Prevotella nigrescens strain F0109 plasmid unnamed, complete sequence.
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.
Submitted (21-MAR-2021) Microbiology, The Forsyth Institute, 245 First Street, Cambridge, MA 02142, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP072337.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 22-DEC-2020\nAssembly Method :: Pacbio MA v. 9.0.0.92188\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 546x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/06/2022 20:46:01\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,448\nCDSs (total) :: 2,385\nGenes (coding) :: 2,329\nCDSs (with protein) :: 2,329\nGenes (RNA) :: 63\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 3\nPseudo Genes (total) :: 56\nCDSs (without protein) :: 56\nPseudo Genes (ambiguous residues) :: 0 of 56\nPseudo Genes (frameshifted) :: 25 of 56\nPseudo Genes (incomplete) :: 42 of 56\nPseudo Genes (internal stop) :: 2 of 56\nPseudo Genes (multiple problems) :: 13 of 56\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_001161483.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008782591.1
COORDINATES: similar to AA sequence:RefSeq:WP_017645822.1