098451.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908889.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_002597356.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007036358.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: protein motif:HMM:NF010177.0
trans-2-enoyl-CoA reductase family protein
COORDINATES: protein motif:HMM:TIGR01448.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012383.2
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009906469.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908827.1
COORDINATES: similar to AA sequence:RefSeq:WP_003360288.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357041.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963835.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007285448.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003416974.1
COORDINATES: similar to AA sequence:RefSeq:WP_013841399.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355670.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381847.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014312743.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]; GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010233589.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161721.1
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: similar to AA sequence:RefSeq:WP_006715180.1
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: similar to AA sequence:RefSeq:WP_005809432.1
COORDINATES: protein motif:HMM:NF022635.2
COORDINATES: protein motif:HMM:NF018613.2
COORDINATES: protein motif:HMM:NF017538.2
COORDINATES: protein motif:HMM:NF016825.2
cyclodeaminase/cyclohydrolase family protein
COORDINATES: protein motif:HMM:NF025067.2
COORDINATES: similar to AA sequence:RefSeq:WP_016441055.1
veratrol--corrinoid protein metyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003428667.1
prolyl-tRNA synthetase associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013655290.1
(deoxy)nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF018991.2
COORDINATES: protein motif:HMM:NF015047.2
COORDINATES: similar to AA sequence:RefSeq:WP_008374444.1
COORDINATES: similar to AA sequence:RefSeq:WP_006354789.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187456.1
COORDINATES: similar to AA sequence:RefSeq:WP_017212976.1
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: similar to AA sequence:RefSeq:WP_014903607.1
COORDINATES: protein motif:HMM:NF014635.2
COORDINATES: similar to AA sequence:RefSeq:WP_018212869.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_013239232.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239231.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239230.1
COORDINATES: similar to AA sequence:RefSeq:WP_019278591.1
COORDINATES: protein motif:HMM:NF022214.2
COORDINATES: protein motif:HMM:NF014693.2
formylmethanofuran dehydrogenase subunit E family protein
COORDINATES: protein motif:HMM:NF014626.2
COORDINATES: similar to AA sequence:RefSeq:WP_008400345.1
COORDINATES: similar to AA sequence:RefSeq:WP_011879309.1
COORDINATES: similar to AA sequence:RefSeq:WP_006520905.1
COORDINATES: similar to AA sequence:RefSeq:WP_002593749.1
COORDINATES: protein motif:HMM:NF020434.2
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063134.1
COORDINATES: similar to AA sequence:RefSeq:WP_015044438.1
COORDINATES: similar to AA sequence:RefSeq:WP_009460874.1
COORDINATES: protein motif:HMM:NF017215.2
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF016032.2
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
glutamate-cysteine ligase family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013119766.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020816758.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359261.1
COORDINATES: similar to AA sequence:RefSeq:WP_003440767.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356977.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010964213.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003378269.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013939.2
COORDINATES: similar to AA sequence:RefSeq:WP_006597718.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160256.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: protein motif:HMM:NF015451.2
COORDINATES: similar to AA sequence:RefSeq:WP_019662583.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013379133.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013379134.1
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: protein motif:HMM:NF017876.2
COORDINATES: similar to AA sequence:RefSeq:WP_009894128.1
This anti-anti-sigma factor, or anti-sigma factor antagonist, belongs to a family that includes characterized members SpoIIAA, RsbV, RsfA, and RsfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007788450.1
COORDINATES: similar to AA sequence:RefSeq:WP_012157895.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
SigB/SigF/SigG family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_014356921.1
COORDINATES: protein motif:HMM:NF014232.2
COORDINATES: protein motif:HMM:NF002194.0
GO:0016301 - kinase activity [Evidence IEA]
GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017417156.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013380579.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362210.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360951.1
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003366249.1
COORDINATES: similar to AA sequence:RefSeq:WP_013485806.1
COORDINATES: similar to AA sequence:RefSeq:WP_007784842.1
COORDINATES: similar to AA sequence:RefSeq:WP_015044781.1
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_010965865.1
COORDINATES: protein motif:HMM:TIGR02181.1
COORDINATES: protein motif:HMM:NF024067.2
COORDINATES: similar to AA sequence:RefSeq:WP_003515586.1
COORDINATES: similar to AA sequence:RefSeq:WP_003542222.1
COORDINATES: similar to AA sequence:RefSeq:WP_003513780.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015485003.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007286528.1
COORDINATES: similar to AA sequence:RefSeq:WP_003376355.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF014600.2
COORDINATES: protein motif:HMM:NF014080.2
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009080634.1
COORDINATES: protein motif:HMM:TIGR00367.1
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: similar to AA sequence:RefSeq:WP_015572901.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF039835.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062363.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625866.1
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_019849730.1
anaerobic nitric oxide reductase flavorubredoxin
COORDINATES: similar to AA sequence:RefSeq:WP_020458004.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003360229.1
COORDINATES: similar to AA sequence:RefSeq:WP_003482990.1
COORDINATES: similar to AA sequence:RefSeq:WP_019850391.1
COORDINATES: similar to AA sequence:RefSeq:WP_007861974.1
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908968.1
COORDINATES: similar to AA sequence:RefSeq:WP_007048998.1
COORDINATES: similar to AA sequence:RefSeq:WP_007048999.1
COORDINATES: similar to AA sequence:RefSeq:WP_015517273.1
COORDINATES: similar to AA sequence:RefSeq:WP_001156491.1
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: similar to AA sequence:RefSeq:WP_010168762.1
COORDINATES: similar to AA sequence:RefSeq:WP_007049402.1
COORDINATES: similar to AA sequence:RefSeq:WP_016148376.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909814.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008909341.1
COORDINATES: similar to AA sequence:RefSeq:WP_013978296.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909344.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379178.1
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: similar to AA sequence:RefSeq:WP_014356580.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014356579.1
COORDINATES: protein motif:HMM:TIGR01947.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
RnfABCDGE type electron transport complex subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_010246511.1
COORDINATES: similar to AA sequence:RefSeq:WP_013380941.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159622.1
RnfABCDGE type electron transport complex subunit B
COORDINATES: protein motif:HMM:NF025572.2
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: similar to AA sequence:RefSeq:WP_010251440.1
COORDINATES: protein motif:HMM:TIGR00219.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:NF016019.2
COORDINATES: similar to AA sequence:RefSeq:WP_008513970.1
COORDINATES: similar to AA sequence:RefSeq:WP_009895862.1
COORDINATES: similar to AA sequence:RefSeq:WP_006598229.1
COORDINATES: similar to AA sequence:RefSeq:WP_014261908.1
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_014355493.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_004455123.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014357157.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF036410.2
COORDINATES: similar to AA sequence:RefSeq:WP_017413492.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_143145383.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019342.2
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013378854.1
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00150.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:TIGR01909.1
COORDINATES: similar to AA sequence:RefSeq:WP_001038005.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003542443.1
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: similar to AA sequence:RefSeq:WP_015360273.1
GO:0008999 - ribosomal protein S5-alanine alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR01906.1
COORDINATES: similar to AA sequence:RefSeq:WP_016440953.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_012160303.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0051775 - response to redox state [Evidence IEA]
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_013625235.1
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015799.2
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: similar to AA sequence:RefSeq:WP_013382562.1
COORDINATES: similar to AA sequence:RefSeq:WP_000917306.1
COORDINATES: similar to AA sequence:RefSeq:WP_001030000.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003499238.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357290.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000743900.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019849289.1
COORDINATES: similar to AA sequence:RefSeq:WP_017211693.1
COORDINATES: similar to AA sequence:RefSeq:WP_014903284.1
COORDINATES: similar to AA sequence:RefSeq:WP_008118306.1
COORDINATES: protein motif:HMM:NF024829.2
COORDINATES: similar to AA sequence:RefSeq:WP_006567341.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584400.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392352.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_012425289.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392353.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013360418.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360417.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392348.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014184745.1
COORDINATES: protein motif:HMM:NF025885.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015262053.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF020123.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063126.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394703.1
COORDINATES: protein motif:HMM:NF021592.2
YhfC family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF013421.2
COORDINATES: similar to AA sequence:RefSeq:WP_006597938.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379272.1
COORDINATES: similar to AA sequence:RefSeq:WP_015360141.1
GO:0006281 - DNA repair [Evidence IEA]; GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013379274.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003515618.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_015261769.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_003515614.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: similar to AA sequence:RefSeq:WP_013379279.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013379280.1
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: similar to AA sequence:RefSeq:WP_015521616.1
COORDINATES: similar to AA sequence:RefSeq:WP_009537024.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013810671.1
type I restriction endonuclease subunit R
COORDINATES: similar to AA sequence:RefSeq:WP_014519065.1
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014901759.1
COORDINATES: similar to AA sequence:RefSeq:WP_009622569.1
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_011099177.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000076663.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461874.1
COORDINATES: similar to AA sequence:RefSeq:WP_004442338.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005816363.1
COORDINATES: similar to AA sequence:RefSeq:WP_003359913.1
GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF009555.0
YgeY family selenium metabolism-linked hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011723192.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013381016.1
trimethylamine methyltransferase family protein
COORDINATES: protein motif:HMM:NF014126.2
COORDINATES: protein motif:HMM:NF024921.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013413.2
COORDINATES: similar to AA sequence:RefSeq:WP_008517970.1
COORDINATES: similar to AA sequence:RefSeq:WP_008517972.1
phosphate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012101301.1
COORDINATES: protein motif:HMM:NF012308.2
COORDINATES: similar to AA sequence:RefSeq:WP_005813035.1
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: similar to AA sequence:RefSeq:WP_014903705.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064823.1
COORDINATES: similar to AA sequence:RefSeq:WP_010965814.1
COORDINATES: similar to AA sequence:RefSeq:WP_009887810.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003425542.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF012424.2
dihydrolipoamide acetyltransferase family protein
COORDINATES: protein motif:HMM:TIGR01350.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013382362.1
COORDINATES: similar to AA sequence:RefSeq:WP_006875613.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_003514134.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012843.2
COORDINATES: similar to AA sequence:RefSeq:WP_012344970.1
COORDINATES: protein motif:HMM:NF016216.2
glycerol-3-phosphate responsive antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_011099558.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024707.2
B12-binding domain-containing radical SAM protein
COORDINATES: protein motif:HMM:NF013625.2
COORDINATES: similar to AA sequence:RefSeq:WP_003483065.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013381347.1
permease-like cell division protein FtsX
COORDINATES: protein motif:HMM:NF023358.2
COORDINATES: protein motif:HMM:TIGR00225.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010074229.1
COORDINATES: similar to AA sequence:RefSeq:WP_014313506.1
COORDINATES: similar to AA sequence:RefSeq:WP_018307000.1
COORDINATES: similar to AA sequence:RefSeq:WP_013823746.1
COORDINATES: protein motif:HMM:NF016364.2
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011721172.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004619808.1
COORDINATES: protein motif:HMM:NF020711.2
COORDINATES: similar to AA sequence:RefSeq:WP_003513911.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01893.1
COORDINATES: similar to AA sequence:RefSeq:WP_009167789.1
COORDINATES: similar to AA sequence:RefSeq:WP_013840341.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617515.1
COORDINATES: similar to AA sequence:RefSeq:WP_008410809.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011100665.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011988886.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF021145.2
MptD family putative ECF transporter S component
COORDINATES: similar to AA sequence:RefSeq:WP_008410299.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356062.1
COORDINATES: similar to AA sequence:RefSeq:WP_001990088.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061257.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065386.1
COORDINATES: protein motif:HMM:NF021443.2
cell wall-active antibiotics response protein
COORDINATES: similar to AA sequence:RefSeq:WP_007050253.1
COORDINATES: similar to AA sequence:RefSeq:WP_008514258.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006356043.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014825148.1
COORDINATES: similar to AA sequence:RefSeq:WP_015945315.1
COORDINATES: similar to AA sequence:RefSeq:WP_015044077.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037658.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: protein motif:HMM:NF022338.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160293.1
COORDINATES: protein motif:HMM:NF028259.2
COORDINATES: protein motif:HMM:NF014566.2
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006715327.1
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514292.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_012634696.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356891.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006598212.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514324.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_003514326.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_013381790.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010168927.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00757.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002843130.1
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_013379990.1
COORDINATES: similar to AA sequence:RefSeq:WP_020816858.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073195.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: similar to AA sequence:RefSeq:WP_005816533.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012159599.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: similar to AA sequence:RefSeq:WP_014256129.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015542611.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355750.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012048348.1
COORDINATES: similar to AA sequence:RefSeq:WP_002846569.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02395.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003375861.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_001036337.1
COORDINATES: similar to AA sequence:RefSeq:WP_009536027.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020073965.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_002843568.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013379001.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356806.1
COORDINATES: protein motif:HMM:NF018644.2
COORDINATES: similar to AA sequence:RefSeq:WP_003355863.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006876248.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_011459275.1
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: similar to AA sequence:RefSeq:WP_010966735.1
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: protein motif:HMM:NF016705.2
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009623828.1
COORDINATES: protein motif:HMM:NF015820.2
class III extradiol ring-cleavage dioxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_003511939.1
COORDINATES: similar to AA sequence:RefSeq:WP_003511940.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018961.2
COORDINATES: protein motif:HMM:NF020037.2
COORDINATES: similar to AA sequence:RefSeq:WP_013174822.1
COORDINATES: similar to AA sequence:RefSeq:WP_018307368.1
COORDINATES: protein motif:HMM:NF005712.0
5-guanidino-2-oxopentanoate decarboxylase
COORDINATES: protein motif:HMM:TIGR01141.1
COORDINATES: similar to AA sequence:RefSeq:WP_011968074.1
COORDINATES: similar to AA sequence:RefSeq:WP_005814594.1
COORDINATES: protein motif:HMM:NF014656.2
COORDINATES: protein motif:HMM:NF013490.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_006440613.1
COORDINATES: protein motif:HMM:NF024081.2
FeoB-associated Cys-rich membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_014185096.1
COORDINATES: similar to AA sequence:RefSeq:WP_005428196.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0006555 - methionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355324.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355323.1
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: similar to AA sequence:RefSeq:WP_014119795.1
branched-chain amino acid transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_006521431.1
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: protein motif:HMM:TIGR00474.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808585.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
Most members of this family contain a selenocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014254006.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015359188.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065151.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014356883.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199287.1
COORDINATES: protein motif:HMM:TIGR00762.1
COORDINATES: protein motif:HMM:NF010697.0
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010681242.1
COORDINATES: similar to AA sequence:RefSeq:WP_013724627.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015359201.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003520176.1
COORDINATES: protein motif:HMM:NF020090.2
COORDINATES: protein motif:HMM:TIGR02210.1
COORDINATES: similar to AA sequence:RefSeq:WP_013380456.1
TIGR03960 family B12-binding radical SAM protein
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_009892542.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021561.2
COORDINATES: similar to AA sequence:RefSeq:WP_011876665.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003512250.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355742.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_007049355.1
GO:0004042 - acetyl-CoA:L-glutamate N-acetyltransferase activity [Evidence IEA]; GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_016291652.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007049353.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR01368.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010077481.1
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013380359.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_007049286.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
vitamin B12-dependent ribonucleotide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014184528.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381172.1
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: similar to AA sequence:RefSeq:WP_012062477.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519104.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006574161.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721840.1
COORDINATES: similar to AA sequence:RefSeq:WP_004849136.1
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: similar to AA sequence:RefSeq:WP_013379264.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035590.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356065.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013121457.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355240.1
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF013663.2
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039187.1
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: protein motif:HMM:NF017485.2
COORDINATES: similar to AA sequence:RefSeq:WP_011009817.1
COORDINATES: similar to AA sequence:RefSeq:WP_015568787.1
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: protein motif:HMM:NF013647.2
COORDINATES: similar to AA sequence:RefSeq:WP_008909212.1
COORDINATES: protein motif:HMM:NF014092.2
COORDINATES: similar to AA sequence:RefSeq:WP_011100465.1
COORDINATES: similar to AA sequence:RefSeq:WP_013380720.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356762.1
COORDINATES: protein motif:HMM:TIGR01856.1
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF015867.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0005215 - transporter activity [Evidence IEA]
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: similar to AA sequence:RefSeq:WP_010075973.1
COORDINATES: protein motif:HMM:NF012998.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061829.1
GO:0018492 - carbon-monoxide dehydrogenase (acceptor) activity [Evidence IEA]
anaerobic carbon-monoxide dehydrogenase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014355464.1
carbon monoxide dehydrogenase accessory protein CooC
COORDINATES: similar to AA sequence:RefSeq:WP_003418359.1
acetyl-CoA decarbonylase/synthase complex subunit alpha/beta
COORDINATES: similar to AA sequence:RefSeq:WP_014355456.1
COORDINATES: similar to AA sequence:RefSeq:WP_003432254.1
acetyl-CoA decarbonylase/synthase complex subunit delta
COORDINATES: similar to AA sequence:RefSeq:WP_007286360.1
acetyl-CoA decarbonylase/synthase complex subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_015525295.1
carbon monoxide dehydrogenase/acetyl-CoA synthase methytransferase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012063172.1
corrinoid activation/regeneration protein AcsV
COORDINATES: similar to AA sequence:RefSeq:WP_012102013.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257070.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013378709.1
COORDINATES: similar to AA sequence:RefSeq:WP_020492288.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR04518.1
folate family ECF transporter S component
COORDINATES: similar to AA sequence:RefSeq:WP_014355320.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003418328.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063162.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_013379293.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: protein motif:HMM:TIGR01499.1
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011098472.1
COORDINATES: similar to AA sequence:RefSeq:WP_007050746.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013379089.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013658388.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160054.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF012795.2
COORDINATES: similar to AA sequence:RefSeq:WP_003375470.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020492887.1
COORDINATES: similar to AA sequence:RefSeq:WP_020492886.1
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: similar to AA sequence:RefSeq:WP_012159093.1
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF008692.0
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010251624.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_002581943.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003368017.1
COORDINATES: similar to AA sequence:RefSeq:WP_007050869.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358263.1
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: similar to AA sequence:RefSeq:WP_004037834.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014356306.1
COORDINATES: similar to AA sequence:RefSeq:WP_011100181.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064133.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073789.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003237058.1
COORDINATES: similar to AA sequence:RefSeq:WP_008519250.1
COORDINATES: similar to AA sequence:RefSeq:WP_013380017.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF017853.2
COORDINATES: protein motif:HMM:NF025589.2
COORDINATES: similar to AA sequence:RefSeq:WP_019678505.1
COORDINATES: similar to AA sequence:RefSeq:WP_013238769.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254090.1
COORDINATES: protein motif:HMM:NF021398.2
COORDINATES: similar to AA sequence:RefSeq:WP_002575719.1
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_006441892.1
COORDINATES: similar to AA sequence:RefSeq:WP_015924209.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355977.1
COORDINATES: protein motif:HMM:TIGR00614.1
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF025729.2
COORDINATES: similar to AA sequence:RefSeq:WP_003514906.1
COORDINATES: protein motif:HMM:NF013982.2
COORDINATES: similar to AA sequence:RefSeq:WP_011099548.1
COORDINATES: similar to AA sequence:RefSeq:WP_009253746.1
COORDINATES: similar to AA sequence:RefSeq:WP_006567074.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102779.1
COORDINATES: similar to AA sequence:RefSeq:WP_007064730.1
COORDINATES: similar to AA sequence:RefSeq:WP_006567332.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356168.1
COORDINATES: similar to AA sequence:RefSeq:WP_009622049.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394831.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239623.1
COORDINATES: similar to AA sequence:RefSeq:WP_009290959.1
COORDINATES: similar to AA sequence:RefSeq:WP_009004773.1
COORDINATES: similar to AA sequence:RefSeq:WP_013380773.1
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: similar to AA sequence:RefSeq:WP_014827729.1
COORDINATES: similar to AA sequence:RefSeq:WP_012059169.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008518709.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014184471.1
GO:0031362 - anchored component of external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033286 - ATPase-coupled ectoine transmembrane transporter activity [Evidence IEA]; GO:0033288 - ATPase-coupled hydroxyectoine transmembrane transporter activity [Evidence IEA]; GO:0033294 - ectoine binding [Evidence IEA]; GO:0033295 - hydroxyectoine binding [Evidence IEA]
GO:0051470 - ectoine transport [Evidence IEA]; GO:0033308 - hydroxyectoine transport [Evidence IEA]
ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB
COORDINATES: similar to AA sequence:RefSeq:WP_005808700.1
GO:0033286 - ATPase-coupled ectoine transmembrane transporter activity [Evidence IEA]; GO:0033288 - ATPase-coupled hydroxyectoine transmembrane transporter activity [Evidence IEA]
ectoine/hydroxyectoine ABC transporter permease subunit EhuC
COORDINATES: similar to AA sequence:RefSeq:WP_014184473.1
ectoine/hydroxyectoine ABC transporter permease subunit EhuD
COORDINATES: similar to AA sequence:RefSeq:WP_003433357.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0033286 - ATPase-coupled ectoine transmembrane transporter activity [Evidence IEA]; GO:0033288 - ATPase-coupled hydroxyectoine transmembrane transporter activity [Evidence IEA]
ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA
COORDINATES: similar to AA sequence:RefSeq:WP_011098550.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158547.1
COORDINATES: similar to AA sequence:RefSeq:WP_013272307.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034864.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_004035690.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010244150.1
COORDINATES: similar to AA sequence:RefSeq:WP_014184997.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461958.1
COORDINATES: similar to AA sequence:RefSeq:WP_006521513.1
COORDINATES: protein motif:HMM:NF023184.2
nitrous oxide-stimulated promoter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014792834.1
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: similar to AA sequence:RefSeq:WP_010239079.1
COORDINATES: similar to AA sequence:RefSeq:WP_009171162.1
COORDINATES: similar to AA sequence:RefSeq:WP_015261936.1
COORDINATES: similar to AA sequence:RefSeq:WP_017752563.1
COORDINATES: similar to AA sequence:RefSeq:WP_006627277.1
COORDINATES: protein motif:HMM:NF025608.2
COORDINATES: similar to AA sequence:RefSeq:WP_013360937.1
COORDINATES: similar to AA sequence:RefSeq:WP_007858074.1
COORDINATES: similar to AA sequence:RefSeq:WP_002844541.1
COORDINATES: similar to AA sequence:RefSeq:WP_008369449.1
COORDINATES: similar to AA sequence:RefSeq:WP_013380363.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011099995.1
COORDINATES: similar to AA sequence:RefSeq:WP_006598245.1
stress-responsive transcriptional regulator PspC
COORDINATES: similar to AA sequence:RefSeq:WP_013380365.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573581.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003370493.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379925.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025635.2
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: protein motif:HMM:TIGR00545.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017751497.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381531.1
GO:0047200 - tetrahydrodipicolinate N-acetyltransferase activity [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015358873.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013381529.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013381528.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013381523.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582562.1
COORDINATES: protein motif:HMM:NF001033.0
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006863813.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514581.1
COORDINATES: similar to AA sequence:RefSeq:WP_008518426.1
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: similar to AA sequence:RefSeq:WP_007060936.1
COORDINATES: similar to AA sequence:RefSeq:WP_015925135.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518160.1
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009860965.1
COORDINATES: similar to AA sequence:RefSeq:WP_004628760.1
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065389.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00921.1
hydrophobe/amphiphile efflux-3 (HAE3) family transporter
COORDINATES: protein motif:HMM:NF019559.2
COORDINATES: similar to AA sequence:RefSeq:WP_013360913.1
GO:0016021 - integral component of membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]