Prevotella nigrescens strain F0109 chromosome 2, complete sequence.
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.
Submitted (21-MAR-2021) Microbiology, The Forsyth Institute, 245 First Street, Cambridge, MA 02142, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP072338.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 22-DEC-2020\nAssembly Method :: Pacbio MA v. 9.0.0.92188\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 546x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/06/2022 20:46:01\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,448\nCDSs (total) :: 2,385\nGenes (coding) :: 2,329\nCDSs (with protein) :: 2,329\nGenes (RNA) :: 63\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 3\nPseudo Genes (total) :: 56\nCDSs (without protein) :: 56\nPseudo Genes (ambiguous residues) :: 0 of 56\nPseudo Genes (frameshifted) :: 25 of 56\nPseudo Genes (incomplete) :: 42 of 56\nPseudo Genes (internal stop) :: 2 of 56\nPseudo Genes (multiple problems) :: 13 of 56\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013265268.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004365008.1
COORDINATES: similar to AA sequence:RefSeq:WP_018572087.1
COORDINATES: similar to AA sequence:RefSeq:WP_004384180.1
type 1 glutamine amidotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004384181.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_004384186.1
COORDINATES: similar to AA sequence:RefSeq:WP_004380969.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823896.1
COORDINATES: similar to AA sequence:RefSeq:WP_008659260.1
COORDINATES: protein motif:HMM:NF024573.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025844.2
COORDINATES: similar to AA sequence:RefSeq:WP_004308773.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911484.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367134.1
PDDEXK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007410943.1
COORDINATES: similar to AA sequence:RefSeq:WP_018909616.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046495.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352487.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004367897.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005845940.1
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: similar to AA sequence:RefSeq:WP_018571912.1
COORDINATES: similar to AA sequence:RefSeq:WP_004346459.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352879.1
COORDINATES: similar to AA sequence:RefSeq:WP_004375824.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004352710.1
COORDINATES: similar to AA sequence:RefSeq:WP_019036726.1
helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004331551.1
COORDINATES: similar to AA sequence:RefSeq:WP_004377617.1
COORDINATES: similar to AA sequence:RefSeq:WP_009013258.1
COORDINATES: similar to AA sequence:RefSeq:WP_004346368.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359023.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362639.1
COORDINATES: similar to AA sequence:RefSeq:WP_004339792.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364872.1
COORDINATES: similar to AA sequence:RefSeq:WP_006948484.1
peptidase domain-containing ABC transporter
COORDINATES: similar to AA sequence:RefSeq:WP_018910186.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910187.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364596.1
COORDINATES: similar to AA sequence:RefSeq:WP_004338736.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004364409.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362612.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004365204.1
COORDINATES: similar to AA sequence:RefSeq:WP_008450577.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708614.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364588.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364592.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364594.1
T9SS type A sorting domain-containing protein
COORDINATES: protein motif:HMM:TIGR04183.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004353640.1
COORDINATES: similar to AA sequence:RefSeq:WP_018029259.1
COORDINATES: similar to AA sequence:RefSeq:WP_006256389.1
COORDINATES: protein motif:HMM:NF013788.2
COORDINATES: similar to AA sequence:RefSeq:WP_006256393.1
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006256392.1
COORDINATES: similar to AA sequence:RefSeq:WP_006256394.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671957.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365249.1
COORDINATES: similar to AA sequence:RefSeq:WP_006256588.1
COORDINATES: similar to AA sequence:RefSeq:WP_004351253.1
COORDINATES: similar to AA sequence:RefSeq:WP_004343298.1
COORDINATES: similar to AA sequence:RefSeq:WP_018968437.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365153.1
COORDINATES: similar to AA sequence:RefSeq:WP_004378854.1
COORDINATES: similar to AA sequence:RefSeq:WP_006256403.1
COORDINATES: similar to AA sequence:RefSeq:WP_004348188.1
GO:0032991 - protein-containing complex [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0032196 - transposition [Evidence IEA]
TraG family conjugative transposon ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_013265848.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434717.1
COORDINATES: similar to AA sequence:RefSeq:WP_018968335.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362584.1
COORDINATES: similar to AA sequence:RefSeq:WP_009236096.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362582.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011638.1
COORDINATES: similar to AA sequence:RefSeq:WP_005847756.1
COORDINATES: similar to AA sequence:RefSeq:WP_004348173.1
COORDINATES: similar to AA sequence:RefSeq:WP_004343790.1
COORDINATES: similar to AA sequence:RefSeq:WP_009227183.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365016.1
COORDINATES: similar to AA sequence:RefSeq:WP_009227185.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011652.1
COORDINATES: similar to AA sequence:RefSeq:WP_004380918.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365227.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364333.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671971.1
COORDINATES: similar to AA sequence:RefSeq:WP_018919953.1
type IV toxin-antitoxin system AbiEi family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_004378811.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004378810.1
protein phosphatase 2C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004335114.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353653.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353655.1
COORDINATES: similar to AA sequence:RefSeq:WP_004292742.1
COORDINATES: similar to AA sequence:RefSeq:WP_004292734.1
COORDINATES: similar to AA sequence:RefSeq:WP_057280848.1
CfxA family broad-spectrum class A beta-lactamase
COORDINATES: similar to AA sequence:RefSeq:WP_008124761.1
COORDINATES: similar to AA sequence:RefSeq:WP_004336023.1
COORDINATES: similar to AA sequence:RefSeq:WP_004338348.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342559.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352581.1
COORDINATES: similar to AA sequence:RefSeq:WP_006948358.1
COORDINATES: similar to AA sequence:RefSeq:WP_008449143.1
COORDINATES: similar to AA sequence:RefSeq:WP_018967473.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265521.1
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014709487.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342791.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352311.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352295.1
COORDINATES: similar to AA sequence:RefSeq:WP_004338371.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352296.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362771.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360070.1
COORDINATES: similar to AA sequence:RefSeq:WP_004374597.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911220.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_004363763.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363765.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363767.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352655.1
transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004359461.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008121806.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006044677.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0008233 - peptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367668.1
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018909922.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363782.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363784.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363785.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367673.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363787.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_018909979.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363789.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354247.1
COORDINATES: similar to AA sequence:RefSeq:WP_006044692.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004363792.1
COORDINATES: similar to AA sequence:RefSeq:WP_004358367.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014708288.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367683.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363796.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363797.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008566079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708506.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367716.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364903.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364755.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359770.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046316.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046314.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364759.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364760.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364761.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046310.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367706.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353483.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367705.1
Rossmann-like and DUF2520 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004367703.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364767.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014708492.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364769.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364770.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365320.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367731.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046258.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708493.1
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004367734.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364415.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364416.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364417.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364418.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364419.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364420.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046244.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004337692.1
COORDINATES: similar to AA sequence:RefSeq:WP_004338291.1
COORDINATES: similar to AA sequence:RefSeq:WP_006044835.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366321.1
COORDINATES: similar to AA sequence:RefSeq:WP_012573149.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004379430.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367741.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_004355218.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363507.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363506.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382771.1
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367749.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011984.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363499.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_004363498.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367753.1
COORDINATES: similar to AA sequence:RefSeq:WP_013672096.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363495.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367756.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363492.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006046289.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363490.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363489.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363488.1
COORDINATES: similar to AA sequence:RefSeq:WP_009227493.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_004363485.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367763.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363481.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004367765.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_004367767.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367770.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367772.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363463.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363460.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363458.1
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008822550.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006045821.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363451.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004353445.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364639.1
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004364641.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007368622.1
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006046368.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364647.1
LolA-like putative outer membrane lipoprotein chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_004367795.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708488.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359600.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004364655.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006046373.1
GO:0050097 - methylaspartate mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708672.1
methylaspartate mutase accessory protein GlmL
COORDINATES: similar to AA sequence:RefSeq:WP_004364139.1
GO:0019670 - anaerobic glutamate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364141.1
GO:0050096 - methylaspartate ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364143.1
acyclic terpene utilization AtuA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004364145.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367803.1
alanine-tRNA synthetase second additional domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006046380.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708679.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018909851.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004359776.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_004364153.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011665.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045733.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_009012539.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364160.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364161.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708511.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354557.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910162.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708514.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367822.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045983.1
COORDINATES: similar to AA sequence:RefSeq:WP_008566266.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004362823.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367824.1
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004362825.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362826.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004367827.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671250.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362829.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367830.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045753.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_004362832.1
COORDINATES: similar to AA sequence:RefSeq:WP_004383606.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367834.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362835.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362836.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045848.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362838.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006045846.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910178.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362841.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362842.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361158.1
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_004361156.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362845.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045976.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708555.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006045973.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367846.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381900.1
COORDINATES: similar to AA sequence:RefSeq:WP_018463568.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367848.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367849.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362854.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045968.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366567.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367853.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354715.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006045960.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367856.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362868.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367858.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708367.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004367860.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360392.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006046455.1
GO:0004040 - amidase activity [Evidence IEA]
glucosaminidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006044358.1
outer membrane beta-barrel family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_006045692.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367583.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364697.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367580.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367579.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364691.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045951.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364688.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354540.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_004364686.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045946.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045945.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708420.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010660.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361955.1
COORDINATES: similar to AA sequence:RefSeq:WP_004355391.1
COORDINATES: similar to AA sequence:RefSeq:WP_008563646.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361950.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367564.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367563.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009434853.1
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004361944.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911086.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367558.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367557.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361940.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004367555.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367554.1
choice-of-anchor J domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004367552.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361934.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361933.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045871.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361931.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367546.1
translocation/assembly module TamB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708475.1
COORDINATES: similar to AA sequence:RefSeq:WP_004358282.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708477.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367545.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367544.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367495.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361881.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361886.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361887.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361888.1
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004361889.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367501.1
COORDINATES: similar to AA sequence:RefSeq:WP_004357669.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367503.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367512.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367513.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045768.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045769.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361908.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361909.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708343.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367523.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004367530.1
D-Ala-D-Ala carboxypeptidase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004367532.1
COORDINATES: similar to AA sequence:RefSeq:WP_007575436.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361920.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361921.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367537.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004361923.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045697.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367494.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004357620.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359174.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911264.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004361875.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367488.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367486.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354214.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823087.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009434800.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004367482.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004361858.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367477.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361852.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361850.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353543.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353537.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006952888.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: similar to AA sequence:RefSeq:WP_004367471.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007133979.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046348.1
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: similar to AA sequence:RefSeq:WP_018909705.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708333.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046344.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367467.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367466.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361831.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046336.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367464.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367463.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911537.1
Na(+)-translocating NADH-quinone reductase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_006045880.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_009434655.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_007367090.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_006045883.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_004381994.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_004361821.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367458.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367457.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361817.1
bifunctional methionine sulfoxide reductase B/A protein
COORDINATES: similar to AA sequence:RefSeq:WP_006045920.1
four helix bundle suffix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004361815.1
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_004361812.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367449.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361809.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361808.1
GO:0016021 - integral component of membrane [Evidence IEA]; GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
monofunctional biosynthetic peptidoglycan transglycosylase
COORDINATES: similar to AA sequence:RefSeq:WP_004367446.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361806.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361805.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708315.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004367442.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004361802.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361797.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004354373.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367439.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367438.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367437.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361791.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708301.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367434.1
COORDINATES: similar to AA sequence:RefSeq:WP_004377326.1
COORDINATES: similar to AA sequence:RefSeq:WP_004377327.1
COORDINATES: similar to AA sequence:RefSeq:WP_009230425.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363970.1
COORDINATES: similar to AA sequence:RefSeq:WP_004377331.1
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004341067.1
COORDINATES: similar to AA sequence:RefSeq:WP_004377333.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046392.1
GO:0043364 - glycyl-radical enzyme activating activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708597.1
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_004361773.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361772.1
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004367429.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361770.1
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004361769.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367426.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362431.1
COORDINATES: similar to AA sequence:RefSeq:WP_018909693.1
COORDINATES: similar to AA sequence:RefSeq:WP_018909692.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362435.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: similar to AA sequence:RefSeq:WP_004367415.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435604.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_004382062.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362443.1
DPP IV N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004382064.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367405.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367404.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367400.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367398.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708680.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046232.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353964.1
nucleoside recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004362452.1
COORDINATES: protein motif:HMM:NF033520.1
COORDINATES: similar to AA sequence:RefSeq:WP_004380979.1
type I restriction-modification system subunit M N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00497.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_004343131.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362457.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364711.1
N-acetylmuramidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013265804.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364716.1
RHS repeat-associated core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009012392.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365818.1
COORDINATES: similar to AA sequence:RefSeq:WP_009012391.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265689.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004364709.1
COORDINATES: similar to AA sequence:RefSeq:WP_007135628.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366857.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366856.1
COORDINATES: similar to AA sequence:RefSeq:WP_013670420.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366867.1
COORDINATES: similar to AA sequence:RefSeq:WP_019969154.1
COORDINATES: similar to AA sequence:RefSeq:WP_007134481.1
COORDINATES: protein motif:HMM:TIGR02594.1
COORDINATES: similar to AA sequence:RefSeq:WP_004355431.1