Mesorhizobium huakuii strain 583 plasmid p_1, complete sequence.
type: Entry
definition: Mesorhizobium huakuii strain 583 plasmid p_1, complete sequence.
sequence version: NZ_CP050299.1
sequence date: 2023-04-27
sequence: sequence
division: CON
label: NZ_CP050299.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN14403981
keyword: RefSeq
source: Mesorhizobium huakuii
organism: Mesorhizobium huakuii
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
reference: 1
references: 32686981
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP050299.1.\nBacteria and source DNA available from Russian Collection of\nAgricultural Microorganisms RCAM04790.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: NOV-2019\nAssembly Method :: Flye v. 2.6\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 44.0x\nSequencing Technology :: Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/27/2023 05:12:45\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 8,326\nCDSs (total) :: 8,264\nGenes (coding) :: 7,502\nCDSs (with protein) :: 7,502\nGenes (RNA) :: 62\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 762\nCDSs (without protein) :: 762\nPseudo Genes (ambiguous residues) :: 0 of 762\nPseudo Genes (frameshifted) :: 553 of 762\nPseudo Genes (incomplete) :: 295 of 762\nPseudo Genes (internal stop) :: 31 of 762\nPseudo Genes (multiple problems) :: 109 of 762\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 686467
topology: circular
so has quality: SO_0000988
location: 1..686467
location: region:1-686467:1
RO_0002162: 28104

NZ_CP050299
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN14403981
type: BioSample
SIO_000068: biosample

1
title: Rhizobial Microsymbionts of Kamchatka Oxytropis Species Possess Genes of the Type III and VI Secretion Systems, Which Can Affect the Development of Symbiosis
author: Safronova, V.I.
author: Guro, P.V.
author: Sazanova, A.L.
author: Kuznetsova, I.G.
author: Belimov, A.A.
author: Yakubov, V.V.
author: Chirak, E.R.
author: Afonin Acapital, E.M. Cyrillic
author: Gogolev, Y.V.
author: Andronov, E.E.
author: Tikhonovich, I.A.
journal: Mol Plant Microbe Interact
volume: 33
issue: 10
pages: 1232-1241
year: 2020
pubmed: 32686981

32686981
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Guro, P.
author: Kuznetsova, I.
author: Sazanova, A.
author: Afonin, A.
author: Chirak, E.
author: Safronova, V.
journal: Submitted (20-MAR-2020) Laboratory of Microbiological Monitoring and Bioremediation of Soils, ARRIAM, Podbelskogo sh., 3, St. Petersburg, Pushkin 196608, Russian Federation

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686467:1
position: 686467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-686467:1:source
so part of: sequence
organism: Mesorhizobium huakuii
mol type: genomic DNA
strain: 583
isolation source: root nodule
host: Oxytropis kamtschatica
culture collection: RCAM:1115
plasmid: p_1
country: Russia: Kamchatka
collection date: 2018

28104
type: Taxonomy
SIO_000068: taxonomy

HB778_RS37835
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37835
old locus tag: HB778_37970
so part of: sequence
location: complement(join(683828..686467,1..624))
location: region:1-686467:-1
so has part: feature:1-624:-1:exon
so has part: feature:683828-686467:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686467:-1
position: 686467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-624:-1:exon

position:624:-1
position: 624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683828-686467:-1:exon

position:683828:-1
position: 683828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HB778_RS37835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37835
old locus tag: HB778_37970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MRIGGVLELGGAEHTFTRTKQRTNPLLNANGQPVSEMAISAHLAGLSRDAYETMFSLDDETLEAGGKSILESRGDLGKLLFTASAGLGHASDTLSVLEAEADKLYRKQAHGTELALLKKRLAELKSGKEAIDTLASTFETLETERLDATEKYDRSIAERSVLSARLDTIAKYLRAIPILADIRRKEAQLAELPEIASPLRTWTGSIADMIETDASLRTRLSASGDELERVTTKIASVDVDAVILAISERVRGLADRKVRHVSAGLDLPSRRTELQILDNAVATCLAALGRSSELHPAKLLLPAATIGAVRTMVEQRSGIVTSLRVAREEAAAAADALQAARERVGEERAVPEPARARLVSALSTAKASGYMRETKAAREAADAGAIRWEAAIARLHPWSGDAQALARIAIPNAGRLGAWKALAAELGMSRGVLSERLAEHQGHHDLLSARLEALRASVDVTDDDAADAIRRARDDAWARHRDDLTGDTADDFAAALARDDSVAAGRLANARELVEIRSTNRNLAETAATIAHTRDQLERNSSDREAVPSEVLAVARDLLGEIPETSPEQLIELIEDRIAARIDALAAWEEIELSRKKTERAVDEEGRIRLELSGARASVGVGSDPGDSLETAMAVAELFLERQFKVDAERTEALKTVGTRQEDLAARRRAIEVAERREDEWLAGVAEALKGTWLESGISATGVGGVLDQLAELSKCLQDRDAMRLRIEKMEADRDNFLVEVTAVAAEAGEAANDDEPEQLAVRLAERLERAERMREAKAGLVNDLQRLQDGRETLDAEISVHERRRNEVLSVFGVATLSEVVQRDELLRDRDRLRTAVAGLEEQLSSELAVEGFEQARSILDAVDLDSLAIEKAEAEQRLRASDEAIQHQLIRQTRATDKLDAIGGDSAVARIDAERRTVLLEIEEKAVRYIELKLGIMSAGNALRLYRERHRSGMMERASDAFALMTRGQYSGLTTQPVKGGEVLIALQRDGQSKVADALSKGARFQLYLALRLAGYYEFAQFRPSVPFIADDIMETFDHVRSEEVFRLFGEMASAGQVVYLTHHQHLCEIAKAVVPSVAIHELGE
SIO_010081: HB778_RS37835
subclass of: SO_0000673
so part of: HB778_RS37835
location: complement(join(683828..686467,1..624))
location: region:1-686467:-1
so has part: feature:1-624:-1:exon
so has part: feature:683828-686467:-1:exon

WP_244662170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:683828-686467:-1:exon

HB778_RS37840
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37840
old locus tag: HB778_37975
pseudo: true
so part of: sequence
location: complement(831..2091)
location: region:831-2091:-1
so has part: feature:831-2091:-1:exon
subclass of: SO_0000010

position:831:-1
position: 831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091:-1
position: 2091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831-2091:-1:exon

HB778_RS37840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37840
old locus tag: HB778_37975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878491.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA repair exonuclease
SIO_010081: HB778_RS37840
subclass of: SO_0000673
so part of: HB778_RS37840
location: complement(831..2091)
location: region:831-2091:-1
so has part: feature:831-2091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:831-2091:-1:exon

HB778_RS42340
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42340
so part of: sequence
location: 2284..2502
location: region:2284-2502:1
so has part: feature:2284-2502:1:exon
subclass of: SO_0000010

position:2284:1
position: 2284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2502:1
position: 2502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2284-2502:1:exon

HB778_RS42340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLVRQERLDTVGDHSKQRVEALNIMRLARCQDEAERSAFSVAPRMEFGGEAAARSAKRLSFLSPLFMPTAQ
SIO_010081: HB778_RS42340
subclass of: SO_0000673
so part of: HB778_RS42340
location: 2284..2502
location: region:2284-2502:1
so has part: feature:2284-2502:1:exon

WP_244662171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2284-2502:1:exon

HB778_RS37850
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37850
old locus tag: HB778_37985
pseudo: true
so part of: sequence
location: 3690..4836
location: region:3690-4836:1
so has part: feature:3690-4836:1:exon
subclass of: SO_0000010

position:3690:1
position: 3690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4836:1
position: 4836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3690-4836:1:exon

HB778_RS37850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37850
old locus tag: HB778_37985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017273361.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1595 family transposase
SIO_010081: HB778_RS37850
subclass of: SO_0000673
so part of: HB778_RS37850
location: 3690..4836
location: region:3690-4836:1
so has part: feature:3690-4836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3690-4836:1:exon

HB778_RS37855
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37855
old locus tag: HB778_37990
pseudo: true
so part of: sequence
location: complement(5128..>5565)
location: region:5128-5565:-1
so has part: feature:5128-5565:-1:exon
subclass of: SO_0000010

position:5128:-1
position: 5128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5565:-1
position: 5565
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5128-5565:-1:exon

HB778_RS37855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37855
old locus tag: HB778_37990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009827048.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS37855
subclass of: SO_0000673
so part of: HB778_RS37855
location: complement(5128..>5565)
location: region:5128-5565:-1
so has part: feature:5128-5565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5128-5565:-1:exon

HB778_RS37860
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37860
old locus tag: HB778_37995
pseudo: true
so part of: sequence
location: complement(5671..>5967)
location: region:5671-5967:-1
so has part: feature:5671-5967:-1:exon
subclass of: SO_0000010

position:5671:-1
position: 5671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5967:-1
position: 5967
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5671-5967:-1:exon

HB778_RS37860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37860
old locus tag: HB778_37995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011239024.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS37860
subclass of: SO_0000673
so part of: HB778_RS37860
location: complement(5671..>5967)
location: region:5671-5967:-1
so has part: feature:5671-5967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5671-5967:-1:exon

HB778_RS37865
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37865
old locus tag: HB778_38000
pseudo: true
so part of: sequence
location: <6138..6825
location: region:6138-6825:1
so has part: feature:6138-6825:1:exon
subclass of: SO_0000010

position:6138:1
position: 6138
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6825:1
position: 6825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6138-6825:1:exon

HB778_RS37865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37865
old locus tag: HB778_38000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016557648.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: family 20 glycosylhydrolase
SIO_010081: HB778_RS37865
subclass of: SO_0000673
so part of: HB778_RS37865
location: <6138..6825
location: region:6138-6825:1
so has part: feature:6138-6825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6138-6825:1:exon

HB778_RS37870
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37870
old locus tag: HB778_38005
pseudo: true
so part of: sequence
location: complement(6830..8034)
location: region:6830-8034:-1
so has part: feature:6830-8034:-1:exon
subclass of: SO_0000010

position:6830:-1
position: 6830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8034:-1
position: 8034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6830-8034:-1:exon

HB778_RS37870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37870
old locus tag: HB778_38005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007537785.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ROK family protein
SIO_010081: HB778_RS37870
subclass of: SO_0000673
so part of: HB778_RS37870
location: complement(6830..8034)
location: region:6830-8034:-1
so has part: feature:6830-8034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6830-8034:-1:exon

HB778_RS37875
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37875
old locus tag: HB778_38010
pseudo: true
so part of: sequence
location: 8235..9257
location: region:8235-9257:1
so has part: feature:8235-9257:1:exon
subclass of: SO_0000010

position:8235:1
position: 8235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9257:1
position: 9257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8235-9257:1:exon

HB778_RS37875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37875
old locus tag: HB778_38010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004115387.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LLM class flavin-dependent oxidoreductase
SIO_010081: HB778_RS37875
subclass of: SO_0000673
so part of: HB778_RS37875
location: 8235..9257
location: region:8235-9257:1
so has part: feature:8235-9257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8235-9257:1:exon

HB778_RS37880
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37880
old locus tag: HB778_38015
pseudo: true
so part of: sequence
location: 9298..>9892
location: region:9298-9892:1
so has part: feature:9298-9892:1:exon
subclass of: SO_0000010

position:9298:1
position: 9298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9892:1
position: 9892
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9298-9892:1:exon

HB778_RS37880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37880
old locus tag: HB778_38015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013894187.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ThuA domain-containing protein
SIO_010081: HB778_RS37880
subclass of: SO_0000673
so part of: HB778_RS37880
location: 9298..>9892
location: region:9298-9892:1
so has part: feature:9298-9892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9298-9892:1:exon

HB778_RS37885
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37885
old locus tag: HB778_38020
pseudo: true
so part of: sequence
location: complement(<10030..>10195)
location: region:10030-10195:-1
so has part: feature:10030-10195:-1:exon
subclass of: SO_0000010

position:10030:-1
position: 10030
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:10195:-1
position: 10195
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10030-10195:-1:exon

HB778_RS37885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37885
old locus tag: HB778_38020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011084703.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS37885
subclass of: SO_0000673
so part of: HB778_RS37885
location: complement(<10030..>10195)
location: region:10030-10195:-1
so has part: feature:10030-10195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10030-10195:-1:exon

HB778_RS37890
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37890
old locus tag: HB778_38025
pseudo: true
so part of: sequence
location: 10270..>10344
location: region:10270-10344:1
so has part: feature:10270-10344:1:exon
subclass of: SO_0000010

position:10270:1
position: 10270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10344:1
position: 10344
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10270-10344:1:exon

HB778_RS37890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37890
old locus tag: HB778_38025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010916038.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS37890
subclass of: SO_0000673
so part of: HB778_RS37890
location: 10270..>10344
location: region:10270-10344:1
so has part: feature:10270-10344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10270-10344:1:exon

HB778_RS37895
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37895
old locus tag: HB778_38030
so part of: sequence
location: complement(10642..11805)
location: region:10642-11805:-1
so has part: feature:10642-11805:-1:exon
subclass of: SO_0000010

position:10642:-1
position: 10642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11805:-1
position: 11805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10642-11805:-1:exon

HB778_RS37895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37895
old locus tag: HB778_38030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533428.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MPVAAHQPKAPTAIRTDLGAIFVSLELSRSKWLITSLSPGGGEKMSKHAVAAGDVAGMLARFAELNRMAQARTGRHFPIIAIQEAGLDGFWIHRVLQAEGIESHVVDAASIATSRRRRRAKTDKIDGEALVRALLAYKRGEPRVCAMLRVPTPEEEDRRRISRERKALTNERVRHVNLVKGLLFAQGVSGYEPLRRDRRKRLEALKTGDDRPLPAHLQAQVGRELARLELLLEQIKAVETERDAMLAATQVVSPAPAMLLHLKGIGPEFAAVLWSEGLSRHFDNRRQVAAYAGVAATPWQSGSVDHDQGVSKAGNPRLRTTLIQTAWLWLRHQPRSALTLWFQDRVKHNGGRLKKATIVALARKLLVALWKYVSAGVVIEGAVMKTA
SIO_010081: HB778_RS37895
subclass of: SO_0000673
so part of: HB778_RS37895
location: complement(10642..11805)
location: region:10642-11805:-1
so has part: feature:10642-11805:-1:exon

WP_183465725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10642-11805:-1:exon

HB778_RS37900
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37900
old locus tag: HB778_38035
so part of: sequence
location: complement(12373..13734)
location: region:12373-13734:-1
so has part: feature:12373-13734:-1:exon
subclass of: SO_0000010

position:12373:-1
position: 12373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13734:-1
position: 13734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12373-13734:-1:exon

HB778_RS37900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37900
old locus tag: HB778_38035
inference: COORDINATES: protein motif:HMM:NF014385.2
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MKLIRLIVPGCLVLLAGCSLSSTYLRPELPAGPHWSTAAVGSAVQASTDRWWLAFGNANLDKLVGEVIGRNNDVLIAAANAYPARLQANTAAQALLPQVNGQVGGSDTSISVSYEIDLWGKLAAKRDKADFEAYATAEDYENARLLASAGTVEAYFNIAYANQSLASAETSLAHAKQTLALVRAQLAAGAVSDLDLSRAEQQVEERALTVSKGKQYRLVQRNALVVLLNGAPNPVPEPQRLPSKKLPPIQTGLPADLLARRPDLRAAEARLRAMLKNVDATQASFYPAISLTGSLGTASGQLLAFISNPVATLGANAALSLLNFKDITLQVAVSRAQYEKEVLGFRTTLLTAFSEVANTLGAQADYAEQVRRRRHVLGAAQETEKLLEARYRSGAINRIDWLNAQESRCAAEMALAHARHDQLLNESKLYRSLGGSAGSAGPDRRRSNREQRP
SIO_010081: HB778_RS37900
subclass of: SO_0000673
so part of: HB778_RS37900
location: complement(12373..13734)
location: region:12373-13734:-1
so has part: feature:12373-13734:-1:exon

WP_183455067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12373-13734:-1:exon

HB778_RS42345
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42345
old locus tag: HB778_38040
so part of: sequence
location: complement(14054..16000)
location: region:14054-16000:-1
so has part: feature:14054-16000:-1:exon
subclass of: SO_0000010

position:14054:-1
position: 14054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16000:-1
position: 16000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14054-16000:-1:exon

HB778_RS42345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42345
old locus tag: HB778_38040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019565819.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MacB family efflux pump subunit
translation: MNALLEIENVSRVFHAGDETIMALAGVSLSIAGGELVAIVGASGSGKTTLMNILGCLDQPSSGDYRVGGRSVAGLTADNLAALRREHFGFIFQHYQLLGTLSAADNVAMPAVYAGLDAGSRRERSTSLLRRLGLGDRLDHRPNQLSGGQQQRVSIARALMNGGRIILADEPTGALDRKSGETVLDTLKALHADGHTIIIVTHDMEIASHADRIIEIREGVILSDRRTRDRKTDGPPALHDSRPVGSLSAFRRRLVEAFPMAIRSMATDRVRTFLTMLSIIIGIAAVVTAFGFGEGARQELLRQLGGFGASTLEISPGRHFGDKGASSIKALVVSDADALADQSYVDSVTPEVRTSAQIRFGHTSVAATVTGVGQDYLKVNALKLLKGSFFSAEAITERSQEAVINDRMAATLFPNDESPLGNILLIGRVPVVIIGVFAPPPALRFDSSPKILLPYTAVKGRLEGAGPSLHALTVRVADSVDTTVAERAVVGLMTRRHGTKDFTVFNQDQWRKSVEHTSQTMWQLTSSLAAISLVVGGIGVMNMMLITVTERTREIGLRMAVGARRIDIMLQFLIEAVTMCIAGSILGVALALGIATVLGEPGSEFPIIISVKAIVAACAVALWMGLTFGFLPARNASRLNPVDALSRD
SIO_010081: HB778_RS42345
subclass of: SO_0000673
so part of: HB778_RS42345
location: complement(14054..16000)
location: region:14054-16000:-1
so has part: feature:14054-16000:-1:exon

WP_244662194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14054-16000:-1:exon

HB778_RS42350
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42350
old locus tag: HB778_38045
pseudo: true
so part of: sequence
location: complement(<16100..17158)
location: region:16100-17158:-1
so has part: feature:16100-17158:-1:exon
subclass of: SO_0000010

position:16100:-1
position: 16100
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:17158:-1
position: 17158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16100-17158:-1:exon

HB778_RS42350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42350
old locus tag: HB778_38045
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
SIO_010081: HB778_RS42350
subclass of: SO_0000673
so part of: HB778_RS42350
location: complement(<16100..17158)
location: region:16100-17158:-1
so has part: feature:16100-17158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16100-17158:-1:exon

HB778_RS37910
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37910
old locus tag: HB778_38050
so part of: sequence
location: complement(17741..18247)
location: region:17741-18247:-1
so has part: feature:17741-18247:-1:exon
subclass of: SO_0000010

position:17741:-1
position: 17741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18247:-1
position: 18247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17741-18247:-1:exon

HB778_RS37910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37910
old locus tag: HB778_38050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: PepSY domain-containing protein
translation: MNDILISALFINVTTVGSALAGGKSDLGIAEWQPRQAVLIKLEADRRQLRSIKTDDGWSDAVESKGLEVETHFDLKTWPVWVVPAKELRINRCATTRVEPLSTVASRQALWRYPSSTKYDRHEPDGHAAAALIMEMSPYSFARDAKDALSYPECMIFKREARYLGQNP
SIO_010081: HB778_RS37910
subclass of: SO_0000673
so part of: HB778_RS37910
location: complement(17741..18247)
location: region:17741-18247:-1
so has part: feature:17741-18247:-1:exon

WP_183455449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17741-18247:-1:exon

HB778_RS37915
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37915
old locus tag: HB778_38055
so part of: sequence
location: 18410..19066
location: region:18410-19066:1
so has part: feature:18410-19066:1:exon
subclass of: SO_0000010

position:18410:1
position: 18410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19066:1
position: 19066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18410-19066:1:exon

HB778_RS37915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37915
old locus tag: HB778_38055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018927959.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MRILLIEDDEDLGSAVREHTMADGHAVDWAKDLSEARDKASLVSYELVLLDIHLPDGNGIDYVREMRKRLDSTPVIIVTARDQVSDKIEGLNAGADDYLVKTFDLGELSARIHAVGRRHGKLPEPYCVGTLSINSAERRCERDGRAVYLTAREWTVFDCLLRRPATVVSKAKIEDVLFSLGSEIESNTVEVYVSRLRKKIGGDRIATVRCFGYRFMVT
SIO_010081: HB778_RS37915
subclass of: SO_0000673
so part of: HB778_RS37915
location: 18410..19066
location: region:18410-19066:1
so has part: feature:18410-19066:1:exon

WP_183455462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18410-19066:1:exon

HB778_RS37920
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37920
old locus tag: HB778_38060
so part of: sequence
location: 19063..20217
location: region:19063-20217:1
so has part: feature:19063-20217:1:exon
subclass of: SO_0000010

position:19063:1
position: 19063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20217:1
position: 20217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19063-20217:1:exon

HB778_RS37920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37920
old locus tag: HB778_38060
inference: COORDINATES: protein motif:HMM:NF012722.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MKKPHSMTRRLILRLGGATLLVWIFVPTIAALMVKDVIYEICDDYLEQTAEVAASAYVDVAKKKFEVSEPPSFDDWIIQFQVRTRDGKVLLDLIENPPKPFPSAPLREGFSTTATDRIYTKKIALDLFAQAAQPLSVRRHEVNKAAVKVFVPMIVFLPFSVAVCWMVIRRSLAPIEVLKQEIGLRDGGNLTLMGSSGLPAELAPIAASVDRLVERLRAALDAEREFAANCAHELRTPIAGSLAQLQRLVAEIPLGSARTRARGIEKSLSRLGHLTEKLLQLARAESGIGIADHAIDLVRVVRLEIDDFEKKPRFAGRLILDVDGCPTLMRKVDVDAFAIILRNLIENALTHGVPDTTITVSVGTDGTIAIANSGPVVPPKILKR
SIO_010081: HB778_RS37920
subclass of: SO_0000673
so part of: HB778_RS37920
location: 19063..20217
location: region:19063-20217:1
so has part: feature:19063-20217:1:exon

WP_183465727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19063-20217:1:exon

HB778_RS37925
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37925
old locus tag: HB778_38065
pseudo: true
so part of: sequence
location: complement(20802..21880)
location: region:20802-21880:-1
so has part: feature:20802-21880:-1:exon
subclass of: SO_0000010

position:20802:-1
position: 20802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21880:-1
position: 21880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20802-21880:-1:exon

HB778_RS37925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37925
old locus tag: HB778_38065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_043766426.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: HB778_RS37925
subclass of: SO_0000673
so part of: HB778_RS37925
location: complement(20802..21880)
location: region:20802-21880:-1
so has part: feature:20802-21880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20802-21880:-1:exon

HB778_RS37930
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37930
old locus tag: HB778_38070
pseudo: true
so part of: sequence
location: complement(21928..>22126)
location: region:21928-22126:-1
so has part: feature:21928-22126:-1:exon
subclass of: SO_0000010

position:21928:-1
position: 21928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22126:-1
position: 22126
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21928-22126:-1:exon

HB778_RS37930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37930
old locus tag: HB778_38070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004126142.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase domain-containing protein
SIO_010081: HB778_RS37930
subclass of: SO_0000673
so part of: HB778_RS37930
location: complement(21928..>22126)
location: region:21928-22126:-1
so has part: feature:21928-22126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21928-22126:-1:exon

HB778_RS37935
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37935
old locus tag: HB778_38075
so part of: sequence
location: 22442..22624
location: region:22442-22624:1
so has part: feature:22442-22624:1:exon
subclass of: SO_0000010

position:22442:1
position: 22442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22624:1
position: 22624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22442-22624:1:exon

HB778_RS37935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37935
old locus tag: HB778_38075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838189.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTLPPPSRLPALRQLIMPLDSRALDGLTRAQRAVAVASLAKLLMAAAGVAEKEMTDDGR
SIO_010081: HB778_RS37935
subclass of: SO_0000673
so part of: HB778_RS37935
location: 22442..22624
location: region:22442-22624:1
so has part: feature:22442-22624:1:exon

WP_183455447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22442-22624:1:exon

HB778_RS37940
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37940
old locus tag: HB778_38080
pseudo: true
so part of: sequence
location: 22611..>22985
location: region:22611-22985:1
so has part: feature:22611-22985:1:exon
subclass of: SO_0000010

position:22611:1
position: 22611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22985:1
position: 22985
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22611-22985:1:exon

HB778_RS37940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37940
old locus tag: HB778_38080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675975.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: HB778_RS37940
subclass of: SO_0000673
so part of: HB778_RS37940
location: 22611..>22985
location: region:22611-22985:1
so has part: feature:22611-22985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22611-22985:1:exon

HB778_RS37945
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37945
old locus tag: HB778_38085
so part of: sequence
location: 24069..24320
location: region:24069-24320:1
so has part: feature:24069-24320:1:exon
subclass of: SO_0000010

position:24069:1
position: 24069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24320:1
position: 24320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24069-24320:1:exon

HB778_RS37945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37945
old locus tag: HB778_38085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYTLPQTIGIDISKATLDAHAYPAGSNQQFANTASGHKALIAWLGQWSVERVAYEATGAYHRELEQALADLPCVKPDLNSWR
SIO_010081: HB778_RS37945
subclass of: SO_0000673
so part of: HB778_RS37945
location: 24069..24320
location: region:24069-24320:1
so has part: feature:24069-24320:1:exon

WP_183455446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24069-24320:1:exon

HB778_RS37950
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37950
old locus tag: HB778_38090
so part of: sequence
location: complement(24364..25770)
location: region:24364-25770:-1
so has part: feature:24364-25770:-1:exon
subclass of: SO_0000010

position:24364:-1
position: 24364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25770:-1
position: 25770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24364-25770:-1:exon

HB778_RS37950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37950
old locus tag: HB778_38090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015932577.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MEKATQPTSGKGKRRRRGAKRDGGRVSREVTVAVSAPAGSRFKGYETILVRDLALSAEVVRYRRERWVTPTGETMVAPLPAGIIGGWGANLRRFILACHIQGQVTTERLTALLTGIGVDISKRQVVRLISEGLEAFAAEDRDVLRAGLATAPWITVDDTSARHAHQDGYTTQIGDRRFTAFRTGRSKSREAFLATLRAGHSDYFINEEALAYMRGRNLAGPVIARLAAAPHKAFADSAAWQAHLAALGLDQLAVEPNPVRIATEGAMWGAIRHHGFLGDTVVVSDDAGQFRIGDHALCWVHAERLVHKLIPVTPDQRQAVDIMRQLIWWFYRDLKSYQRAPCPRHAAALRARFERLFKRRTGYVMLDRLLARLHRRKHELLRVLDRPEIPLHTNGSENDIRTFVTKRKISGGTVSEAGKNARDVLLGLMKTCIKLDVSFFRYLGDRLGIPTQESIPPLPDLVRQAAQA
SIO_010081: HB778_RS37950
subclass of: SO_0000673
so part of: HB778_RS37950
location: complement(24364..25770)
location: region:24364-25770:-1
so has part: feature:24364-25770:-1:exon

WP_210308079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24364-25770:-1:exon

HB778_RS37955
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37955
old locus tag: HB778_38095
so part of: sequence
location: 26979..28064
location: region:26979-28064:1
so has part: feature:26979-28064:1:exon
subclass of: SO_0000010

position:26979:1
position: 26979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28064:1
position: 28064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26979-28064:1:exon

HB778_RS37955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37955
old locus tag: HB778_38095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019856452.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family efflux transporter periplasmic adaptor subunit
translation: MVIYKVVVLSVVAALVSLPLITISVSVQSAGIIRPTVEKTPLVAPVSGRISRILAVENDLVAERQEVLALDDEVVEEKLRALTGDIRVKSDLARDLETLISSGTQAKDPIHLLTESATAERAHFLNLLRENRYARRNAAEELDRTKRLFSAAAAPETAVEERAFALQTIEVQGDILARRKSAEWNQQLLDVKLRLSELTATLHELENERDLTRIRAPVSGSLEQFSGLTPGSYVQAGQTVAWVSPDAELVAEIYVSPSDIGFVRPGQSVRLQVDAFNYNQWGVIDATVLDVAQDFTLHDRSPVFKVRCALLRSRLALENGVIGHLKKGMTVTARFLLGERTLLQLLYNEADGWLNPLLAGH
SIO_010081: HB778_RS37955
subclass of: SO_0000673
so part of: HB778_RS37955
location: 26979..28064
location: region:26979-28064:1
so has part: feature:26979-28064:1:exon

WP_183465728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26979-28064:1:exon

HB778_RS37960
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37960
old locus tag: HB778_38100
so part of: sequence
location: 28094..30235
location: region:28094-30235:1
so has part: feature:28094-30235:1:exon
subclass of: SO_0000010

position:28094:1
position: 28094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30235:1
position: 30235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28094-30235:1:exon

HB778_RS37960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37960
old locus tag: HB778_38100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004676279.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidase domain-containing ABC transporter
translation: MSSKIINFKQRDITDCGAASLASVAAFYGHKLPLSRIRQYASTDRSGTTVLGLMEAARKLGFIAKGVKGGFDSLYKIPKPAIAHVIVKDVLHHFVVIQAVDARWVTVMDPAYGEVRKLSHEEFKTQWTGVLVLLVPADAFKPRDETTSPLARFARLLAPHRAVMAQALVGALVTTILGLSTAIYVQKIVDHVITAGNRNLLNLMSVAMLLILVVQVLINLLRNRLVLQTGQKIDVQLILGYYNHILSLPQNFFDSMRLGEIISRMNDAVKIRNFLNDVSINMFVDALMILSSLGMMFIYSWKIALVVAVSIPLYLSVYWIINRLNRKRQRAIMENAADLEAQLVESLGTVSTIKTSGLESFASLKVEARFIKMLHSVYSSGLISIFGDSASTFLAALFTIVLMWFGTSLTLDQSITPGELLSCYTLLGYVTRPVDSLIQTNRIVQDALIAADRLFDIFDLEPASGGGIDATKSDIGDIHLEKVTFRYGSQIELFQDLSVTFRRGEMTAVVGESGSGKSTLAALLQNVYQLEGGHIRIGRFALQDLSTVSLRKVVAAVPQSIDVFSGSVIENIALGEFEPDIEKIIRICDQIGLRESIERWPGGFHANLGENGLRLSGGERQRLALARALYRDPEILILDEATSSLDSLAEAFVLKLVEELRRAGKTIIVISHRLSTICGADKIVVLDKGRVVAEGTHADLLTAEGAYARLWRA
SIO_010081: HB778_RS37960
subclass of: SO_0000673
so part of: HB778_RS37960
location: 28094..30235
location: region:28094-30235:1
so has part: feature:28094-30235:1:exon

WP_183465878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28094-30235:1:exon

HB778_RS42355
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42355
pseudo: true
so part of: sequence
location: 31002..>31108
location: region:31002-31108:1
so has part: feature:31002-31108:1:exon
subclass of: SO_0000010

position:31002:1
position: 31002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31108:1
position: 31108
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31002-31108:1:exon

HB778_RS42355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42355
inference: COORDINATES: protein motif:HMM:NF013209.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ArsR family transcriptional regulator
SIO_010081: HB778_RS42355
subclass of: SO_0000673
so part of: HB778_RS42355
location: 31002..>31108
location: region:31002-31108:1
so has part: feature:31002-31108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31002-31108:1:exon

HB778_RS37970
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: glyA
locus tag: HB778_RS37970
old locus tag: HB778_38110
pseudo: true
so part of: sequence
location: 31386..32723
location: region:31386-32723:1
so has part: feature:31386-32723:1:exon
subclass of: SO_0000010

position:31386:1
position: 31386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32723:1
position: 32723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31386-32723:1:exon

HB778_RS37970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: glyA
locus tag: HB778_RS37970
old locus tag: HB778_38110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838202.1
GO function: GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: serine hydroxymethyltransferase
SIO_010081: HB778_RS37970
subclass of: SO_0000673
so part of: HB778_RS37970
location: 31386..32723
location: region:31386-32723:1
so has part: feature:31386-32723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31386-32723:1:exon

HB778_RS37975
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: metK
locus tag: HB778_RS37975
old locus tag: HB778_38115
pseudo: true
so part of: sequence
location: 32779..33953
location: region:32779-33953:1
so has part: feature:32779-33953:1:exon
subclass of: SO_0000010

position:32779:1
position: 32779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33953:1
position: 33953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32779-33953:1:exon

HB778_RS37975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: metK
locus tag: HB778_RS37975
old locus tag: HB778_38115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012536187.1
GO function: GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO process: GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: methionine adenosyltransferase
SIO_010081: HB778_RS37975
subclass of: SO_0000673
so part of: HB778_RS37975
location: 32779..33953
location: region:32779-33953:1
so has part: feature:32779-33953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32779-33953:1:exon

HB778_RS37980
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37980
old locus tag: HB778_38120
pseudo: true
so part of: sequence
location: 34060..>35049
location: region:34060-35049:1
so has part: feature:34060-35049:1:exon
subclass of: SO_0000010

position:34060:1
position: 34060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35049:1
position: 35049
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34060-35049:1:exon

HB778_RS37980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37980
old locus tag: HB778_38120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006206874.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: adenosine kinase
SIO_010081: HB778_RS37980
subclass of: SO_0000673
so part of: HB778_RS37980
location: 34060..>35049
location: region:34060-35049:1
so has part: feature:34060-35049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34060-35049:1:exon

HB778_RS37985
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37985
old locus tag: HB778_38125
so part of: sequence
location: complement(35704..35877)
location: region:35704-35877:-1
so has part: feature:35704-35877:-1:exon
subclass of: SO_0000010

position:35704:-1
position: 35704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35877:-1
position: 35877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35704-35877:-1:exon

HB778_RS37985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37985
old locus tag: HB778_38125
inference: COORDINATES: protein motif:HMM:NF018568.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVPPGQPHLDQAIALSGQYIGTAVMRVPATRYSDGVGASLELKPDLADACANIRMA
SIO_010081: HB778_RS37985
subclass of: SO_0000673
so part of: HB778_RS37985
location: complement(35704..35877)
location: region:35704-35877:-1
so has part: feature:35704-35877:-1:exon

WP_183465729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35704-35877:-1:exon

HB778_RS37990
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37990
old locus tag: HB778_38130
so part of: sequence
location: 36462..38552
location: region:36462-38552:1
so has part: feature:36462-38552:1:exon
subclass of: SO_0000010

position:36462:1
position: 36462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38552:1
position: 38552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36462-38552:1:exon

HB778_RS37990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37990
old locus tag: HB778_38130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838481.1
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolyl oligopeptidase family serine peptidase
translation: MTAFDFRPTLNAPDDDPYLWLEDVEGERALDWTASQSARTLKHCGGTRFERDRAALTMIFDRFDRIPAITRRGQYLYNFWRDAGNPRGLWRRTTLAAYMKADPQWELLLDLDALAASDGEDWIWSGASTEPQRREKAVLRLSRGGSDAVVHREFDLMSLSIVADGFNLPEAKGSIDWLDPDTLLLSSALGDSMVTRSGFARTVRLWKRGADPLTAPAIFEAGCSESLGVSGHVDRTAESERLWFIENTGFFEQIVRTGDKSGPKIEIDFPRDAWWGVFGDWLAVKPGKPWTVGGTTYASDVLIGISLSSFIAGERGFVTLFEPGDRRSLQSFFWNDGKLIISYLADLVPRFETFTPGRQEWTRRALDTVPAEGTVHLWSLDAEDHETNGEILVSAQDPITPPQLLLLDLDTAPPLSASVILKRNPENFDAAGLVVTRHEAVSIDGEMIPYTQVGPADGNGDAPVHLTAYGGFGISLLPSYNSALGKLWLERGGTCVVANIRGGGEFGTRWHDAGRRQGKRLAHDDFAAVAADLVRRGITQPRRIAAEGGSNGGLLIANMLTRYPEHFGALFCTVPLIDMRRYTRLLGASGIDEYGNPDKPEDWTFLKEISAYHAAAPGQPYPPILLATTKRDDRVHPGHARKMAAKLQALGYPAYFYEPSAGGHSHGKDNRERAAFIALGNNFLRSAIGWHGDGVR
SIO_010081: HB778_RS37990
subclass of: SO_0000673
so part of: HB778_RS37990
location: 36462..38552
location: region:36462-38552:1
so has part: feature:36462-38552:1:exon

WP_183465730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36462-38552:1:exon

HB778_RS37995
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS37995
old locus tag: HB778_38135
so part of: sequence
location: 38743..39438
location: region:38743-39438:1
so has part: feature:38743-39438:1:exon
subclass of: SO_0000010

position:38743:1
position: 38743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39438:1
position: 39438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38743-39438:1:exon

HB778_RS37995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS37995
old locus tag: HB778_38135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006328785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpW family protein
translation: MARKRMGVARGVTAAVVLMMVGQQAVAAEPPVAASVPQAGVLVTEAPSPWQIRLRGLGVITKDSGYVNAVPGSGLSYSDTVIPELDITYFFTDNIAAELILGTTYANIDGQGTLGGLGNIGKVWLLPPTLTVQYHFTDFGAFKPYVGAGVNYTIFYNQHAGSADALKVKNTFGTALQVGFDYMVDQHWGVNFDVKKLFLKPDFDVTVAGAKLTGKAELDPWLIGAGVTYRF
SIO_010081: HB778_RS37995
subclass of: SO_0000673
so part of: HB778_RS37995
location: 38743..39438
location: region:38743-39438:1
so has part: feature:38743-39438:1:exon

WP_183455450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38743-39438:1:exon

HB778_RS38000
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38000
old locus tag: HB778_38140
pseudo: true
so part of: sequence
location: <39571..>40393
location: region:39571-40393:1
so has part: feature:39571-40393:1:exon
subclass of: SO_0000010

position:39571:1
position: 39571
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:40393:1
position: 40393
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39571-40393:1:exon

HB778_RS38000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38000
old locus tag: HB778_38140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533398.1
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DPP IV N-terminal domain-containing protein
SIO_010081: HB778_RS38000
subclass of: SO_0000673
so part of: HB778_RS38000
location: <39571..>40393
location: region:39571-40393:1
so has part: feature:39571-40393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39571-40393:1:exon

HB778_RS38005
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38005
old locus tag: HB778_38145
pseudo: true
so part of: sequence
location: complement(<40928..41911)
location: region:40928-41911:-1
so has part: feature:40928-41911:-1:exon
subclass of: SO_0000010

position:40928:-1
position: 40928
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:41911:-1
position: 41911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40928-41911:-1:exon

HB778_RS38005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38005
old locus tag: HB778_38145
inference: COORDINATES: protein motif:HMM:NF024826.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SidA/IucD/PvdA family monooxygenase
SIO_010081: HB778_RS38005
subclass of: SO_0000673
so part of: HB778_RS38005
location: complement(<40928..41911)
location: region:40928-41911:-1
so has part: feature:40928-41911:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40928-41911:-1:exon

HB778_RS38010
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38010
old locus tag: HB778_38150
so part of: sequence
location: 42205..42612
location: region:42205-42612:1
so has part: feature:42205-42612:1:exon
subclass of: SO_0000010

position:42205:1
position: 42205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42612:1
position: 42612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42205-42612:1:exon

HB778_RS38010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38010
old locus tag: HB778_38150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRQYFSMRLIRGGHPLGRSECPCIERARRKLCQTNGQQVCDRVGYLLTADSDQVATAKMFRERFPDKQIISAARRADLTAKEILPHVHDIRSIEKATIEACQFEGAVIIVNGERVAKRPAEYAPPETAAIQIAN
SIO_010081: HB778_RS38010
subclass of: SO_0000673
so part of: HB778_RS38010
location: 42205..42612
location: region:42205-42612:1
so has part: feature:42205-42612:1:exon

WP_183465731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42205-42612:1:exon

HB778_RS38015
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38015
old locus tag: HB778_38155
so part of: sequence
location: complement(42843..43595)
location: region:42843-43595:-1
so has part: feature:42843-43595:-1:exon
subclass of: SO_0000010

position:42843:-1
position: 42843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43595:-1
position: 43595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42843-43595:-1:exon

HB778_RS38015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38015
old locus tag: HB778_38155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533332.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbonic anhydrase
translation: MHRRNLIKGFVALGACPVCVQAAHAVSTHWGYTGPDGPEHWADLDKKNFACSAGTQQSPINIKSAVKAEIPHIAIGWGKGGGNMVNNGHTIQINMPEGSTLTRGDRVYELVQFHFHAPSEHQVAGKTFPMEAHFVHKDTQSGGLGVLGVFLRPGATNVSFAGLAAAFPGKSGEEIAVDEVDPNGLLPASLGYWTYEGSLTTPPCTENVEWMVAMEPVGVDPADIERFTSLYPLNARPIHSPNRRFILGLG
SIO_010081: HB778_RS38015
subclass of: SO_0000673
so part of: HB778_RS38015
location: complement(42843..43595)
location: region:42843-43595:-1
so has part: feature:42843-43595:-1:exon

WP_183465732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42843-43595:-1:exon

HB778_RS42995
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42995
so part of: sequence
location: complement(45713..45838)
location: region:45713-45838:-1
so has part: feature:45713-45838:-1:exon
subclass of: SO_0000010

position:45713:-1
position: 45713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45838:-1
position: 45838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45713-45838:-1:exon

HB778_RS42995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASGGADSLLRRSPEGDIDDPLLVIEETGVVIRRGSFEIGL
SIO_010081: HB778_RS42995
subclass of: SO_0000673
so part of: HB778_RS42995
location: complement(45713..45838)
location: region:45713-45838:-1
so has part: feature:45713-45838:-1:exon

WP_258598557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45713-45838:-1:exon

HB778_RS38020
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38020
old locus tag: HB778_38160
so part of: sequence
location: 46021..46554
location: region:46021-46554:1
so has part: feature:46021-46554:1:exon
subclass of: SO_0000010

position:46021:1
position: 46021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46554:1
position: 46554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46021-46554:1:exon

HB778_RS38020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38020
old locus tag: HB778_38160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin
translation: MTVHKRVPFVTFLTRVRDESVQGPNPYRWEEKTSDDYFAGKRVILFSLPGAFTPTCSTYQLPKFEALYDEFEKEGIEAIYCLSVNDAFVMNAWGKSLGLQKVRLIPDGSGEFTRKMGMLVAKDNLGFGMRSWRYAALINNGVVEQWFEEDGFSDNCEADPYGVSSPQNVLETLKAAA
SIO_010081: HB778_RS38020
subclass of: SO_0000673
so part of: HB778_RS38020
location: 46021..46554
location: region:46021-46554:1
so has part: feature:46021-46554:1:exon

WP_183455271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46021-46554:1:exon

HB778_RS38025
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: rpoN
locus tag: HB778_RS38025
old locus tag: HB778_38165
so part of: sequence
location: 46628..48091
location: region:46628-48091:1
so has part: feature:46628-48091:1:exon
subclass of: SO_0000010

position:46628:1
position: 46628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48091:1
position: 48091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46628-48091:1:exon

HB778_RS38025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: rpoN
locus tag: HB778_RS38025
old locus tag: HB778_38165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878173.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase factor sigma-54
translation: MQSSASLLQRQKQSMIASPQLIESIRLLQLAHTELHQYVGQEIAKNPLLELAPSEEGPSGDDWSIPGEDPDIGAREKDFDKPTSAEAPERFMQSKSTGNTANAPPGAGNAVDNFSVSAETLHDHVARQIALTAFTSQERLIAGQLAAHLEDTGYLQVSLVELASSLNVRADDVERVLGILQHFDPPGLFARTLSECLEIQLRQRDRFDPAMAALVANLEMLARRDFQALKQHCGVDEEDLLDMLHEIRALDPKPGNQFHTGGPECVMPEVWVMPSPGGGWQIELDPNTLPKLLINHTYFAEVSRAAVQNSKDQAFLHECLQNANWLIRSLDQRANTILKVATEIVRQQEAFLEHGVSHLKPLNLRTVAEAINVHESTVSRVTSNKYMLTPRGVFELKYFFTVAIASCEGGDAHSAEAVRHRIKAIIAGESLADVLSDDDIAVRLKETGIDVARRTVTKYREAMNIPSSVQRRREKRLWLEGDQGSAA
SIO_010081: HB778_RS38025
subclass of: SO_0000673
so part of: HB778_RS38025
location: 46628..48091
location: region:46628-48091:1
so has part: feature:46628-48091:1:exon

WP_183455272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46628-48091:1:exon

HB778_RS38030
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38030
old locus tag: HB778_38170
so part of: sequence
location: complement(48113..48733)
location: region:48113-48733:-1
so has part: feature:48113-48733:-1:exon
subclass of: SO_0000010

position:48113:-1
position: 48113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48733:-1
position: 48733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48113-48733:-1:exon

HB778_RS38030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38030
old locus tag: HB778_38170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006199570.1
GO function: GO:0030151 - molybdenum ion binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen fixation protein NifQ
translation: MFAHHYGWLCARQWPRIELKRGFDQHVLACVLSCALEEVEAGEATATESTGLSRAELRDVLTHSFPATAINAFALDELCDPKPEMEEELLHSLLLAHARPGDPASACFAKIVARRAMRNNHLWQDLGLLNRAELSRLLATHFPTLAAGNTQNMKWKKYFYRKLCEAEGFSLCTAPTCRECNDFESCFGPEQGESRLAHIKNGIALD
SIO_010081: HB778_RS38030
subclass of: SO_0000673
so part of: HB778_RS38030
location: complement(48113..48733)
location: region:48113-48733:-1
so has part: feature:48113-48733:-1:exon

WP_183455451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48113-48733:-1:exon

HB778_RS38035
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: fdxB
locus tag: HB778_RS38035
old locus tag: HB778_38175
pseudo: true
so part of: sequence
location: complement(<48755..49051)
location: region:48755-49051:-1
so has part: feature:48755-49051:-1:exon
subclass of: SO_0000010

position:48755:-1
position: 48755
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:49051:-1
position: 49051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48755-49051:-1:exon

HB778_RS38035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: fdxB
locus tag: HB778_RS38035
old locus tag: HB778_38175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003532785.1
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ferredoxin III, nif-specific
SIO_010081: HB778_RS38035
subclass of: SO_0000673
so part of: HB778_RS38035
location: complement(<48755..49051)
location: region:48755-49051:-1
so has part: feature:48755-49051:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48755-49051:-1:exon

HB778_RS38040
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38040
old locus tag: HB778_38180
so part of: sequence
location: complement(49349..50401)
location: region:49349-50401:-1
so has part: feature:49349-50401:-1:exon
subclass of: SO_0000010

position:49349:-1
position: 49349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50401:-1
position: 50401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49349-50401:-1:exon

HB778_RS38040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38040
old locus tag: HB778_38180
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533497.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LLM class flavin-dependent oxidoreductase
translation: MEFATFILAAQRGYHQSSDSVIRNSIEQAVLSEQAGFNTAWFAEHHFNNYSLVPSPLMMVAHCAGLTSTIRLGTAVCVLPLYHPQRLLSEIGFADVVANGRLELGVGVGYQQFEFERFGVNIDEAPAIFSEYLDILLKGLNQNVFEHDGRYEKIPPTAISVPTVQKPTPPIWIAGGPLRMSRAYREGHNFFVTAFHNGLETLSTLRESIEEAAASEGKNVTDAKISLLRCCYASDDQAEINSYLDNARFQRRLSEALHQRRQQSLDGYLLQETPTQQDLSLETMRENLPIGSVNRVIDRLLEEMDILKPDQIAIQTQLGDFDQKTMLRQIELWGDKIIPAVNKSLPQARV
SIO_010081: HB778_RS38040
subclass of: SO_0000673
so part of: HB778_RS38040
location: complement(49349..50401)
location: region:49349-50401:-1
so has part: feature:49349-50401:-1:exon

WP_183465733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49349-50401:-1:exon

HB778_RS38045
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38045
old locus tag: HB778_38185
so part of: sequence
location: complement(50718..52316)
location: region:50718-52316:-1
so has part: feature:50718-52316:-1:exon
subclass of: SO_0000010

position:50718:-1
position: 50718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52316:-1
position: 52316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50718-52316:-1:exon

HB778_RS38045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38045
old locus tag: HB778_38185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MKREGRIVIITGAAGGIGRALVDILAGGGDTVVAVDLPGSGVVELARGLGDPHLGLECDVSRDVEVLALYGRVEAQFAQIDVLINNAAIGPTMTATVDTAADAFRRGLAVNLIGPFVMAREAARRMKLDGAIVNVASLAGMVGSPRRNAYAASKAGLISLTKSLACEWASRGIRVTAVAPGYVRTPMVAELERAGKMDLAAVRRRVPMGRMARPDEIARAVRFLTRVEARYITGSVLVVDGGWTSFNQPGDAHPAVEGTPRSELSSESERTDARIVLVTGGANGIGAAIVRRFATTGDTVVIADKDRAAATVLAGSLGGKNLAKFVDVAIESEVVALFEEMRGRFGRIDIPVNGASIADTFVAGIEQMPAEIDQVLDVNLTGAFTCAREAAKAMRPGGVILNLGSINSFLPFAPRHAYGASKAGMDMLTRCMAAELGPIGIRTATVAPGYIRTPALAQLKAGRIDSTAIARRIPMGMMGRPEDVADAAFFLASSDASYINGSILYVDGGWTSFGDAGNASEFYDEYFAEDAG
SIO_010081: HB778_RS38045
subclass of: SO_0000673
so part of: HB778_RS38045
location: complement(50718..52316)
location: region:50718-52316:-1
so has part: feature:50718-52316:-1:exon

WP_183465734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50718-52316:-1:exon

HB778_RS38050
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38050
old locus tag: HB778_38190
so part of: sequence
location: complement(52652..53257)
location: region:52652-53257:-1
so has part: feature:52652-53257:-1:exon
subclass of: SO_0000010

position:52652:-1
position: 52652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53257:-1
position: 53257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52652-53257:-1:exon

HB778_RS38050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38050
old locus tag: HB778_38190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006199573.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MDQGKITELLDREAIRDCLYRYCRGIDRADEAALRSAYWLDAHDNHGAYCGSAEGFIRFALGVFQTGHRNIHQITNILIEFITPTEAAVESYFTALQRGPDKHGEVRQTLLCGRYCDLFQKREGEWRIAERTVVYDWLEEQIPAAIPEAERFGSRQPIGAPHPDDPVYALEKHRILLAIRPAEVPNGDKSYDDFAMAQRSR
SIO_010081: HB778_RS38050
subclass of: SO_0000673
so part of: HB778_RS38050
location: complement(52652..53257)
location: region:52652-53257:-1
so has part: feature:52652-53257:-1:exon

WP_183465735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52652-53257:-1:exon

HB778_RS38055
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38055
old locus tag: HB778_38195
so part of: sequence
location: complement(53426..53671)
location: region:53426-53671:-1
so has part: feature:53426-53671:-1:exon
subclass of: SO_0000010

position:53426:-1
position: 53426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53671:-1
position: 53671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53426-53671:-1:exon

HB778_RS38055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38055
old locus tag: HB778_38195
inference: COORDINATES: protein motif:HMM:NF024851.2
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin
translation: MRIIVHKPKCQGHARCSAQAPDIFKLDEEGYILPGDIEVAEGKHLLASRGTRSCPERALELDATPAARAESDVIQPRGRRV
SIO_010081: HB778_RS38055
subclass of: SO_0000673
so part of: HB778_RS38055
location: complement(53426..53671)
location: region:53426-53671:-1
so has part: feature:53426-53671:-1:exon

WP_183465736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53426-53671:-1:exon

HB778_RS38060
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38060
old locus tag: HB778_38200
so part of: sequence
location: complement(53715..54932)
location: region:53715-54932:-1
so has part: feature:53715-54932:-1:exon
subclass of: SO_0000010

position:53715:-1
position: 53715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54932:-1
position: 54932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53715-54932:-1:exon

HB778_RS38060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38060
old locus tag: HB778_38200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913582.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MAINWVPDHIPPEMVRDFSLFKSPGMLPAPNGDPHAAVACVHAGPPIFYSPYNTRDGRGTWVITRASDQRRVLQDAETFSSHRSIFASALGENWPMIPLELDPPAHGVFRSLLNPLLSPKRAMVLEPAIRERAVALIDRIAAAGTCCDVMKEFAFPFTVNIFLRFLGLPDHRLDTFVGWAKDLIHGDHLKRPAAAQTIVAFIDELATKRRKDPVDDFMTFILQAQVEGRQLSDVEVRGIGVLVFVAGLDTVAAAIGFDLAYLARNLKDQELLRSEPDRIALAVEELLRAYPTVQMIRVATKDIDFEGVPIRKGDYVSCATMIANRDPAEFECPNTIDLARENNRHAAFGYGPHRCLGSHLARREIVIGLEEWLARIPAFRIKKGTAPITSGGHVFGIKNLILHWS
SIO_010081: HB778_RS38060
subclass of: SO_0000673
so part of: HB778_RS38060
location: complement(53715..54932)
location: region:53715-54932:-1
so has part: feature:53715-54932:-1:exon

WP_183465737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53715-54932:-1:exon

HB778_RS38065
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38065
old locus tag: HB778_38205
so part of: sequence
location: complement(55848..56408)
location: region:55848-56408:-1
so has part: feature:55848-56408:-1:exon
subclass of: SO_0000010

position:55848:-1
position: 55848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56408:-1
position: 56408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55848-56408:-1:exon

HB778_RS38065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38065
old locus tag: HB778_38205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MSEFDVEAALRSLRGFPTKTLARRPDDQLPFVNEGELGGQALLLDTCVYIDRLQGKAPALVKQIMDGRHNNHSAICIQELAHTLGVLKPDDPRTGGVHKAVSEVIRSIPGHRILTPDADVLGRAAVLNGVLCRLQGYQDDQKLRCLHDCTLYLQASKSGLVLLTRNIADYDFCRQLIPGGKVLFYR
SIO_010081: HB778_RS38065
subclass of: SO_0000673
so part of: HB778_RS38065
location: complement(55848..56408)
location: region:55848-56408:-1
so has part: feature:55848-56408:-1:exon

WP_183465738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55848-56408:-1:exon

HB778_RS38070
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38070
old locus tag: HB778_38210
so part of: sequence
location: complement(56420..56788)
location: region:56420-56788:-1
so has part: feature:56420-56788:-1:exon
subclass of: SO_0000010

position:56420:-1
position: 56420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56788:-1
position: 56788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56420-56788:-1:exon

HB778_RS38070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38070
old locus tag: HB778_38210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKTLGMRSLSTAPQQRLVAKKKRKRSLIRKDANKDMPGEQKFVVRQTLRAAIRKGLIGSKDERITARLSHALIEQAKRQTGIKGDTELLEFALANVALEDNFPATMDKLAGTIDPDIKLGF
SIO_010081: HB778_RS38070
subclass of: SO_0000673
so part of: HB778_RS38070
location: complement(56420..56788)
location: region:56420-56788:-1
so has part: feature:56420-56788:-1:exon

WP_244662172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56420-56788:-1:exon

HB778_RS38075
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38075
old locus tag: HB778_38215
so part of: sequence
location: 57186..57407
location: region:57186-57407:1
so has part: feature:57186-57407:1:exon
subclass of: SO_0000010

position:57186:1
position: 57186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57407:1
position: 57407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57186-57407:1:exon

HB778_RS38075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38075
old locus tag: HB778_38215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMVAIESPDGVPSDNDTLVQLREAGTDLARGTITTCPAAMNIFRETPGTAALLALMRQRSQSILQHPNWRAYR
SIO_010081: HB778_RS38075
subclass of: SO_0000673
so part of: HB778_RS38075
location: 57186..57407
location: region:57186-57407:1
so has part: feature:57186-57407:1:exon

WP_183465739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57186-57407:1:exon

HB778_RS38080
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38080
old locus tag: HB778_38220
so part of: sequence
location: 57404..58621
location: region:57404-58621:1
so has part: feature:57404-58621:1:exon
subclass of: SO_0000010

position:57404:1
position: 57404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58621:1
position: 58621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57404-58621:1:exon

HB778_RS38080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38080
old locus tag: HB778_38220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533492.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTESATGFLEAVPHDPKKPHERSRPAWGAVISLALGTFGLVTAEFLPASVLTPLAHDLGITEGAAGQTMTATAIAGAISAPTMAIITKRLDRRIVLWAMTLLQILSNVLAEVAWSLPVFLAARVVLGIALGGFWSISASVAMRLVPNHLLPRAMSIILTGVSVAIVCAPPMGAYVGDIWGWRAAFTIAAVVNAVTLLVQFVTIPMLPPVEIAGFRSLLDLANKPMIKMALLVVLLVASGHFASFTYIRAFLERIPALDSKTIPLVLLASGIGGFFGNLTGAFLAKHSLKAVAALPPLLIAIAATSLLMVGASASASVVAIAVWSFAFGAVPVGLQTWMVLRAVPGQAESAGVLMAATFQVAIAAGAIFGGLLVKYAGVHSVFAYSAVATFLAALTVFLLGPKRAT
SIO_010081: HB778_RS38080
subclass of: SO_0000673
so part of: HB778_RS38080
location: 57404..58621
location: region:57404-58621:1
so has part: feature:57404-58621:1:exon

WP_183465740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57404-58621:1:exon

HB778_RS38085
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38085
old locus tag: HB778_38225
so part of: sequence
location: complement(59680..60747)
location: region:59680-60747:-1
so has part: feature:59680-60747:-1:exon
subclass of: SO_0000010

position:59680:-1
position: 59680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60747:-1
position: 60747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59680-60747:-1:exon

HB778_RS38085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38085
old locus tag: HB778_38225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008876362.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ChuX/HutX family heme-like substrate-binding protein
translation: MDQREKPSPDQIRRAQEDSPKIREHDLAAKLSISEAELVAAHCGSGAARIEPRVNDLLIGLEAVGEVRAVTRNQSAVHEKIGLYNKVVTGNHHAMVLGDAINLRIFPKGWAHGFAVEKRDDGNIRRSLQFFDAAGAAVHQVDVRPASNLYAYQKLVAELASSNQEPILWVKANGADSDAEIPDQAAMVTELREHWSRLTDVHQFFDMLKTLKLSRCRALRMVGQDYAWQLDNAAVGAMFQCASEDEMPIMCFVGNRGCIQIHSGPIKSVKPIGPRINVLDETFRLHLTTHHIREVWAVRKPTRDGHLTSLEAYGADGRMIIQFFGERPEGECERGDWRLLAETLPRIPTPTDRVR
SIO_010081: HB778_RS38085
subclass of: SO_0000673
so part of: HB778_RS38085
location: complement(59680..60747)
location: region:59680-60747:-1
so has part: feature:59680-60747:-1:exon

WP_183455280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59680-60747:-1:exon

HB778_RS38090
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38090
old locus tag: HB778_38230
so part of: sequence
location: 61449..61769
location: region:61449-61769:1
so has part: feature:61449-61769:1:exon
subclass of: SO_0000010

position:61449:1
position: 61449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61769:1
position: 61769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61449-61769:1:exon

HB778_RS38090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38090
old locus tag: HB778_38230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006331684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster assembly accessory protein
translation: MITLTHTAVAAVKTVLSRASEPAEGFRIMVQTGGCAGFKYSMGPESVLREGDAIIEADGVKVFVDVGSQPHVAGMTVDFVTGLESSGFVFDNPNAREKCACGKSFG
SIO_010081: HB778_RS38090
subclass of: SO_0000673
so part of: HB778_RS38090
location: 61449..61769
location: region:61449-61769:1
so has part: feature:61449-61769:1:exon

WP_183455281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61449-61769:1:exon

HB778_RS38095
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifS
locus tag: HB778_RS38095
old locus tag: HB778_38235
so part of: sequence
location: 62525..63742
location: region:62525-63742:1
so has part: feature:62525-63742:1:exon
subclass of: SO_0000010

position:62525:1
position: 62525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63742:1
position: 63742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62525-63742:1:exon

HB778_RS38095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifS
locus tag: HB778_RS38095
old locus tag: HB778_38235
EC number: 2.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004126059.1
GO function: GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase NifS
translation: MRPVYLDNNATTRVDPEVVQTMLPFFTDRFGNPSSTHDFGASAFAAVKKARLQLQALIGAELDHEIIFTSGGTESDNAAILSALEVLPSRTEILISAVEHPAVLTLCTHLEKTRAVTVHRIPVDRQGRLDLDAYRAALSPRVAIVSIMWANNETGTIFPVGELAELAKEAGALFHTDAVQAVGKVPMDLKSTAIDMLSLSGHKLHGPKGIGALFVKRAVPFRSMIKGGHQEHDRRGGTENTPGIAGLGMAAQLALKFVDDATTRVKSLRDRLEDGILERVPNTFVNGDPLERLPNTANIGFAHVEGDGIPLLLSRAGIACSSGSACTSGSLESSHVLRAMKTPHGAVRFSLARDNGEADIDRVLEVLPPIVEKVRGLPSPGPARRGNEDHQSGLGQSGSRIDFLS
SIO_010081: HB778_RS38095
subclass of: SO_0000673
so part of: HB778_RS38095
location: 62525..63742
location: region:62525-63742:1
so has part: feature:62525-63742:1:exon

WP_183465741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62525-63742:1:exon

HB778_RS38100
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifV
locus tag: HB778_RS38100
old locus tag: HB778_38240
so part of: sequence
location: 63739..64890
location: region:63739-64890:1
so has part: feature:63739-64890:1:exon
subclass of: SO_0000010

position:63739:1
position: 63739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64890:1
position: 64890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63739-64890:1:exon

HB778_RS38100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifV
locus tag: HB778_RS38100
old locus tag: HB778_38240
EC number: 2.3.3.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018097510.1
GO function: GO:0004410 - homocitrate synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homocitrate synthase
translation: MNRGVFLNDTTLRDGEQAPGVSFTIAEKLELAESLAAAGIPEIEIGTPSMGGDEIETIRAAVARSLPVRLTAWCRMTSRDLEAAIESGVTAVNLSLPASDIQLAAKLGLDQGAALQIIAQMVGRAAAHGFFVAVGCEDASRADRDHLARVIETAARAGASRVRLADTVGVLDPFSTFEIVAQLAALSPIDLEFHAHNDLGLAVANTLAAIRAGARHASVTVLGLGERAGNAALEEVATAMAVLDGADTGIELTALPDLAAQVAWAACRQTAAMKPIVGADVFSHESGIHVAGLLKDPRTYQGLDPALVGRCRRIVIGKHSGATAIAYVLGDSGRDLDPDLAAAMVARVRRKATETKSTVTATQLVELYDTLRSEAAGRDLGKE
SIO_010081: HB778_RS38100
subclass of: SO_0000673
so part of: HB778_RS38100
location: 63739..64890
location: region:63739-64890:1
so has part: feature:63739-64890:1:exon

WP_183455283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63739-64890:1:exon

HB778_RS38105
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38105
old locus tag: HB778_38245
so part of: sequence
location: 64897..65172
location: region:64897-65172:1
so has part: feature:64897-65172:1:exon
subclass of: SO_0000010

position:64897:1
position: 64897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65172:1
position: 65172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64897-65172:1:exon

HB778_RS38105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38105
old locus tag: HB778_38245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFILDHFLRIGSRAGRRKAARLALMVHKVIADVKARDRRVGAHALMENVPPRVTLVGVAAFLNGRFDLDVTCPMTASHSRLQISRCDERT
SIO_010081: HB778_RS38105
subclass of: SO_0000673
so part of: HB778_RS38105
location: 64897..65172
location: region:64897-65172:1
so has part: feature:64897-65172:1:exon

WP_183455284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64897-65172:1:exon

HB778_RS38110
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifW
locus tag: HB778_RS38110
old locus tag: HB778_38250
so part of: sequence
location: 65204..65584
location: region:65204-65584:1
so has part: feature:65204-65584:1:exon
subclass of: SO_0000010

position:65204:1
position: 65204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65584:1
position: 65584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65204-65584:1:exon

HB778_RS38110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifW
locus tag: HB778_RS38110
old locus tag: HB778_38250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase stabilizing/protective protein NifW
translation: MTCSADGHTVDVTDILARLKGLSAAEEFFAVLGASYDPKVLDVSRLHIMKRVGEYLAEEDFSGLPDQVIAARVRTKLERAYEDFAASSPLTHRVFKVLKDHDPNKPAMPGRTFVPFDAALKRFEKE
SIO_010081: HB778_RS38110
subclass of: SO_0000673
so part of: HB778_RS38110
location: 65204..65584
location: region:65204-65584:1
so has part: feature:65204-65584:1:exon

WP_183465742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65204-65584:1:exon

HB778_RS38115
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38115
old locus tag: HB778_38255
so part of: sequence
location: 65769..66620
location: region:65769-66620:1
so has part: feature:65769-66620:1:exon
subclass of: SO_0000010

position:65769:1
position: 65769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66620:1
position: 66620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65769-66620:1:exon

HB778_RS38115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38115
old locus tag: HB778_38255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016558440.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transfer flavoprotein subunit beta/FixA family protein
translation: MHIVICIKQVPDSAQIRVHPVTNTIMRQGVPTIINPYDLFALEEALRLRDAYGGEVTVLSMGPPMAEDSLRKALGYGADRAVLLTDRYFAGSDTLATSFALSQAIAKVGETFGPPDIVFTGKQTIDGDTAQVGPGIAKRLDLQQLTYVAKIGSIDLAAREIEVERRCEGGTQMLKSRLPCLITVLEGTNEIRRGSFEDALCAARSQIVKWTAVAAGIEDLTRCGLRGSPTVVKRVFAPTARAEKAEQIETAEKTLRDAADELIAAIFTRQPPLEHELAFNNGA
SIO_010081: HB778_RS38115
subclass of: SO_0000673
so part of: HB778_RS38115
location: 65769..66620
location: region:65769-66620:1
so has part: feature:65769-66620:1:exon

WP_183465743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65769-66620:1:exon

HB778_RS38120
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38120
old locus tag: HB778_38260
so part of: sequence
location: 66637..67746
location: region:66637-67746:1
so has part: feature:66637-67746:1:exon
subclass of: SO_0000010

position:66637:1
position: 66637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67746:1
position: 67746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66637-67746:1:exon

HB778_RS38120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38120
old locus tag: HB778_38260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536549.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transfer flavoprotein subunit alpha/FixB family protein
translation: MSTANREPARPAAGRAGIKKELPDRFKDYRHVWVFIELERGQVHPVSFELLGEGRKLADKLGVQLAGVVLGPPGEATWYAVAEAFAYGADLVYIAEAPLLADYRNEPFTKVMTDLVDTHKPEILLLGATTLGRDLAGSVATTLQTGLTADCTELDVDTDGSLAATRPTFGGSLLCTIYTLNYRPQMATVRARVMPMPQRTDKPVGRIIQHKVSLAEDEIVTKVLGFLPDSQSAKANLAYADVVVAGGLGLGAAENLQLVKNLARAIGAEHGCSRPLVQKGWMPADRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADLIVAINTDPTAPIFDFAHLGIVTDAIRFLPALTEAFTRRLSPHSRDKLAS
SIO_010081: HB778_RS38120
subclass of: SO_0000673
so part of: HB778_RS38120
location: 66637..67746
location: region:66637-67746:1
so has part: feature:66637-67746:1:exon

WP_183455287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66637-67746:1:exon

HB778_RS38125
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38125
old locus tag: HB778_38265
so part of: sequence
location: 67757..69064
location: region:67757-69064:1
so has part: feature:67757-69064:1:exon
subclass of: SO_0000010

position:67757:1
position: 67757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69064:1
position: 69064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67757-69064:1:exon

HB778_RS38125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38125
old locus tag: HB778_38265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MIEEKFDAIVVGAGMSGNAAAYIMASNGLNVLQLERGEYPGSKNVQGAIMYANMLEKIIPDFRDDAPLERHLVEQRLWVMDETSHTGIHYRSDDFNEVKPNRYTIIRAQFDKWFSRKVREAGATVLCETTVTELVRDAQDKVVGVRTDRAGGPIFADVVVLAEGVSGLLGTRAGLRKMPKPETVALAVKEMHFLPEEVIEQRFGVKGDEGCVIEAVGTISRSMAGLGFLYTNKESISLGIGCLVSDFAATMESPYVLLDAFKNHPSIRPLIAGSEVKEYAAHLIPEGGHKAIPQLFGDGWVVVGDAAQLNNAIHREGSNLAMTSGRIAAEAIVGVKRRNNPMTRRNLTIYKTMLDNSFVVKDLRKYKDMPALIHTNSSNFFTTYPRLISLAAQNLMRVDGTPKIEKEKATTRAFINVRSRWGLVSDAVRLALAWR
SIO_010081: HB778_RS38125
subclass of: SO_0000673
so part of: HB778_RS38125
location: 67757..69064
location: region:67757-69064:1
so has part: feature:67757-69064:1:exon

WP_183455288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67757-69064:1:exon

HB778_RS38130
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38130
old locus tag: HB778_38270
so part of: sequence
location: 69076..69375
location: region:69076-69375:1
so has part: feature:69076-69375:1:exon
subclass of: SO_0000010

position:69076:1
position: 69076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69375:1
position: 69375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69076-69375:1:exon

HB778_RS38130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38130
old locus tag: HB778_38270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin family protein
translation: MTIAVTNLRVEDKLYQNRYLVDPGRPHIKVRPHESPSANLRALTHICPAKCYELNDKGQVEITADGCMECGTCRILCESNGEIEWNYPRGGFGVLFKFG
SIO_010081: HB778_RS38130
subclass of: SO_0000673
so part of: HB778_RS38130
location: 69076..69375
location: region:69076-69375:1
so has part: feature:69076-69375:1:exon

WP_183455289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69076-69375:1:exon

HB778_RS38135
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifA
locus tag: HB778_RS38135
old locus tag: HB778_38275
so part of: sequence
location: 69543..71282
location: region:69543-71282:1
so has part: feature:69543-71282:1:exon
subclass of: SO_0000010

position:69543:1
position: 69543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71282:1
position: 71282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69543-71282:1:exon

HB778_RS38135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifA
locus tag: HB778_RS38135
old locus tag: HB778_38275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019863284.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nif-specific transcriptional activator NifA
translation: MALMPSDRLEEEGPSNTLPEPRINSIHEPDISPRGFYEISQVLTAPTRLEITIANVVNTLSSFVQLRHGAIVVLDAEAAPGITAIVGSSHPSQSEIGRVIPQAAIDRIVATEAPLIIQDVGKSELFQAEVQPSSSGGTIPITFIGIPLVAEHEILGTLSIDRVGEGESISSGDEDVRFLTMVANLVGRTIRLHRMLSMDGQRYIGEQGRPEKSFDENRADAARHRHIKIDGIIGESLALKRVLETVSVVARTNSTVLLRGESGTGKEFFAQAIHKLSARGKKAFVKLNCAALSESVLESELFGHEKGSFTGAISQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTRTLQVDVRLICATNKDLETAVLNGEFRADLYYRINVVPIILPPLRKRAGDIPRLANAFLERFNKENHRELAFAPLALDLISQCYFPGNVRELENCVQRTATLARSTTITPSDFACQNNQCLSSLLWKGAGPSHGGNATDELSKMPIRRIEAPEGFSPVKACDPNDPACPAKGRHLTERERLTDAMQKAGWVQAKAARVLGLTPRQVGYALRRYGIEVKKF
SIO_010081: HB778_RS38135
subclass of: SO_0000673
so part of: HB778_RS38135
location: 69543..71282
location: region:69543-71282:1
so has part: feature:69543-71282:1:exon

WP_183465744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69543-71282:1:exon

HB778_RS38140
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifB
locus tag: HB778_RS38140
old locus tag: HB778_38280
pseudo: true
so part of: sequence
location: 71522..73002
location: region:71522-73002:1
so has part: feature:71522-73002:1:exon
subclass of: SO_0000010

position:71522:1
position: 71522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73002:1
position: 73002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71522-73002:1:exon

HB778_RS38140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifB
locus tag: HB778_RS38140
old locus tag: HB778_38280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053432.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrogenase cofactor biosynthesis protein NifB
SIO_010081: HB778_RS38140
subclass of: SO_0000673
so part of: HB778_RS38140
location: 71522..73002
location: region:71522-73002:1
so has part: feature:71522-73002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71522-73002:1:exon

HB778_RS38145
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38145
old locus tag: HB778_38285
so part of: sequence
location: 73033..73227
location: region:73033-73227:1
so has part: feature:73033-73227:1:exon
subclass of: SO_0000010

position:73033:1
position: 73033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73227:1
position: 73227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73033-73227:1:exon

HB778_RS38145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38145
old locus tag: HB778_38285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MAFKIIASQCTQCGACEFECPSVAIKFKGEAYVIDPNKCTECKEAADTQQCVSVCPVPKTCVPA
SIO_010081: HB778_RS38145
subclass of: SO_0000673
so part of: HB778_RS38145
location: 73033..73227
location: region:73033-73227:1
so has part: feature:73033-73227:1:exon

WP_183455291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73033-73227:1:exon

HB778_RS38150
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38150
old locus tag: HB778_38290
so part of: sequence
location: 73296..73616
location: region:73296-73616:1
so has part: feature:73296-73616:1:exon
subclass of: SO_0000010

position:73296:1
position: 73296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73616:1
position: 73616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73296-73616:1:exon

HB778_RS38150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38150
old locus tag: HB778_38290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913565.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen fixation protein NifZ
translation: MWLGREQDIEIRKPPRFTPGERVRATRHIKNDGTYPGREIGENLVRKGDEGYVRDIGTFLQQFFIYAVEWIDRGTVVGMRARELMSLDKAEAPCSAESSAREGTAR
SIO_010081: HB778_RS38150
subclass of: SO_0000673
so part of: HB778_RS38150
location: 73296..73616
location: region:73296-73616:1
so has part: feature:73296-73616:1:exon

WP_183455454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73296-73616:1:exon

HB778_RS38155
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifT
locus tag: HB778_RS38155
old locus tag: HB778_38295
so part of: sequence
location: 73613..73825
location: region:73613-73825:1
so has part: feature:73613-73825:1:exon
subclass of: SO_0000010

position:73613:1
position: 73613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73825:1
position: 73825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73613-73825:1:exon

HB778_RS38155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifT
locus tag: HB778_RS38155
old locus tag: HB778_38295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913564.1
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative nitrogen fixation protein NifT
translation: MKVMIRRTGAGLSAYLPKKDCEEAIIKLENEHLWGGAITLRNGWQFVLPDLPPDTRLPITVEARKISDED
SIO_010081: HB778_RS38155
subclass of: SO_0000673
so part of: HB778_RS38155
location: 73613..73825
location: region:73613-73825:1
so has part: feature:73613-73825:1:exon

WP_183455292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73613-73825:1:exon

HB778_RS38160
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38160
old locus tag: HB778_38300
so part of: sequence
location: 73861..74772
location: region:73861-74772:1
so has part: feature:73861-74772:1:exon
subclass of: SO_0000010

position:73861:1
position: 73861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74772:1
position: 74772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73861-74772:1:exon

HB778_RS38160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38160
old locus tag: HB778_38300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MNTILNLGHLVVIQGSFAEKLLDLARNALGADEMIPYLGPGLLRLSSAEPSVPCTPEAIAAALNSRAPAPSKIRTNMWSVAQFIEQRRHRRTLQAWMAEIFAAPAAPTVLHTWLARLPLSLIIDSWYDSAMRTTLAEAGRTDVVEIQGVTRANEFGDIWTKAYDLSGTELEPGSAAKTVLYTPHGSIRPAANFLVADSDYVEVLTEIDLQTPIPDVVKERRTYRGLFFVGCRFNDQMLRTFARQIMKRSKGPHYAVMDAAILTKNERRFLAASAITVIDMPLGEAAARLVGSGTAVDGGQDFR
SIO_010081: HB778_RS38160
subclass of: SO_0000673
so part of: HB778_RS38160
location: 73861..74772
location: region:73861-74772:1
so has part: feature:73861-74772:1:exon

WP_183465745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73861-74772:1:exon

HB778_RS38165
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38165
old locus tag: HB778_38305
so part of: sequence
location: 74841..76709
location: region:74841-76709:1
so has part: feature:74841-76709:1:exon
subclass of: SO_0000010

position:74841:1
position: 74841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76709:1
position: 76709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74841-76709:1:exon

HB778_RS38165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38165
old locus tag: HB778_38305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533516.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MGTDAIGGATKPLNSSKHEQAAGWGRGFSTLLRITRMNLRNRWQVAFAFGSTIVAAILQLLIPQLLGRAVDLTQIAIGGGIAAIAAQQALWTSALLLLAASTLRGLFTMAQNYFAEAVGHHVAYELRLACYDKIQRLSFSFHDRVHSGDLITLGMLDLDGVRMYFSTALVRMLLLTMLMGIGAYTMISTDPMLGVIALSFVPFVAWRSSVTQLKLRATWLDLQERLSVLGRVMEENLAGIRVVRAFSAQAYEMVKFDRASKNALALAHEQVDVYVPNTSAMTLSFFLAMGLVLWIGCNKLIAGQISVGTLATFLAFMTILQMPVRQIGLMVNGFARAYTCGSRLFGLLDQDITIRDASGAKPLEISEGTLSFHNVSFVYPGTGNRPILKNISFCARRGETIAIVGPPGSGKSTIAHLIARFYDVTGGTITLDGQDIRAVTLATLRKEVAVVQQDAFLFTTTIENNIAYGDPWAKEQRIKRASESAQLHDYILSLPAGYKTVVGERGASLSGGQRQRLTIARTMMLRPSIVIFDDSTAAIDAATEQRIRAAIRRFAKDRVTIIIAHRLSSLRHADRILFIDNGEIVERGTHQELLAKRGRYKALYDLQLRPEDDSAITHRGAP
SIO_010081: HB778_RS38165
subclass of: SO_0000673
so part of: HB778_RS38165
location: 74841..76709
location: region:74841-76709:1
so has part: feature:74841-76709:1:exon

WP_183455294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74841-76709:1:exon

HB778_RS38170
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38170
old locus tag: HB778_38310
pseudo: true
so part of: sequence
location: 76709..78611
location: region:76709-78611:1
so has part: feature:76709-78611:1:exon
subclass of: SO_0000010

position:78611:1
position: 78611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76709-78611:1:exon

HB778_RS38170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38170
old locus tag: HB778_38310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533517.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
SIO_010081: HB778_RS38170
subclass of: SO_0000673
so part of: HB778_RS38170
location: 76709..78611
location: region:76709-78611:1
so has part: feature:76709-78611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76709-78611:1:exon

HB778_RS38175
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifA
locus tag: HB778_RS38175
old locus tag: HB778_38315
so part of: sequence
location: complement(78753..80573)
location: region:78753-80573:-1
so has part: feature:78753-80573:-1:exon
subclass of: SO_0000010

position:78753:-1
position: 78753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80573:-1
position: 80573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78753-80573:-1:exon

HB778_RS38175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifA
locus tag: HB778_RS38175
old locus tag: HB778_38315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533522.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nif-specific transcriptional activator NifA
translation: MLDLKNNRESEPTAEQTPICCTSLGAKTDDSKSATINAVAVVPSQESALSGISEISQALTADSRLEVALAKVVGLLRSFVQMRHGMISLFDGDGELETTVGASCNESCNERGRMYMPRKAIDQILTTAMPLMAENIAVHSAFTTADLDALGVSDNIPVSFIGVPIRVDANVVGTLTIDRVVDSGSRFWLDYNLHLLPLIANLVGQAVKLHRSYLGDRVHPISEKDRQQKGFSELQHPAREPNQIHVKGMIGDSSALRGLRQKVTVVAKAKITVLLRGESGTGKELVAKAIHELSPRAKRPFIKLNCAALSETVLESELFGHEKGAFTSAFNSRKGRFELADKGTLFLDEIGEISASFQAKLLRVLQEQEFERVGGNQTIKVDVRVIAATNKDLEEAVARNEFRADLYYRLSVVPLLVPALRERRSDIPLLAAEFLKNFNDENGRMLTFDPSAIEVLINCDFPGNIRELENCVYRTAVLAAGPSIGRDDFACRQGQCFAAALRKSRSGNVAMQPGPIVPLPVIPAIPPAAAASSAAVAVPPETIGQPLRGPAGAVHFNGTTMTDAERVIAAMETCGWVQAKAARLLGLSPRQIGYVLRKYGIEIKRL
SIO_010081: HB778_RS38175
subclass of: SO_0000673
so part of: HB778_RS38175
location: complement(78753..80573)
location: region:78753-80573:-1
so has part: feature:78753-80573:-1:exon

WP_183465746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78753-80573:-1:exon

HB778_RS38180
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38180
old locus tag: HB778_38320
so part of: sequence
location: 81225..82142
location: region:81225-82142:1
so has part: feature:81225-82142:1:exon
subclass of: SO_0000010

position:81225:1
position: 81225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82142:1
position: 82142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81225-82142:1:exon

HB778_RS38180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38180
old locus tag: HB778_38320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MRFKGLDLNLLVVLDALLAERGLTAAARRINLSQPAMSAAVARLRDYFGDELFTTSGRERFLTPRATALAPAVRDALLHIHCSIISSDPFNPAQSDRRFRIIISDFATLVFLEKVVERVAREAPAVSFELLPVDDGPDELLQRGDVDFLILPDFFMSSPHPSVALFDETLVCVGCPTNKQLPRQLTFERYMSMRHVSVRFGRMLKPAFEEWFLLEHGIKRRVEVVVHGFSMIPPMVSGTARIATMPLRLVRHFKKTFPLRIVELPLPLPAFTEAVQWPAHHSSDPASIWMREIMMQEASRMAAPL
SIO_010081: HB778_RS38180
subclass of: SO_0000673
so part of: HB778_RS38180
location: 81225..82142
location: region:81225-82142:1
so has part: feature:81225-82142:1:exon

WP_183465747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81225-82142:1:exon

HB778_RS38185
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38185
old locus tag: HB778_38325
so part of: sequence
location: 82670..83641
location: region:82670-83641:1
so has part: feature:82670-83641:1:exon
subclass of: SO_0000010

position:82670:1
position: 82670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83641:1
position: 83641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82670-83641:1:exon

HB778_RS38185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38185
old locus tag: HB778_38325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MRFKGLDLNLLVVLDALLGERNLSAAARRINLSQPAMSAAVARLRDYFGDELFTTSGRERFLTPRAAALAPAVRDALLQIQCSIISSDTFHPAQSDRRFRIILSDFATLVFFEKVVERVAREAPGVSFELLPVDDGPDELLQRGDVDFLILPDLFTSSAHSSVALFEERLVCVGCRTNKQLPRQLTFERYMSMRHVSVRFGRLMKPSIEEWFLLEHGLKRRVEVAVQGFSMVPPMVSGTARIATIPSRLVRHFEKSFPLQIVELPLPLPAFTETLCWPSLHNSDPASIWMREIMMQEASRMAPPLSNHGRLPGELTFGTPATP
SIO_010081: HB778_RS38185
subclass of: SO_0000673
so part of: HB778_RS38185
location: 82670..83641
location: region:82670-83641:1
so has part: feature:82670-83641:1:exon

WP_183465748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82670-83641:1:exon

HB778_RS38190
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38190
old locus tag: HB778_38330
so part of: sequence
location: complement(83638..84441)
location: region:83638-84441:-1
so has part: feature:83638-84441:-1:exon
subclass of: SO_0000010

position:83638:-1
position: 83638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84441:-1
position: 84441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83638-84441:-1:exon

HB778_RS38190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38190
old locus tag: HB778_38330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533525.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIM barrel protein
translation: MRQVSPRFAVNHMAAPPLDVSAFFALARDQGLTDVQIRDLHFSNPVACAIPAADVRSAATEAGVTIISVNALQRFNDWTPTRQSAAIKLADYAAACGAKTVVLEPVNDGSWACNGERHDSLRVALNALKPILQPRGLIGLIEPLGFRTCSLRSKKQAAEAIAAVDGQSVFRLVHDTFHHTLAGETFLFSELTGLVHISGVNDPTFWIYPDRFLGGSDNGSQIQALLDGGYEGPFSFELIEVVRTLDDLAGALAASIDFIQRRLLTPD
SIO_010081: HB778_RS38190
subclass of: SO_0000673
so part of: HB778_RS38190
location: complement(83638..84441)
location: region:83638-84441:-1
so has part: feature:83638-84441:-1:exon

WP_183455299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83638-84441:-1:exon

HB778_RS38195
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38195
old locus tag: HB778_38335
so part of: sequence
location: complement(84608..85639)
location: region:84608-85639:-1
so has part: feature:84608-85639:-1:exon
subclass of: SO_0000010

position:84608:-1
position: 84608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85639:-1
position: 85639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84608-85639:-1:exon

HB778_RS38195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38195
old locus tag: HB778_38335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015243257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MAKRPTIVDLAREAGVSVATVDRVLNARLPVREETARRVHEAAHAIGYHNAGLIKHRLKRHLPHYRLGFILRKPAQHFYQEFAREVEASVSLSQSFLGIPLIEFAPSHLPGDLIPLLKSLGNRCDAIAMVAPDHPKITAAVEELKAKGIPVFSLLSDFACGVREGYIGLNNRKVGRTAAWMFSKAAKRPGKVAVFVGSHRFQGHELREVAFRSYFRENAPTFEVLDTLVNLEERQITYEAMLDLIQREPELVGFYMAGGGMEGAISALREEGKGVDLVAIVNEITPESRAALADEIVTMAVATPLRRLCQELMLLIDRGIKTGTAEMPGETFLPFDIYVPENI
SIO_010081: HB778_RS38195
subclass of: SO_0000673
so part of: HB778_RS38195
location: complement(84608..85639)
location: region:84608-85639:-1
so has part: feature:84608-85639:-1:exon

WP_183455300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84608-85639:-1:exon

HB778_RS38200
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38200
old locus tag: HB778_38340
so part of: sequence
location: complement(85770..86726)
location: region:85770-86726:-1
so has part: feature:85770-86726:-1:exon
subclass of: SO_0000010

position:85770:-1
position: 85770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86726:-1
position: 86726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85770-86726:-1:exon

HB778_RS38200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38200
old locus tag: HB778_38340
EC number: 3.4.23.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008837404.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0004175 - endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: omptin family outer membrane protease
translation: MNRCTSFPILTFGAFCATSAVATAADQTIYAAPDRSVVFVGGVGYTWLKGNELFYDDEGNVVSKLIWETDAPVLTTSLKAEVWNNWTISANAVFGFPGNSHMEDYDWSDLAPSFAEGDWSHRSIHPDTDLVHYINFDIAAGRDFAINDATTINLHGGFKYTNVKWNAFGGPYTYSKYAFRDSVGNFPDRQLGSSYEQRYPGLFLGAEAATTLGNWTLSGLLRSGFTVDASDVDHHWVRGLRFEADLDTVPFISVGAKTGYQMTDRASFFLAGNFDKYFHEKGDRAVYDIATGKRGTEEFVAGIDFYALTLSASFKLTF
SIO_010081: HB778_RS38200
subclass of: SO_0000673
so part of: HB778_RS38200
location: complement(85770..86726)
location: region:85770-86726:-1
so has part: feature:85770-86726:-1:exon

WP_183465749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85770-86726:-1:exon

HB778_RS38205
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38205
old locus tag: HB778_38345
so part of: sequence
location: complement(86730..86933)
location: region:86730-86933:-1
so has part: feature:86730-86933:-1:exon
subclass of: SO_0000010

position:86730:-1
position: 86730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86933:-1
position: 86933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86730-86933:-1:exon

HB778_RS38205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38205
old locus tag: HB778_38345
inference: COORDINATES: protein motif:HMM:NF025051.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PepSY domain-containing protein
translation: MEISALFLNVTAVGPALAGGKWDVPIAKSQSREALQTKPEADGRQIRSIKDQEDGCHTAYAVGSKEG
SIO_010081: HB778_RS38205
subclass of: SO_0000673
so part of: HB778_RS38205
location: complement(86730..86933)
location: region:86730-86933:-1
so has part: feature:86730-86933:-1:exon

WP_183455302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86730-86933:-1:exon

HB778_RS38210
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38210
old locus tag: HB778_38350
pseudo: true
so part of: sequence
location: complement(87039..>87589)
location: region:87039-87589:-1
so has part: feature:87039-87589:-1:exon
subclass of: SO_0000010

position:87039:-1
position: 87039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87589:-1
position: 87589
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87039-87589:-1:exon

HB778_RS38210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38210
old locus tag: HB778_38350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018648293.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: coproporphyrinogen III oxidase
SIO_010081: HB778_RS38210
subclass of: SO_0000673
so part of: HB778_RS38210
location: complement(87039..>87589)
location: region:87039-87589:-1
so has part: feature:87039-87589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87039-87589:-1:exon

HB778_RS38215
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38215
old locus tag: HB778_38355
pseudo: true
so part of: sequence
location: <87591..87791
location: region:87591-87791:1
so has part: feature:87591-87791:1:exon
subclass of: SO_0000010

position:87591:1
position: 87591
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:87791:1
position: 87791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87591-87791:1:exon

HB778_RS38215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38215
old locus tag: HB778_38355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015934039.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: HB778_RS38215
subclass of: SO_0000673
so part of: HB778_RS38215
location: <87591..87791
location: region:87591-87791:1
so has part: feature:87591-87791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87591-87791:1:exon

HB778_RS42360
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42360
so part of: sequence
location: complement(88193..88345)
location: region:88193-88345:-1
so has part: feature:88193-88345:-1:exon
subclass of: SO_0000010

position:88193:-1
position: 88193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88345:-1
position: 88345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88193-88345:-1:exon

HB778_RS42360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESAGSAVHPIPSAECARQNANVVTVAIAREMVGFIWSIACTVQAAPKAA
SIO_010081: HB778_RS42360
subclass of: SO_0000673
so part of: HB778_RS42360
location: complement(88193..88345)
location: region:88193-88345:-1
so has part: feature:88193-88345:-1:exon

WP_244662219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88193-88345:-1:exon

HB778_RS42365
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42365
pseudo: true
so part of: sequence
location: complement(<88468..88599)
location: region:88468-88599:-1
so has part: feature:88468-88599:-1:exon
subclass of: SO_0000010

position:88468:-1
position: 88468
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:88599:-1
position: 88599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88468-88599:-1:exon

HB778_RS42365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42365
inference: COORDINATES: protein motif:HMM:NF014430.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS42365
subclass of: SO_0000673
so part of: HB778_RS42365
location: complement(<88468..88599)
location: region:88468-88599:-1
so has part: feature:88468-88599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88468-88599:-1:exon

HB778_RS42370
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42370
so part of: sequence
location: 88541..88711
location: region:88541-88711:1
so has part: feature:88541-88711:1:exon
subclass of: SO_0000010

position:88541:1
position: 88541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88711:1
position: 88711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88541-88711:1:exon

HB778_RS42370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSWRGLEKRVKSPTSATSTTALISAMPHCLQGINDRALVPFWEQAEYLFLGRCHVV
SIO_010081: HB778_RS42370
subclass of: SO_0000673
so part of: HB778_RS42370
location: 88541..88711
location: region:88541-88711:1
so has part: feature:88541-88711:1:exon

WP_183455496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88541-88711:1:exon

HB778_RS38225
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38225
old locus tag: HB778_38365
pseudo: true
so part of: sequence
location: complement(88744..>89211)
location: region:88744-89211:-1
so has part: feature:88744-89211:-1:exon
subclass of: SO_0000010

position:88744:-1
position: 88744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89211:-1
position: 89211
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88744-89211:-1:exon

HB778_RS38225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38225
old locus tag: HB778_38365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611992.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS38225
subclass of: SO_0000673
so part of: HB778_RS38225
location: complement(88744..>89211)
location: region:88744-89211:-1
so has part: feature:88744-89211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88744-89211:-1:exon

HB778_RS38230
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38230
old locus tag: HB778_38370
pseudo: true
so part of: sequence
location: 89247..>90225
location: region:89247-90225:1
so has part: feature:89247-90225:1:exon
subclass of: SO_0000010

position:89247:1
position: 89247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90225:1
position: 90225
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89247-90225:1:exon

HB778_RS38230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38230
old locus tag: HB778_38370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018390456.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: fumarate reductase/succinate dehydrogenase flavoprotein subunit
SIO_010081: HB778_RS38230
subclass of: SO_0000673
so part of: HB778_RS38230
location: 89247..>90225
location: region:89247-90225:1
so has part: feature:89247-90225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89247-90225:1:exon

HB778_RS42380
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42380
so part of: sequence
location: complement(90286..90609)
location: region:90286-90609:-1
so has part: feature:90286-90609:-1:exon
subclass of: SO_0000010

position:90286:-1
position: 90286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90609:-1
position: 90609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90286-90609:-1:exon

HB778_RS42380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42380
inference: COORDINATES: protein motif:HMM:NF024997.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDARTASSSTAVRPIVRQSFPAILKAVCGSDHTNHRSISARANTSRIEQDHRRIKRRVRSMLGFKSMENAQITLSGIELVHMMRKRQARFAYNPSPSIAEQFEMLTA
SIO_010081: HB778_RS42380
subclass of: SO_0000673
so part of: HB778_RS42380
location: complement(90286..90609)
location: region:90286-90609:-1
so has part: feature:90286-90609:-1:exon

WP_244662109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90286-90609:-1:exon

HB778_RS42385
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42385
pseudo: true
so part of: sequence
location: complement(<90581..90973)
location: region:90581-90973:-1
so has part: feature:90581-90973:-1:exon
subclass of: SO_0000010

position:90581:-1
position: 90581
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:90973:-1
position: 90973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90581-90973:-1:exon

HB778_RS42385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42385
inference: COORDINATES: protein motif:HMM:NF033587.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS42385
subclass of: SO_0000673
so part of: HB778_RS42385
location: complement(<90581..90973)
location: region:90581-90973:-1
so has part: feature:90581-90973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90581-90973:-1:exon

HB778_RS38240
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: cysQ
locus tag: HB778_RS38240
old locus tag: HB778_38380
pseudo: true
so part of: sequence
location: <91041..91765
location: region:91041-91765:1
so has part: feature:91041-91765:1:exon
subclass of: SO_0000010

position:91041:1
position: 91041
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:91765:1
position: 91765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91041-91765:1:exon

HB778_RS38240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: cysQ
locus tag: HB778_RS38240
old locus tag: HB778_38380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008840710.1
GO function: GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]
GO process: GO:0006790 - sulfur compound metabolic process [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3'(2'),5'-bisphosphate nucleotidase CysQ
SIO_010081: HB778_RS38240
subclass of: SO_0000673
so part of: HB778_RS38240
location: <91041..91765
location: region:91041-91765:1
so has part: feature:91041-91765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91041-91765:1:exon

HB778_RS38245
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38245
old locus tag: HB778_38385
so part of: sequence
location: 92004..92888
location: region:92004-92888:1
so has part: feature:92004-92888:1:exon
subclass of: SO_0000010

position:92004:1
position: 92004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92888:1
position: 92888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92004-92888:1:exon

HB778_RS38245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38245
old locus tag: HB778_38385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015317910.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldose 1-epimerase family protein
translation: MPQDSQTLHGDGISAVIVGQGAELVSLQDAQGFEFLWQAGPAWRRHSPLLFPIVGRLKGDQLRHRGQTYTMKQHGFARDKPFVWADRGPRSCTLVLTDDADSRAHYPFAFRLAVTYTLERQQLGVTFEVTNIGDELLPASIGAHPAFNWPLLSELPKEAYHLTFADDEPAPVPRLSDGLLLAAPRPTPIEGRTLALSERLFDDDAVILDRPASTSVRYAAERGPAIEVSWQGFSELGIWSKPGGAPFLCFEPWHGIASPVDFDGNFIDKPGLMLVAPGAKRSLNYEIRLEQGPW
SIO_010081: HB778_RS38245
subclass of: SO_0000673
so part of: HB778_RS38245
location: 92004..92888
location: region:92004-92888:1
so has part: feature:92004-92888:1:exon

WP_183465751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92004-92888:1:exon

HB778_RS38250
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38250
old locus tag: HB778_38390
pseudo: true
so part of: sequence
location: 93286..>93789
location: region:93286-93789:1
so has part: feature:93286-93789:1:exon
subclass of: SO_0000010

position:93286:1
position: 93286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93789:1
position: 93789
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93286-93789:1:exon

HB778_RS38250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38250
old locus tag: HB778_38390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006329070.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS38250
subclass of: SO_0000673
so part of: HB778_RS38250
location: 93286..>93789
location: region:93286-93789:1
so has part: feature:93286-93789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93286-93789:1:exon

HB778_RS38255
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38255
so part of: sequence
location: complement(94063..95286)
location: region:94063-95286:-1
so has part: feature:94063-95286:-1:exon
subclass of: SO_0000010

position:94063:-1
position: 94063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95286:-1
position: 95286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94063-95286:-1:exon

HB778_RS38255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011488086.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MEEDDQKLLVRLVGRNGRRRYDPASKDRLVSACLEPSVSVSRLALEHGVNANLLRKWIKKGTETQSRVVIANPILVRAIAWAKVKTDKIDAAVLAKLHASGFLPEVWMPDEETETRRRVVAERTQLVSQMTRLKNRIHSVLHANLIPPYKGTLFSKRGRAWLEAQPLAEDQRRVVLRHAGELDRLGGELAQVDKSLAQTALQEPRVKRLMTITGVNVTVALSIVAAIGDVERFSSPEKLVSYFGLNPRVRQSGDKPAYHGRITKQGRAHARSMLVEAAWVISGVPGPLRAFFMRIRDKRGKHVAAVATARKLAVIVWHMLTKDENYIWSRSALLDWKLRKLELTAGYPSHRGGRAKESAADYSNKSVRESERETIGNAEEVYRRFVATWKQQSPKGRSGAAHEVRRS
SIO_010081: HB778_RS38255
subclass of: SO_0000673
so part of: HB778_RS38255
location: complement(94063..95286)
location: region:94063-95286:-1
so has part: feature:94063-95286:-1:exon

WP_183465752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94063-95286:-1:exon

HB778_RS38260
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38260
old locus tag: HB778_38400
pseudo: true
so part of: sequence
location: 95785..96490
location: region:95785-96490:1
so has part: feature:95785-96490:1:exon
subclass of: SO_0000010

position:95785:1
position: 95785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96490:1
position: 96490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95785-96490:1:exon

HB778_RS38260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38260
old locus tag: HB778_38400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654560.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS38260
subclass of: SO_0000673
so part of: HB778_RS38260
location: 95785..96490
location: region:95785-96490:1
so has part: feature:95785-96490:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95785-96490:1:exon

HB778_RS38265
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38265
old locus tag: HB778_38405
so part of: sequence
location: complement(96716..98074)
location: region:96716-98074:-1
so has part: feature:96716-98074:-1:exon
subclass of: SO_0000010

position:96716:-1
position: 96716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98074:-1
position: 98074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96716-98074:-1:exon

HB778_RS38265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38265
old locus tag: HB778_38405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006205083.1
GO function: GO:0015293 - symporter activity [Evidence IEA]
GO process: GO:0006835 - dicarboxylic acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dicarboxylate/amino acid:cation symporter
translation: MLAPEIRSANAGPHKPHFARLYVQVLAAIALGVALGYFYPEIGESVKPLGDAFIKLVKMVIAPVIFLTIATGIAGMNDLQKLGRVAGKAMFYFLTFSTLALIVGLIVANVVQPGAGLNIDPASLDAQAVSTYAAKAHQQSVIGFLMNIIPSTVVGAFAEGDILQVLFFSVLFGIALAKGGETGKPVLSLLQALIAPVFKLVGILMKAAPIGAFGAMAFTIGKYGIGSMVNLAMLVATFYLTAFLFVFGVLGAVCRYNGFSIFSLIRYIKEELLLVLATSSSEAALPSLMEKIERAGAKRSVVGLVIPAGYSFNLDGTNIYMTLAALFIAQATNTDLSIVDQVLLLLVAMLSSKGSAGVTGAGFITLAATLAVVPSVPVAGLALILGVDRFMSECRALTNLVGNAVAALVIARWEGELDKAQLEAAFSGHQLAETLNRPIDRAPSAPAKWPGP
SIO_010081: HB778_RS38265
subclass of: SO_0000673
so part of: HB778_RS38265
location: complement(96716..98074)
location: region:96716-98074:-1
so has part: feature:96716-98074:-1:exon

WP_183455305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96716-98074:-1:exon

HB778_RS38270
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38270
old locus tag: HB778_38410
so part of: sequence
location: 98442..98867
location: region:98442-98867:1
so has part: feature:98442-98867:1:exon
subclass of: SO_0000010

position:98442:1
position: 98442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98867:1
position: 98867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98442-98867:1:exon

HB778_RS38270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38270
old locus tag: HB778_38410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQQKRPFVVEIKQKRGLVKRPQSIWGGIDLATISSEVAEAKTEDAIAEATPQPIFPGEDVRSEPMLAIGEAESDVKHVITPDAALPEPPTVEEAPVPEASNAPGGDRQTRRKKRWQDDVPLPRGERWKRRLPWVLRQRRR
SIO_010081: HB778_RS38270
subclass of: SO_0000673
so part of: HB778_RS38270
location: 98442..98867
location: region:98442-98867:1
so has part: feature:98442-98867:1:exon

WP_183465753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98442-98867:1:exon

HB778_RS42390
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42390
so part of: sequence
location: complement(99250..99363)
location: region:99250-99363:-1
so has part: feature:99250-99363:-1:exon
subclass of: SO_0000010

position:99250:-1
position: 99250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99363:-1
position: 99363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99250-99363:-1:exon

HB778_RS42390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42390
inference: COORDINATES: protein motif:HMM:NF015690.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF309 domain-containing protein
translation: MGYRPFQRRYYWEAHEAWEPIWHAAKKALSIACSSRD
SIO_010081: HB778_RS42390
subclass of: SO_0000673
so part of: HB778_RS42390
location: complement(99250..99363)
location: region:99250-99363:-1
so has part: feature:99250-99363:-1:exon

WP_244662174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99250-99363:-1:exon

HB778_RS38280
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38280
old locus tag: HB778_38420
so part of: sequence
location: 99980..100429
location: region:99980-100429:1
so has part: feature:99980-100429:1:exon
subclass of: SO_0000010

position:99980:1
position: 99980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100429:1
position: 100429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99980-100429:1:exon

HB778_RS38280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38280
old locus tag: HB778_38420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014761245.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MEDDEQKLLVRRILRNGRRRYDAASKERLVAACLEPGVSVSGLALEHGINANLLRKWIKTTKDAVALPPPAPSAFIPVQVSAAEYSLPMQGNSVERPATRGEERLSKSSPLPAKVSASLPNGVKLTLECGDVDALTAIIGALGHVQTGR
SIO_010081: HB778_RS38280
subclass of: SO_0000673
so part of: HB778_RS38280
location: 99980..100429
location: region:99980-100429:1
so has part: feature:99980-100429:1:exon

WP_183455045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99980-100429:1:exon

HB778_RS38290
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38290
old locus tag: HB778_38430
so part of: sequence
location: 100886..101074
location: region:100886-101074:1
so has part: feature:100886-101074:1:exon
subclass of: SO_0000010

position:100886:1
position: 100886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101074:1
position: 101074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100886-101074:1:exon

HB778_RS38290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38290
old locus tag: HB778_38430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017266728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNRRHQNRDQLVLELERQNRQVPVVKNVKGLVETLADLLLEALEASKTAKTGGVDEHEDHV
SIO_010081: HB778_RS38290
subclass of: SO_0000673
so part of: HB778_RS38290
location: 100886..101074
location: region:100886-101074:1
so has part: feature:100886-101074:1:exon

WP_183465755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100886-101074:1:exon

HB778_RS38295
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38295
old locus tag: HB778_38435
so part of: sequence
location: 101052..103142
location: region:101052-103142:1
so has part: feature:101052-103142:1:exon
subclass of: SO_0000010

position:101052:1
position: 101052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103142:1
position: 103142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101052-103142:1:exon

HB778_RS38295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38295
old locus tag: HB778_38435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012975328.1
GO function: GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MNTKITSDHLGRAAVVYVRQSTMAQVMGNLESQRRQYDLAGAAATTGFASVTVIDDDLGRSGSGSVERPGFERLVALVCSGNVGAVYCIEASRLARNGRDWHHLIDLCALTGTLVIDPDGAFDPRLVNDRLLLGLKGTMAEYELSLIRQRGIAARDSKAGRGEFRFMLPPGFCWSEAGKIEIDPDEHVAETIRLVFDKFRELGSGRQVFLWLRSADIKMPVVLHNVEVRKLVWKAPAYHSVMQILHNPLYAGAYAFGRRAQRTLIIDGRARKANGLRKPRDEWSVLLRDNHQGYITWREYEENQKLLTENAHMKRNCDRKSARGGRALLTGLMRCGRCGRMMRVFYGSAKGNAHRYQCRGDDARVGLGLCIGIGGVRVDRAVATQILEAVSDRAVEAAIFASDQVERSARDVIAAIERDLEGARYEASLAGRRYELVDPAKRHVARELEARWNDALERVSVLERKIEELSALSAARPAIDRGRLLQLAHDLPTAWNAPSTDTRTKQRLIHILVQEIICDLDDTTNEAVLLIHWTGGRHTEVRVARVKTGRYPSDMAPPAVEALRKLGGHWPDRELAVSLNRMLCKTGDGEGWTAVRVRDMRERLGIPEYDPTKAGSPVISLMKAAERLGICIGSAKSLVKKGILPATQILPGSQWMVPIEALTSEAVLIGVQGVVGRRPQIYEYYQYDKVVRLPGL
SIO_010081: HB778_RS38295
subclass of: SO_0000673
so part of: HB778_RS38295
location: 101052..103142
location: region:101052-103142:1
so has part: feature:101052-103142:1:exon

WP_183465756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101052-103142:1:exon

HB778_RS38300
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS38300
old locus tag: HB778_38440
so part of: sequence
location: 103180..103374
location: region:103180-103374:1
so has part: feature:103180-103374:1:exon
subclass of: SO_0000010

position:103180:1
position: 103180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103374:1
position: 103374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103180-103374:1:exon

HB778_RS38300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS38300
old locus tag: HB778_38440
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MKLLFFDRSGFVLVLKRLTEDKFRWPRRETAVVTLTTEQLHWILDGIDIDAMVRHPVRQYQVAG
SIO_010081: HB778_RS38300
subclass of: SO_0000673
so part of: HB778_RS38300
location: 103180..103374
location: region:103180-103374:1
so has part: feature:103180-103374:1:exon

WP_183459725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103180-103374:1:exon

HB778_RS38305
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38305
old locus tag: HB778_38445
pseudo: true
so part of: sequence
location: 103429..>104230
location: region:103429-104230:1
so has part: feature:103429-104230:1:exon
subclass of: SO_0000010

position:103429:1
position: 103429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104230:1
position: 104230
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103429-104230:1:exon

HB778_RS38305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38305
old locus tag: HB778_38445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_028755357.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS38305
subclass of: SO_0000673
so part of: HB778_RS38305
location: 103429..>104230
location: region:103429-104230:1
so has part: feature:103429-104230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103429-104230:1:exon

HB778_RS38310
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38310
old locus tag: HB778_38450
so part of: sequence
location: complement(104310..105881)
location: region:104310-105881:-1
so has part: feature:104310-105881:-1:exon
subclass of: SO_0000010

position:104310:-1
position: 104310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105881:-1
position: 105881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104310-105881:-1:exon

HB778_RS38310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38310
old locus tag: HB778_38450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989244.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MNRPGEPTVEELMARIAALQAQNRQLAERVAKLEEELALARLHRFAPKSEKHVDRLFNEAEQIADEDDAGSEDGNVVDLPDTGFPSTEKPEGKKRGRKPLPEHLPRERVEYDLADGQKACPCCRHQMHRMGEAVTEQLHIEVKAKVLQNVRFKYACRHCDRTGINTPVVIAPMPAQPLPGSIATASTLAFALVHKYVDGTPLYRLAQAFERAGVPVSRGALGHWVIGSSERHLSRIYDALKLRLRSQPLIHGDETTVQVLKEKDREATSTSFMWAYRSGEDSDEPIVLLDYQPGRGQIYPQAFLGDYRGILMSDGYTAWRTLAGATHLGCMAHSRRRFVDALKTRKKGGGPPEQALKFFEKLYRIESQTRNEKPDKGETRHQCIRRFRQQHSVPIMNALKAWLDDIAPKVLPDSKIGDAVSYTLNQWEYLTRYTEDGRMPIDNNLLERDIRIFATGRKSWLFSDTVDGARASAVVYSLMLTCRACGIEPLAYLRHVLTELPQRADNADITDLLPFNFAKTAAT
SIO_010081: HB778_RS38310
subclass of: SO_0000673
so part of: HB778_RS38310
location: complement(104310..105881)
location: region:104310-105881:-1
so has part: feature:104310-105881:-1:exon

WP_183454979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104310-105881:-1:exon

HB778_RS38315
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS38315
old locus tag: HB778_38455
so part of: sequence
location: complement(105936..106289)
location: region:105936-106289:-1
so has part: feature:105936-106289:-1:exon
subclass of: SO_0000010

position:105936:-1
position: 105936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106289:-1
position: 106289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105936-106289:-1:exon

HB778_RS38315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS38315
old locus tag: HB778_38455
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MFRLGADLTVYLHREPIDFRAGINSLAVLVQEVMELDPFAPAVFAFCNRRRDRMKLLFFDRSGFVLVLKRLTEDKFRWPRRETAVVTLTTEQLHWILDGIDIDAMVRHPVRQYQVAG
SIO_010081: HB778_RS38315
subclass of: SO_0000673
so part of: HB778_RS38315
location: complement(105936..106289)
location: region:105936-106289:-1
so has part: feature:105936-106289:-1:exon

WP_183454978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105936-106289:-1:exon

HB778_RS38320
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38320
old locus tag: HB778_38460
so part of: sequence
location: complement(106270..106719)
location: region:106270-106719:-1
so has part: feature:106270-106719:-1:exon
subclass of: SO_0000010

position:106270:-1
position: 106270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106719:-1
position: 106719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106270-106719:-1:exon

HB778_RS38320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38320
old locus tag: HB778_38460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014761245.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MEDDEQKLLVRRILRNGRRRYDAASKERLVAACLEPGVSVSGLALEHGINANLLRKWIKTTKDAVALPPPAPSAFIPVQVSAAEYSLPMQGNSVERPATRGEERLSKSSPLPAKVSASLPNGVKLTLECGDVDALTAIIGALGHVQTGR
SIO_010081: HB778_RS38320
subclass of: SO_0000673
so part of: HB778_RS38320
location: complement(106270..106719)
location: region:106270-106719:-1
so has part: feature:106270-106719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106270-106719:-1:exon

HB778_RS38325
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38325
old locus tag: HB778_38465
pseudo: true
so part of: sequence
location: <106801..107567
location: region:106801-107567:1
so has part: feature:106801-107567:1:exon
subclass of: SO_0000010

position:106801:1
position: 106801
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:107567:1
position: 107567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106801-107567:1:exon

HB778_RS38325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38325
old locus tag: HB778_38465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989244.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: HB778_RS38325
subclass of: SO_0000673
so part of: HB778_RS38325
location: <106801..107567
location: region:106801-107567:1
so has part: feature:106801-107567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106801-107567:1:exon

HB778_RS38330
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38330
old locus tag: HB778_38470
so part of: sequence
location: 107572..107886
location: region:107572-107886:1
so has part: feature:107572-107886:1:exon
subclass of: SO_0000010

position:107572:1
position: 107572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107886:1
position: 107886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107572-107886:1:exon

HB778_RS38330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38330
old locus tag: HB778_38470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLADNDPGQTGRVNAHGNERLLPGGQFCYQKCGVSVYGCASKVSVLLHHYYRRAGFAIANRSHPLDPGIAVDANIEQNRPCGFFCGVSHTITEGSIEALDIPE
SIO_010081: HB778_RS38330
subclass of: SO_0000673
so part of: HB778_RS38330
location: 107572..107886
location: region:107572-107886:1
so has part: feature:107572-107886:1:exon

WP_183465757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107572-107886:1:exon

HB778_RS43000
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS43000
old locus tag: HB778_38475
so part of: sequence
location: complement(108096..108908)
location: region:108096-108908:-1
so has part: feature:108096-108908:-1:exon
subclass of: SO_0000010

position:108096:-1
position: 108096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108908:-1
position: 108908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108096-108908:-1:exon

HB778_RS43000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS43000
old locus tag: HB778_38475
inference: COORDINATES: protein motif:HMM:NF012534.2
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MGNYRDHREPRGHRHDDDPVSFSERTSEPSYFQRPATVTVHPVDAEVLWFTVSKGFGFVKLSDGTEAYLHVRVLEAAGSRDVAEGTLLKVTVEKSPKGHQVAQVLEIGDEIANTPSHTRVAGGTMVETGAQLESGGTVKWYKPEKGFGFQAPDNGEKDVFVHASTLTRSGLSVLVEGQKVFVECGQGKKGLEVRSIRPRLRIATARTKILQYTIYGLVSTPDARELVAKSLEDVSRCVSRCPRAPICLLPIRETELPRSRAVSRRDCRGP
SIO_010081: HB778_RS43000
subclass of: SO_0000673
so part of: HB778_RS43000
location: complement(108096..108908)
location: region:108096-108908:-1
so has part: feature:108096-108908:-1:exon

WP_280515989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108096-108908:-1:exon

HB778_RS38340
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38340
old locus tag: HB778_38480
so part of: sequence
location: complement(110165..110761)
location: region:110165-110761:-1
so has part: feature:110165-110761:-1:exon
subclass of: SO_0000010

position:110165:-1
position: 110165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110761:-1
position: 110761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110165-110761:-1:exon

HB778_RS38340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38340
old locus tag: HB778_38480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872025.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MVFRLKERLGRKFEEEVQFFKGWQKDKKRVGALMPTSVHAARRMASVINPASGLPVLELGAGTGVITKAILERGIKPHQLISVEYSKDFYHRLTRGFPGVDFRLGDAFALGEVLAERSGEQFDCVISAVPMLSFPMEQRIALLEDLLARIPAGRPVIQITYGPLSPVIKMPDRYVVSHYDFVVRNIPPAQLWTYRRAV
SIO_010081: HB778_RS38340
subclass of: SO_0000673
so part of: HB778_RS38340
location: complement(110165..110761)
location: region:110165-110761:-1
so has part: feature:110165-110761:-1:exon

WP_183455309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110165-110761:-1:exon

HB778_RS38345
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38345
old locus tag: HB778_38485
so part of: sequence
location: complement(111197..112825)
location: region:111197-112825:-1
so has part: feature:111197-112825:-1:exon
subclass of: SO_0000010

position:111197:-1
position: 111197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112825:-1
position: 112825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111197-112825:-1:exon

HB778_RS38345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38345
old locus tag: HB778_38485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006199601.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MRNAFLFGTWWGALPVLFFSGATSAAQVVITCLSAGMIAGGAASFSTIPIAAVAYTLPIFVGSAVAIVWVGDAVNLPVAILIVSYAITLFRAVLAHAFEFTQRFILQAESENAIRRDILTSLPNRFSFNERLDSALVDARQFDQHFALLLFDLNNFDEVNDRFGRAIADVLLVEVAARLRKSTRESDGIARLEGDEFAIIATRDIRPDQIGSLAKQIIDAVRAPFLIEGREIYCRASIGIALAPTDGLDANQLLRCVDTALYRAKTLGAGSIQFFSGSDDEAAARRHALERDLASALANGQLSLAFQPFLDLSSDRIRGFEALLRWHHPTLGAIPPSEFISIAEETGLIHSIGHWVVKTACLAAARWPHDLRVSVNLSVVQLKNKALLDGIVVALAEAGLEPRRLEVEITETVLISNFEETISLLQSLGSLSVTVALDDFGTGYSSLTYLRKLPLSRLKIDRSFVQDMLTDADCAAIVRSLVELAHELRIEVTAEGVETPEQLDYLRRVRCDEAQGYLIGKPVGIGDIPGIAAKQFGQELGV
SIO_010081: HB778_RS38345
subclass of: SO_0000673
so part of: HB778_RS38345
location: complement(111197..112825)
location: region:111197-112825:-1
so has part: feature:111197-112825:-1:exon

WP_244662175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111197-112825:-1:exon

HB778_RS38350
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38350
old locus tag: HB778_38490
so part of: sequence
location: complement(113192..114138)
location: region:113192-114138:-1
so has part: feature:113192-114138:-1:exon
subclass of: SO_0000010

position:113192:-1
position: 113192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114138:-1
position: 114138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113192-114138:-1:exon

HB778_RS38350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38350
old locus tag: HB778_38490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611376.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MTRSLSADLRGRVILAISEGVSTREAARRFRIGIATAGNWYRRYRETGEMAARKQGQPSRSKLDPHEAFILGLIEETPDITLAEIAERLAAGHGVRVVPSTIWMFLDRRCVTFKKKTAHASEQQRPDVKARRCAWFDGQLDLDPEKLIFIDETAASTKMARLRGRAKCGERCRAPVPHGHWKTTTFTAGLRLNGLTAPMLLDGPMNGAAFLAYAEQVLAPELSPGDIVVMDNLPAHKITGVREAIQRTGARLLLLPPYSPDFNPIEMAFSKLKALLRKAAARSIDQLWSVIADCLDAFKPAECRNYFEAAGYDPE
SIO_010081: HB778_RS38350
subclass of: SO_0000673
so part of: HB778_RS38350
location: complement(join(113192..113799,113799..114138))
location: region:113192-114138:-1
so has part: feature:113799-114138:-1:exon
so has part: feature:113192-113799:-1:exon

WP_183465598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113799-114138:-1:exon

position:113799:-1
position: 113799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113192-113799:-1:exon

HB778_RS38355
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38355
old locus tag: HB778_38495
so part of: sequence
location: complement(114481..116901)
location: region:114481-116901:-1
so has part: feature:114481-116901:-1:exon
subclass of: SO_0000010

position:114481:-1
position: 114481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116901:-1
position: 116901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114481-116901:-1:exon

HB778_RS38355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38355
old locus tag: HB778_38495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015930069.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MLKVYTCIATQHDLRLVALAALICALASFTAVNLLHHVGRSESEMRRIWLAVAAVATGFGIWATHFIAMLAFQPAVPSGYNIALTIMSLLAAIALTGTGLTISTSPRVPHGRWIGGAIVGGGIAVMHYTGMAAFEIAGRVVWDVPLVAASIILGGLFGAAALPVALHANTVKWKALGALVLTVAICSHHFTAMGAAAIMPDPRIVISATALPADWMAAGVALVSIVIILLAIIGLALDVRDLRRAGEAARMQELADAAVEGLIVCNETEIVAANRSFAALACVDGSQPAGRPLASFFPTVSQGELSGTTQTPLEVGLCATDGSTVPVELIRHSILYAGKQHQVLAVRDIRGRKRAEEEIHFLAHHDPLTKLPNRTSFNEKLEAEFTTHRGAERCLAVLFLDLDRFKEINDLFGHLVGDAVLQCVAEKIRGVLKPGQMVARLGGDEFAVIVPGLPSAGYATRTAEAILDALNDTGANLPAGVTIGTSIGIAVFPNDAPDRETLLSHADAALYEAKMQGRGLYCVFEPSMGEHLRDRRQFEHDIRHAISRKELRLVYQPQAELLSNKVFGFEALLRWDHPERGAVPPAVFIPIAEECGAILKIGEWVLRTACAEAASWQQPLAISVNVSAMQLHGGNLPELVGAVLKETGLDPFRLELEITETCLIKDIGRALSALRQLKSLGVQIAMDDFGTGYSSLSNLRAFPFDKIKVDQSLVRAVDTSDEAAAVMRAVFGLARGLKLPVLAEGVETDAELTFLRQEACDAIQGYLLGRPCPISDFAQHTSGKGLTPASRRLSNHELRVVKNSAA
SIO_010081: HB778_RS38355
subclass of: SO_0000673
so part of: HB778_RS38355
location: complement(114481..116901)
location: region:114481-116901:-1
so has part: feature:114481-116901:-1:exon

WP_183465759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114481-116901:-1:exon

HB778_RS38360
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38360
old locus tag: HB778_38500
pseudo: true
so part of: sequence
location: 117434..119084
location: region:117434-119084:1
so has part: feature:117434-119084:1:exon
subclass of: SO_0000010

position:117434:1
position: 117434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119084:1
position: 119084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117434-119084:1:exon

HB778_RS38360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38360
old locus tag: HB778_38500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019856508.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: HB778_RS38360
subclass of: SO_0000673
so part of: HB778_RS38360
location: 117434..119084
location: region:117434-119084:1
so has part: feature:117434-119084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117434-119084:1:exon

HB778_RS38365
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38365
old locus tag: HB778_38505
so part of: sequence
location: 119124..119372
location: region:119124-119372:1
so has part: feature:119124-119372:1:exon
subclass of: SO_0000010

position:119124:1
position: 119124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119372:1
position: 119372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119124-119372:1:exon

HB778_RS38365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38365
old locus tag: HB778_38505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006328763.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF982 domain-containing protein
translation: MTGLVRFKRQVVVQIGRHSPERAVFDVNDAAAILLQVSGRQTEKRRAAMDACLKALRGKAHPPAARRAFVAAAREANILRGD
SIO_010081: HB778_RS38365
subclass of: SO_0000673
so part of: HB778_RS38365
location: 119124..119372
location: region:119124-119372:1
so has part: feature:119124-119372:1:exon

WP_183465760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119124-119372:1:exon

HB778_RS38370
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38370
old locus tag: HB778_38510
so part of: sequence
location: 119369..119803
location: region:119369-119803:1
so has part: feature:119369-119803:1:exon
subclass of: SO_0000010

position:119369:1
position: 119369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119803:1
position: 119803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119369-119803:1:exon

HB778_RS38370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38370
old locus tag: HB778_38510
EC number: 2.7.1.49
EC number: 2.7.4.7
inference: COORDINATES: protein motif:HMM:NF020132.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
translation: MTGQKSFDADRSGEKICKEPLWLTRMHRSTSSATPASSVKSSPEIRWYPISRVNAPLAAGPQALLIKGGHASGHRSTDVLLRFDQEPIRFDTPRLISSMRGTGCMLASAIAAHLANARSLQDSVREGKLFVFEKLRKHAAENSE
SIO_010081: HB778_RS38370
subclass of: SO_0000673
so part of: HB778_RS38370
location: 119369..119803
location: region:119369-119803:1
so has part: feature:119369-119803:1:exon

WP_244662176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119369-119803:1:exon

HB778_RS38375
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38375
old locus tag: HB778_38515
pseudo: true
so part of: sequence
location: complement(120478..121074)
location: region:120478-121074:-1
so has part: feature:120478-121074:-1:exon
subclass of: SO_0000010

position:120478:-1
position: 120478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121074:-1
position: 121074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120478-121074:-1:exon

HB778_RS38375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38375
old locus tag: HB778_38515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872025.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
SIO_010081: HB778_RS38375
subclass of: SO_0000673
so part of: HB778_RS38375
location: complement(120478..121074)
location: region:120478-121074:-1
so has part: feature:120478-121074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120478-121074:-1:exon

HB778_RS38380
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: panC
locus tag: HB778_RS38380
old locus tag: HB778_38520
so part of: sequence
location: complement(121150..122040)
location: region:121150-122040:-1
so has part: feature:121150-122040:-1:exon
subclass of: SO_0000010

position:121150:-1
position: 121150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122040:-1
position: 122040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121150-122040:-1:exon

HB778_RS38380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: panC
locus tag: HB778_RS38380
old locus tag: HB778_38520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533318.1
GO function: GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pantoate--beta-alanine ligase
translation: MIIPIARTVAELRMAVAGWRQKGLKVAVVPTIGALHEGHLSLVRTALAKADRVIVTLFVNPKQFNSAADLAAYPRTEHDDAAKLAPLGAHLLYAPNAADVYPEGFATTISVSGVSRGLCGAFRPGHFDGVATVVAKLFLQTRADLAFFGEKDFQQLHVVRRLVRDLEIPIEIVACPTVREADGLAMSSRNVRLSAEQRLAAPRLAEVLSTSAGRLSAGAPAELVLAEARQAIRAAGYDEVEYLELRADQDLSPLSAADRPARLIVAAWLGGTRLIDNVGVLPGQRKGELLAAANAA
SIO_010081: HB778_RS38380
subclass of: SO_0000673
so part of: HB778_RS38380
location: complement(121150..122040)
location: region:121150-122040:-1
so has part: feature:121150-122040:-1:exon

WP_183455316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121150-122040:-1:exon

HB778_RS38385
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38385
pseudo: true
so part of: sequence
location: complement(122037..>122297)
location: region:122037-122297:-1
so has part: feature:122037-122297:-1:exon
subclass of: SO_0000010

position:122037:-1
position: 122037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122297:-1
position: 122297
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122037-122297:-1:exon

HB778_RS38385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014130873.1
GO function: GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-methyl-2-oxobutanoate hydroxymethyltransferase
SIO_010081: HB778_RS38385
subclass of: SO_0000673
so part of: HB778_RS38385
location: complement(122037..>122297)
location: region:122037-122297:-1
so has part: feature:122037-122297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122037-122297:-1:exon

HB778_RS38390
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38390
pseudo: true
so part of: sequence
location: complement(<122298..122531)
location: region:122298-122531:-1
so has part: feature:122298-122531:-1:exon
subclass of: SO_0000010

position:122298:-1
position: 122298
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:122531:-1
position: 122531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122298-122531:-1:exon

HB778_RS38390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012973088.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS38390
subclass of: SO_0000673
so part of: HB778_RS38390
location: complement(<122298..122531)
location: region:122298-122531:-1
so has part: feature:122298-122531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122298-122531:-1:exon

HB778_RS38395
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38395
old locus tag: HB778_38530
so part of: sequence
location: complement(122668..123378)
location: region:122668-123378:-1
so has part: feature:122668-123378:-1:exon
subclass of: SO_0000010

position:122668:-1
position: 122668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123378:-1
position: 123378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122668-123378:-1:exon

HB778_RS38395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38395
old locus tag: HB778_38530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEAFSASDAAWLSICNAPLGTWRMPRTAWPAVPKTSIRGLRFFAHAPGFTGQLPGPESYAHTRLKIDVVKAARAMGFRAELEAWGTDGAGAEWIADVLVFLADGRRVAFEVQLSSQHLDDFLTRTERYRRSGVTCCWIMSERPVAWRLTKALSYKNSQYRRETGEVLCDCEELVPFAIELAGKDAYPDVLPPVRFGRGRHIKRMALTEAVAGMLHGFPSWQLPDWHWKASQVSVD
SIO_010081: HB778_RS38395
subclass of: SO_0000673
so part of: HB778_RS38395
location: complement(122668..123378)
location: region:122668-123378:-1
so has part: feature:122668-123378:-1:exon

WP_183455317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122668-123378:-1:exon

HB778_RS38400
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38400
old locus tag: HB778_38535
so part of: sequence
location: complement(123885..125225)
location: region:123885-125225:-1
so has part: feature:123885-125225:-1:exon
subclass of: SO_0000010

position:123885:-1
position: 123885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125225:-1
position: 125225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123885-125225:-1:exon

HB778_RS38400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38400
old locus tag: HB778_38535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012977037.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MNDLTLPLSGLSSVGGKSVVARFNGGMLSSNCGVLVLAEVEKRLRVADRLARCIDDPRCPDQVVHSLADMIGFRMKMIAAGYEDGNDANRLRSDPVFKMAQDALPSGRDLASQSTICRLENLPGVRELVAMGRAMIDLYCASFRQVPKRIVLDIDDTFDAVHGGQQLRLFNAHHDEYGFQPIVVFDGAGRFVSAILRPAKRPSGAEIRPHLRRLVRAIRINWPNIRILLRGDSHYCSPQVIDWCRANDVDFIFGLAPTTTLRKHVADLEASTTARFEASAKTGKVRRFKEFVDGAASWSRVERIIARVEVGAQGADTRFVVTNLAGGKAKALYEDVYCRRGAAENHIKSWKTHLAADRTSCTRATANQFRLFLHAGAYWLMWGLRAAMPRRSSFAVAQFDTLRLRLIKIAARVVEMKSQIRLHLPTSCPDQRILRIVLDRIPQLAT
SIO_010081: HB778_RS38400
subclass of: SO_0000673
so part of: HB778_RS38400
location: complement(123885..125225)
location: region:123885-125225:-1
so has part: feature:123885-125225:-1:exon

WP_183465761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123885-125225:-1:exon

HB778_RS38405
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38405
old locus tag: HB778_38540
so part of: sequence
location: 125524..125769
location: region:125524-125769:1
so has part: feature:125524-125769:1:exon
subclass of: SO_0000010

position:125524:1
position: 125524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125769:1
position: 125769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125524-125769:1:exon

HB778_RS38405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38405
old locus tag: HB778_38540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875306.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family ribbon-helix-helix protein
translation: MTAFTVRVPDETADRLDQLAEKLDRSRSYVAAQAIEDFVAREEWQLAEIEAGLAEAQRGEFASDHDVAAVVGKYVKSARQS
SIO_010081: HB778_RS38405
subclass of: SO_0000673
so part of: HB778_RS38405
location: 125524..125769
location: region:125524-125769:1
so has part: feature:125524-125769:1:exon

WP_111545633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125524-125769:1:exon

HB778_RS38410
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38410
old locus tag: HB778_38545
so part of: sequence
location: 125766..126059
location: region:125766-126059:1
so has part: feature:125766-126059:1:exon
subclass of: SO_0000010

position:125766:1
position: 125766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126059:1
position: 126059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125766-126059:1:exon

HB778_RS38410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38410
old locus tag: HB778_38545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875305.1
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MSRKRIRWTQRALRRLDEIGAHIEKDSSDAAGRVVARIVSAAEHLAEQPAMGRIGRIKTTRELVLADIPYIIPYHVNGETVEILTVMHAAQQWPQAL
SIO_010081: HB778_RS38410
subclass of: SO_0000673
so part of: HB778_RS38410
location: 125766..126059
location: region:125766-126059:1
so has part: feature:125766-126059:1:exon

WP_183455318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125766-126059:1:exon

HB778_RS38415
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38415
old locus tag: HB778_38550
so part of: sequence
location: 127073..128701
location: region:127073-128701:1
so has part: feature:127073-128701:1:exon
subclass of: SO_0000010

position:127073:1
position: 127073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128701:1
position: 128701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127073-128701:1:exon

HB778_RS38415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38415
old locus tag: HB778_38550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838287.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: MFVVERVARGHRYLYLVESVRDGKTVRQRTIKALGRKDALVASGELDRLAASIARHGERSLILSDIDAGRIASRRIGGPLLFGRLWERLGIGEVLEEVLEGRQFGFAVERAVFVGTLHRLFVSGSDRDCANWMADYGIEGAEGLALHHFYRAMAWLGEELGEKAQGALVARCVKDAIEEKLFARRQDLFTDLSLVFMDTTSLSFHGAGGETLGKRGHSKDFRPDLAQMILALVVDAEGRPICTEMVPGNTADVTVLLPVVDRLRTRFGVTRACVVADRGMISADTIAALEKLGMEYILGARERSSSVIHNVVLNDAAPMVPLVLERQRGETQLWVKEVKVGKDRYIVSRNDAEAEKDKADRQAIIAGLEAQLKKGDKALVGNSAYRRYLKASGKNFKIDVGKLAEEARYDGITVVRTNAKVTPLQAVLRYRDLLEVESLFRAAKATFNTRPIFHQSDAAIRGHVFCSFLGLVLSKELYRLCRAKGLTPEWQPLLRDLDRLQEATIEKDGRIVTTRTHVTGQVGNVFKAAGIALPHNLDEQLA
SIO_010081: HB778_RS38415
subclass of: SO_0000673
so part of: HB778_RS38415
location: 127073..128701
location: region:127073-128701:1
so has part: feature:127073-128701:1:exon

WP_183455081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127073-128701:1:exon

HB778_RS38420
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38420
old locus tag: HB778_38555
so part of: sequence
location: 129256..130020
location: region:129256-130020:1
so has part: feature:129256-130020:1:exon
subclass of: SO_0000010

position:129256:1
position: 129256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130020:1
position: 130020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129256-130020:1:exon

HB778_RS38420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38420
old locus tag: HB778_38555
inference: COORDINATES: protein motif:HMM:NF012789.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MIQQTVRRFAQSGDEEISDAHVPRHGSLLTASEDTLKAVKEFACNNARHVWHRMCDPKDAIPLGFDGFLKLWGLSKPQIAADYILLDEAQDTNPVVLEVLRRQNAQLVYVGDRYQQIYEWRGAVNAMDAIKTDAIVSLTQSFRFGPEIAGEASRILQRLGESVPLTGNPAMRSRVGSCNPNAILARTNANVMTALIQCLDEGRKPHLVGDNRDLKELLWGVRDLKEGRPTDVADFFGFTSWESVVDFSKTTEGC
SIO_010081: HB778_RS38420
subclass of: SO_0000673
so part of: HB778_RS38420
location: 129256..130020
location: region:129256-130020:1
so has part: feature:129256-130020:1:exon

WP_183465762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129256-130020:1:exon

HB778_RS38425
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38425
old locus tag: HB778_38560
so part of: sequence
location: 130166..130870
location: region:130166-130870:1
so has part: feature:130166-130870:1:exon
subclass of: SO_0000010

position:130166:1
position: 130166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130870:1
position: 130870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130166-130870:1:exon

HB778_RS38425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38425
old locus tag: HB778_38560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654560.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MTVSAPTYKNHRYPIEIVARAVWLYFRFNLSLRDVEEMLLDRGIVVSYETIRRWCRKHGPDYARRIRRKAPTKDDVWHLDEVVVRINGQKCWLWRAVDQDGYVLDEIVQTRRNTKAARRLLTRLLKKQGLPPKRMITDKLRSYGAAKRQLMPNVEHRSHKGLNNRAENSHLPFRKRERTRQGFRSVGSLQHFVSIFSAVRNLFVPSQTNRSAAQIRTHRRQAMAAWEAVSARPA
SIO_010081: HB778_RS38425
subclass of: SO_0000673
so part of: HB778_RS38425
location: 130166..130870
location: region:130166-130870:1
so has part: feature:130166-130870:1:exon

WP_183455304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130166-130870:1:exon

HB778_RS42405
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42405
pseudo: true
so part of: sequence
location: complement(<130970..131050)
location: region:130970-131050:-1
so has part: feature:130970-131050:-1:exon
subclass of: SO_0000010

position:130970:-1
position: 130970
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:131050:-1
position: 131050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130970-131050:-1:exon

HB778_RS42405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42405
inference: COORDINATES: protein motif:HMM:NF012514.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: isopentenyl-diphosphate Delta-isomerase
SIO_010081: HB778_RS42405
subclass of: SO_0000673
so part of: HB778_RS42405
location: complement(<130970..131050)
location: region:130970-131050:-1
so has part: feature:130970-131050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130970-131050:-1:exon

HB778_RS42410
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42410
pseudo: true
so part of: sequence
location: complement(<131373..>131465)
location: region:131373-131465:-1
so has part: feature:131373-131465:-1:exon
subclass of: SO_0000010

position:131373:-1
position: 131373
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:131465:-1
position: 131465
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131373-131465:-1:exon

HB778_RS42410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004678573.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
SIO_010081: HB778_RS42410
subclass of: SO_0000673
so part of: HB778_RS42410
location: complement(<131373..>131465)
location: region:131373-131465:-1
so has part: feature:131373-131465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131373-131465:-1:exon

HB778_RS38435
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38435
old locus tag: HB778_38570
so part of: sequence
location: complement(131508..131825)
location: region:131508-131825:-1
so has part: feature:131508-131825:-1:exon
subclass of: SO_0000010

position:131508:-1
position: 131508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131825:-1
position: 131825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131508-131825:-1:exon

HB778_RS38435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38435
old locus tag: HB778_38570
inference: COORDINATES: protein motif:HMM:NF020918.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phasin family protein
translation: MPKTPGKCSESIFENTKAVGNELSLKTIAALRANAEADLSHLQALVGAKLPSAVIALQSNLLRKGLEMCVEQTKEFQALSTKGVANVTKPIKDALEKALTDAKAA
SIO_010081: HB778_RS38435
subclass of: SO_0000673
so part of: HB778_RS38435
location: complement(131508..131825)
location: region:131508-131825:-1
so has part: feature:131508-131825:-1:exon

WP_244662195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131508-131825:-1:exon

HB778_RS42415
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42415
old locus tag: HB778_38575
pseudo: true
so part of: sequence
location: complement(<131839..132171)
location: region:131839-132171:-1
so has part: feature:131839-132171:-1:exon
subclass of: SO_0000010

position:131839:-1
position: 131839
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:132171:-1
position: 132171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131839-132171:-1:exon

HB778_RS42415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42415
old locus tag: HB778_38575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011982903.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
SIO_010081: HB778_RS42415
subclass of: SO_0000673
so part of: HB778_RS42415
location: complement(<131839..132171)
location: region:131839-132171:-1
so has part: feature:131839-132171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131839-132171:-1:exon

HB778_RS38440
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38440
old locus tag: HB778_38580
pseudo: true
so part of: sequence
location: complement(132552..133252)
location: region:132552-133252:-1
so has part: feature:132552-133252:-1:exon
subclass of: SO_0000010

position:132552:-1
position: 132552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133252:-1
position: 133252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132552-133252:-1:exon

HB778_RS38440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38440
old locus tag: HB778_38580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009453051.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS38440
subclass of: SO_0000673
so part of: HB778_RS38440
location: complement(132552..133252)
location: region:132552-133252:-1
so has part: feature:132552-133252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132552-133252:-1:exon

HB778_RS42420
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42420
so part of: sequence
location: 134094..134396
location: region:134094-134396:1
so has part: feature:134094-134396:1:exon
subclass of: SO_0000010

position:134094:1
position: 134094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134396:1
position: 134396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134094-134396:1:exon

HB778_RS42420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42420
inference: COORDINATES: protein motif:HMM:NF021581.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2285 domain-containing protein
translation: MLSKPRLRALQRLNALSVGQHLPARLFPPERRGPRLTFVLRALDGSLAGASHRELAEALIGHRRVHADWRDPRDHMRDRIRRAVPHGRALMNGGYKEFLT
SIO_010081: HB778_RS42420
subclass of: SO_0000673
so part of: HB778_RS42420
location: 134094..134396
location: region:134094-134396:1
so has part: feature:134094-134396:1:exon

WP_244662196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134094-134396:1:exon

HB778_RS38450
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38450
old locus tag: HB778_38590
so part of: sequence
location: 135024..135668
location: region:135024-135668:1
so has part: feature:135024-135668:1:exon
subclass of: SO_0000010

position:135024:1
position: 135024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135668:1
position: 135668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135024-135668:1:exon

HB778_RS38450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38450
old locus tag: HB778_38590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPKNGNFSPAPRAFPQALTGLNPPPADPVSTIGLASFPDNVPATDGPSPQKPWGILGEQLPETRWELAESSLALEEDFSGQAWRIVAQFRGDLPPASPDEHDAPTRAGSLVVPADEDAASATYPQTNAHPRQDLSLDAMDEALPREGVQQLLELSPQPLAGPSHSTAGFPAVDGGARERAEDYEQALGILRKHLPETFFGVAKSMLAEGGGLL
SIO_010081: HB778_RS38450
subclass of: SO_0000673
so part of: HB778_RS38450
location: 135024..135668
location: region:135024-135668:1
so has part: feature:135024-135668:1:exon

WP_183455348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135024-135668:1:exon

HB778_RS38455
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38455
old locus tag: HB778_38595
pseudo: true
so part of: sequence
location: 136223..>136699
location: region:136223-136699:1
so has part: feature:136223-136699:1:exon
subclass of: SO_0000010

position:136223:1
position: 136223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136699:1
position: 136699
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136223-136699:1:exon

HB778_RS38455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38455
old locus tag: HB778_38595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS38455
subclass of: SO_0000673
so part of: HB778_RS38455
location: 136223..>136699
location: region:136223-136699:1
so has part: feature:136223-136699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136223-136699:1:exon

HB778_RS38460
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38460
old locus tag: HB778_38600
pseudo: true
so part of: sequence
location: 136751..>136864
location: region:136751-136864:1
so has part: feature:136751-136864:1:exon
subclass of: SO_0000010

position:136751:1
position: 136751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136864:1
position: 136864
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136751-136864:1:exon

HB778_RS38460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38460
old locus tag: HB778_38600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS38460
subclass of: SO_0000673
so part of: HB778_RS38460
location: 136751..>136864
location: region:136751-136864:1
so has part: feature:136751-136864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136751-136864:1:exon

HB778_RS38465
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38465
old locus tag: HB778_38605
so part of: sequence
location: complement(136918..137634)
location: region:136918-137634:-1
so has part: feature:136918-137634:-1:exon
subclass of: SO_0000010

position:136918:-1
position: 136918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137634:-1
position: 137634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136918-137634:-1:exon

HB778_RS38465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38465
old locus tag: HB778_38605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015914829.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MTRFSRDPLYRRHRFPAQVIAHAVWLYFRFPLSLRMVEDMLAARGVIVSHQTVRLWAEKFGRHFANDIRKRSAGKLGDKWYLDEVVITIGGKKHWLWRAVDQDGFVLDVLVQSRRNAKAAKRLMRKLLKGQGRSPRVMITDKLRSYGAAKREIMPGVEHRSHKGLNNRAENSHQPVRRRERIMKRFKSARHLQRFVSVHDPIANLFNVPRHDIPSTHHRELRATAMQAWRQIARLHAE
SIO_010081: HB778_RS38465
subclass of: SO_0000673
so part of: HB778_RS38465
location: complement(136918..137634)
location: region:136918-137634:-1
so has part: feature:136918-137634:-1:exon

WP_183455349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136918-137634:-1:exon

HB778_RS38470
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38470
old locus tag: HB778_38610
pseudo: true
so part of: sequence
location: <137677..138798
location: region:137677-138798:1
so has part: feature:137677-138798:1:exon
subclass of: SO_0000010

position:137677:1
position: 137677
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:138798:1
position: 138798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137677-138798:1:exon

HB778_RS38470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38470
old locus tag: HB778_38610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330199.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISKra4 family transposase
SIO_010081: HB778_RS38470
subclass of: SO_0000673
so part of: HB778_RS38470
location: <137677..138798
location: region:137677-138798:1
so has part: feature:137677-138798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137677-138798:1:exon

HB778_RS38475
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38475
old locus tag: HB778_38615
so part of: sequence
location: 138854..140323
location: region:138854-140323:1
so has part: feature:138854-140323:1:exon
subclass of: SO_0000010

position:138854:1
position: 138854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140323:1
position: 140323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138854-140323:1:exon

HB778_RS38475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38475
old locus tag: HB778_38615
inference: COORDINATES: protein motif:HMM:NF015342.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVERFGRDGFPTSLDEHHALAPADLPQISASAALEAYWKVPAPPAEQPATLNETVGARDRAGAKRRRPATEHKEDDRAAQRWRIGPQPAPAREESHSGTASSSKLKSRRRREFPDNLRKLATEAKGTRFQLSGEECQRVADHGGLLALKAFVDNAEALAKLEFGGHNFSKDDILKILSHKGAAQAVQALLKNAEALAKLDFSGQKLSKDDILKFLGNDGAAQAVQALLKNAEALKKLDFGGHNFSKDDILKILSHKGAAQAVQALLKNAEALKKLDFGGHNFSKDDILKILGNNGAAQAVQALLKNVEPLTKLEFDGQKFSKDDILKFLGNDGAAQAVQALLKNAEALAKLDFSGQKFSKDDILKILGNNGAAQAVQALLKNVEPLTKLEFDGQKFSKDDIVQILRNYGAAQAVQALLKNVEPLTKLEFDGQKFSKDDIVKILGKSGAARAVQAMLQNADELKNMPKPQVLAAASNQRGAAAAIRKLNK
SIO_010081: HB778_RS38475
subclass of: SO_0000673
so part of: HB778_RS38475
location: 138854..140323
location: region:138854-140323:1
so has part: feature:138854-140323:1:exon

WP_183455350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138854-140323:1:exon

HB778_RS38480
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38480
old locus tag: HB778_38620
so part of: sequence
location: 140524..141240
location: region:140524-141240:1
so has part: feature:140524-141240:1:exon
subclass of: SO_0000010

position:140524:1
position: 140524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141240:1
position: 141240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140524-141240:1:exon

HB778_RS38480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38480
old locus tag: HB778_38620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015914829.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MTRFSRDPLYRRHRFSAQVIAHAVWLYFRFPLSLRMVEDMLAARGVIVSHQTVRLWAEKFGRHFANDIRKRSAGELGDKWHLDEVVITIGGKKHWLWRAVDQDGFVLDVLVQSRRNAKAAKRLMRKLLKGQGRSPRVMITDKLRSYGAAKREIMPGVEHRSHKGLNNRAENSHQPVRRRERIMKRFKSARHLQRFVSVHDPIANLFNVPRHDIPSTHHRELRATAMQAWRQIARLHAE
SIO_010081: HB778_RS38480
subclass of: SO_0000673
so part of: HB778_RS38480
location: 140524..141240
location: region:140524-141240:1
so has part: feature:140524-141240:1:exon

WP_183455351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140524-141240:1:exon

HB778_RS42425
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42425
old locus tag: HB778_38625
pseudo: true
so part of: sequence
location: complement(<141294..>141471)
location: region:141294-141471:-1
so has part: feature:141294-141471:-1:exon
subclass of: SO_0000010

position:141294:-1
position: 141294
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:141471:-1
position: 141471
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141294-141471:-1:exon

HB778_RS42425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42425
old locus tag: HB778_38625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015241571.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS42425
subclass of: SO_0000673
so part of: HB778_RS42425
location: complement(<141294..>141471)
location: region:141294-141471:-1
so has part: feature:141294-141471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141294-141471:-1:exon

HB778_RS38485
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38485
old locus tag: HB778_38630
so part of: sequence
location: complement(141825..142883)
location: region:141825-142883:-1
so has part: feature:141825-142883:-1:exon
subclass of: SO_0000010

position:141825:-1
position: 141825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142883:-1
position: 142883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141825-142883:-1:exon

HB778_RS38485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38485
old locus tag: HB778_38630
EC number: 2.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006206521.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MSEASQKKLDAFLGKMVGDLGAIATGAGVVLGDRLGLFKALREGGKMTAAELSTRTGTQERLVREWLSGQAAAGYVDYDEASDEFYLNAEQELVFADEDSPAFMAGAFEFLSALWLDEEKVRQAFQSGKGVAWHDHSACLFRGTERFFRPGYNANLIESWLPALEGVVEKLERGAAVADVGCGHGASTVLMARAFPNSRFVGFDYHAPSIERARKAAEEAGVGANTRFEVAAAKTYPGTYDLVAFFDCLHDMGDPAGAATHVHRSLKPDGTWMIVEPFAHDHLAANLNPVGRVYYAASTFLCTPASVSQEVGLGLGAQAGEARLRRVVTGGGFKRFRRAAETPFNLVLEARP
SIO_010081: HB778_RS38485
subclass of: SO_0000673
so part of: HB778_RS38485
location: complement(141825..142883)
location: region:141825-142883:-1
so has part: feature:141825-142883:-1:exon

WP_183455352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141825-142883:-1:exon

HB778_RS38490
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38490
old locus tag: HB778_38635
pseudo: true
so part of: sequence
location: complement(<142939..143155)
location: region:142939-143155:-1
so has part: feature:142939-143155:-1:exon
subclass of: SO_0000010

position:142939:-1
position: 142939
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:143155:-1
position: 143155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142939-143155:-1:exon

HB778_RS38490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38490
old locus tag: HB778_38635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006203136.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: insulinase family protein
SIO_010081: HB778_RS38490
subclass of: SO_0000673
so part of: HB778_RS38490
location: complement(<142939..143155)
location: region:142939-143155:-1
so has part: feature:142939-143155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142939-143155:-1:exon

HB778_RS38495
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38495
old locus tag: HB778_38640
so part of: sequence
location: 143639..144025
location: region:143639-144025:1
so has part: feature:143639-144025:1:exon
subclass of: SO_0000010

position:143639:1
position: 143639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144025:1
position: 144025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143639-144025:1:exon

HB778_RS38495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38495
old locus tag: HB778_38640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006473258.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSDSMSHHRTFEILTAEPVPSRRKPRHRSDEEKARLVAEAFSPGGNVSAVARSEGLDPSQLYAWRRKALSSGMVAPLTEGASKPAKFTRFEAVGSDTVEIVIGDAVVRAGGDVDPDRLARIIRAVRKA
SIO_010081: HB778_RS38495
subclass of: SO_0000673
so part of: HB778_RS38495
location: 143639..144025
location: region:143639-144025:1
so has part: feature:143639-144025:1:exon

WP_183445375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143639-144025:1:exon

HB778_RS42430
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS42430
pseudo: true
so part of: sequence
location: 144094..>144219
location: region:144094-144219:1
so has part: feature:144094-144219:1:exon
subclass of: SO_0000010

position:144094:1
position: 144094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144219:1
position: 144219
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144094-144219:1:exon

HB778_RS42430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS42430
inference: COORDINATES: protein motif:HMM:NF017528.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
SIO_010081: HB778_RS42430
subclass of: SO_0000673
so part of: HB778_RS42430
location: 144094..>144219
location: region:144094-144219:1
so has part: feature:144094-144219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144094-144219:1:exon

HB778_RS38500
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38500
old locus tag: HB778_38645
pseudo: true
so part of: sequence
location: complement(<144283..144795)
location: region:144283-144795:-1
so has part: feature:144283-144795:-1:exon
subclass of: SO_0000010

position:144283:-1
position: 144283
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:144795:-1
position: 144795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144283-144795:-1:exon

HB778_RS38500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38500
old locus tag: HB778_38645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS38500
subclass of: SO_0000673
so part of: HB778_RS38500
location: complement(<144283..144795)
location: region:144283-144795:-1
so has part: feature:144283-144795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144283-144795:-1:exon

HB778_RS38505
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38505
old locus tag: HB778_38650
so part of: sequence
location: complement(144929..145630)
location: region:144929-145630:-1
so has part: feature:144929-145630:-1:exon
subclass of: SO_0000010

position:144929:-1
position: 144929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145630:-1
position: 145630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144929-145630:-1:exon

HB778_RS38505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38505
old locus tag: HB778_38650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009453051.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MNTAIVSYKRHRFPPQIIAHAVWLYYRFPMSLRLVEEMLLERGIVVSYETIRRWGIKFGPHYTRRLRRKQPSRNDVWHLDEVVITITGRKHWLWRAVDQDGYVLDEIVQNRRNTKAAKRWLTRLLKKQGVAPKRMITDKLRSYGAARRQVMPDVEHRSHKGLNNRAENAHVPLRKRERMMQGFRSPGALQRFVSIFSALRNLFVPPRSKRSALATHIHRLQAMAEWTAVAMVS
SIO_010081: HB778_RS38505
subclass of: SO_0000673
so part of: HB778_RS38505
location: complement(144929..145630)
location: region:144929-145630:-1
so has part: feature:144929-145630:-1:exon

WP_183455353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144929-145630:-1:exon

HB778_RS43005
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS43005
old locus tag: HB778_38655
so part of: sequence
location: complement(145816..146334)
location: region:145816-146334:-1
so has part: feature:145816-146334:-1:exon
subclass of: SO_0000010

position:145816:-1
position: 145816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146334:-1
position: 146334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145816-146334:-1:exon

HB778_RS43005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS43005
old locus tag: HB778_38655
inference: COORDINATES: protein motif:HMM:TIGR01414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter domain-containing protein
translation: MFQSFADKATASYDARSAQAFGEAGYELSYEFARFEPFANLAHVHLKTDGYREKDTNGAGLTSSSSSSDVTYTTLGLHAGSDFVVGGMAVKSYGTLGWRHAFGDVVPRAAHGFAGGQNFAISGTPVAKDAAILEVGLDFRLAANASLAVSYEGQIASSVQEHGVTAKLGVRF
SIO_010081: HB778_RS43005
subclass of: SO_0000673
so part of: HB778_RS43005
location: complement(145816..146334)
location: region:145816-146334:-1
so has part: feature:145816-146334:-1:exon

WP_183455354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145816-146334:-1:exon

HB778_RS38515
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38515
old locus tag: HB778_38660
so part of: sequence
location: complement(146250..149147)
location: region:146250-149147:-1
so has part: feature:146250-149147:-1:exon
subclass of: SO_0000010

position:146250:-1
position: 146250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149147:-1
position: 149147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146250-149147:-1:exon

HB778_RS38515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38515
old locus tag: HB778_38660
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:TIGR01414.1
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter serine protease
translation: MRSAAVLLVATASSGALAQETPPYVNADGTGTYDLQAAMQSWRDDPEFQGNWGLKAMNADGAYALGITGNGVRIGVFDSGILSSHQEFVGGRLNLIYVEGFSTEGKPFGMSGEYNPEINDDHGTGMTGLIVASRDNKKMHGVAFGSPFYVANTGGRDDLQQGSNNPALDFNFFKSTFDALGKKNVRVVNESWGSDSAILSERRTGSISDLVFASRNFWKLRTGGTKTWLDAAVDGSRQHGFVQVVSNGNNSKSANPDLFASQPFLNPDVERKWLAVTGYDETGSQVYNKCGVAKWWCIMGPSGMSSTKTDGNYMDNANGTSAASPHISGALALVMSRYRYMSNEEAVTTLLTTAQNKIADPDREVPKRGDKTFDFLTAVKNGDSRIPNELGGWGLPDLKKAMAGPGQLFGHFAAGLPKGMSDTWANDISDEAIRARKDDDLKEQATLRQLLQSGQGENGKAFTEDDKKNLMNLIVTREKAMQTRGKDPVTGKTYVDSLEKLGDGHLILTGKNTYAGSTWVRGGKLSVDGSITSTVTVDGSGIGKEVEYYTPNGDKQTEQGTTGGTIGGTGTIGGLIAKAGGTVEPGSVTQPIGTLKVGDVGVRFEKGSTYAVEVNSLGASDRIETTGTVTVNGGTVKVPAGWLYKPETRYQILTAAGGMNGQFDKTTSDLAFLDPSLDHRTHDVGLTLSRNQVALASTAATANEMAVAAALENAFPLTPSPTSPGQATPAGEPRADATPELALAPPSPTVQALPATPLDPLLLAVLNLSKASAGHAWAPLSGEIHATVKGALIGESSYARDAVMERLRAAFDGVGASSVPVMAYGPDGVEPVCADTQRFAVWSQAYGAWGTADGDGNAAGYHRSARGFLAGGDVLLGDWRLGLAGGYGHSSYEVDARAASAEADNYTLALYAGTRIEALSLNFGAAHSWHSIDTGRGSCFKALPIRRQPPTMPVRRRPSARQAMS
SIO_010081: HB778_RS38515
subclass of: SO_0000673
so part of: HB778_RS38515
location: complement(146250..149147)
location: region:146250-149147:-1
so has part: feature:146250-149147:-1:exon

WP_183465764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146250-149147:-1:exon

HB778_RS38520
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38520
old locus tag: HB778_38665
so part of: sequence
location: complement(149763..150677)
location: region:149763-150677:-1
so has part: feature:149763-150677:-1:exon
subclass of: SO_0000010

position:149763:-1
position: 149763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150677:-1
position: 150677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149763-150677:-1:exon

HB778_RS38520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38520
old locus tag: HB778_38665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875322.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MAEATTAVSPLRRRMIDDMSLRNLSPATQRSYLHAVAKFSRYFGRSPDRLGLEDVRAFQVYLVSQGISWPALNQTVCALRFFYGVTLDRAGPNPVRIATEGAMWGAIRHHGFLGDTVVVSDDAGQFRIGDHALCWVHAERLVHKLIPVTPDQRQAVDIMRQLIWWFYRDLKSYQRAPCPRHAAALRARFERLFKRRTGYVMLDRLLARLHRRKHELLRVLDRPEIPLHTNGSENDIRTFVTKRKISGGTVSEAGKNARDVLLGLMKTCIKLDVSFFRYLGDRLGIPTQESIPPLPDLVRQAAQA
SIO_010081: HB778_RS38520
subclass of: SO_0000673
so part of: HB778_RS38520
location: complement(149763..150677)
location: region:149763-150677:-1
so has part: feature:149763-150677:-1:exon

WP_244662177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149763-150677:-1:exon

HB778_RS42435
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42435
pseudo: true
so part of: sequence
location: <151174..151509
location: region:151174-151509:1
so has part: feature:151174-151509:1:exon
subclass of: SO_0000010

position:151174:1
position: 151174
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:151509:1
position: 151509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151174-151509:1:exon

HB778_RS42435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015471577.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type III effector HopG1
SIO_010081: HB778_RS42435
subclass of: SO_0000673
so part of: HB778_RS42435
location: <151174..151509
location: region:151174-151509:1
so has part: feature:151174-151509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151174-151509:1:exon

HB778_RS38530
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38530
old locus tag: HB778_38670
so part of: sequence
location: 151551..152138
location: region:151551-152138:1
so has part: feature:151551-152138:1:exon
subclass of: SO_0000010

position:151551:1
position: 151551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152138:1
position: 152138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151551-152138:1:exon

HB778_RS38530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38530
old locus tag: HB778_38670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLNSIDQFSMAASMQEYAAVQEQHPGTLPLIPPDATPADDHGGHPDIGGSMRMPPRSGLRSRDGSLWSRVKSAVRKAVGECCVGKPSSGSAQASGKASSSVLRSDDIGYLVGPLWDHHHWDNGGQLMPREIIRELGKLGFLPGQRNQEQPAHFEINGEHYTAEVKLTPNSNVVFGQSREVYLIHHPPRTATPSA
SIO_010081: HB778_RS38530
subclass of: SO_0000673
so part of: HB778_RS38530
location: 151551..152138
location: region:151551-152138:1
so has part: feature:151551-152138:1:exon

WP_183465765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151551-152138:1:exon

HB778_RS38535
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38535
old locus tag: HB778_38675
so part of: sequence
location: 152147..152308
location: region:152147-152308:1
so has part: feature:152147-152308:1:exon
subclass of: SO_0000010

position:152147:1
position: 152147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152308:1
position: 152308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152147-152308:1:exon

HB778_RS38535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38535
old locus tag: HB778_38675
inference: COORDINATES: protein motif:HMM:NF013828.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MKFAALRQSACVEDLDLRTARGIDRAVMAHLIDGSWIQRHENLLITGPTEPAS
SIO_010081: HB778_RS38535
subclass of: SO_0000673
so part of: HB778_RS38535
location: 152147..152308
location: region:152147-152308:1
so has part: feature:152147-152308:1:exon

WP_280515991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152147-152308:1:exon

HB778_RS38540
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38540
old locus tag: HB778_38680
so part of: sequence
location: complement(152325..154397)
location: region:152325-154397:-1
so has part: feature:152325-154397:-1:exon
subclass of: SO_0000010

position:152325:-1
position: 152325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154397:-1
position: 154397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152325-154397:-1:exon

HB778_RS38540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38540
old locus tag: HB778_38680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011493046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSKITHEHLGRQAIVYIRQSTADQVANNLESQRRQYGLADRARQLGWSDVAVIDDDLGRSGGGVARPGFEKLLAAICEGRVGAVVSIEASRLARNGRDWHTLLEFCGLVGTLILDEDGIYDARHPNDRLLLGMKGTMSEMELSVLRQRSLEALKQKARRGELFMTVAIGYVRIGNNRIEKDPDRRIVEAIALIFAKFAEMQSVRQVHLWFRHERIPLPAVIYGAEGRLIEWKLPVYNTILHILTNPIYAGAYAFGRTGSRVSIDAGRKKVVRGFKKERKDWEVLIPNHHEGYLSWAAYERNLGLIADNANGKNPMSRGALRRGEALLAGLLRCGHCGRKLHVAYSGTDGNTGRYHCRGGFLNHGGDRCISFGGMRVDRDIGAEVIVRLQPLGIEAALAAQTVRSRASEDKRRQVELALEQARYEVGRARRQYDAVDPDNRLVAAELETRWNERLTVVRDLETDLEELTTSSATEPMPVDHERLMLLGADLQRAWTSAGVTSEAKKRIVRTLIDEIVVRIEDSKLDLVIRWHGGAHSALKVKKNRSGQHRWSAEGETIDLVRVLARQMPDRAIASVLNRAGKTTGRGNGWTQSRVCSLRNHNEIPAYREGERQERGEVTLDEAATALSVSPSTVRRLIKDGQLSANQLCKGAPWIIRALDLDRSDVKGAATARRLRRPPSSNPRQKTLELQ
SIO_010081: HB778_RS38540
subclass of: SO_0000673
so part of: HB778_RS38540
location: complement(152325..154397)
location: region:152325-154397:-1
so has part: feature:152325-154397:-1:exon

WP_183465485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152325-154397:-1:exon

HB778_RS41105
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS41105
old locus tag: HB778_38685
pseudo: true
so part of: sequence
location: <154888..>155016
location: region:154888-155016:1
so has part: feature:154888-155016:1:exon
subclass of: SO_0000010

position:154888:1
position: 154888
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:155016:1
position: 155016
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154888-155016:1:exon

HB778_RS41105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS41105
old locus tag: HB778_38685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011544395.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: HB778_RS41105
subclass of: SO_0000673
so part of: HB778_RS41105
location: <154888..>155016
location: region:154888-155016:1
so has part: feature:154888-155016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154888-155016:1:exon

HB778_RS38550
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38550
old locus tag: HB778_38690
so part of: sequence
location: 155754..157463
location: region:155754-157463:1
so has part: feature:155754-157463:1:exon
subclass of: SO_0000010

position:155754:1
position: 155754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157463:1
position: 157463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155754-157463:1:exon

HB778_RS38550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38550
old locus tag: HB778_38690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRNIDEPGKAPISMVSAIEGNITDDSPARPVVGVEESRQSTCSMVKQARSEHQASSGSSTLRMQHTSVRDLDPGLLGEIAERLRPTDLLSMLSTNRRLRFDTWLSPASRERCQRAIRVQAIWARLRGHEPGADRFAARMVPNMIQSLAPNFNYLTRADQKGLVALVQRLRDLDDRNSILIDIGPGLAGLEPDLQEDLVRFAEGLDQPGECASAVGALGKGVAGLAPNLQERLVSLAEGLDEPEHCASALVGVGAGVAGLDRGLQERLVTLAEGIDEPEYCALALWGFGEGLAGLKRDLQERLVRLAERLEDQEHCAAAVEGLAAGVAGLDRELQQCLVSLAEGLEDQEDRASAVQGLAAGVAGLERDLQERLVKLAEGLNQVHGAFALQGFGTGLGGLALDLQERLVKLAEGLDQVHGAFALGDLGTGVGGLARELQERLVKLAEGLEDQKHRGTALIGLGAGVAGLARDLQRRLVRLAEELDQPGDRVAALQGFGEGLAGLEVDLQRRLVVLADRIQGPHRANALQALGRGVAELKGELQGRIAALADGLAQPDHRASALAALLPRR
SIO_010081: HB778_RS38550
subclass of: SO_0000673
so part of: HB778_RS38550
location: 155754..157463
location: region:155754-157463:1
so has part: feature:155754-157463:1:exon

WP_183455357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155754-157463:1:exon

HB778_RS38555
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38555
old locus tag: HB778_38695
so part of: sequence
location: 158003..159361
location: region:158003-159361:1
so has part: feature:158003-159361:1:exon
subclass of: SO_0000010

position:158003:1
position: 158003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159361:1
position: 159361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158003-159361:1:exon

HB778_RS38555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38555
old locus tag: HB778_38695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330199.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISKra4 family transposase
translation: MAAQLRMKVWVELVGADGLPLRREIAIVARNVEGARLGDFGLSLDESKGIQRRLQGEFTQFQADQAAQLDRNCLECGRVRSIHDYRSRTVDSLFGVCRMRVPRFRGCACDGSANPGEGRTEALLNGRATPELQRIQAELGSRLSFREAARVLDLFVPAMRPHNHRTVSNRLAKVADQIEKWDLASPYRLSRADGSPISVFIDGAYIRAVPGYQSRHFEIAMGRVVTKGRPPRQFAASPHVTTGKHDVVRAALRAQGWVPGSDVTVFSDGDVGLQGIVIGATRQPITHILDWFHLSMRLRHIEQAWEGLKSVGNLSIYLRDTALHVPRLRHLLWSGYVREATRAVRDMLCQLEQYARLPDASNKLKRFFELVSNLQTYLIQNKTSLVDYCQRYWADHPISSAPAESAANSLVNARMNKKRQMRWSPAGAHRVLQVRAAVADGRLKQAKFALAA
SIO_010081: HB778_RS38555
subclass of: SO_0000673
so part of: HB778_RS38555
location: 158003..159361
location: region:158003-159361:1
so has part: feature:158003-159361:1:exon

WP_183455359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158003-159361:1:exon

HB778_RS38560
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38560
old locus tag: HB778_38700
pseudo: true
so part of: sequence
location: <159377..159868
location: region:159377-159868:1
so has part: feature:159377-159868:1:exon
subclass of: SO_0000010

position:159377:1
position: 159377
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:159868:1
position: 159868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159377-159868:1:exon

HB778_RS38560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38560
old locus tag: HB778_38700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007538470.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: HB778_RS38560
subclass of: SO_0000673
so part of: HB778_RS38560
location: <159377..159868
location: region:159377-159868:1
so has part: feature:159377-159868:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159377-159868:1:exon

HB778_RS38565
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38565
old locus tag: HB778_38705
pseudo: true
so part of: sequence
location: 159984..161077
location: region:159984-161077:1
so has part: feature:159984-161077:1:exon
subclass of: SO_0000010

position:159984:1
position: 159984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161077:1
position: 161077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159984-161077:1:exon

HB778_RS38565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38565
old locus tag: HB778_38705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477253.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1595 family transposase
SIO_010081: HB778_RS38565
subclass of: SO_0000673
so part of: HB778_RS38565
location: 159984..161077
location: region:159984-161077:1
so has part: feature:159984-161077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159984-161077:1:exon

HB778_RS38570
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38570
old locus tag: HB778_38710
so part of: sequence
location: complement(161231..164320)
location: region:161231-164320:-1
so has part: feature:161231-164320:-1:exon
subclass of: SO_0000010

position:161231:-1
position: 161231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164320:-1
position: 164320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161231-164320:-1:exon

HB778_RS38570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38570
old locus tag: HB778_38710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASGTYPQTDAHPRQDLSSDERDEALRWEEVQQFLGLSPQSLAGSSHSTARFSADGEASERGEDYDQALGILREQLSQTMSDVTEYWLALEKDSSGQALRMIEQFGGDRPPASPDEYDAPTRAGSLAAADEDVASGIYPQTDAHPRQDLSSEAMDEDLPWAELQQLLEHSSQPAVGPDSTPAFPAVDGGASGRVEDYCGQAWQRVKRFRGDPLPANFGGATRRVGEMAQQKNGYDCSVSVLAATHAPLTRLPNRQWLDSASLDFQAVVADRTALLARDGAQPAIALGESHREAPPSSKRKRRSGTEFEKDFSELASKARGASSLVSFKERQPVGERLEPFTDDADALAKLEFGGKKVGKDDILNLRHKGGPRVVAALMKNAVALAKLEFGGRKFGKADILKIVGTVGAAKVVHALLDKAEALAKLDVSGQKLSKDDIVKILGKKGAAPALPALLEKAEALAKLEFSGGQKLSKDDIVKIVGQAGAAKAVPALLENAGALGELKFGDDTFGKDDILKIMGNDGAAQAVSALLKNEKALAKLEFSGGQKLSKDDIVKILGNVGGAQAVQALLEKAEELAKLEFSGGQKLSKDDILKIVGQAGAAKAVPALLDKAEALAKLDVSGQKLSKDDIVKILGNVGGAQAVQALLEKAEELAKLEFSGGQKLSKDDIVKIVGQAGAAKAVPALLENAGALGELKFGDDTFGKDDILKIMGNDGAAQAVSALLKNEKALAKLEFSGGQKLSKDDIVKILGNVGGAQAVPALLGNAEALAKLEFSCGHKLSKDDILKIMGNVGAAQAVPALLSKAEALAKLDFSGGQKLSKDDIVKILGNVGGAQAVPALLGNAEALAKLEFSCGHKLSKDDILKIMGNVGAAQAVPALLSKAEALAKLDFSGGQKLSKDDIVKILGNVGGAQAVPALLGNAEALAKLEFSCGHKLSKDDILKIMGNVGAAQAVPALLSKAEALAKLDFSGGQKLSKDDIVKILGNVGGAQAVQALLESTDHFKNMPKSEVLAAASKPRNASVAIRKLK
SIO_010081: HB778_RS38570
subclass of: SO_0000673
so part of: HB778_RS38570
location: complement(161231..164320)
location: region:161231-164320:-1
so has part: feature:161231-164320:-1:exon

WP_183465767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161231-164320:-1:exon

HB778_RS38575
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38575
old locus tag: HB778_38715
so part of: sequence
location: complement(164841..165290)
location: region:164841-165290:-1
so has part: feature:164841-165290:-1:exon
subclass of: SO_0000010

position:164841:-1
position: 164841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165290:-1
position: 165290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164841-165290:-1:exon

HB778_RS38575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38575
old locus tag: HB778_38715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRIVTKWTWKTRRSGSPQFEERPVGLGAYSADEFGAICRWPAISLFVPNAQPFTRQAARYLLARAEHAPDMFGSSPHPRHSNGFSLESTGMTCPSIRAGFLFHRPTVTSLHDSTTFGPLMALFYNPARCRRDRFEVRQGSPKKQEMAS
SIO_010081: HB778_RS38575
subclass of: SO_0000673
so part of: HB778_RS38575
location: complement(164841..165290)
location: region:164841-165290:-1
so has part: feature:164841-165290:-1:exon

WP_183455361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164841-165290:-1:exon

HB778_RS38580
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38580
old locus tag: HB778_38720
so part of: sequence
location: complement(166023..166691)
location: region:166023-166691:-1
so has part: feature:166023-166691:-1:exon
subclass of: SO_0000010

position:166023:-1
position: 166023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166691:-1
position: 166691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166023-166691:-1:exon

HB778_RS38580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38580
old locus tag: HB778_38720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533396.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2285 domain-containing protein
translation: MRLIGAMTYAAIQHFSTWSRRPVTCHDGVSCFAESYGRNSLVFWSPLWCVHVLPVIAEHLSASSATAPFELSALPFRATVLLAPDTGQHVLLRNAEHTLQLAVSGADILQPVCLHTEAIWPAMLSKHRLRALECLNALSVGQHLPARLFPPEKRGPRLTFVLRALDGSLAGASHRELAEALIGHRRVNADWRDPRDHLRDRIRRAVSRGRALMNGGYRDFLT
SIO_010081: HB778_RS38580
subclass of: SO_0000673
so part of: HB778_RS38580
location: complement(166023..166691)
location: region:166023-166691:-1
so has part: feature:166023-166691:-1:exon

WP_244662178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166023-166691:-1:exon

HB778_RS38585
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38585
old locus tag: HB778_38725
so part of: sequence
location: 167136..167837
location: region:167136-167837:1
so has part: feature:167136-167837:1:exon
subclass of: SO_0000010

position:167136:1
position: 167136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167837:1
position: 167837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167136-167837:1:exon

HB778_RS38585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38585
old locus tag: HB778_38725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010916038.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MFKGRHFDQSVILLCVRWYLAYGLSLRDLKEMMAERGIGVDHSTIHRWVVHFSPRLLERFNRRKRAVTRKWHVDETYIKVRGKWMYLYRAIDSAGDTVEFWFSEHRDLLAAKRFFRKALERHGRPARVVIDGSQTNREALVSCDAENRLRRPSRRAPKRIGIRQSRYLNNRIEQDHRRIKRRVRPMLGFKSFASATATLAGVEMIHMMRKRQARYAYNPNPSIAEQFEIIAAA
SIO_010081: HB778_RS38585
subclass of: SO_0000673
so part of: HB778_RS38585
location: 167136..167837
location: region:167136-167837:1
so has part: feature:167136-167837:1:exon

WP_183455459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167136-167837:1:exon

HB778_RS38590
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38590
old locus tag: HB778_38730
so part of: sequence
location: complement(167854..168582)
location: region:167854-168582:-1
so has part: feature:167854-168582:-1:exon
subclass of: SO_0000010

position:167854:-1
position: 167854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168582:-1
position: 168582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167854-168582:-1:exon

HB778_RS38590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38590
old locus tag: HB778_38730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: integrase
translation: MPEPDEFTQKQSVEAIRLYTVYRHELDHSEIGGRFMPYRWWTLPNPLTVIWMPYSSMLSEYASELANIINDLTHDVRRLRAWARVAAALSDKEKLAVSHEFINTLGTVALGRPYAIKSRFAFAAGHLCHQANRTKDLQGWRDEFPNERALYLDDIDPICRGWRRFRTFKRRVEPIAGGAFKRATGDFRNAYNHRFSSRFLIGMSAMVTRIVGEDGRICYGIGGSEPLNLDRFRCKFSYRHRN
SIO_010081: HB778_RS38590
subclass of: SO_0000673
so part of: HB778_RS38590
location: complement(167854..168582)
location: region:167854-168582:-1
so has part: feature:167854-168582:-1:exon

WP_183465768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167854-168582:-1:exon

HB778_RS38595
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38595
old locus tag: HB778_38735
pseudo: true
so part of: sequence
location: complement(168690..170047)
location: region:168690-170047:-1
so has part: feature:168690-170047:-1:exon
subclass of: SO_0000010

position:168690:-1
position: 168690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170047:-1
position: 170047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168690-170047:-1:exon

HB778_RS38595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38595
old locus tag: HB778_38735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330199.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISKra4 family transposase
SIO_010081: HB778_RS38595
subclass of: SO_0000673
so part of: HB778_RS38595
location: complement(168690..170047)
location: region:168690-170047:-1
so has part: feature:168690-170047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168690-170047:-1:exon

HB778_RS38600
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38600
old locus tag: HB778_38740
pseudo: true
so part of: sequence
location: complement(170161..170876)
location: region:170161-170876:-1
so has part: feature:170161-170876:-1:exon
subclass of: SO_0000010

position:170161:-1
position: 170161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170876:-1
position: 170876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170161-170876:-1:exon

HB778_RS38600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38600
old locus tag: HB778_38740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015914829.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS38600
subclass of: SO_0000673
so part of: HB778_RS38600
location: complement(170161..170876)
location: region:170161-170876:-1
so has part: feature:170161-170876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170161-170876:-1:exon

HB778_RS38605
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38605
old locus tag: HB778_38745
so part of: sequence
location: 170811..171431
location: region:170811-171431:1
so has part: feature:170811-171431:1:exon
subclass of: SO_0000010

position:170811:1
position: 170811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171431:1
position: 171431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170811-171431:1:exon

HB778_RS38605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38605
old locus tag: HB778_38745
EC number: 2.5.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913511.1
GO function: GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine phosphate synthase
translation: MGNHLRRKSVATIKRITGKSGHAARSHILIDARLTLRCRDEATLRTEIRRANDVCAVHRCQLIVNDYWRLAIEKGCDFVHLDHEDLAAADLLAIKYAGLKLGLSTHDHAELETALAAEPDYIALGPIYPTILKKMKWRPQGVERIGEWKRRVAPIPLVAIGGLNPDRLDGVFAAGADSAAVVTDITFNADPELRTREWIEKTDPSR
SIO_010081: HB778_RS38605
subclass of: SO_0000673
so part of: HB778_RS38605
location: 170811..171431
location: region:170811-171431:1
so has part: feature:170811-171431:1:exon

WP_183465769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170811-171431:1:exon

HB778_RS38610
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38610
old locus tag: HB778_38750
pseudo: true
so part of: sequence
location: 171422..172184
location: region:171422-172184:1
so has part: feature:171422-172184:1:exon
subclass of: SO_0000010

position:171422:1
position: 171422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172184:1
position: 172184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171422-172184:1:exon

HB778_RS38610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38610
old locus tag: HB778_38750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011581891.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
SIO_010081: HB778_RS38610
subclass of: SO_0000673
so part of: HB778_RS38610
location: 171422..172184
location: region:171422-172184:1
so has part: feature:171422-172184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171422-172184:1:exon

HB778_RS38615
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38615
old locus tag: HB778_38755
pseudo: true
so part of: sequence
location: complement(172858..173454)
location: region:172858-173454:-1
so has part: feature:172858-173454:-1:exon
subclass of: SO_0000010

position:172858:-1
position: 172858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173454:-1
position: 173454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172858-173454:-1:exon

HB778_RS38615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38615
old locus tag: HB778_38755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872025.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
SIO_010081: HB778_RS38615
subclass of: SO_0000673
so part of: HB778_RS38615
location: complement(172858..173454)
location: region:172858-173454:-1
so has part: feature:172858-173454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172858-173454:-1:exon

HB778_RS38620
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38620
old locus tag: HB778_38760
pseudo: true
so part of: sequence
location: <173510..>173775
location: region:173510-173775:1
so has part: feature:173510-173775:1:exon
subclass of: SO_0000010

position:173510:1
position: 173510
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:173775:1
position: 173775
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173510-173775:1:exon

HB778_RS38620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38620
old locus tag: HB778_38760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014530111.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
SIO_010081: HB778_RS38620
subclass of: SO_0000673
so part of: HB778_RS38620
location: <173510..>173775
location: region:173510-173775:1
so has part: feature:173510-173775:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173510-173775:1:exon

HB778_RS42440
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42440
so part of: sequence
location: complement(174139..174309)
location: region:174139-174309:-1
so has part: feature:174139-174309:-1:exon
subclass of: SO_0000010

position:174139:-1
position: 174139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174309:-1
position: 174309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174139-174309:-1:exon

HB778_RS42440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVNPPPVVLLDAKRAAELHRLGSVTPHYFFKELERAGSLERLVDEAIAEARTNNA
SIO_010081: HB778_RS42440
subclass of: SO_0000673
so part of: HB778_RS42440
location: complement(174139..174309)
location: region:174139-174309:-1
so has part: feature:174139-174309:-1:exon

WP_244662179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174139-174309:-1:exon

HB778_RS38630
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38630
old locus tag: HB778_38770
so part of: sequence
location: complement(174474..175370)
location: region:174474-175370:-1
so has part: feature:174474-175370:-1:exon
subclass of: SO_0000010

position:174474:-1
position: 174474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175370:-1
position: 175370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174474-175370:-1:exon

HB778_RS38630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38630
old locus tag: HB778_38770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003574402.1
GO function: GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MDTLTSLRVFCTVADLKSFTAAADRLGISPAMASKHVMQLENRLGTRLLNRTSRRVSLTESGALYFNQTKQMLEGLDEVEAAVGNVTVAPRGTLKLSAPVWAASSCFVDILAAYNQRYPDVCLDVDLSGRIVNLVDEGFDLALRATSRERLDPGLVARPLTQIEFRLMASPEYLERTGRPQRITDLNGHALLWFSGINLGDSLSLEGPDGRHRVTFRRVMQSENETILQLAALRGMGLVFLPKWMVEPDIEAGRLEMVLPDAIGFTNTLHAVYPSRKYLSAKVRTFIDFMTARLQEVQ
SIO_010081: HB778_RS38630
subclass of: SO_0000673
so part of: HB778_RS38630
location: complement(174474..175370)
location: region:174474-175370:-1
so has part: feature:174474-175370:-1:exon

WP_183465770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174474-175370:-1:exon

HB778_RS38635
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38635
old locus tag: HB778_38775
so part of: sequence
location: 175531..176379
location: region:175531-176379:1
so has part: feature:175531-176379:1:exon
subclass of: SO_0000010

position:175531:1
position: 175531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176379:1
position: 176379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175531-176379:1:exon

HB778_RS38635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38635
old locus tag: HB778_38775
EC number: 1.13.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018497206.1
GO function: GO:0051213 - dioxygenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class III extradiol ring-cleavage dioxygenase
translation: MTDSLLPTYFISHGGGPWPYITGEFRRNFDVLEKSLVDMRAELGSAPKAVLVISGHWEETGFAISSGVKPGMVYDYHGFPEYLYSIAYNAPGSPELANRVQRRLLASGIEAALDPTRGYDHGTFSIMKPLYPDEDIPLVQLSLDMGYDPALHIKVGRALAPLRAEGVLIIGSGLSYHNLSAMRGTDGYEPSRRFDAWLQETLMHCPSEKRTERLIEWERAPAARAAHPREDHLIPLMVVVGAAEDEPGATIYHQKDFAGGLTASSFRFGLAPSAAQANGDAP
SIO_010081: HB778_RS38635
subclass of: SO_0000673
so part of: HB778_RS38635
location: 175531..176379
location: region:175531-176379:1
so has part: feature:175531-176379:1:exon

WP_183455365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175531-176379:1:exon

HB778_RS38640
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38640
old locus tag: HB778_38780
so part of: sequence
location: 176376..176756
location: region:176376-176756:1
so has part: feature:176376-176756:1:exon
subclass of: SO_0000010

position:176376:1
position: 176376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176756:1
position: 176756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176376-176756:1:exon

HB778_RS38640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38640
old locus tag: HB778_38780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018241093.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione S-transferase N-terminal domain-containing protein
translation: MISETFKPIVYLKENCPFCLKVRLFLLESGLASEVESRDFVSGTAGEQEIRTELLPHLDEVSFPCAQLEPGRYVTESDDIVAFFAAKAGRDPARLPVYRNYVDGVFAMSMKLWKENQELKKAVSAA
SIO_010081: HB778_RS38640
subclass of: SO_0000673
so part of: HB778_RS38640
location: 176376..176756
location: region:176376-176756:1
so has part: feature:176376-176756:1:exon

WP_183455366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176376-176756:1:exon

HB778_RS38645
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38645
old locus tag: HB778_38785
so part of: sequence
location: 176784..177182
location: region:176784-177182:1
so has part: feature:176784-177182:1:exon
subclass of: SO_0000010

position:176784:1
position: 176784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177182:1
position: 177182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176784-177182:1:exon

HB778_RS38645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38645
old locus tag: HB778_38785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018497208.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DoxX family protein
translation: MLDTVKWTPRVLAILRIMTALLFLEHATMKFLQFPAAIPGVSYPLPAIMIVAGTIEVITALLMFVGFYTRLAAFIASGEMAAAYFMAHASQGFWPALNFGEPAILFCFIFLYLALAGGGAWALENARRPAMA
SIO_010081: HB778_RS38645
subclass of: SO_0000673
so part of: HB778_RS38645
location: 176784..177182
location: region:176784-177182:1
so has part: feature:176784-177182:1:exon

WP_183455367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176784-177182:1:exon

HB778_RS38650
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38650
old locus tag: HB778_38790
so part of: sequence
location: 177242..178144
location: region:177242-178144:1
so has part: feature:177242-178144:1:exon
subclass of: SO_0000010

position:177242:1
position: 177242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178144:1
position: 178144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177242-178144:1:exon

HB778_RS38650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38650
old locus tag: HB778_38790
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160333.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-dependent oxidoreductase
translation: MKAALLKSYGDVDHFEIADIPTPQPGPGEVLIKIEASAVNPFDLVLRQGFMAEFIPLPLPAVLGGDAAGAISALGEGVTGFAVGDRVVADFPANGKGAHAEYGVVAATSVAKLPAELSFEQGASLVKAGLTGRQTVEALGVKAGDRVLVSGGLGTVGRSAIQYLKQIGAKPVAGVRRERLSEGRDVAGEALDITIPAAVPSFDYAISAAGPVAGNLISHVRDGGHVASVVPVPEGANAGNRLAIIELYHRTDAATLNAVLDSAVRGQLVIPISHTFTLDQIGAAQKAVAAGAPGKVVLKH
SIO_010081: HB778_RS38650
subclass of: SO_0000673
so part of: HB778_RS38650
location: 177242..178144
location: region:177242-178144:1
so has part: feature:177242-178144:1:exon

WP_183465771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177242-178144:1:exon

HB778_RS38655
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38655
old locus tag: HB778_38795
pseudo: true
so part of: sequence
location: 178213..>178553
location: region:178213-178553:1
so has part: feature:178213-178553:1:exon
subclass of: SO_0000010

position:178213:1
position: 178213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178553:1
position: 178553
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178213-178553:1:exon

HB778_RS38655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38655
old locus tag: HB778_38795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006336444.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MocE family 2Fe-2S type ferredoxin
SIO_010081: HB778_RS38655
subclass of: SO_0000673
so part of: HB778_RS38655
location: 178213..>178553
location: region:178213-178553:1
so has part: feature:178213-178553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178213-178553:1:exon

HB778_RS38660
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38660
old locus tag: HB778_38800
so part of: sequence
location: 178579..179211
location: region:178579-179211:1
so has part: feature:178579-179211:1:exon
subclass of: SO_0000010

position:178579:1
position: 178579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179211:1
position: 179211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178579-179211:1:exon

HB778_RS38660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38660
old locus tag: HB778_38800
inference: COORDINATES: protein motif:HMM:NF014670.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: creatininase family protein
translation: MIFKEQVRWEFLKPQEFLERQKQKPVVYLPMGLCEPHGHVAPFGLDTIKADWLCDEAADRFGGVGAPTMAYHTHETGYHAPWLKEVMGGVNPRLAALPPHLLLETLLYQLRAFRNAGFQAVVVVSGHHGSQDDLRMIAEAFAGAFPIQHFVRTDPELVSGKFTGDHAGRYELSQLLAIRPDLVALDRADRIGMDPLDVSRRILTPLKHRL
SIO_010081: HB778_RS38660
subclass of: SO_0000673
so part of: HB778_RS38660
location: 178579..179211
location: region:178579-179211:1
so has part: feature:178579-179211:1:exon

WP_183455369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178579-179211:1:exon

HB778_RS38665
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38665
old locus tag: HB778_38805
so part of: sequence
location: complement(179281..180909)
location: region:179281-180909:-1
so has part: feature:179281-180909:-1:exon
subclass of: SO_0000010

position:179281:-1
position: 179281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180909:-1
position: 180909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179281-180909:-1:exon

HB778_RS38665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38665
old locus tag: HB778_38805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838287.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: MFVVERVARGHRYLYLVESVRDGKTVRQRTIKALGRKDALVASGELDRLAASIARHGERSLILSDIDAGRIASRRIGGPLLFGRLWERLGIGEVLEEVLEGRQFGFAVERAVFVGTLHRLFVSGSDRDCANWMADYGIEGAEGLALHHFYRAMAWLGEELGEKAQGALVARCVKDAIEEKLFARRQDLFTDLSLVFMDTTSLSFHGAGGETLGKRGHSKDFRPDLAQMILALVVDAEGRPICTEMVPGNTADVTVLLPVVDRLRTRFGVTRACVVADRGMISADTIAALEKLGMEYILGARERSSSVIHNVVLNDTAPMVPLVLERQRGETQLWVKEVKVGKDRYIVSRNDAEAEKDKADRQAIIAGLEAQLKKGDKALVGNSAYRRYLKASGKNFKIDVGKLAEEARYDGITVVRTNAKVTPLQAVLRYRDLLEVESLFRAAKATFNTRPIFHQSDAAIRGHVFCSFLGLVLSKELYRLCRAKGLTPEWQPLLRDLDRLQEATIEKDGRIVTTRTHVTGQVGNVFKASGIALPHNLDEQLA
SIO_010081: HB778_RS38665
subclass of: SO_0000673
so part of: HB778_RS38665
location: complement(179281..180909)
location: region:179281-180909:-1
so has part: feature:179281-180909:-1:exon

WP_183462928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179281-180909:-1:exon

HB778_RS41110
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS41110
so part of: sequence
location: 181583..181969
location: region:181583-181969:1
so has part: feature:181583-181969:1:exon
subclass of: SO_0000010

position:181583:1
position: 181583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181969:1
position: 181969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181583-181969:1:exon

HB778_RS41110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS41110
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDKIKLLIAQAKEAGAESISLIPSNDGAIEPDEKRLSDLRGALAVILPMLEEADLVVLLEPLGFTTSSLRRKREAVEAIEAVGGRIGSGWCTIRSTITSLARPNFSRNGQASCIFPASLIHPLHPRR
SIO_010081: HB778_RS41110
subclass of: SO_0000673
so part of: HB778_RS41110
location: 181583..181969
location: region:181583-181969:1
so has part: feature:181583-181969:1:exon

WP_210308096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181583-181969:1:exon

HB778_RS41115
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS41115
so part of: sequence
location: 181966..182163
location: region:181966-182163:1
so has part: feature:181966-182163:1:exon
subclass of: SO_0000010

position:181966:1
position: 181966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182163:1
position: 182163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181966-182163:1:exon

HB778_RS41115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS41115
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDGHRILVDEADRLWNVEQIKTLVAMGYKGAYSYECFAPSVHADENIEASLKTSIKLIENSAAQ
SIO_010081: HB778_RS41115
subclass of: SO_0000673
so part of: HB778_RS41115
location: 181966..182163
location: region:181966-182163:1
so has part: feature:181966-182163:1:exon

WP_210308097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181966-182163:1:exon

HB778_RS38675
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38675
old locus tag: HB778_38815
so part of: sequence
location: complement(182722..183786)
location: region:182722-183786:-1
so has part: feature:182722-183786:-1:exon
subclass of: SO_0000010

position:182722:-1
position: 182722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183786:-1
position: 183786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182722-183786:-1:exon

HB778_RS38675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38675
old locus tag: HB778_38815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011995907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: caspase family protein
translation: MKFDQGRALIIGVANYEAVGGLPAAVLNDALDTAETLKSSAYCGYPEANVTVLTDDASTLENIRKALADLAATATADDTVAIFFSGHGARIGSGAEATSALVPYDCKLTDVAGTSLGEAELSAAIAAIKAPRVILVVDACHAAGTATLKSGLGEDGEDGIDEGFDEKSLQQLARGTGRVVLASSRATETSLVLRRERNSVFTTAMLSGLKGAATAASDGTIRVFDLFNHVSETVRQSVPGRQHPVFKASDLEENFPVALALGGTKSISPGVNQRHRDLEQIMPDLFPLGPTDQDIWLRAGGDVSRLRLSGNGRAQWFAALRLISLGGGGSISRESLIDAALDEFPAHRELKALR
SIO_010081: HB778_RS38675
subclass of: SO_0000673
so part of: HB778_RS38675
location: complement(182722..183786)
location: region:182722-183786:-1
so has part: feature:182722-183786:-1:exon

WP_183455372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182722-183786:-1:exon

HB778_RS38680
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38680
old locus tag: HB778_38820
so part of: sequence
location: complement(183820..186297)
location: region:183820-186297:-1
so has part: feature:183820-186297:-1:exon
subclass of: SO_0000010

position:183820:-1
position: 183820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186297:-1
position: 186297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183820-186297:-1:exon

HB778_RS38680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38680
old locus tag: HB778_38820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011995908.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: effector-associated domain EAD1-containing protein
translation: MRVDQAIYGTVKLGHALRYASGDRKLAGELAQRLDLPDTEPQGADWSPVTSGFAVRDWYVVARTFSDPSVGRSGMVVTHALICDLEEIAALDDLRPLLAHLITSFDAAPAAVEALEVTPVPGMPPATSDLADTAQALVSRGSGPVVRIGSDGFEKLMVALWGRLWPALRRKLYFRLSFGPKDVVEKPEPTIVCTPASLVGRWQQQQRIVGRSGAERPQAAGMIDGSADGAELREFGDRIGANLDDFQELQLLEQAHAIASTTPNTVARLVSATRLIERLSPDPARGEVEKRTIVERLVEVLPTAQPSEILTLRNLALPGLETSGLVWQALELWFEQNNYLPSDDADIVTIVADALIDDDAIAPWREAARRGLDRSAVATGGQFAAGFWRWAKSEPRVSAPLVALVASDRKGLEALEAAAPTDLDTATAKPIIASAAKQKLFRLHAIAAGASMKPADAASAQSAVEPGADVTAMRLAMRRAKPGEILDAVARVPDARVLTIAGEAVAKDPTLLGRRDMSTAPNRRIWVAALKADTGAWRGPEDPRKAFNQLLDEQIDGGRPPAELLHLLSVSPLADLTTYPRRSKVWDKVPTATRDRLLAATTDAWFASAGAGQQNTTIEPELVERIVRDPRLDQLLMRLAAGTLAEGLHVIDGLGGLDHARFRRWVSTAVRAVRSITPADADLLGRAVASRGRSDIVDDLISIYRAGRNDVAPVLRHCLGLIGLVERWFLGLSPVSASEKWDVLTELAAELFPNGPDQDAMWERSGGRDADLRHHGTGKERWRGAIRDIQNGRQPRVSRLIQQMRADFPENPNLRLMANDPLFRN
SIO_010081: HB778_RS38680
subclass of: SO_0000673
so part of: HB778_RS38680
location: complement(183820..186297)
location: region:183820-186297:-1
so has part: feature:183820-186297:-1:exon

WP_183465773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183820-186297:-1:exon

HB778_RS38685
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38685
old locus tag: HB778_38825
so part of: sequence
location: complement(186316..187146)
location: region:186316-187146:-1
so has part: feature:186316-187146:-1:exon
subclass of: SO_0000010

position:186316:-1
position: 186316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187146:-1
position: 187146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186316-187146:-1:exon

HB778_RS38685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38685
old locus tag: HB778_38825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011995909.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQTSNSILLVGESGVGKTHYGAQLLRRLMRIPGALRMNGAATNLEAFEAALESLDEGRAAGHTARSVNVDSVWPVVDANGREADLVWPEYGGEQIKSVIENRRLPDTWQKRVDEADAWLLLIRPQQTSVGDDMFSKPLAGLKGVSVENREVHPSDQARLVELLQMLIFSHRSTSRLHRLPRLGVLLTCWDEAGIAQTPSEALEARLPLVSAFVRSNWRQPLIMGLSALERPLSPTTRDMEYASKGPEHFGYVVEANGTKSGDLALPIYHLLDAGD
SIO_010081: HB778_RS38685
subclass of: SO_0000673
so part of: HB778_RS38685
location: complement(186316..187146)
location: region:186316-187146:-1
so has part: feature:186316-187146:-1:exon

WP_183465774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186316-187146:-1:exon

HB778_RS38690
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38690
old locus tag: HB778_38830
so part of: sequence
location: complement(187143..188111)
location: region:187143-188111:-1
so has part: feature:187143-188111:-1:exon
subclass of: SO_0000010

position:187143:-1
position: 187143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188111:-1
position: 188111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187143-188111:-1:exon

HB778_RS38690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38690
old locus tag: HB778_38830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015241822.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKCAQATCFVPGTGCDLGHTDLSKCPIWHGAKVTDTADEELSGEMLMPWSGSALGFADLGFVSGRGKPIVIGVVGPQNAGKTTLLAAWYLLLGRGLAGTKGQLFAGSYTLSGWEAVAGSMRWAPGQPPGFPAHTTSRGGRAPGLLHLTFRDENGDRPVDYLFTDAPGEWFQRWAINRDSDEGAGARWVSDNADAFMIVADRDALAGELMGTARGSLQRIAKRLGAERGGRPVALVWTKSDVDIPPEMEEAVRGAVTDAMSDTVEHSVSVVGAPDGDPLLNKGAGLVELLQWAIGVRRPGVRLPPPASTSDDPLFIYGNNKP
SIO_010081: HB778_RS38690
subclass of: SO_0000673
so part of: HB778_RS38690
location: complement(187143..188111)
location: region:187143-188111:-1
so has part: feature:187143-188111:-1:exon

WP_183465775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187143-188111:-1:exon

HB778_RS38695
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38695
old locus tag: HB778_38835
so part of: sequence
location: complement(188115..189344)
location: region:188115-189344:-1
so has part: feature:188115-189344:-1:exon
subclass of: SO_0000010

position:188115:-1
position: 188115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189344:-1
position: 189344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188115-189344:-1:exon

HB778_RS38695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38695
old locus tag: HB778_38835
inference: COORDINATES: protein motif:HMM:NF039772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase-associated system all-helical protein GASH
translation: MKKNPSKALSYSLIAFDPNAPEDDPVVQEALAALQNRWTTYRNTFAATPIAVIRAILLDALVNAAAEDDRVGVCFIASARNALPLLPVDNERDIWIGIVEQVERRVDARAEEEWATPETISVQPMKYQVPTLTVPDVKIGEASQTDLQNGMTAAAGPSSHHPQQGGVATGGNPHWPQQQQQWVYEFGKRSGTAIAAAINAAMSEIEVSQPDLAEPFSKLATAVSGYVDDTLKSISAATAGLQRRTNLLWWREALYSPSARKSYRELPPSVAAALMALDLFETVPLFSPASVSAFLGEAVLRLNGTAGGGKRPVGDLVAEAQDHDGLASLRAAAGNLAAAPDGRGPLLALIGHPAHTGARNADDFQRLTGVPANSELDAVAWAGWLFRELQASKAATDASPAKRRSAKKG
SIO_010081: HB778_RS38695
subclass of: SO_0000673
so part of: HB778_RS38695
location: complement(188115..189344)
location: region:188115-189344:-1
so has part: feature:188115-189344:-1:exon

WP_244662197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188115-189344:-1:exon

HB778_RS38700
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38700
old locus tag: HB778_38840
so part of: sequence
location: complement(189399..190345)
location: region:189399-190345:-1
so has part: feature:189399-190345:-1:exon
subclass of: SO_0000010

position:189399:-1
position: 189399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190345:-1
position: 190345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189399-190345:-1:exon

HB778_RS38700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38700
old locus tag: HB778_38840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611376.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MTRSLSADLRGRVILAISEGVSTREAARRFRIGIATAGNWYRRYRETGEMAARKQGQPSRSKLDPHEAFILGLIEETPDITLAEIAERLAAGHGVRVVPSTIWMFLDRRCVTFKKKTAHASEQQRPDVKARRCAWFDGQLDLDPEKLIFIDETAASTKMARLRGRAKCGERCRAPVPHGHWKTTTFTAGLRLNGLTAPMLLDGPMNGAAFLAYAEQVLAPELSPGDIVVMDNLPAHKITGVREAIQRTGARLLLLPPYSPDFNPIEMAFSKLKALLRKAAARSIDQLWSVIADCLDAFKPAECRNYFEAAGYDPE
SIO_010081: HB778_RS38700
subclass of: SO_0000673
so part of: HB778_RS38700
location: complement(join(189399..190006,190006..190345))
location: region:189399-190345:-1
so has part: feature:190006-190345:-1:exon
so has part: feature:189399-190006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190006-190345:-1:exon

position:190006:-1
position: 190006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:189399-190006:-1:exon

HB778_RS38705
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38705
old locus tag: HB778_38845
so part of: sequence
location: complement(190692..193664)
location: region:190692-193664:-1
so has part: feature:190692-193664:-1:exon
subclass of: SO_0000010

position:190692:-1
position: 190692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193664:-1
position: 193664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190692-193664:-1:exon

HB778_RS38705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38705
old locus tag: HB778_38845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012881181.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MTSIDRTAYPRPGDPLTAEELNVRYLLNEADLFFVRDKALTDTGRLTLATVLKGRQDLGYFPSVSDVHVGTLAYLAAQLDLDAVPPLLDETRQKTTLHRYRTAVRIHLGVAAYSETAEQLVSVTVLAAAETMSDPAGLINRGIEALGKASIDLPAFSTLDRLVNHLRTQVHTRMYDQVAVRLTADVVAALDGLLTVPPGAATTPFNRLKQTPGPARPETIRLWIERLHWLNNLIDPDPPLADITHTKLRQFAAEARALEVSELLAIARPGRRYLLVLSLLRQVHAQCRDELIEMLLRRVRKTQAAAKEKLKAFQEQHRDVEEKLIAVQGQVLETAKEGESDTDTGRRIRALLAEQGGVEALSQQCETVSAWHRNNDLPLLWPIHAKTRSLLFQLLDLMEIRSATQDRSLLDALSIVIEHRHARRDELAGPLELSFASQRWQSFVAKRRGGSTVVDRRALEVCVFIHLADALQATDLFVVGAETFDDYRTQLLPWPDCEARLAEYCDALGLPGSGEHLVDQLRRELTATAVAVDADFPSNAELTIDADGVPHLKQLRAKSLPEGLQGFEMEVHARMRERHLLDILRDGTFWTNFTRHFGPPSGADPKLTRAEQRYVFTTFGYGCNLGPVQAARHAPAIASADTLRRLNAQHINTSKLEAAMTDLIDAYNRFPLPKIWGAGRAAIADGTHVPLRENNLLGAQHIRYGAYGGIAYHHIADNYIALFTTFIPCGVWEAVHILDGLMKNRSTIQPDILHADTQGQSEPVFGLSRFLGIMLMPRMRNWGDATFYRPDKSVRYQHIDRLFTREIDWSLISTHWQDMMQVVLSIQAGLVLPSMLLRKLGSHNRKSRLYQAFRELGRVERTLFLLRYIANPEIRCTIRAETTKIESFNDFLDWITFGGPIIKSGDPVEQEKQVKYASLVANAIMLSNVADLTEALASMANDGLHVTPKLAAALSPYTRRHIRRFGKYELDMDDRPAPLVPKQLPFDLPL
SIO_010081: HB778_RS38705
subclass of: SO_0000673
so part of: HB778_RS38705
location: complement(190692..193664)
location: region:190692-193664:-1
so has part: feature:190692-193664:-1:exon

WP_183465776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190692-193664:-1:exon

HB778_RS38710
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38710
old locus tag: HB778_38850
so part of: sequence
location: complement(193764..195170)
location: region:193764-195170:-1
so has part: feature:193764-195170:-1:exon
subclass of: SO_0000010

position:193764:-1
position: 193764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195170:-1
position: 195170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193764-195170:-1:exon

HB778_RS38710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38710
old locus tag: HB778_38850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015932577.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MEKATQPTSGKGKRRRRGAKRDGGRVSREVTVAVSAPAGSRFKGYETILVRDLALSAEVVRYRRERWVTPTGETMVAPLPAGIIGGWGANLRRFILACHIQGQVTTERLTALLTGIGVDISKRQVVRLISEGLEAFAAEDRDVLRAGLATAPWITVDDTSARHAHQDGYTTQIGDRRFTAFRTGRSKSREAFLATLRAGHSDYFINEEALAYMRGRNLAGPVIARLAAAPHKAFADSAAWQAHLAALGLDQLAVEPNPVRIATEGAMWGAIRHHGFLGDTVVVSDDAGQFRIGDHALCWVHAERLVHKLIPVTPDQRQAVDIMRQLIWWFYRDLKSYQRAPCPRHAAALRARFERLFKRRTGYVMLDRLLARLHRRKHELLRVLDRPEIPLHTNGSENDIRTFVTKRKISGGTVSEAGKNARDVLLGLMKTCIKLDVSFFRYLGDRLGIPTQESIPPLPDLVRQAAQA
SIO_010081: HB778_RS38710
subclass of: SO_0000673
so part of: HB778_RS38710
location: complement(193764..195170)
location: region:193764-195170:-1
so has part: feature:193764-195170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193764-195170:-1:exon

HB778_RS38715
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38715
old locus tag: HB778_38855
so part of: sequence
location: 195593..196135
location: region:195593-196135:1
so has part: feature:195593-196135:1:exon
subclass of: SO_0000010

position:195593:1
position: 195593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196135:1
position: 196135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195593-196135:1:exon

HB778_RS38715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38715
old locus tag: HB778_38855
inference: COORDINATES: protein motif:HMM:NF012464.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MHGYAARAGLEIVGDYCDIAVSGRREGRPRLNALMASVRNREVDCVLVWKFDRFARSTRHLLIALEEFDHLGVRFISVQDQIDTASPMGRAMFTIIAAMAELESSLISERVTAGMQAARSRGKHLGRPSLPILLVEEIEVLAASADLSIRKIQEKIGGKASRGRVGEIVKRVRSAKASTG
SIO_010081: HB778_RS38715
subclass of: SO_0000673
so part of: HB778_RS38715
location: 195593..196135
location: region:195593-196135:1
so has part: feature:195593-196135:1:exon

WP_244662180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195593-196135:1:exon

HB778_RS38720
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: xopAA
locus tag: HB778_RS38720
old locus tag: HB778_38860
so part of: sequence
location: 196180..198267
location: region:196180-198267:1
so has part: feature:196180-198267:1:exon
subclass of: SO_0000010

position:196180:1
position: 196180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198267:1
position: 198267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196180-198267:1:exon

HB778_RS38720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: xopAA
locus tag: HB778_RS38720
old locus tag: HB778_38860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368375.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector XopAA
translation: MQIKTASLGPNAHPHDPVAGDGSSPADRSIEIEAGHGSGTLWPTDGTQARACPRPASETTMCLADLLSISSQRPSRPEVIPAIVQAGDDEGVPDLLPQPARSGASQPRLANPGEARDVESGLLMRDCSSRIAAFLGNLSVVQELRQFDDSEFVGKLRNELVTEPGCREPKTLLAAMGEKVDELRSHLDKQASTPEEAEFLAEARRYLEPVMTSFETDIHTLQHDASAAKRIYQGALTLLLYPLPLATLFTQKTGTYAAFNIASYTYTAIQLVSLMRRPTTDAKLFMKHAINRHSLVFFISLIYAVPTFYAKAAPLQRNAGFVAGAAAAQGAMMFGLRLGQDLMDSMRLRFNGAFNRRRDLPDGFRDAIEGVVGDLRAGLSNVNRSVGEFQKDRRITPHMDRQLTFFKQDLSRIVTGLERLVATGTRQESPVAASDDPPGPLEAVRRTLDASFANNPDLKGKLALATVAFAVLGSNIALMRNNGLALPDFIADAVVSSTFLLREALSPHVTHAGMNDSVSDTVGGMTIGLPFSVAAVMSGYMDDPRANPSGFIAGTVGYTAAYLLFGRVAGDVMSKGLMATSGALGWGQQQAIRLGRSAMALGFELVAGHRSPAAADVHDVAGVEMAGVPHEPLFFSPSQRASAERTLVGTLEQIGDEWYEARDEWEGESEGTAGRDDPWVDAPAELPMQPAPQSE
SIO_010081: HB778_RS38720
subclass of: SO_0000673
so part of: HB778_RS38720
location: 196180..198267
location: region:196180-198267:1
so has part: feature:196180-198267:1:exon

WP_183455378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196180-198267:1:exon

HB778_RS38725
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38725
old locus tag: HB778_38865
so part of: sequence
location: complement(198415..199821)
location: region:198415-199821:-1
so has part: feature:198415-199821:-1:exon
subclass of: SO_0000010

position:198415:-1
position: 198415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199821:-1
position: 199821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198415-199821:-1:exon

HB778_RS38725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38725
old locus tag: HB778_38865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015932577.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MEKATQPTSGKGKRRRRGAKRDGGRVSREVTVAVSAPAGSRFKGYETILVRDLALSAEVVRYRRERWVTPTGETMVAPLPAGIIGGWGANLRRFILACHIQGQVTTERLTALLTGIGVDISKRQVVRLISEGLEAFAAEDRDVLRAGLATAPWITVDDTSARHAHQDGYTTQIGDRRFTAFRTGRSKSREAFLATLRAGHSDYFINEEALAYMRGRNLAGPVIARLAAAPHKAFADSAAWQAHLAALGLDQLAVEPNPVRIATEGAMWGAIRHHGFLGDTVVVSNDAGQFRIGDHALCWVHAERLVHKLIPVTPDQRQAVDIMRQLIWWFYRDLKSYQRAPCPRRAAALRARFERLFKRRTGYVMLDRLLARLHRRKHELLRVLDRPEIPLHTNGSENDIRTFVTKRKISGGTVSEAGKNARDVLLGLMKTCIKLDVSFFRYLGDRLGIPTQESIPPLPDLVRQAAQA
SIO_010081: HB778_RS38725
subclass of: SO_0000673
so part of: HB778_RS38725
location: complement(198415..199821)
location: region:198415-199821:-1
so has part: feature:198415-199821:-1:exon

WP_244662198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198415-199821:-1:exon

HB778_RS38730
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: xopAI
locus tag: HB778_RS38730
old locus tag: HB778_38870
pseudo: true
so part of: sequence
location: 200256..201131
location: region:200256-201131:1
so has part: feature:200256-201131:1:exon
subclass of: SO_0000010

position:200256:1
position: 200256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201131:1
position: 201131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200256-201131:1:exon

HB778_RS38730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: xopAI
locus tag: HB778_RS38730
old locus tag: HB778_38870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003491086.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type III secretion system effector XopAI
SIO_010081: HB778_RS38730
subclass of: SO_0000673
so part of: HB778_RS38730
location: 200256..201131
location: region:200256-201131:1
so has part: feature:200256-201131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200256-201131:1:exon

HB778_RS38735
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38735
old locus tag: HB778_38875
so part of: sequence
location: complement(202045..203193)
location: region:202045-203193:-1
so has part: feature:202045-203193:-1:exon
subclass of: SO_0000010

position:202045:-1
position: 202045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203193:-1
position: 203193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202045-203193:-1:exon

HB778_RS38735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38735
old locus tag: HB778_38875
inference: COORDINATES: protein motif:HMM:NF018154.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MTDERTPTLHVIAGPNGAGKTTLYRNRLEKRYPDAEFVNADELALREFGHPAQTKSESARGQELAEERRRQLMAERKSLVTESTFSHPSKVDLVRDAKAAGYEVVLYHVNVRSPNLSVMRVADRVNKGGHPVPEDKIRQRYDRNQPLIREAAKLADRAYIFDNSQLGKPHELSVILERGKAIRASENVPAWARMLYKDELQNFSQSRQHRAAASFADAKAIAERALGQESRTFIPRPNSEYSGKVIGETDLHLVQQIGARSAIAHFRDKLGRPPRVGDDVEIRYGKDGAATLRSAREASEAKDRADAFRSLPAKQAVAKYPDLAPSYAYVRAVEARVAASQPASAAGVAKKVREDLAGRIERGETLPDIRRKDQDREQDQGR
SIO_010081: HB778_RS38735
subclass of: SO_0000673
so part of: HB778_RS38735
location: complement(202045..203193)
location: region:202045-203193:-1
so has part: feature:202045-203193:-1:exon

WP_183455379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202045-203193:-1:exon

HB778_RS38740
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38740
old locus tag: HB778_38880
so part of: sequence
location: complement(203190..203615)
location: region:203190-203615:-1
so has part: feature:203190-203615:-1:exon
subclass of: SO_0000010

position:203190:-1
position: 203190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203615:-1
position: 203615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203190-203615:-1:exon

HB778_RS38740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38740
old locus tag: HB778_38880
inference: COORDINATES: protein motif:HMM:NF023331.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTKTKPSPNSPARQPKIDFASVKLSSALVNLAREDAPVFSRSIGGQLEHWARIGRAIEQAPGFTLDRVRAALEGRFDPALLADQERTHYYDLLDDVMLAPSSEETAAMALLGRSAGAAGYDAHGRLVRVAGDGNTVVIEE
SIO_010081: HB778_RS38740
subclass of: SO_0000673
so part of: HB778_RS38740
location: complement(203190..203615)
location: region:203190-203615:-1
so has part: feature:203190-203615:-1:exon

WP_183455380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203190-203615:-1:exon

HB778_RS38745
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38745
old locus tag: HB778_38885
so part of: sequence
location: complement(203743..204144)
location: region:203743-204144:-1
so has part: feature:203743-204144:-1:exon
subclass of: SO_0000010

position:203743:-1
position: 203743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204144:-1
position: 204144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203743-204144:-1:exon

HB778_RS38745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38745
old locus tag: HB778_38885
inference: COORDINATES: protein motif:HMM:NF019069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MTNQVTTMKKLWILMVASFIAGGTGSVAAQETMQGDQKDACEALLCLVAGSAPSECTPPLRRYFSIRADKPSDERKKRRNFLKMCPSGQDDLVESIVKGKCNSAYQDCSTPGGNSGGGAAGTQPGNGQQTQAR
SIO_010081: HB778_RS38745
subclass of: SO_0000673
so part of: HB778_RS38745
location: complement(203743..204144)
location: region:203743-204144:-1
so has part: feature:203743-204144:-1:exon

WP_183465778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203743-204144:-1:exon

HB778_RS38750
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38750
old locus tag: HB778_38890
so part of: sequence
location: 204378..205526
location: region:204378-205526:1
so has part: feature:204378-205526:1:exon
subclass of: SO_0000010

position:204378:1
position: 204378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205526:1
position: 205526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204378-205526:1:exon

HB778_RS38750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38750
old locus tag: HB778_38890
inference: COORDINATES: protein motif:HMM:NF025079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4158 domain-containing protein
translation: MTGLHISREDLIGRWSLSYSDIEFVNGKPVPARLGLAVQLKFFAAHGFFVQDHASIPADSVSWLAEQLGVGSGAMTEYDFSGRTARRHCAEILQYLGFRRLKRCDREELTLWIAGELCPTGQSVGAMLEQVFLWCRDRCIYGPSHKELERLVRSQRQHYLDDWLTGVSARLSASTVALLEASIAEADGQTGFNTMRGDAGQASLDNILSMTAKLAFIQKLDLPRDMLSATGKAWVEQIVRRVAGEKAWEMRRHPSAKQIGLYAIYLSSRQAQLTDAMVDLLLETVHKIGTRSKRKVVGDIAKDIERVYGKERLLVEIASASIDEPAGRVCDVIFPIVGKDKLAAIVKESQAKGALDRRIYKVMRYVTGADYRAVGVCRRVLS
SIO_010081: HB778_RS38750
subclass of: SO_0000673
so part of: HB778_RS38750
location: 204378..205526
location: region:204378-205526:1
so has part: feature:204378-205526:1:exon

WP_244662181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204378-205526:1:exon

HB778_RS38755
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38755
old locus tag: HB778_38895
so part of: sequence
location: 205764..207170
location: region:205764-207170:1
so has part: feature:205764-207170:1:exon
subclass of: SO_0000010

position:205764:1
position: 205764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207170:1
position: 207170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205764-207170:1:exon

HB778_RS38755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38755
old locus tag: HB778_38895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015932577.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MEKATQPTSGKGKRRRRGAKRDGGRVSREVTVAVSAPAGSRFKGYETILVRDLALSAEVVRYRRERWVTPTGETMVAPLPAGIIGGWGANLRRFILACHIQGQVTTERLTALLTGIGVDISKRQVVRLISEGLEAFAAEDRDVLRAGLATAPWITVDDTSARHAHQDGYTTQIGDRRFTAFRTGRSKSREAFLATLRAGHSDYFINEEALAYMRGRNLAGPVIARLAAAPHKAFADSAAWQAHLAALGLDQLAVEPNPVRIATEGAMWGAIRHHGFLGDTVVVSDDAGQFRIGDHALCWVHAERLVHKLIPVTPDQRQAVDIMRQLIWWFYRDLKSYQRAPCPRHAAALRARFERLFKRRTGYVMLDRLLARLHRRKHELLRVLDRPEIPLHTNGSENDIRTFVTKRKISGGTVSEAGKNARDVLLGLMKTCIKLDVSFFRYLGDRLGIPTQESIPPLPDLVRQAAQA
SIO_010081: HB778_RS38755
subclass of: SO_0000673
so part of: HB778_RS38755
location: 205764..207170
location: region:205764-207170:1
so has part: feature:205764-207170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205764-207170:1:exon

HB778_RS38760
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38760
old locus tag: HB778_38900
so part of: sequence
location: 207229..209019
location: region:207229-209019:1
so has part: feature:207229-209019:1:exon
subclass of: SO_0000010

position:207229:1
position: 207229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209019:1
position: 209019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207229-209019:1:exon

HB778_RS38760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38760
old locus tag: HB778_38900
inference: COORDINATES: protein motif:HMM:NF033527.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MLPSLLSVLEFRSNNTAWRPVLVALDWIRSKVDDGCRFVPMQDVPFDEVIPARWRSSVNDDGCVNRISYELCVLTQLRDRIRSKEIWVVGADRYRNPDDDLPRDFEIRRDAYYTVLNLTPNARAFTAGIRKELEHELLLLNETIPRNGKVRLLWRGENRISITPFKPLPEPKGLEAIKGEIGQRWSMTGLLDVLKEAALDTGLLESFETSASRVALSREALDRRLLLCLYGLGTNAGLKRIAGATPDVSYDELLHVHRRFIHAPALREACARVANATLAIRNAAVWGDAGTACASDSTKFGAWDRNLMTEWHARYGGRGVMIYWHVEKRATCVYSQLKRCSSSEVASMIEGVLRHCTDMEIQRQYVDSHGQSAVGFAFCRLLGFELAPRLKAIARQKLAIPEASLRTRLPNLLPILSSAIDWEEIEQQYDEMVKYTAAMQTRTADPEAILRRFARAEVMHPTYKALSELGRAVKTIFLCRYLRQEAFRREIHEGLNVVENWNSANGFVFFGKGGEIATNRIDEQEISALALHLLQASLVYVNTRMLQTVLVEPKWAARMAPEDYRGLTPLIYSHVNPYGRFDLDLNSRIDFDRLAA
SIO_010081: HB778_RS38760
subclass of: SO_0000673
so part of: HB778_RS38760
location: 207229..209019
location: region:207229-209019:1
so has part: feature:207229-209019:1:exon

WP_244662199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207229-209019:1:exon

HB778_RS38765
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38765
old locus tag: HB778_38905
so part of: sequence
location: 209035..210516
location: region:209035-210516:1
so has part: feature:209035-210516:1:exon
subclass of: SO_0000010

position:209035:1
position: 209035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210516:1
position: 210516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209035-210516:1:exon

HB778_RS38765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38765
old locus tag: HB778_38905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKIAESCLNVLYQHGLSSAQFQFYFERAKHDLLANDMACDAIVAEVMQSMDDHPDVATLFGLLLDEARMGIENDSPYGKAFLENAEKAIKARIAAGAGEPLHGLKIAGLYRRASLPVPDILMLDPVGESPAEEIPMPDLDGALAVLAAEVEAEGGGAYEFFSGLDEMSAGMPEEFKAEFVHHLLSLDNPFLERCALYWLVSGTSLTGEAVAAGLRERLMRGKLEPETLSYLPIIRGWLSASAARAAIDDIGKLALRQGLADVSKQNRAEPIVSDILATTADGVGAQGLTIVGKLQAQTFVAMILLKTGYGIKDAFVIRCRSKREATSIVSYARQEANSVRIDRMSAELLLEAALADGIENGHPPAPAFIDVMEACSLSQLRPQERDLQALLDHVDPQKEIQNATAAQLDRMLRNEPALDALVPFTDSWFEDTGETRDIIRGSRSARTVEKESGPFSKADETSGQGDFCKPRSFSNRLKRSDCQKHWQPQPLH
SIO_010081: HB778_RS38765
subclass of: SO_0000673
so part of: HB778_RS38765
location: 209035..210516
location: region:209035-210516:1
so has part: feature:209035-210516:1:exon

WP_244662182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209035-210516:1:exon

HB778_RS38770
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38770
old locus tag: HB778_38910
so part of: sequence
location: 210744..211295
location: region:210744-211295:1
so has part: feature:210744-211295:1:exon
subclass of: SO_0000010

position:210744:1
position: 210744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211295:1
position: 211295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210744-211295:1:exon

HB778_RS38770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38770
old locus tag: HB778_38910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477317.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MARIGYARTSTTDQNLAAQIAALRNAGCEVIREEQKSGASLEGRPQLMTILDFIHAGETLVITRIDRLARSLRDLQVIVDRLKAKGAHLVATEQPVDTSTAAGKAFFDMLGVFAEFETNLRRERQAEGIAAARKRGIYKGRPPKIDRAEILLRLQKGQGPSKIARDLAISRGTVYQVRNGASE
SIO_010081: HB778_RS38770
subclass of: SO_0000673
so part of: HB778_RS38770
location: 210744..211295
location: region:210744-211295:1
so has part: feature:210744-211295:1:exon

WP_183454862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210744-211295:1:exon

HB778_RS38775
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38775
old locus tag: HB778_38915
so part of: sequence
location: 211292..211717
location: region:211292-211717:1
so has part: feature:211292-211717:1:exon
subclass of: SO_0000010

position:211292:1
position: 211292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211717:1
position: 211717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211292-211717:1:exon

HB778_RS38775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38775
old locus tag: HB778_38915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKANRITRLTSAACEQIQARMLEACRKIASDHGLVIESTGWRGLEPGFSFEPAFRISIPAPDGKTLNLDKEMFALLAEQYGLEAAHFKREFIAGGERFRITGIDPRRPKYPISVERIPDRRGFKFTADNVAMLLKAQVEP
SIO_010081: HB778_RS38775
subclass of: SO_0000673
so part of: HB778_RS38775
location: 211292..211717
location: region:211292-211717:1
so has part: feature:211292-211717:1:exon

WP_183455382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211292-211717:1:exon

HB778_RS38780
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38780
old locus tag: HB778_38920
so part of: sequence
location: 212255..213841
location: region:212255-213841:1
so has part: feature:212255-213841:1:exon
subclass of: SO_0000010

position:212255:1
position: 212255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213841:1
position: 213841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212255-213841:1:exon

HB778_RS38780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38780
old locus tag: HB778_38920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018428333.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavin monoamine oxidase family protein
translation: MLPPQLSRRDLLTMIGALAGSEAMYQAMTTLGFAQESPYKGPIKLDGDPKGASVLVLGGGLAGMVAAYELSKVGYKVQVLEYREKAGGRCWSLRGGDNYTELGGFEQECKFDEGLYINPGPWRIPYHHHAVLDYCKRLGVKLEAFVQVNHNAYLHSVKAFEGKPQRYRHVSADFNGHVAELLSKVTKQGGLDQAVSTEDREKLLEALQSWGALDENYAYVAGTHSSERRGFDIEPGGGQMPLAKPSQPIGLSDIVQSGLWSSLSTGSLYDYQTTMLQPVGGMDMIARAFEREVGSLTKYNVKVTEIDQDDESVTIRYEDARKGGEAQTATADWCICTVPFSVLSQIKTKVSTETKAAIDNLPYGAAIKVGLQFKRRFWEEDEHIYGGITYTDLPNTLISYPSTDYHSPGKGVLLGAFSLEAWAYEFTSLPPEERIQKALEYGAQIHPQYKDEFDNGVAVGWHRVPWTLGCYGEWTEEKRKEHYHAASSIDGRIAMAGEHISYMPAWMEGAILSSLDAIGRLHQRVVSG
SIO_010081: HB778_RS38780
subclass of: SO_0000673
so part of: HB778_RS38780
location: 212255..213841
location: region:212255-213841:1
so has part: feature:212255-213841:1:exon

WP_183455383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212255-213841:1:exon

HB778_RS38785
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38785
old locus tag: HB778_38925
so part of: sequence
location: 213893..214297
location: region:213893-214297:1
so has part: feature:213893-214297:1:exon
subclass of: SO_0000010

position:213893:1
position: 213893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214297:1
position: 214297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213893-214297:1:exon

HB778_RS38785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38785
old locus tag: HB778_38925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011348484.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MNRITSFAATVAVAAFAAFPVFGQSSDSTGFGNASKIQPRDGAGIYAAICRGCHMPEGVGAVGAGKYPALAKNEKLEAGAYPVVMVVKGQKAMPPLGSYLDDEQVTAVVNYIRTNFGNNYTDAVTVEDVQAARP
SIO_010081: HB778_RS38785
subclass of: SO_0000673
so part of: HB778_RS38785
location: 213893..214297
location: region:213893-214297:1
so has part: feature:213893-214297:1:exon

WP_183455384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213893-214297:1:exon

HB778_RS38790
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38790
old locus tag: HB778_38930
so part of: sequence
location: complement(214940..215632)
location: region:214940-215632:-1
so has part: feature:214940-215632:-1:exon
subclass of: SO_0000010

position:214940:-1
position: 214940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215632:-1
position: 215632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214940-215632:-1:exon

HB778_RS38790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38790
old locus tag: HB778_38930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019856484.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MAEATRRIREERDVQRMPVDRELDHLPPEARWREWMNRVEATIFAASEPVNRETLGRIVGKSCSIDLLIDDIREELRGRPYDLVAVAGGFRHLTRPAYADAIRSAFGTAGGGNGRAVDLTQSDVLVLMCIAYFQPITRGELSSFFGKEISRDLIGHLRGAKLIASGPRSPTPGAPYTYVTTKEFLLEFGLDTLRDLPDCEALEDAGLLSKEKLLAGDIMPGLSDDEEEHA
SIO_010081: HB778_RS38790
subclass of: SO_0000673
so part of: HB778_RS38790
location: complement(214940..215632)
location: region:214940-215632:-1
so has part: feature:214940-215632:-1:exon

WP_183455385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214940-215632:-1:exon

HB778_RS38795
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38795
old locus tag: HB778_38935
so part of: sequence
location: complement(215638..216534)
location: region:215638-216534:-1
so has part: feature:215638-216534:-1:exon
subclass of: SO_0000010

position:215638:-1
position: 215638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216534:-1
position: 216534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215638-216534:-1:exon

HB778_RS38795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38795
old locus tag: HB778_38935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878430.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1403 family protein
translation: MISSSSCSDPTIGALDAVVRRQQRWAGAWRQRLALAAAAVTAKQVGRVEDESQLRDAVLLTRPGDFLSVGPAGLLLLAWRRLAARPAEELLTKRSLAAMLEEFGYARDDEAVSDLADELRRLSASTGMVGMLTGAFMAAERHGFGRALGAWLADALLAQRLGWAHAVPLLGAEKALGVGKGRPRRPATADQAAGAETEADLAKSLLAAQARAALRAIDLSAELERRAERLLVVAPKLRAKAADMVVERLLSDDALVASRGDKKTGMSDRGLRRLFDRLVELGAVRELSGRPTFRIYGL
SIO_010081: HB778_RS38795
subclass of: SO_0000673
so part of: HB778_RS38795
location: complement(215638..216534)
location: region:215638-216534:-1
so has part: feature:215638-216534:-1:exon

WP_183465779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215638-216534:-1:exon

HB778_RS38800
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38800
old locus tag: HB778_38940
so part of: sequence
location: complement(216547..217641)
location: region:216547-217641:-1
so has part: feature:216547-217641:-1:exon
subclass of: SO_0000010

position:216547:-1
position: 216547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217641:-1
position: 217641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216547-217641:-1:exon

HB778_RS38800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38800
old locus tag: HB778_38940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477253.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1595 family transposase
translation: MPEILAALSNIRTVEEMIAAFRDEQHSRRLLESMVWPDGRICPACGYKRSIALAGRDTGKRRARPGLYQCSSGDCRFQFTVTTHTPLHSTKLPMRVWLKAMWLLLQSDKGLSSVRLAEALGVSQPTAWRMGHALRLMVARENMLVGTVEIDHFHLGGSPRKRPDDPPPGRGRKGQANTDKTPVMAMVQRPTDVTPGAPSGDARAAVVTSLSARASERVTEAQIELGAHLMSDEWKAFMAIGESFTKHETVKHSSGEYVRDAVHVNSVEGFNSRVRRTIAGVFHHISPQHADLYFHEIGFRWSQRVVTGNVIRKTRHGRESVRTLWSRVPPALQLTNVFRTATGRQMRRSPHGGIIIKSAVAVFG
SIO_010081: HB778_RS38800
subclass of: SO_0000673
so part of: HB778_RS38800
location: complement(216547..217641)
location: region:216547-217641:-1
so has part: feature:216547-217641:-1:exon

WP_183465780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216547-217641:-1:exon

HB778_RS38805
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38805
old locus tag: HB778_38945
so part of: sequence
location: complement(217733..218326)
location: region:217733-218326:-1
so has part: feature:217733-218326:-1:exon
subclass of: SO_0000010

position:217733:-1
position: 217733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218326:-1
position: 218326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217733-218326:-1:exon

HB778_RS38805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38805
old locus tag: HB778_38945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603269.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPRTFAYVRVSTTGQTTENQIQEIQAAGFHIEPRRIVTETISGSIAIARRRGFIRLMDKLEAGDVLIVTKLDRLGRDAIDVSTTVGKLEELGVRVHCLALGGVDLASSAGKMTMNVINAVAQFERDLLIERTQSGLKRARSEGKTLGRPARLNETRKHDVLQGLANGMSVSALARKFQTSRQTIMRVRDDSSRSVQP
SIO_010081: HB778_RS38805
subclass of: SO_0000673
so part of: HB778_RS38805
location: complement(217733..218326)
location: region:217733-218326:-1
so has part: feature:217733-218326:-1:exon

WP_183465506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217733-218326:-1:exon

HB778_RS38810
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38810
old locus tag: HB778_38950
so part of: sequence
location: 218481..221456
location: region:218481-221456:1
so has part: feature:218481-221456:1:exon
subclass of: SO_0000010

position:218481:1
position: 218481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221456:1
position: 221456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218481-221456:1:exon

HB778_RS38810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38810
old locus tag: HB778_38950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501082.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MARRKLLKIQDRQELFGVPTDEDSLIRHYTLSPVDRLEIEVRRRKHNQLGFAAQLCMMRYPGRTLMAAEIPPRAMLNYIAEQLDADPESFSSYARREPTRLEHVSHLLAYLGMRTAAAPDRRAALMSAIETAATTDKGSPIAKAIVTTMRERNVVLPTPDTIERIGLAARAIARRRAEAALISGFSPEQLQSLDDLLKVDPAIAQTRFYWLRSAPDAPGASNLVAMMERLSFIRTLDIDPRLQGRIHSGRWDQMIREGDVTPAWLAADFNASRRRATIVAQVIKLGHKLTDDAITMFIKLIGRLFSQANNRKKQRHAETRKETAKVLRLFLDTISALQAANDNDEDAIETINRHVGWHRLLQVKPALEAMVENGDPDPLLVAVEQYANVRKYAALFLRTFAFRSARRNDPLLAAIETLKSLYEDGRRSLPDRVPVAHLGATARKLIFSGSKPDRRLYEIATLAALRERLRSADVWVEGSRAFRPMDEHLMPRPAFSDLKETDQLGLGVQRDGAAWLAQMQQLLDFNLKRLAHRARNGKLEGVRLEAGTLLVTPLASEVPAAAEELNLELNDMYPLVEVPDLLREVHEWTGFADQFTHVRTGDMPQNIAAMLAGTLADATNLGPKRMAGASKGISAHQIGWMRMFHARTETYRAAQASVTDAHARHPHALLWGNGTTASSDGQFFRASDRAAGRGDINLHYGSEPGTKFYSHLSDQYGYFSILPISPTESEAAYVLDGLFDHDTFLDIDEHFTDTGGASDHVFALFALIGKRFAPRLRNLKDRKFHTFEKADIHPALADHIGVQINTALIMEYWDDLLHLAASIRTRAVAPSTILKKLAASPNPSQLAKALRELGRIERSLFMIEWYSSPALRRRCQAGLNKGEAAHKLKRAVFFHERGEIRDRSFESQAFRASGLNLVVSAIVHWNTVYLSRAVAHLRQNGRNIPDILLKHVSPLSWEHINLTGIYAWDAAPDLPEGFRPLRLPTKLLWAA
SIO_010081: HB778_RS38810
subclass of: SO_0000673
so part of: HB778_RS38810
location: 218481..221456
location: region:218481-221456:1
so has part: feature:218481-221456:1:exon

WP_183465396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218481-221456:1:exon

HB778_RS38815
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38815
old locus tag: HB778_38955
so part of: sequence
location: 221583..222422
location: region:221583-222422:1
so has part: feature:221583-222422:1:exon
subclass of: SO_0000010

position:221583:1
position: 221583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222422:1
position: 222422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221583-222422:1:exon

HB778_RS38815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38815
old locus tag: HB778_38955
EC number: 1.13.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007689226.1
GO function: GO:0051213 - dioxygenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class III extradiol ring-cleavage dioxygenase
translation: MTGEFRRNFDVLEKSLVDMRAELGSAPKAVLVISGHWEETGFAISSGVKPGMVYDYHGFPEYLYNITYNAPGSPELANHVQRLLRASGIEAPLDPTRGYDHGTFSIMKPLYPEEDIPVVQLSLDMGYDPALHIKVGRALAPLRAEGVLIIGSGLSYHNLSAMRGTGGYEPSRRFDAWLQETLTHCPSEKRTERLIEWERAPAARAAHPREDHLIPLMVVVGAAEDEPGGTIYHQKDFAGGLTASSFRFGLAPGLFNANIFVIGFDASRAKRAIPSGRFV
SIO_010081: HB778_RS38815
subclass of: SO_0000673
so part of: HB778_RS38815
location: 221583..222422
location: region:221583-222422:1
so has part: feature:221583-222422:1:exon

WP_244662183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221583-222422:1:exon

HB778_RS38820
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38820
old locus tag: HB778_38960
so part of: sequence
location: 222444..223058
location: region:222444-223058:1
so has part: feature:222444-223058:1:exon
subclass of: SO_0000010

position:222444:1
position: 222444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223058:1
position: 223058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222444-223058:1:exon

HB778_RS38820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38820
old locus tag: HB778_38960
inference: COORDINATES: protein motif:HMM:NF033564.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MRVAPLPGTLLSLFSQIPDPRRGQGQMYPQAPILLFTVLAMLAGAVSYRQVHAFIRIHLVRLNGVFGVSVRKAPAYSTVRFILRGLDGAEVERVFRQHAAGLPTPPAQEPDDAMPDDVMPACVAIDGKTLRGSFDAFNDRKAAHLLSAFASDGQIILGHLAIDEKSNEIPAAQDLIATLGLTGRMFTLDAMHAQKNLRRSPGHG
SIO_010081: HB778_RS38820
subclass of: SO_0000673
so part of: HB778_RS38820
location: 222444..223058
location: region:222444-223058:1
so has part: feature:222444-223058:1:exon

WP_183456831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222444-223058:1:exon

HB778_RS38825
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38825
old locus tag: HB778_38965
so part of: sequence
location: 223018..223599
location: region:223018-223599:1
so has part: feature:223018-223599:1:exon
subclass of: SO_0000010

position:223018:1
position: 223018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223599:1
position: 223599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223018-223599:1:exon

HB778_RS38825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38825
old locus tag: HB778_38965
inference: COORDINATES: protein motif:HMM:NF033564.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MPKKTFAVALATGNHLLVQLKENQPNLDDEIRAIVDSRTPSDTASSRDTVRSRQEDRTVDVFPVGKALVDSEWQPFVKTIIRVTRQTWLRSAATGMWQPRGEVSYYISSEQGLPAKTWAAIIRGHWGIENRNHYVRDVSCDEDRSRIRDNPGIMARARSFALNILRHNGTKNVAQALWNGALSLDLILAYKAL
SIO_010081: HB778_RS38825
subclass of: SO_0000673
so part of: HB778_RS38825
location: 223018..223599
location: region:223018-223599:1
so has part: feature:223018-223599:1:exon

WP_183455035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223018-223599:1:exon

HB778_RS38830
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38830
old locus tag: HB778_38970
so part of: sequence
location: 223660..224040
location: region:223660-224040:1
so has part: feature:223660-224040:1:exon
subclass of: SO_0000010

position:223660:1
position: 223660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224040:1
position: 224040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223660-224040:1:exon

HB778_RS38830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38830
old locus tag: HB778_38970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018241093.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione S-transferase N-terminal domain-containing protein
translation: MTNETFKPIVYLKENCPFCLKVRLFLLESGLASEVESRDFVPGTEQEEKIRTELLPHLDKVSFPSAQLEPGRYVAESDDIVAFFAAKAGRDPAGMPVYRNYVDGVFAMSMKLWKENQELKKAVSAA
SIO_010081: HB778_RS38830
subclass of: SO_0000673
so part of: HB778_RS38830
location: 223660..224040
location: region:223660-224040:1
so has part: feature:223660-224040:1:exon

WP_183465782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223660-224040:1:exon

HB778_RS38835
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38835
old locus tag: HB778_38975
so part of: sequence
location: 224068..224466
location: region:224068-224466:1
so has part: feature:224068-224466:1:exon
subclass of: SO_0000010

position:224068:1
position: 224068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224466:1
position: 224466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224068-224466:1:exon

HB778_RS38835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38835
old locus tag: HB778_38975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018497208.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DoxX family protein
translation: MLDTVKWTPRVLAILRIMTALLFLEHATMKFLQFPAAIPGVSYPLPAIMIVAGTIEVITALLMFVGFYTRLAAFIASGEMAAAYFMAHASQGFWPALNFGEPAILFCFIFLYLALAGGGAWALENARRPAMA
SIO_010081: HB778_RS38835
subclass of: SO_0000673
so part of: HB778_RS38835
location: 224068..224466
location: region:224068-224466:1
so has part: feature:224068-224466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224068-224466:1:exon

HB778_RS38840
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38840
old locus tag: HB778_38980
pseudo: true
so part of: sequence
location: 224526..225427
location: region:224526-225427:1
so has part: feature:224526-225427:1:exon
subclass of: SO_0000010

position:224526:1
position: 224526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225427:1
position: 225427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224526-225427:1:exon

HB778_RS38840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38840
old locus tag: HB778_38980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160333.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NADP-dependent oxidoreductase
SIO_010081: HB778_RS38840
subclass of: SO_0000673
so part of: HB778_RS38840
location: 224526..225427
location: region:224526-225427:1
so has part: feature:224526-225427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224526-225427:1:exon

HB778_RS38845
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38845
old locus tag: HB778_38985
so part of: sequence
location: complement(225693..226964)
location: region:225693-226964:-1
so has part: feature:225693-226964:-1:exon
subclass of: SO_0000010

position:225693:-1
position: 225693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226964:-1
position: 226964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225693-226964:-1:exon

HB778_RS38845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38845
old locus tag: HB778_38985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLSHLAEPALEFGSGLRHPDIRFGIMDYGPFDVHIDGASRRIKLGIVGSADTVEGTARWIEACSDGFEAKSSRQANLFPRFPGLRNDETFRCEFTTSSELQRILPTKEIGRLVAIPGQREVTREVVSTIVNEIAVLAERTALPDVVLIALPVEIIERTVNAREATGENDDEVDAEAPVEAEPGSELDFRGMLKAACMRLRIPIQLMWPTTFDPSYRIPRKLKENSDRRMQDPATIAWNLITAIYYKAGGLPWRLARDARELRTSFVGLSFYRSVEGEHMHTSTAQMFDERGEGLILRGGRMVESEEDRSPHLTAEDAYALLRDSLKVFRGQHGHYPARVVLHKTSRFDRNELDGFHKAIDERDIDYADFVWIQKSMTRLYRLGVYPPLRGSLLRFSKDQALLYTRGSVDFFRTYPGMYVRGR
SIO_010081: HB778_RS38845
subclass of: SO_0000673
so part of: HB778_RS38845
location: complement(225693..226964)
location: region:225693-226964:-1
so has part: feature:225693-226964:-1:exon

WP_244662184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225693-226964:-1:exon

HB778_RS38850
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38850
old locus tag: HB778_38990
so part of: sequence
location: complement(226961..228301)
location: region:226961-228301:-1
so has part: feature:226961-228301:-1:exon
subclass of: SO_0000010

position:226961:-1
position: 226961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228301:-1
position: 228301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226961-228301:-1:exon

HB778_RS38850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38850
old locus tag: HB778_38990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010123961.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4365 domain-containing protein
translation: MAKKIGRTDIIGERGIAYIRQVVLSMGFMFYETGGVEAGIDGFIELRDETTGAVSNLLLQVQGKATERTRLQAETDTTFEFPVTEADIQYWMHGTAPVLLLVVKLDEGKAYWKSIKEWFSDIEHLKSRKVVFDKRSDFFSVDAKAAIVAVATSAKPGSTGPSVRLHESLLVNLLEIGFAPKIYWAPTHHHTDKSFGAALRELDSKASSEWIVRSNAVLSFNDLDKWPWNKICDVSAMEVFDTSEWSGSDDVDRVRDFVALLNRAIGDFVRPDLRRDRDSGILYFVKPRNRGKLNYAYRSLRNLTTRRVVKGYGRQRDHPGKPAYFRHSGFRPHFVRYDQKWYVEVSPTYHFSRDGWEPDFKAGEHLKKIKELENNAAVMGQFVMWQAFLTTHRTGDLLGEAYPHLRFAPLESFELDVGVPDQLWTAQESNPTSPLFDFDKMQEGTE
SIO_010081: HB778_RS38850
subclass of: SO_0000673
so part of: HB778_RS38850
location: complement(226961..228301)
location: region:226961-228301:-1
so has part: feature:226961-228301:-1:exon

WP_183465783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226961-228301:-1:exon

HB778_RS38855
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38855
old locus tag: HB778_38995
so part of: sequence
location: complement(228457..228999)
location: region:228457-228999:-1
so has part: feature:228457-228999:-1:exon
subclass of: SO_0000010

position:228457:-1
position: 228457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228999:-1
position: 228999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228457-228999:-1:exon

HB778_RS38855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38855
old locus tag: HB778_38995
inference: COORDINATES: protein motif:HMM:NF024605.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MARAALVVGVSGVGKSYVIGRCAANAGFIHIQASDVLRQAKADLLARTVDREELRKGQVLDNQTLLIEAFGKLRAQESRPIVFDAHNIIDTDNGYVEIPLEVFRAIDLYVVIALSGDPESILARRTRDTGRVRPDRTSGQIAEYQSLVIALAEKHARELGVPFRLVGSGDEEAFAQAILA
SIO_010081: HB778_RS38855
subclass of: SO_0000673
so part of: HB778_RS38855
location: complement(228457..228999)
location: region:228457-228999:-1
so has part: feature:228457-228999:-1:exon

WP_183455401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228457-228999:-1:exon

HB778_RS38860
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38860
old locus tag: HB778_39000
so part of: sequence
location: 229272..229655
location: region:229272-229655:1
so has part: feature:229272-229655:1:exon
subclass of: SO_0000010

position:229272:1
position: 229272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229655:1
position: 229655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229272-229655:1:exon

HB778_RS38860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38860
old locus tag: HB778_39000
inference: COORDINATES: protein motif:HMM:NF016178.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ASCH domain-containing protein
translation: MAERLADKVLSEQKSTTIRYDRDRVEYPAGPVLPLYAAEERGPQDEYRCLACLRVLSVRYSTFNGLTEADARSDGFSSLDELLGALQRFYGRIMPEDTVCIYEFALEPTATKRNTRGRNVVLESPSV
SIO_010081: HB778_RS38860
subclass of: SO_0000673
so part of: HB778_RS38860
location: 229272..229655
location: region:229272-229655:1
so has part: feature:229272-229655:1:exon

WP_183465784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229272-229655:1:exon

HB778_RS38865
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38865
old locus tag: HB778_39005
so part of: sequence
location: complement(229652..231145)
location: region:229652-231145:-1
so has part: feature:229652-231145:-1:exon
subclass of: SO_0000010

position:229652:-1
position: 229652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231145:-1
position: 231145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229652-231145:-1:exon

HB778_RS38865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38865
old locus tag: HB778_39005
inference: COORDINATES: protein motif:HMM:NF025054.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MKLLIDTNVIIQLEDAKEIKAQFADLQRKCQEHGISVFVHEASLEDIERDPDKDRRRVTLSKVKKFRQLKGVHVPSEGELARLYGKLPKPNDVCDAKMLHAVADGVVELFVTEDDGIHRRAKAAGLSEQVLTVADAVAWLKQAYEPDQVFLPSVEYAKAYNIDFKDEIFDDLAADYVGFREVWVPKCKEEHRDCWVIKDGGKLAGIVIRKDETHAAAGTQYAAAKILKICTFKVAQGHRGQKLGEQLLKQVLWHCQRNDYDLTYVTAFPKQEGLIRLLEEYGFEKTKTLAKGELVFEKPMGSGPLAAGTDKLKTVKKNYPRFSDDAAVSKFVVPIQPGYHRKLFPEATAPTTGSTGAPGGKPGNTIKKVYICHAPTNAMQPGDLLFFYMTKSPSYGSQSMTSVGVVESVRWTLDVNEVRKWTAKRSVFSDAELAHWVAGSRPLKVIDFLLIGHVEPTVPLTDLLGYGVLPSWPQSINKIPESAYTKLKPLLKLGFKF
SIO_010081: HB778_RS38865
subclass of: SO_0000673
so part of: HB778_RS38865
location: complement(229652..231145)
location: region:229652-231145:-1
so has part: feature:229652-231145:-1:exon

WP_183465785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229652-231145:-1:exon

HB778_RS38870
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38870
old locus tag: HB778_39010
so part of: sequence
location: complement(231142..231585)
location: region:231142-231585:-1
so has part: feature:231142-231585:-1:exon
subclass of: SO_0000010

position:231142:-1
position: 231142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231585:-1
position: 231585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231142-231585:-1:exon

HB778_RS38870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38870
old locus tag: HB778_39010
inference: COORDINATES: protein motif:HMM:NF016178.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ASCH domain-containing protein
translation: MNNLDLFRHDFVLSIKPEYATKIVSGQKKVELRRRFPYGTVTGAVMYIYASAPIQAVIGYATISTVEELPVESIWANYNDVAFIERDDFDAYYAERTSGFVIKLQDPVAVTEPVPLSILKERLGFTPPQSFAYADDAFRQLIRGSER
SIO_010081: HB778_RS38870
subclass of: SO_0000673
so part of: HB778_RS38870
location: complement(231142..231585)
location: region:231142-231585:-1
so has part: feature:231142-231585:-1:exon

WP_183455396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231142-231585:-1:exon

HB778_RS42445
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42445
pseudo: true
so part of: sequence
location: 232008..>232157
location: region:232008-232157:1
so has part: feature:232008-232157:1:exon
subclass of: SO_0000010

position:232008:1
position: 232008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232157:1
position: 232157
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232008-232157:1:exon

HB778_RS42445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012047434.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
SIO_010081: HB778_RS42445
subclass of: SO_0000673
so part of: HB778_RS42445
location: 232008..>232157
location: region:232008-232157:1
so has part: feature:232008-232157:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232008-232157:1:exon

HB778_RS38875
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38875
old locus tag: HB778_39015
pseudo: true
so part of: sequence
location: <232153..>232286
location: region:232153-232286:1
so has part: feature:232153-232286:1:exon
subclass of: SO_0000010

position:232153:1
position: 232153
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:232286:1
position: 232286
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232153-232286:1:exon

HB778_RS38875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38875
old locus tag: HB778_39015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010659343.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alanine dehydrogenase
SIO_010081: HB778_RS38875
subclass of: SO_0000673
so part of: HB778_RS38875
location: <232153..>232286
location: region:232153-232286:1
so has part: feature:232153-232286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232153-232286:1:exon

HB778_RS38880
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38880
old locus tag: HB778_39020
so part of: sequence
location: complement(232432..233118)
location: region:232432-233118:-1
so has part: feature:232432-233118:-1:exon
subclass of: SO_0000010

position:232432:-1
position: 232432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233118:-1
position: 233118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232432-233118:-1:exon

HB778_RS38880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38880
old locus tag: HB778_39020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011578838.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MAAPKRSNHSGTRSRAGVAGLSFTTKLPAQADFEKVLLERYQEAIARSRKIGHRVSFRVEVDPAADAQTITPVEKQSIASDDTFPVEDTGKPEGELEAALAAARERGRKRVAEIVAGEDMLSAEAFAKLLGTSRVTVNAKRQSGQVLGIDGAKRGFRFPVWQLDKDGRPFGALPALHAMLGNSAWAVYRFLASRHGALDGRTGLRALQQGDDAAVLAAAEGMARGDFD
SIO_010081: HB778_RS38880
subclass of: SO_0000673
so part of: HB778_RS38880
location: complement(232432..233118)
location: region:232432-233118:-1
so has part: feature:232432-233118:-1:exon

WP_183465786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232432-233118:-1:exon

HB778_RS42450
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42450
so part of: sequence
location: complement(233209..233322)
location: region:233209-233322:-1
so has part: feature:233209-233322:-1:exon
subclass of: SO_0000010

position:233209:-1
position: 233209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233322:-1
position: 233322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233209-233322:-1:exon

HB778_RS42450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42450
inference: COORDINATES: protein motif:HMM:NF023398.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIQERLKVTKQGALNLVDGLGAARDDGRGRFRAWGIG
SIO_010081: HB778_RS42450
subclass of: SO_0000673
so part of: HB778_RS42450
location: complement(233209..233322)
location: region:233209-233322:-1
so has part: feature:233209-233322:-1:exon

WP_244662200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233209-233322:-1:exon

HB778_RS42455
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42455
so part of: sequence
location: complement(233361..233630)
location: region:233361-233630:-1
so has part: feature:233361-233630:-1:exon
subclass of: SO_0000010

position:233361:-1
position: 233361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233630:-1
position: 233630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233361-233630:-1:exon

HB778_RS42455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42455
inference: COORDINATES: protein motif:HMM:NF019376.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1612 domain-containing protein
translation: MEVLQHAAWLRPPLVVALLRREGLAAHHLASLHLGAKNIPRKRRRARNRGDRLLALLDAIHDAAVAGLKEPFCAGKKPDGAARARNSPT
SIO_010081: HB778_RS42455
subclass of: SO_0000673
so part of: HB778_RS42455
location: complement(233361..233630)
location: region:233361-233630:-1
so has part: feature:233361-233630:-1:exon

WP_244662185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233361-233630:-1:exon

HB778_RS38890
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38890
old locus tag: HB778_39030
so part of: sequence
location: 234321..234605
location: region:234321-234605:1
so has part: feature:234321-234605:1:exon
subclass of: SO_0000010

position:234321:1
position: 234321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234605:1
position: 234605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234321-234605:1:exon

HB778_RS38890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38890
old locus tag: HB778_39030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKTDVQPSSIEGIKRLAKAISKRDAISHSEALDTASKVSGFGNFQHARRSLGDRSAEASLARNVVYISTFWEDGHEHPAVRLSGYSFQSRLMN
SIO_010081: HB778_RS38890
subclass of: SO_0000673
so part of: HB778_RS38890
location: 234321..234605
location: region:234321-234605:1
so has part: feature:234321-234605:1:exon

WP_183465787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234321-234605:1:exon

HB778_RS42460
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42460
so part of: sequence
location: 234749..235612
location: region:234749-235612:1
so has part: feature:234749-235612:1:exon
subclass of: SO_0000010

position:234749:1
position: 234749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235612:1
position: 235612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234749-235612:1:exon

HB778_RS42460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42460
inference: COORDINATES: protein motif:HMM:NF036894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5623 domain-containing protein
translation: MDITGLQPSKAHVEPGAEYLARLPGRDHGSAWYDPVAKHHVGADEPYARSVASKERDAWARRHNWSIARPEWPGMYYPGSCELYLYADASKGYSLDGLLKALSKGPSPIVPANCDRVAIDGRAPFVTPGEKAKAEAKLARNVQRKATAPRGPNTTVEYRLPLSGMRRRRPKAAMPVDAHARIGTLLKGVLTDMRARAGVYKRVDAVRSELDDWVQCEHDRAAMPDEVFFDLYYGENSAGGTSKAGEQHIEDLRLAQSILMQHYPDCAPLRDLVGKIDLAVISLEKLR
SIO_010081: HB778_RS42460
subclass of: SO_0000673
so part of: HB778_RS42460
location: 234749..235612
location: region:234749-235612:1
so has part: feature:234749-235612:1:exon

WP_244662186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234749-235612:1:exon

HB778_RS38900
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38900
old locus tag: HB778_39040
so part of: sequence
location: complement(235645..236334)
location: region:235645-236334:-1
so has part: feature:235645-236334:-1:exon
subclass of: SO_0000010

position:235645:-1
position: 235645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236334:-1
position: 236334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235645-236334:-1:exon

HB778_RS38900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38900
old locus tag: HB778_39040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010915941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MEQARGKRAKEQSDGHLFDRELDHLPPEVRWREWMNRVEATIFAASEPVSREVLTRIVGKTCSIDLLIDDIREELRGRPYDLVAVASGWKHLTRPAYADAIRTAVGSGERAVDLTQSEVLVLMCIAFFQPITRAELSSFFGKEISRDLIGNLRSFGLIASGPRSPTPGAPYTYVTTKQFLLEFGLETLRDLPDFEALEDAGLLSKEKLLAGDIMPGFSAPGENDADVDE
SIO_010081: HB778_RS38900
subclass of: SO_0000673
so part of: HB778_RS38900
location: complement(235645..236334)
location: region:235645-236334:-1
so has part: feature:235645-236334:-1:exon

WP_183465788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235645-236334:-1:exon

HB778_RS38905
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38905
old locus tag: HB778_39045
pseudo: true
so part of: sequence
location: complement(236339..237324)
location: region:236339-237324:-1
so has part: feature:236339-237324:-1:exon
subclass of: SO_0000010

position:236339:-1
position: 236339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237324:-1
position: 237324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236339-237324:-1:exon

HB778_RS38905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38905
old locus tag: HB778_39045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006204737.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1403 family protein
SIO_010081: HB778_RS38905
subclass of: SO_0000673
so part of: HB778_RS38905
location: complement(236339..237324)
location: region:236339-237324:-1
so has part: feature:236339-237324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236339-237324:-1:exon

HB778_RS42465
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42465
old locus tag: HB778_39050
pseudo: true
so part of: sequence
location: complement(238117..238385)
location: region:238117-238385:-1
so has part: feature:238117-238385:-1:exon
subclass of: SO_0000010

position:238117:-1
position: 238117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238385:-1
position: 238385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238117-238385:-1:exon

HB778_RS42465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42465
old locus tag: HB778_39050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007598511.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
SIO_010081: HB778_RS42465
subclass of: SO_0000673
so part of: HB778_RS42465
location: complement(238117..238385)
location: region:238117-238385:-1
so has part: feature:238117-238385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238117-238385:-1:exon

HB778_RS38915
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: repC
locus tag: HB778_RS38915
old locus tag: HB778_39055
so part of: sequence
location: complement(238507..239712)
location: region:238507-239712:-1
so has part: feature:238507-239712:-1:exon
subclass of: SO_0000010

position:238507:-1
position: 238507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239712:-1
position: 239712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238507-239712:-1:exon

HB778_RS38915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: repC
locus tag: HB778_RS38915
old locus tag: HB778_39055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010916134.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: METGIATTPFGRRPMSLAMLAARNDSREIPKGRVVDKWQIYRNLCEGKSIVGIGDRALAVLNALLSFYPDSELSEENGLIVFPSNAQLSLRAHGMPEPTVRRHLAALVDCGLIIRRDSPNGKRYARKGRGGEIEEAFGFSLAPLLARACEFEAAAERVRADNRALRLMRERITLHRRDIHKLIEAALEEHVPGGWGGLWKRFRSVVEAIPRRACIAELEPIAADLAVLHDDVDKLLETHMKSTNPSGNDSQSERQQSNSNTDSTFEFEPALEKSGATAEPRTRTAEAPKTYPLGMVLKACPEIADYAVDGISNWRDLMITAAQVRGYLGVSPSAYEEACHAMGQETAAMVIACILQRAQHINSAGGYLRALTDKARVGTFSVGPMLMAALKANGATARMTG
SIO_010081: HB778_RS38915
subclass of: SO_0000673
so part of: HB778_RS38915
location: complement(238507..239712)
location: region:238507-239712:-1
so has part: feature:238507-239712:-1:exon

WP_183465790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238507-239712:-1:exon

HB778_RS38920
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: repB
locus tag: HB778_RS38920
old locus tag: HB778_39060
so part of: sequence
location: complement(239869..240870)
location: region:239869-240870:-1
so has part: feature:239869-240870:-1:exon
subclass of: SO_0000010

position:239869:-1
position: 239869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240870:-1
position: 240870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239869-240870:-1:exon

HB778_RS38920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: repB
locus tag: HB778_RS38920
old locus tag: HB778_39060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018859808.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MARKDLLASVTASLTREQPVHSASQARSDYAKRGASRSMMQSLDELAENSVRMLDGETVVAIDPKDLDGSFIADRIGEDDAEYLQLRQAIRTSGQSTPILVRPHPHDIGRYMIVFGHRRAKVARDLGINVRAVVKRLADIEHVIAQGQENTARADLSFIEKSLFARKLIESGMTKDTVKSALTVDDTLLSRMLSVAETVPEAVLSVVGAAKGVGRDRWEELKKLVQIPANATKAIEYVRTEEFAAGQVKDEVFNLLLSHLKSSKTPKKPKVALAPKAWAPADRSLSVAIRGTPKKASIIVEAAYGLHFAEFIAGQLDGLYEAYRKQEKETKGD
SIO_010081: HB778_RS38920
subclass of: SO_0000673
so part of: HB778_RS38920
location: complement(239869..240870)
location: region:239869-240870:-1
so has part: feature:239869-240870:-1:exon

WP_183455392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239869-240870:-1:exon

HB778_RS38925
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: repA
locus tag: HB778_RS38925
old locus tag: HB778_39065
so part of: sequence
location: complement(240946..242151)
location: region:240946-242151:-1
so has part: feature:240946-242151:-1:exon
subclass of: SO_0000010

position:240946:-1
position: 240946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242151:-1
position: 242151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240946-242151:-1:exon

HB778_RS38925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: repA
locus tag: HB778_RS38925
old locus tag: HB778_39065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016920730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MNLMPDHDLEFDFDEEILEQGELISDKLNMLRLEQYPPNAMKGLRQFSSVEVADFLGVTQNHIKKLHLEGKGPAPEVSNSGRRSYTALQMLELRQYLDKHGRSDFKRYVPHRRQGDTLQVISVVNFKGGSGKTTTAAHLAQYLALTGHRVLAIDLDPQASLSALHGIQPELDKNPSLYEALRYDEHKKSIKEIIRPTNFPGLDIVPANLELQEYEYDTPLAASSKNSPEGRLFFTRISAALKEVDDRYDVIVIDCPPQLGYLTLTSLTASTSVIITVHPQMLDVMSMSQFLLMLGGILQSIKGAGAAVKLKWFRYLVTRYEPTDGPQAQMVGFLQALFNKRMLKNQMVKTTAISDAGITKQTLYEVEKSQFTRTTYERAIESLNAVNSEITSLIHKAWGRK
SIO_010081: HB778_RS38925
subclass of: SO_0000673
so part of: HB778_RS38925
location: complement(240946..242151)
location: region:240946-242151:-1
so has part: feature:240946-242151:-1:exon

WP_183455391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240946-242151:-1:exon

HB778_RS38930
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38930
old locus tag: HB778_39070
so part of: sequence
location: 242724..242996
location: region:242724-242996:1
so has part: feature:242724-242996:1:exon
subclass of: SO_0000010

position:242724:1
position: 242724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242996:1
position: 242996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242724-242996:1:exon

HB778_RS38930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38930
old locus tag: HB778_39070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHEVGDTFWLMAVGGVSWPACPISSLVAPLSDLIDQLRQNAGGHDFERSFGGGMAMMIQIGHRESHDIDIFLDDPQLLGFIDPSRTPPAL
SIO_010081: HB778_RS38930
subclass of: SO_0000673
so part of: HB778_RS38930
location: 242724..242996
location: region:242724-242996:1
so has part: feature:242724-242996:1:exon

WP_183455498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242724-242996:1:exon

HB778_RS42470
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42470
old locus tag: HB778_39075
pseudo: true
so part of: sequence
location: 243170..243440
location: region:243170-243440:1
so has part: feature:243170-243440:1:exon
subclass of: SO_0000010

position:243170:1
position: 243170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243440:1
position: 243440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243170-243440:1:exon

HB778_RS42470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42470
old locus tag: HB778_39075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003526806.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator
SIO_010081: HB778_RS42470
subclass of: SO_0000673
so part of: HB778_RS42470
location: 243170..243440
location: region:243170-243440:1
so has part: feature:243170-243440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243170-243440:1:exon

HB778_RS38935
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38935
old locus tag: HB778_39080
so part of: sequence
location: complement(243803..244906)
location: region:243803-244906:-1
so has part: feature:243803-244906:-1:exon
subclass of: SO_0000010

position:243803:-1
position: 243803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244906:-1
position: 244906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243803-244906:-1:exon

HB778_RS38935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38935
old locus tag: HB778_39080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009450638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MTFQADRPYNDLPPLPPKEDVETKSVLKACIAARAALAELRISGQHIPNQAVLINSIPLLEAQASSEIENIVTTTDRLFRFANEAGNLADAATKEALRYRTALNQGFRTLQERPVTTSTAVAVCRTIKGVELDIRSTPGTALVNQATGAVVYTPPEGQNLLRDKLANWERYIHEAEDIDPLIRLAVMHYQFEAIHPFIDGNGRTGRVLNLLYLVDKGLLDIPVLYLSRYIIRNKGAYYDRLLAVTTEGAWESWILYMLAAVTETAGWSTARIRAIRDLLDQTAERLRRDLPKIYSRELAEIIFVNPYCRIGDLVSSGIAKRQAASVYLKTLVDNGLLQEVKAGRENLYINPALLALLTEREPAQGGR
SIO_010081: HB778_RS38935
subclass of: SO_0000673
so part of: HB778_RS38935
location: complement(243803..244906)
location: region:243803-244906:-1
so has part: feature:243803-244906:-1:exon

WP_183455461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243803-244906:-1:exon

HB778_RS38940
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38940
old locus tag: HB778_39085
so part of: sequence
location: complement(245072..246139)
location: region:245072-246139:-1
so has part: feature:245072-246139:-1:exon
subclass of: SO_0000010

position:245072:-1
position: 245072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246139:-1
position: 246139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245072-246139:-1:exon

HB778_RS38940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38940
old locus tag: HB778_39085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011578806.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MAMGRPVDGTSDWTPSPPLSSTAPNRLPAHLDQLADRARDYVEAASSANTRRAYAADWKHFCAWARRQNLEVFPPGPQTVGLYITACASGKVTGDKKPNSVATIERRLSSLSWNYTQRGQPLDRKDRHIATVLAGIRNSHAQPPRQKEALLPEDLIAMLETLDRGTLRGLRDRAMLLLGFAGGLRRSEIVGLDVGRDQTEDSSGWIESFDKGMLVTLRGKTGWREVEIGRGSSDATCPVVALQTWLKLARIAHGPLFRRVTGHGKAVGAERLNDQEVARLVKRTALAAGVRGDLSEGERGTKFSGHSLRAGLASSAEVDERYVQKQLGHASAEMTRRYQRRRDRFRINLTKASGL
SIO_010081: HB778_RS38940
subclass of: SO_0000673
so part of: HB778_RS38940
location: complement(245072..246139)
location: region:245072-246139:-1
so has part: feature:245072-246139:-1:exon

WP_183465886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245072-246139:-1:exon

HB778_RS38945
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38945
old locus tag: HB778_39090
so part of: sequence
location: 246595..246954
location: region:246595-246954:1
so has part: feature:246595-246954:1:exon
subclass of: SO_0000010

position:246595:1
position: 246595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246954:1
position: 246954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246595-246954:1:exon

HB778_RS38945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38945
old locus tag: HB778_39090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013851101.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MPDRIFKAAWFAKAARKARLSDAALTRAAREAAQGKADDLGGGVFKKRLGDNRFRSILLARSGEFWVYVYLFAKQDRANIDDDELRAFRDLAALYRRKSTVDLDAELTAGALMEIGDDD
SIO_010081: HB778_RS38945
subclass of: SO_0000673
so part of: HB778_RS38945
location: 246595..246954
location: region:246595-246954:1
so has part: feature:246595-246954:1:exon

WP_183455388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246595-246954:1:exon

HB778_RS38950
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38950
old locus tag: HB778_39095
so part of: sequence
location: 246944..247267
location: region:246944-247267:1
so has part: feature:246944-247267:1:exon
subclass of: SO_0000010

position:246944:1
position: 246944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247267:1
position: 247267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246944-247267:1:exon

HB778_RS38950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38950
old locus tag: HB778_39095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator
translation: MTIKRKFKSDAFEAIHSAVEGMVRAGTVDKQTLRSFDEACLSRPTIFDAKKIKALRERNHVSQPVFARYLNTSESTVQKWETGAKRPSGLALKLLSVVEKHGLQVLQ
SIO_010081: HB778_RS38950
subclass of: SO_0000673
so part of: HB778_RS38950
location: 246944..247267
location: region:246944-247267:1
so has part: feature:246944-247267:1:exon

WP_183465791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246944-247267:1:exon

HB778_RS38955
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38955
old locus tag: HB778_39100
so part of: sequence
location: 247386..248408
location: region:247386-248408:1
so has part: feature:247386-248408:1:exon
subclass of: SO_0000010

position:247386:1
position: 247386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248408:1
position: 248408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247386-248408:1:exon

HB778_RS38955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38955
old locus tag: HB778_39100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010915796.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1403 family protein
translation: MILRPKPSLRHQGTLLGAMAATPMLAVPSWLRRAAPDAQTVAAQSIEDIAVTAGAAIGALDAVVRRQERWAGAWRQRLALSAAAATAKQAGRVNDENALRDAMLLTRPGDFLSVGPAGSMLLAWRRLAGTPAEKLLTEASIGAVLDDLGLRRDDEVVSDLADDLRQLSAGIGTVGMLTGAFATAERYGFARAFVCWLADALLAQRLGWAHAVPLLGAESAVSTSGRSRRSAASSVATSIETDPERAKDLLAAQARAALRAIDLSAELERRADRLLAVAPKLRAKAADAVVDKLLSDDAIVASEKIAGMSDRGLRRLFDRLVELGAVRELSGRPTFRIYGL
SIO_010081: HB778_RS38955
subclass of: SO_0000673
so part of: HB778_RS38955
location: 247386..248408
location: region:247386-248408:1
so has part: feature:247386-248408:1:exon

WP_183465887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247386-248408:1:exon

HB778_RS38960
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38960
old locus tag: HB778_39105
so part of: sequence
location: 248414..249136
location: region:248414-249136:1
so has part: feature:248414-249136:1:exon
subclass of: SO_0000010

position:248414:1
position: 248414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249136:1
position: 249136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248414-249136:1:exon

HB778_RS38960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38960
old locus tag: HB778_39105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011578661.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MVEARAKQGRGRSSEGRSADQRSGDRLFDRELDHLPPEVRWREWMNRVEATIFAASEPVGRETLARVVGKTCSIDLLIDDIREELRGRPYDLIAVAGGWKHLTRPAYADAIRAAVGGNERAVDLTQSEVLVLMCIAYFQPITRAELSSFFGKEISRDFIGHLRGAKLIASGPRSPTPGAPYTYVTTKEFLLEFGLDTLRDLPDFEALEDAGLLSKEKLLAGEIMPELAGGHEDVAVDMEE
SIO_010081: HB778_RS38960
subclass of: SO_0000673
so part of: HB778_RS38960
location: 248414..249136
location: region:248414-249136:1
so has part: feature:248414-249136:1:exon

WP_183465792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248414-249136:1:exon

HB778_RS38965
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38965
old locus tag: HB778_39110
so part of: sequence
location: complement(249666..250349)
location: region:249666-250349:-1
so has part: feature:249666-250349:-1:exon
subclass of: SO_0000010

position:249666:-1
position: 249666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250349:-1
position: 250349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249666-250349:-1:exon

HB778_RS38965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38965
old locus tag: HB778_39110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989818.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MNTMQPVEQGSLSARTYISLREALIAGNFRPGERLLMQDLAKRLGTSVTPVREACFRLVSEQALELRSGRFVTVPELTRSRYWQVRLIRIALEGLAAELAVEHVSDAAIDTLVEIHRDFVAGETSGDAERARRANRAFHFGVYRLSKMDMLIAQIESLWVSMGPILNVYYQQAENDYIGAEEHETLIEAFRARNKKMARKAIERDIVRGGMNLLRYFDEQAATAQRS
SIO_010081: HB778_RS38965
subclass of: SO_0000673
so part of: HB778_RS38965
location: complement(249666..250349)
location: region:249666-250349:-1
so has part: feature:249666-250349:-1:exon

WP_183465793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249666-250349:-1:exon

HB778_RS38970
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38970
old locus tag: HB778_39115
so part of: sequence
location: complement(250901..251878)
location: region:250901-251878:-1
so has part: feature:250901-251878:-1:exon
subclass of: SO_0000010

position:250901:-1
position: 250901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251878:-1
position: 251878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250901-251878:-1:exon

HB778_RS38970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38970
old locus tag: HB778_39115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008033233.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase C-terminal domain-containing protein
translation: MNGPIDPNSWQYRQINARAPGLSYLSNALIDLVDEGHPVVAGTADLQYSNGLVRFAERFPERFTQFGISEQNMVSAAAGMASTGVMPFVATFASFLALLCCEQIRTDVAYSALPVRLIGHHAGISLGFYGTSHHATEDLAIMRSIADLTVVAPADGPQLAAAVKASVNHAQPIYFRIGRGQEPVVYEDGVGFQFGKAIVHGEGSDLTIIACGSMVHPSREAYRALRAAGKSVGLIDMHTIKPLDTKAVLAAAAHSRFILTIEEHNILGGLAGAVAEILAEAGSPARLIRHGIRDEYSLIAPPTHLYKHYRLDAAGIEATVLEALG
SIO_010081: HB778_RS38970
subclass of: SO_0000673
so part of: HB778_RS38970
location: complement(250901..251878)
location: region:250901-251878:-1
so has part: feature:250901-251878:-1:exon

WP_183465794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250901-251878:-1:exon

HB778_RS38975
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38975
old locus tag: HB778_39120
so part of: sequence
location: complement(251875..252756)
location: region:251875-252756:-1
so has part: feature:251875-252756:-1:exon
subclass of: SO_0000010

position:251875:-1
position: 251875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252756:-1
position: 252756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251875-252756:-1:exon

HB778_RS38975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38975
old locus tag: HB778_39120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012114066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase
translation: MPNPHTPSDIALQPDAGRIALLRDRAEFVRLETLRLIQIAKVGHYSSVFSCAEIFATLYYDAMRLKRGDPRWPDRDRFLMGKGHAAVGLYPLLVDWGFFSKDVLDGYTRLGNPLGDHPDMRKVPGVDFSSGSIGHALSGGLGMALGGRATDRRFDVYVLLGDGEMQEGQVWEAALSAAHHKAGNLIAIVDRNGYQLDGQVDDIIGIEPLADKWAAFGWQVHEVDGHDVVALATLLRQLKAETSRVQPVCIIAKTSKGKGVGYMETEPGWHLGYLAPSDEALAAEEIKRGGKAQ
SIO_010081: HB778_RS38975
subclass of: SO_0000673
so part of: HB778_RS38975
location: complement(251875..252756)
location: region:251875-252756:-1
so has part: feature:251875-252756:-1:exon

WP_183465796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251875-252756:-1:exon

HB778_RS38980
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38980
old locus tag: HB778_39125
pseudo: true
so part of: sequence
location: 252883..254234
location: region:252883-254234:1
so has part: feature:252883-254234:1:exon
subclass of: SO_0000010

position:252883:1
position: 252883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254234:1
position: 254234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252883-254234:1:exon

HB778_RS38980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38980
old locus tag: HB778_39125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013637090.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aminotransferase
SIO_010081: HB778_RS38980
subclass of: SO_0000673
so part of: HB778_RS38980
location: 252883..254234
location: region:252883-254234:1
so has part: feature:252883-254234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252883-254234:1:exon

HB778_RS38985
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38985
old locus tag: HB778_39130
so part of: sequence
location: 254314..254844
location: region:254314-254844:1
so has part: feature:254314-254844:1:exon
subclass of: SO_0000010

position:254314:1
position: 254314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254844:1
position: 254844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254314-254844:1:exon

HB778_RS38985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38985
old locus tag: HB778_39130
inference: COORDINATES: protein motif:HMM:NF019998.2
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TOBE domain-containing protein
translation: MLSDRYIEFDKVENSSCRLPRCEQPRTGFVAGFIGENNKLIGVVSRQRHGECQAEIDGGVTIIARCDPAHEWREGKEVTISIRPENVCVGPQADAPDIVISACVSEVIYLGDHVRLHLILSGGGVLVAKRPNRRTWNIAAARRCASAGARPTVSSGRPTREPPGKARAGTSQILTR
SIO_010081: HB778_RS38985
subclass of: SO_0000673
so part of: HB778_RS38985
location: 254314..254844
location: region:254314-254844:1
so has part: feature:254314-254844:1:exon

WP_183465799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254314-254844:1:exon

HB778_RS38990
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38990
old locus tag: HB778_39135
so part of: sequence
location: 254865..256322
location: region:254865-256322:1
so has part: feature:254865-256322:1:exon
subclass of: SO_0000010

position:254865:1
position: 254865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256322:1
position: 256322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254865-256322:1:exon

HB778_RS38990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38990
old locus tag: HB778_39135
EC number: 1.2.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019173554.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent succinate-semialdehyde dehydrogenase
translation: MLQKTSHFMRQANLINGEWVQADSGQTVDVNNPATGLKIGTVPKSGKAETHRAIEAAATAFKTWRKTTALERSKLLRKLHDAMMDNQDVLAELLTIEQGKSLFESKGEIGSAASYILWFAEEGRRTYGDVVPSPWADRRILVTKEPVGVIAAITPWNFPSSMLARKLGPALAAGCTAVVKPASQTPYSGLAWGTLAEEVGFPKGVVNILTGSASEIGDEICANPLVSKITFTGSTEVGKLLIQKSSVTVKKVSMELGGNAPFIVFDDADIERAVAGAITAKYRNSGQTCVCTNRFLVQAGVYDKFVEKLAAASNGLKVGSGLEEGVQQGPLIDEKAVEKVEELIADATAKGGKVVAGGKRHALGGSFFQPTVIANATPKMRFMKEEIFGPVAPVFKFETEEEAIALANDTEFGLACYFYTGDLGRAFRVMEGLKYGMVGVNEGLITTPEAPFGGVKESGLGKEGGHQGIEDYLDTKYVCIGGLGL
SIO_010081: HB778_RS38990
subclass of: SO_0000673
so part of: HB778_RS38990
location: 254865..256322
location: region:254865-256322:1
so has part: feature:254865-256322:1:exon

WP_183465801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254865-256322:1:exon

HB778_RS38995
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS38995
old locus tag: HB778_39140
so part of: sequence
location: 256401..257312
location: region:256401-257312:1
so has part: feature:256401-257312:1:exon
subclass of: SO_0000010

position:256401:1
position: 256401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257312:1
position: 257312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256401-257312:1:exon

HB778_RS38995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS38995
old locus tag: HB778_39140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020070512.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class IV
translation: MTLPSASDGIAFIDGSYVPIAEARIPILDRGFVRSDATYDVAHVWNGRFFRLRDHMARFNASMRGLRMTLPLDDAQIEGILTECVSRSGLRDAYVQMTCTRGVPPKGTRDPRLCENRFYAFAQPFVWLANEEQRGRGLSMIISDIRRIPAESIDPRIKNFHWLDLTMGIFEAYDRGATVVVLSDTEGNVTEGPGFNIFIVKDGALATPDSGVFEGMTRRCVVELSREIGIPCDLRMVTAAQVRDADEVFITSTAGGIMPVTTIDARPVSQASVGGITTKLRDLYWERHRTTWLGEPIIYKDEP
SIO_010081: HB778_RS38995
subclass of: SO_0000673
so part of: HB778_RS38995
location: 256401..257312
location: region:256401-257312:1
so has part: feature:256401-257312:1:exon

WP_244662187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256401-257312:1:exon

HB778_RS39000
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39000
old locus tag: HB778_39145
so part of: sequence
location: 257309..258082
location: region:257309-258082:1
so has part: feature:257309-258082:1:exon
subclass of: SO_0000010

position:257309:1
position: 257309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258082:1
position: 258082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257309-258082:1:exon

HB778_RS39000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39000
old locus tag: HB778_39145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020070511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MSATGNVYVVTGGTHGIGAACVRRLAEQEDAAVVFTGRDQAAAGEIVSSFANARFIACDVRDETECRTVVNAAMTLGHGKIAGLVNNAGMTGRGAFEAATLCDWDEIMTVNTRSSFVFTSAALPGLRAARGSVVMMSSVAGLTGEEGLAIYSASKAALIALTRSLALEISEVRFNAVCPGQIATRMMAGTLAIPGRRTLLESRIPVGRLGTPEDVAEAVAWLLAPASSFVNGIVMPVDGGESAGLKTPTRPENSTGS
SIO_010081: HB778_RS39000
subclass of: SO_0000673
so part of: HB778_RS39000
location: 257309..258082
location: region:257309-258082:1
so has part: feature:257309-258082:1:exon

WP_183465803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257309-258082:1:exon

HB778_RS39005
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: torT
locus tag: HB778_RS39005
old locus tag: HB778_39150
so part of: sequence
location: 258280..259350
location: region:258280-259350:1
so has part: feature:258280-259350:1:exon
subclass of: SO_0000010

position:258280:1
position: 258280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259350:1
position: 259350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258280-259350:1:exon

HB778_RS39005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: torT
locus tag: HB778_RS39005
old locus tag: HB778_39150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020227747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TMAO reductase system periplasmic protein TorT
translation: MTKNRAFRSILAAAFVSGVAVLPNAAQAKDWWPFKINAAKGGDLKKVEAIDYVPLEKAEKPWNLCVLFPHLKDSYWVSVDYGIVEEAKRLGVKVTVLQAGGYDALPKQLSQYDDCVASGAQGILVAAISEAGLAAKLKEGNAKGLVQIAVANPILETPITARITPDTYQKGFQEGEYLKKYLGDKKTTAIGLPGPQGSGWAESYMAGFRDSTKTGNIKLLAELYGEPGVPQSLRLIEDALQTHPDLNVIWGGAAAAEAAVSAVADAGRDDVVIMSSYENQTMLKLVKEGKVLGFAAEYPVMMGRISVDLAVRALEKKDYEKVLLVAPGIVTKDNIDKIDPTQIFAPDGWKPEFSVQ
SIO_010081: HB778_RS39005
subclass of: SO_0000673
so part of: HB778_RS39005
location: 258280..259350
location: region:258280-259350:1
so has part: feature:258280-259350:1:exon

WP_183465806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258280-259350:1:exon

HB778_RS39010
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39010
old locus tag: HB778_39155
so part of: sequence
location: 259465..260928
location: region:259465-260928:1
so has part: feature:259465-260928:1:exon
subclass of: SO_0000010

position:259465:1
position: 259465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260928:1
position: 260928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259465-260928:1:exon

HB778_RS39010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39010
old locus tag: HB778_39155
EC number: 7.5.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003530887.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter ATP-binding protein
translation: MVALDGVDFTLLSGEVHALLGENGAGKSTLINLIAGTYNWTEGSCRIDGETVPALTPQKSRDAGVAAVFQEFSLVPDLTVEENLFLGRELKGRIFLNRRAMRARAEERFREIGFHVQLDSKIETLTRAQKQMVEIAKGMLSDAKILILDEPTASLTDGEAEKLFAAIAGLKARGVGIIYVSHRMAEIRRLADRVTVLRGGRKIDTLAIAAASDATLIEMMVGQPVERLYPSISQRPSDIVLATRGLRVSGTVSDASITVRAGEIVGLAGLVGCGRSELCRAVFGLERVTSGEIELHGAVVQAPAPHSMLRAGLCYYPADRGAEGLALSRPGRENVTMAALDDPRLSHGGLLKSWRERRAIAAPLKTLGLRPMAPERAASSFSGGNQQKLVLARGLMRPVSVHVFDEPTVGIDVGAKSEVYRLMKSLVENGAAILLSSSELPELVHLANRVYVMREGRIVAELEADGISEVTVLRHYFDAETGATEAA
SIO_010081: HB778_RS39010
subclass of: SO_0000673
so part of: HB778_RS39010
location: 259465..260928
location: region:259465-260928:1
so has part: feature:259465-260928:1:exon

WP_183465808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259465-260928:1:exon

HB778_RS39015
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39015
old locus tag: HB778_39160
so part of: sequence
location: 260925..261899
location: region:260925-261899:1
so has part: feature:260925-261899:1:exon
subclass of: SO_0000010

position:260925:1
position: 260925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261899:1
position: 261899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260925-261899:1:exon

HB778_RS39015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39015
old locus tag: HB778_39160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989827.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTTDALRRRFLETGGIVILLLVAVATAAAIIEPRFLNRLNILNVLRNFSFLAVPAIGQMIVMTTGGFDLSVGATMALASVVTAAAMAAMPEAQGIQLLLPVALALASGACVGLVNGTLVARLALSPFMVTLASLSIVAGITLYYTQGIPIYGVSDAFVDAMGRGQVLGLPPVLLLAIAVIAIAIVLQRRTPLGRHFYAVGGNAGAARLSGVRTHRVLITAYVLSGLLAALTGVLITARIGSGQSTIGGTLGLETIAAAVIGGVSLRGGSGRAENVAMAALCLAIIANAMNLTQIDSKFQTLVLGTVLIGALAFDRIVQGRRANV
SIO_010081: HB778_RS39015
subclass of: SO_0000673
so part of: HB778_RS39015
location: 260925..261899
location: region:260925-261899:1
so has part: feature:260925-261899:1:exon

WP_183465810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260925-261899:1:exon

HB778_RS39020
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39020
old locus tag: HB778_39165
so part of: sequence
location: 261892..262881
location: region:261892-262881:1
so has part: feature:261892-262881:1:exon
subclass of: SO_0000010

position:261892:1
position: 261892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262881:1
position: 262881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261892-262881:1:exon

HB778_RS39020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39020
old locus tag: HB778_39165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013166376.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSDRPDVAAPVVLDRARPDIRQLAAQARLPGAIFLALLVLGLIDPRIVSSGNLWNIAIQTSYLALFAMAQTMVLLTRGFDLSLGFTVSLVSVISAMVMTGTGDMPILWGIAAGLGVGVLIGGLNGFLIAGIGINPLVTTLGMANIVMALASTVSGGFPVPGIPETFTDALAEGRLIGVPVPILFAALCFALLFLVLRFTVFGRGLYLIGANPRAATAAGVRTRRVVAIDYVVCSLLAAIGAMLLTARTGSGEPNLGGNLTLESIAAAVVGGVRLTGGEGGVTAALLGALFITVISNAMNLMQVDGYLQQVLLGLIILASLILGRDHKKR
SIO_010081: HB778_RS39020
subclass of: SO_0000673
so part of: HB778_RS39020
location: 261892..262881
location: region:261892-262881:1
so has part: feature:261892-262881:1:exon

WP_183465812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261892-262881:1:exon

HB778_RS39025
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39025
old locus tag: HB778_39170
so part of: sequence
location: 262898..264958
location: region:262898-264958:1
so has part: feature:262898-264958:1:exon
subclass of: SO_0000010

position:262898:1
position: 262898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264958:1
position: 264958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262898-264958:1:exon

HB778_RS39025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39025
old locus tag: HB778_39170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase/oxoprolinase family protein
translation: MAYQVCIDIGGTFTDCLVSEPGGKISIFKSPTTPGEFEKGFINVLHVAAAGYGLDPATFMAEIDLIVHGSTVSTNALVERKTVKVGLILNEGHQDILVLREGPRKGAFQWRLDYPEPYVPRHLTKTARGRVDARGRELTPLSRSDVESAIADFRRYGVEAIAVGLLWSVVNPIHETTVRDIIAQAWPEVPVILSHEVNPMSREYKRIIAAAIDASINPIVRTYIEELRQALSRAGFQGELLLANCVGGMMPPAEMLRRPIYSVMSGPTLAPMAALALSDEANVIVGDMGGTTFDVSALRDHQIIVTPDSMIHDDSLGIAKVDVRSVGAGGGSIAWVDDGGLLRVGPQSAGARPGPACYGAGGTEPTVTDANVVLGIIDPDYFLGGRIKISRELAEKAVAGIAARLGISVFDAAYAIQTTSNHNMVGAIEEITIREGINPRDSFFVCGGGATAIHIAEMADILGLKRYMIPRFMAGLSAFGGLISDITREESAVFLTSTRRFEAAGVSDILARLKVSGEAFLEHAGVVPDLRRFEFSFLGRYEYQSWEIEVHFEADEARLDAEKLPGLVEAFHQMHERIYSIRSDRDVVEFTSWKLRAVGKRVNQDAWKDFRLADQATAPVAKAYRPVYLHEARRTSQLPVYDMDQLGAGAALDGPCLVEATTFTAFLKDKHRGSVDPQGNIVVTVD
SIO_010081: HB778_RS39025
subclass of: SO_0000673
so part of: HB778_RS39025
location: 262898..264958
location: region:262898-264958:1
so has part: feature:262898-264958:1:exon

WP_183465814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262898-264958:1:exon

HB778_RS39030
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39030
old locus tag: HB778_39175
so part of: sequence
location: 264990..266783
location: region:264990-266783:1
so has part: feature:264990-266783:1:exon
subclass of: SO_0000010

position:264990:1
position: 264990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266783:1
position: 266783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264990-266783:1:exon

HB778_RS39030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39030
old locus tag: HB778_39175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase B/oxoprolinase family protein
translation: MSSPVVRLETPTRRVDPFLMSVLKSRFEAIVREMTLVVMRASRSAVIKNARDLSCAILTYDHRLVSTEDALPIHVMSMDLATRPITELFDDIADGDIFLNNCPYTGGTHHADLIMAMPIFFEGKPLFWAVALSHHADTGAPTPSTYLPFAKNIYEEGIHFPCVRVVEQHREKQDILRIGMMRNRVPDIWLGDVRAQIGACRTGRRRLLELLEKYGRDTLLDFVEDWFDYGARRAMAEIAKLPKGKFSYEVRHDPVPGVAEEGIPVRITIDVDPDAGEITVDVRDNMDNVPGGLNLSENTCTGSCRIGVFNNLDDGIPHNEGAKSRIKVLMREGSVVGKPRYPVGTSVATTNVNDRLIIAGNCVFSTMGEPYGQAESGSHLPAGIGVISGKDPFKDGQPYVNQVFIGYAGGGARHGYDGWLTYCGPANGGLIALDSVEVDESMYPIIIESRGVVADTQGIGEFEGAPAVGGVFYPVDHEMTLVYSADGTTFPPRGVLGGGDAKASRSAKRGTDGRLVELPAFHEEACSAGERIEFVACGGGGYGEPTRRDARRVAASVSRGWLSSEAARKSYKVALVVDAEKGVWVVDQDATARLRAA
SIO_010081: HB778_RS39030
subclass of: SO_0000673
so part of: HB778_RS39030
location: 264990..266783
location: region:264990-266783:1
so has part: feature:264990-266783:1:exon

WP_183465816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264990-266783:1:exon

HB778_RS39035
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39035
old locus tag: HB778_39180
so part of: sequence
location: complement(266871..269327)
location: region:266871-269327:-1
so has part: feature:266871-269327:-1:exon
subclass of: SO_0000010

position:266871:-1
position: 266871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269327:-1
position: 269327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266871-269327:-1:exon

HB778_RS39035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39035
old locus tag: HB778_39180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019404591.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MIRIDKIRIQEFRGIRDLTLNLKGQNFAACGPNGTGKSGIVDAIEFALTGNISRLSGAGTGGLSVKAHGPHVDSRNKPEAALVTLDVTIPALGNKKAQISRTVKAASAPEINPADRDVIAAFESVNLHPEFVLSRRELIRYVLSEPGQRSKQVQTLLRLDDIEKLRSVLQKISNAATRDLPGLERVEKDAIRNLLAVLDTAQLTKRSILETVNPRRELLGLAPLSDLDASTSVKDGLTTSAANAPGRVPKIQAGADLVTLREAIQALQSDAFKQVCSTADANAAELGRDADSLNGLSREALLKSALELYDGTTCPVCDTPFEPDAFGGHLAGKLSHLEEVSRRRAALEMELKPVLDSIHTAGTALNTMINHAGLFSPKIDAHALTELTTIIRGRYQQLQKLLPLEDTRTVLAAAHIVSDIEPTMAALDTAIAAIPEPTKQDAARDFLVLAQERLEHYRTARLKFVAGTLRAERAAKVSDIYGTVTTAALEKIYKDVETAFASYYRKINEEDEKAFTAKLMPSIGKLAFDVDFYGRGHFPPGAYHSEGHQDGMGLCLYLALMNHLLGVNFTFAVLDDVLMSVDAGHRRQVCTLLKEKFPNTQFIFTTHDEIWLRHMKSEGLIKGRNFAHFRTWTVEFGPTEWDDRDVWAELDGHLAKNEVRAAAALLRHHLEHFAKEACDRLRANVEFRGDAQFMLGDLLPNATSSLGELLKKAKAAASSWNQKDVVERITAIEATFTEAKIKTGYENWQINTAVHFNEWADLNKEDFVPVVSSFRAFTGAFTCQTCNEMFFVAPDRGRKEGLRCGCGALNLNLLQKGT
SIO_010081: HB778_RS39035
subclass of: SO_0000673
so part of: HB778_RS39035
location: complement(266871..269327)
location: region:266871-269327:-1
so has part: feature:266871-269327:-1:exon

WP_183465818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266871-269327:-1:exon

HB778_RS39040
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39040
old locus tag: HB778_39185
so part of: sequence
location: complement(269324..269533)
location: region:269324-269533:-1
so has part: feature:269324-269533:-1:exon
subclass of: SO_0000010

position:269324:-1
position: 269324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269533:-1
position: 269533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269324-269533:-1:exon

HB778_RS39040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39040
old locus tag: HB778_39185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012757142.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTTESNDDKGKPPTKVKSVAASILGEFFDALEKEEGFGEAALCLRKVVLEDGVFAEPTIRVALFPDAS
SIO_010081: HB778_RS39040
subclass of: SO_0000673
so part of: HB778_RS39040
location: complement(269324..269533)
location: region:269324-269533:-1
so has part: feature:269324-269533:-1:exon

WP_183465819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269324-269533:-1:exon

HB778_RS39045
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39045
old locus tag: HB778_39190
so part of: sequence
location: complement(269820..269972)
location: region:269820-269972:-1
so has part: feature:269820-269972:-1:exon
subclass of: SO_0000010

position:269820:-1
position: 269820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269972:-1
position: 269972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269820-269972:-1:exon

HB778_RS39045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39045
old locus tag: HB778_39190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALGAQIVIVILAYELSSSVVPAEQNTITIREITKTDGRRAEIRISHTAR
SIO_010081: HB778_RS39045
subclass of: SO_0000673
so part of: HB778_RS39045
location: complement(269820..269972)
location: region:269820-269972:-1
so has part: feature:269820-269972:-1:exon

WP_183465821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269820-269972:-1:exon

HB778_RS39050
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39050
old locus tag: HB778_39195
so part of: sequence
location: 270242..271588
location: region:270242-271588:1
so has part: feature:270242-271588:1:exon
subclass of: SO_0000010

position:270242:1
position: 270242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271588:1
position: 271588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270242-271588:1:exon

HB778_RS39050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39050
old locus tag: HB778_39195
inference: COORDINATES: protein motif:HMM:NF024606.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerB N-terminal domain-containing protein
translation: MATALSVADPATAQESEHSARQTQQALADHGYDLGTADGIWGRRSISALKAFQKASNLPQTGTLDEATSAALFPQPRVTRGPLRPIATDAHPSLLEKLGVPTKTTPQISHGEAGQAGGDVHQALPLPAHTQGASAKSDRLASETNKVSEGPTTPTPRLIYLGLLGVAAALFFLRRRRRTPAAELGPATAESKRSEPERSVNRPARTDRHRLYVPNDRLVPANSAGKEPVDQNPVLPADIAASIAAHNAAVDGFIRQRGAVQRSKSGANPSARQPFAPAKTGWQSIETTKVIPATTTTEGSHASHNAQVADFIRQRGPILVPNTAGSDQPRWFDRLPAGRASPTARQSAHWIPANTVAMVGNHTIPGGMIYVGEHLPRQGSLTDPENCLIDPRLTVATHGDPLGQTMGYWPSYSSISPAARKSYLDWLASYAAIWVTRLIKRRSAASVQ
SIO_010081: HB778_RS39050
subclass of: SO_0000673
so part of: HB778_RS39050
location: 270242..271588
location: region:270242-271588:1
so has part: feature:270242-271588:1:exon

WP_183465823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270242-271588:1:exon

HB778_RS39055
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39055
old locus tag: HB778_39200
so part of: sequence
location: complement(271557..272825)
location: region:271557-272825:-1
so has part: feature:271557-272825:-1:exon
subclass of: SO_0000010

position:271557:-1
position: 271557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272825:-1
position: 272825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271557-272825:-1:exon

HB778_RS39055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39055
old locus tag: HB778_39200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_042650430.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MNETINIVRLRQPDEIDDPLTDVLRTGARKLLAQAIEMEAEAFLAEMRDLKLPDGRDRLVRHGHGPERSIQTGIGAVPVSRVKVRDRGANGEAERIRFSSSILPKWARRTRSLDALLPVLYLRGISTGDFQEALAALLGKEAPNLSPSVITRLTAEWGIEYDRWQKRDLSARRYVYVWADGVYLQARMEDHAECMLVLIGATPEGKKELLGFQTGIRESAQSWRELLVDVKRRGLQIAPDLAVGDGALGFWKALDELLPGTKHQRCWVHKTANVLNKVPKSVQAAMKTDLREIFSAPNRASAETAIAVFVEKYDAKYGKAVDCLTKDQNALLAFYDFPAEHWDHLRTSNPIESVFATVRHRTVRTKGSLSSKTARLMVFKLVMAAARTWRRLKGQNQLPKLIAGATFQDGIEVIELKPQSAA
SIO_010081: HB778_RS39055
subclass of: SO_0000673
so part of: HB778_RS39055
location: complement(271557..272825)
location: region:271557-272825:-1
so has part: feature:271557-272825:-1:exon

WP_183457400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271557-272825:-1:exon

HB778_RS39060
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39060
old locus tag: HB778_39205
so part of: sequence
location: 272970..274814
location: region:272970-274814:1
so has part: feature:272970-274814:1:exon
subclass of: SO_0000010

position:272970:1
position: 272970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274814:1
position: 274814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272970-274814:1:exon

HB778_RS39060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39060
old locus tag: HB778_39205
inference: COORDINATES: protein motif:HMM:NF024606.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerB N-terminal domain-containing protein
translation: MFLYFYGLERRLMLQENVPDADAVVAEVRRLLQVYGGNGSFKRYAGELLSAYQLKSAQLPEKLDLEVEENSYEIPIMLKVALGIRVRSGDAIEPDLLLAYVLADPETRVRTPARRAQTLLRQLFAEAVEKQYPNGMRVPAAGVRKLKVNYRACSGTFDLEIRPFGGDLPDITNRGEPIGGARRIFDDCTDRLDDYSRMLGRSEGLKPTLAAVAQLPLGLRVKNCEELPGQPLSQLQELSNDGALISIRQLAVLAGMEPDKIAARAKQKDLSGILAAFGYGNTADPSFSLKSAKPDELAMVFGLEREAEANLEPGDHYRPMLLSIMLGMVIAFADGLLHPLEERRLFGKIDEAPGLSRDERVRLKAELKVCAADASRVADWTKRIGDVPEDRREDLADELVAIAVADGTLHAREVSQLEKLFRLMDLDQNSLYLRLQGSVAPQNRPRDGNDDLPLVIPAGIQPPSIPVSPAPPRTPATRVDVSRLEAIRRETRSTSSVLADIFLDEAEPPIELQPAIEEIENGDAPFDGLERRYAWLLLQLIEQEAWTASDFERLVRGADLMPGAAKQALNDWSLDRFDELVLDGEDPVIVNASLFSETTPQSPSLTVSVEGMSA
SIO_010081: HB778_RS39060
subclass of: SO_0000673
so part of: HB778_RS39060
location: 272970..274814
location: region:272970-274814:1
so has part: feature:272970-274814:1:exon

WP_244662188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272970-274814:1:exon

HB778_RS39065
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39065
old locus tag: HB778_39210
so part of: sequence
location: 274811..276133
location: region:274811-276133:1
so has part: feature:274811-276133:1:exon
subclass of: SO_0000010

position:274811:1
position: 274811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276133:1
position: 276133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274811-276133:1:exon

HB778_RS39065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39065
old locus tag: HB778_39210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007987560.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MTTKPPPIKPRDRDTIISALRAGVVPRIGLQHIQVGRQREIEALIQDIERIGNGGSSIRLVIGAYGAGKTFFLFLIRQIALQRKLAVCQADLSPDRRIHATGGQARTLYAELATSLATRTAPDGGALRNILESYIQKASERASSSGTTIETAIKEGLGDLREMVGGYDFATVIVAYARGYEEGNSNLQDAALRWLRGEYTTKTEARGDLGVRTIIDDASFYDGLRLLARFTRLAGFGGLLVCLDELVNLYKLQSAQARKQNYEQILRIFNDVLQGTTQGIGFILGGTPEFLLDTRRGLYSYEALQSRLAGNSFAGNGLADYSGPVVNLPNLTPEELYHLLERLRDVFAAGDQEKWLVPDEALHAFMDHCANRIGEAYFRTPRNTVKAFVDLLAILQQNPGTDWKDMLGIMDVAEDRGGAGDQPIDDAEGGADDELATLRI
SIO_010081: HB778_RS39065
subclass of: SO_0000673
so part of: HB778_RS39065
location: 274811..276133
location: region:274811-276133:1
so has part: feature:274811-276133:1:exon

WP_183465827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274811-276133:1:exon

HB778_RS39070
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39070
old locus tag: HB778_39215
so part of: sequence
location: 276069..277751
location: region:276069-277751:1
so has part: feature:276069-277751:1:exon
subclass of: SO_0000010

position:276069:1
position: 276069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277751:1
position: 277751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276069-277751:1:exon

HB778_RS39070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39070
old locus tag: HB778_39215
inference: COORDINATES: protein motif:HMM:NF012492.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MTSQSMTPKAERTTSLQPSAFDTLSEPVRRWIWQRKWPSLRDVQEKAIPAILAGGDVVISARTAAGKTEAAFLPLLTRHAEHAGSADGFAILYVSPLKALINDQHRRLESLFEGSGVLLHKWHGDVSADAKTRARKRPSGVVLITPESLEALLVRRGGEVAQMFSRLDAVVIDELHAFIGTERGMQLQSILNRIEVATARDRIDRIGLSATLGDMSLAAEALRPGKGASVTIVEGKDEGNGVRLQIRGYLLDGTDPGDLMAAADNSDPPGKPAEPFEQSTVPAALASDLFRLLRGQSNLLFAGSRANVEVYADMLRSMCDEASFPNEFFPHHGNLARAMREEVEARLRDDPRPTTAVATTTLELGIDIGEVETIAQIGPGFSVASLRQRLGRSGRRAGKPATLRMFVIEPPIGKGRHPIDRLRLDLVQSIAMVECLRAGWCEPPMPAGLHLSTLLHQVMALIVQTGGVSPTIAWKLLCERGPFRAVDRTLFAELLRCMATPENQLLEQSPEGLLMIGETGEKITESYEFYAVFATEREYRIIHDARTLGTYPLSRLNARR
SIO_010081: HB778_RS39070
subclass of: SO_0000673
so part of: HB778_RS39070
location: 276069..277751
location: region:276069-277751:1
so has part: feature:276069-277751:1:exon

WP_244662189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276069-277751:1:exon

HB778_RS39075
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39075
old locus tag: HB778_39220
pseudo: true
so part of: sequence
location: complement(277902..279243)
location: region:277902-279243:-1
so has part: feature:277902-279243:-1:exon
subclass of: SO_0000010

position:277902:-1
position: 277902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279243:-1
position: 279243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277902-279243:-1:exon

HB778_RS39075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39075
old locus tag: HB778_39220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012977037.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1380 family transposase
SIO_010081: HB778_RS39075
subclass of: SO_0000673
so part of: HB778_RS39075
location: complement(277902..279243)
location: region:277902-279243:-1
so has part: feature:277902-279243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277902-279243:-1:exon

HB778_RS39080
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39080
old locus tag: HB778_39225
so part of: sequence
location: 279439..279996
location: region:279439-279996:1
so has part: feature:279439-279996:1:exon
subclass of: SO_0000010

position:279439:1
position: 279439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279996:1
position: 279996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279439-279996:1:exon

HB778_RS39080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39080
old locus tag: HB778_39225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKPTRAGKPPHFNGKGAAIHDHVVATMRAVLASDEAYPYLDPAANRLLDEARSSFLDLQLDSSSIIAHGEGVLIFPWVGTRKLQTLTLALLAREFKASHFGHAIELQECEAEKAMEALRDIAGSPAPSGEELAARLAQPALAKFDTFLSDHLMRLVTMVERISAKDLPLIAANALGNQTTHEVA
SIO_010081: HB778_RS39080
subclass of: SO_0000673
so part of: HB778_RS39080
location: 279439..279996
location: region:279439-279996:1
so has part: feature:279439-279996:1:exon

WP_183465829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279439-279996:1:exon

HB778_RS39085
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39085
old locus tag: HB778_39230
pseudo: true
so part of: sequence
location: 280105..281051
location: region:280105-281051:1
so has part: feature:280105-281051:1:exon
subclass of: SO_0000010

position:280105:1
position: 280105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281051:1
position: 281051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280105-281051:1:exon

HB778_RS39085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39085
old locus tag: HB778_39230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019565583.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nucleotidyltransferase and HEPN domain-containing protein
SIO_010081: HB778_RS39085
subclass of: SO_0000673
so part of: HB778_RS39085
location: 280105..281051
location: region:280105-281051:1
so has part: feature:280105-281051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280105-281051:1:exon

HB778_RS39090
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39090
old locus tag: HB778_39235
so part of: sequence
location: complement(281121..285056)
location: region:281121-285056:-1
so has part: feature:281121-285056:-1:exon
subclass of: SO_0000010

position:281121:-1
position: 281121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285056:-1
position: 285056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281121-285056:-1:exon

HB778_RS39090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39090
old locus tag: HB778_39235
inference: COORDINATES: protein motif:HMM:NF024867.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSQAQEWSDENMDGLNARALHLHTIDSLVADLIAGIPVLIEGARTFSLPDAATRSALAWYQNRGPAAWSADVRSPHAEELVDTISQPPPAVKALPSRPANANNRRLRLKRVEAHRFAGLHKFGTPDAAPENYVHEFSSPITLFEGRNGSGKTSLLNTVIWTLTGQMLRPQREPENPEDFDCWIGNADERTTHKLSSLTPMPLLDEYRPDKDGVPADTWVELTFVDDGGVELPPIRRSITRSLQGKLKELPPDLSALGVDPIALRIGTVMPALLPLIRLGSESELGRAVSELTGLSALVDLAAHTRRAKTKIDKDLVKAKRSERDKADGDYNVAKGDLEKILRMHAALEPPIPVPVPSDDKAIEEEVKTIKAHFDDAKASAFESAKEILGGRFDPADAKLRSDLEENIGRALERVSQLQTLKSIARLADLRKLTPDELGDAENKLTAILTEARTLQELAQNPSSAARTRLYARIKAWMTDHPDPARDQDRCVVCGGDHSNAVDPVTGQPVKQHLAGAASDANLLSQTLAHWTANAHGDLLRSLPEALRAELVTDLPSNPCDLLRKALVDEAFSFAPFAGILGELKSPTALSLDGVFENRAELDDPIAIALPAGCTHLQLALERLDRAIRFARWRQNNDALAREVLTRVLGRKPKEGEPAEKLTLTGKLLELQNIVKAAEPISDALTQCARLSKHFATRRAAETRLANYATASTALGQLADLGTLADQQVDQLRKILRTDAAAWRDLIYLGAFPDTAHRLVDTGMGRKGELDLVVQAGGVAAPAQHVTNASALRASLVAFFFAFWQHVLKERGGLTILVLDDPQELLDDENRERLAAALGNLASGGAQVIVTSYDPRFSGRVAKIQLPGGVEHLAVHPATRLQPRVRTIVPHSVLLERKKHFDADQNEEESAREFADGCRVFLEAQLGDMFDDPAHSSWAKATPNPTLADFVQRMRPLVRAGSAGMFGSGIFRRFAEHPALGDNSAVVALMNKAHHGRRLDITAGEVAQCAGQLVDLIKLAEDMREECYRWRRRDAPEAKQKFEAPAAIDFTSLAIPRVVICPDLAAFTRHRAAIGTQDEPEILDTRALEGCVAYYLRRANFGFAAPAGSLAIVRSIATPSADRRLVIARHSKDIYARRLVRSANGGLIGLTAEIPDPRIRNPKTVFLPEDETAIHQVVGVIFDHRVRVDHGPEEAVAVDANRELQRIVIAFRVVDESAVPLALDKQVVLGGDHIELDTLGHHQDALVALFLDEGSSIFKRVGSALPGDLSHLRLFESIGGMGSSQVLSVGKAANGVPSVVGARKIVGVLYNV
SIO_010081: HB778_RS39090
subclass of: SO_0000673
so part of: HB778_RS39090
location: complement(281121..285056)
location: region:281121-285056:-1
so has part: feature:281121-285056:-1:exon

WP_183465831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281121-285056:-1:exon

HB778_RS39095
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39095
old locus tag: HB778_39240
so part of: sequence
location: complement(285336..286766)
location: region:285336-286766:-1
so has part: feature:285336-286766:-1:exon
subclass of: SO_0000010

position:285336:-1
position: 285336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286766:-1
position: 286766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285336-286766:-1:exon

HB778_RS39095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39095
old locus tag: HB778_39240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011930918.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SEC-C domain-containing protein
translation: MAINEANNEGRSMTKRLYPAWKPKWSEPCPCASEKKFKDCCRRRLPGFDIGKAYFKALKDRQQERALLAARADVTQYTIWHRSHTAPVIARAGMALKLLRIDVNALGDYVGRLSALYYRLGKWNDWPAALNHLRENIQHTWWHRKITYYRAVHHLSPEGDRTEARRELAKLEPITKDESDLDILHLFVDLQFDSQSFADRIAILDRILQLGQERRNQLQYRQGKAIQYYLIGDTKTAEEQLFEVVEMVRSTEDSDPLEGHERHLFGSLLQLLGSLKRDSKLLKQSATQFQALLAEDNWTDRGKAAILGEMGDSYRYAGEWELAERTYRDGIALRGPGLHTVHLAECLLHLSGAERAASEIDTVDRTTLERREFDDFVFGYATIAISSGKKERLEAAKDLLQNLSRSEPIFNERRLKLMVSVADALAGKATANSDAPNGVVAASSFLLLQPNFLGFGINFNAIIDYLARKKPKDPPS
SIO_010081: HB778_RS39095
subclass of: SO_0000673
so part of: HB778_RS39095
location: complement(285336..286766)
location: region:285336-286766:-1
so has part: feature:285336-286766:-1:exon

WP_244662190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285336-286766:-1:exon

HB778_RS39100
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39100
old locus tag: HB778_39245
so part of: sequence
location: 287293..290322
location: region:287293-290322:1
so has part: feature:287293-290322:1:exon
subclass of: SO_0000010

position:287293:1
position: 287293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290322:1
position: 290322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287293-290322:1:exon

HB778_RS39100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39100
old locus tag: HB778_39245
inference: COORDINATES: protein motif:HMM:NF019348.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSESAFRFLLQKDAQPFCPSTCFIVADPEINDRKVWTLELERPKDAEWVLQIDDMKDWMLHGKKAVRQMFYDTQNPRTPFRELDRDEVFREYLRKILEKLPPEYQQRRKYALMPSIAEDKTRIRYKEAVEAAIPGVTIIPEPEMVAEYFRLLKRTLKLETGANNVILVIDVGASTANMTLVLSRRDGTIVDIDLKGDQRDLRIRALRGDSVANAGRWVDSHLAEVLGVSESLMDKDRENRDRVLRAIEHAKVKASETGRDVLVEIPSAGAPISISQATLKSASKTLAESLRPLFENLCERLYDNQTSSDDAKRKSAPRLSERQVTSAGEAYRLIDGVLLAGGTSLLPGFEEAMLASFFPGEHRPSVLRVGSSFAVAAAAGGLAHILHNYDPPRLREPDGQGGNVLRPALESTLSYPLILGIKQPAELEQQVSVLDPNDPFFDDGGIRPIENLPSLATGARPKMRLVPGGAAGVAARRGRKFKAMEVRQSPGKMQIEWDAVKQRATVHSDQVNHTRSTLWIDANILRKRQEEALNPFDGPVPPGALAVDAAEDVILDLGMSKIVALTADRGWVSAEELERLVQDGLDEAQLSPHSGRPDETVEETVVRDGAGPRMSDLPADQSSHAESLDQTSIPAATVGVEHVTYESNGKGAGSLGDGGRSIEPVAVEILVPTDFARDESFTWGTRISDAQFSNALESLRDVLKGAAPHLNFDDIVVTLLALAVRPVVLLAGPPGCGKTTLVRTMARILGVETGKTFHEIAVQAHWDSDSVLFDKNGLLFNLLGDQALSHIVLFDEFNLTRPEYYLSRLFHALDGGKGVIAPDMKIAPCRVLGTMNIDDSSRPPSPKVIDRCFLVELAQVPWDVERPVCLPDFSTIHPLPGLPHVPADDASSDERIDSVLKALHVAVAENDLRHDLLPSRRALADIKALLGLYHRLDLQGRDLLNRDDLVDRVLASRILIKLSGAFDQIQPALDALDKAVDGMEELQRTRRRLKLARQQSRLGFVSPWH
SIO_010081: HB778_RS39100
subclass of: SO_0000673
so part of: HB778_RS39100
location: 287293..290322
location: region:287293-290322:1
so has part: feature:287293-290322:1:exon

WP_183465833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287293-290322:1:exon

HB778_RS39105
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39105
old locus tag: HB778_39250
so part of: sequence
location: 290352..291620
location: region:290352-291620:1
so has part: feature:290352-291620:1:exon
subclass of: SO_0000010

position:290352:1
position: 290352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291620:1
position: 291620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290352-291620:1:exon

HB778_RS39105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39105
old locus tag: HB778_39250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGDDGVAVQYPWDPHAWYIIRDDCPYLDLLVRGFPAQAKEGPKLEALAEVAPEGRSWQRWDLGAELARNRRFGEVILHLKVPKNYTLRCYVIPTLLFGYRDVVAMIEDIESELDVSATWDVITERPDRSWSRRRNSGGYTTPTELVQLVNDELRSARSIRRDPFEELGPRSKRDVPLPENAIVSHWAMLRHRHLQQSADLVAKELRLLRERAARKNPDARQKKINDEIGRLEKLGLSMTELRGVISLLGNDIELLTSIDLAPVFQRDHRLRQLLRAFAPRVSEALSEVESSRSSYPPVYMNTLWELWGAVWLAKEFRSLGFTGTCFADPVDMLKSCSWQFQRGEVVLELDYEAEAALIDYERIPPVHDRGMPALEWAALNQKFDEDRPYFGSGLRCSPDYLIRITSPAGAIPDGRGRLPGEP
SIO_010081: HB778_RS39105
subclass of: SO_0000673
so part of: HB778_RS39105
location: 290352..291620
location: region:290352-291620:1
so has part: feature:290352-291620:1:exon

WP_183465835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290352-291620:1:exon

HB778_RS39110
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39110
old locus tag: HB778_39255
so part of: sequence
location: 292165..293001
location: region:292165-293001:1
so has part: feature:292165-293001:1:exon
subclass of: SO_0000010

position:292165:1
position: 292165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293001:1
position: 293001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292165-293001:1:exon

HB778_RS39110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39110
old locus tag: HB778_39255
inference: COORDINATES: protein motif:HMM:TIGR02937.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MSCHGKKQKENVTYRIFGLQSIEELSVKNSGVPDAPDYLVPLTRKTNDGTTYYRRPELEAEIRRALLRPMQELVSGSTPASDECLLYFLRNFQPNGGRSPTYESILLEFLKRVDQRAIKRTGGIHSERRTEIRGDLRVWFIDKIANQNDLLDVFEFAFNRAIKGKIIDAIRRYQARDAAEIPASVFSSDDDDGDDDGSEAIAARSNLHRRTHAETMLELRDALDQLSDKERRALLATEYLKVDQKEAGRMLGVSARRIRQLLESAYDKLETMKKGAEE
SIO_010081: HB778_RS39110
subclass of: SO_0000673
so part of: HB778_RS39110
location: 292165..293001
location: region:292165-293001:1
so has part: feature:292165-293001:1:exon

WP_183465837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292165-293001:1:exon

HB778_RS39115
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39115
old locus tag: HB778_39260
so part of: sequence
location: 292998..293552
location: region:292998-293552:1
so has part: feature:292998-293552:1:exon
subclass of: SO_0000010

position:292998:1
position: 292998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293552:1
position: 293552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292998-293552:1:exon

HB778_RS39115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39115
old locus tag: HB778_39260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQPAPDLSELLTELAATTDLSAEAVAHAIEAYPAHREEILRFAIEWHAGAESDDSNVPPLPGPDLSAFGLEPIIDPFAGRTGAELNAAAAACDIPVSILIKLEQRSIEVGTVPLLLLRSLSAFLGTQLNNLLGFLSLDPTLSTSASYRSDKPPEVAPRVSFASAIRSTKMDEGQRARWLALIE
SIO_010081: HB778_RS39115
subclass of: SO_0000673
so part of: HB778_RS39115
location: 292998..293552
location: region:292998-293552:1
so has part: feature:292998-293552:1:exon

WP_183465839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292998-293552:1:exon

HB778_RS39120
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39120
old locus tag: HB778_39265
so part of: sequence
location: 293559..296912
location: region:293559-296912:1
so has part: feature:293559-296912:1:exon
subclass of: SO_0000010

position:293559:1
position: 293559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296912:1
position: 296912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293559-296912:1:exon

HB778_RS39120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39120
old locus tag: HB778_39265
inference: COORDINATES: protein motif:HMM:NF012789.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent helicase
translation: MENFSLIRLAANELREAIDHGLAELRAGAIVERALAKRSLKLEELHVGDATLAGCLGVFNRKYGHVFVQEDLEPPTKLEVIAHEIGHEVVHNGDVAMVRKDYGSPGPGDPVLRVEAYGVKERREAQANVFARELLLPRALARRLFLGGMRARAIAEQTGLNLALVFQQLTDALLLPEPRPPAPARPDKFRKLDDSQKYAADFRGKALLLEAGPGTGKTRTLVERIVQLIQSAEAAPSEILALTFSNKAAGELIDRVGKAVGSPAANIWTSTFHAFGLELLRKHHILFGLSQDPPLVDGSRAIDMLEEALPTLPIFYHQNLFEPALALREILKAIYRAKDELVGWQAYTNLAGAMAERADPSDEQAVIAAAKAKEVALVYRHYQERLQELKQVDYGDLIMLPALRLRDDADFRAKLQAQYRWIHVDEYQDINRASAVLIKGLAGDGRQLWVVGDARQSIYRFRGASVRNVARFGEDYPDHEKAPLRVNYRSTKRIIDTFTGFSRTMKVSDFSLPLNLDPDQDVLGEAPSLSVASDADDEYSRLTASLRELEKGGMPLRTQAVLARSNGTLARVGEELEARNIPILYLGPLFDRPEVRDLLSLLSLLASSGSTLMRVAGFQQYKVSTSDIVKVLSVAKALEIRTIAMLARLEEVVGLSVEGRAGLALIATHLLGLTEGSTPWFVLMEYLFERSNYVVGLLQGNTPSADMRRVAVRQLVEALRSMPKGGTGRRSPIARGLARIRHMVLLADERELRRLPDELSDVDGVHLLTVHASKGLEFEAVHLPGLKKGAFPAPNRADRCPSPDGLVANPIEPDAHEAEEECLFFVAMSRARAILRFYRPATSNGKNANPSTYLEKLHIGSLTTAQITRSVPKPIFTPLNEPPAPTLTARDIEDYERCPRRFYYERVVGMRGDAVESTYRAAHRCLLQVIEAARESSTPLSEDAITEIFENAWAESGLVDHLYEQPYRDLTQTMLSSLRPLLARGFKKSTPIVVRLGATDIEVHPDQVEVGGVGTTLRSIRSGRPSSTEPDRLANSLLLKAAEQRHGAGATVESYHIATGETTSVVQTPAKLRNRIENSIEIAAAIGRGEFPPKSDDWQCPRCRYFFMCPAPAEPIA
SIO_010081: HB778_RS39120
subclass of: SO_0000673
so part of: HB778_RS39120
location: 293559..296912
location: region:293559-296912:1
so has part: feature:293559-296912:1:exon

WP_183465841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293559-296912:1:exon

HB778_RS39125
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39125
old locus tag: HB778_39270
so part of: sequence
location: 297011..297700
location: region:297011-297700:1
so has part: feature:297011-297700:1:exon
subclass of: SO_0000010

position:297011:1
position: 297011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297700:1
position: 297700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297011-297700:1:exon

HB778_RS39125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39125
old locus tag: HB778_39270
inference: COORDINATES: protein motif:HMM:NF025808.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multiubiquitin domain-containing protein
translation: MSLQDVSQDADQRDRFAYLVNSVPNRSRDHQIEGREILEKSGYLPADQHILIQVLDWGTQSIGLNEKVDLREEGIEQFRAFAGDRIYAFTVDLRGYEWGASTIAEAELRGYVGLSEDRIFTLDRADTPDKLIEDGSDIDLDDRGAERLKVVARPMVTVKVNNKPVNLRFGWHTGAEIKAAAIAQGVEIRLDFTLDEEKPNGDTQVIGDDDPTFISGGEVFGAVDHHEDS
SIO_010081: HB778_RS39125
subclass of: SO_0000673
so part of: HB778_RS39125
location: 297011..297700
location: region:297011-297700:1
so has part: feature:297011-297700:1:exon

WP_183465843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297011-297700:1:exon

HB778_RS39130
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39130
old locus tag: HB778_39275
so part of: sequence
location: 297700..298116
location: region:297700-298116:1
so has part: feature:297700-298116:1:exon
subclass of: SO_0000010

position:298116:1
position: 298116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297700-298116:1:exon

HB778_RS39130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39130
old locus tag: HB778_39275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGLKAGVAKAIEGFRNHFPDNRIEVCATADGAAFVIVEDVPLGPPYQQANTWVGFFLSTACPDDDTYPFYVRGDLARLDKAMLKNPLHPGKVFPDAEATMSRRASVMVSRRQRNQSCWSYEPPLLKLLTVIKWMLQQ
SIO_010081: HB778_RS39130
subclass of: SO_0000673
so part of: HB778_RS39130
location: 297700..298116
location: region:297700-298116:1
so has part: feature:297700-298116:1:exon

WP_183465845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297700-298116:1:exon

HB778_RS39135
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39135
old locus tag: HB778_39280
so part of: sequence
location: 298149..299552
location: region:298149-299552:1
so has part: feature:298149-299552:1:exon
subclass of: SO_0000010

position:298149:1
position: 298149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299552:1
position: 299552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298149-299552:1:exon

HB778_RS39135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39135
old locus tag: HB778_39280
inference: COORDINATES: protein motif:HMM:NF013094.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ThiF family adenylyltransferase
translation: MYDELVAHLFPGDGDEHGAVIHAGLLETRDGPVLTARDLILAVEGRDWVPGTRGYRKLLAPFISKQVRRCRDERLVYLAVHNHLGTDRVAFSDVDIESHERGFPALLDLIDGMPVGSLVFAQNAVAGDIWLPGKSRLHIDRMVVVGSCRTELRPAPSPLEKPFDLRFDRQVRVFGASGQAILARSKVAIIGLGGVGSILAELLGRLGVGSFVLVDPDRVQPSNLPRLVHATGWDAMTWLVAPGRPEWMRRLGTSLSTRKIDLVRRVISRANRKATIDRHFTSMEEKAVVEALKTCDYVFLAADGHRARRLFNAVVHQYLIPGVQLGTRIQTNDETGTVVNIHTSARLVTPGCGCLLCNQAISQQRLRDESMSGQMRQAQRYVDGDDASAPSVITLNALSASQAANDFLFYMTGLTRAEAFQGNVQQHPLDRRVKFVMPRKDASCADCGNEKQSRLSRGDGASLPLVD
SIO_010081: HB778_RS39135
subclass of: SO_0000673
so part of: HB778_RS39135
location: 298149..299552
location: region:298149-299552:1
so has part: feature:298149-299552:1:exon

WP_183465847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298149-299552:1:exon

HB778_RS39140
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39140
old locus tag: HB778_39285
so part of: sequence
location: 299733..300992
location: region:299733-300992:1
so has part: feature:299733-300992:1:exon
subclass of: SO_0000010

position:299733:1
position: 299733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300992:1
position: 300992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299733-300992:1:exon

HB778_RS39140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39140
old locus tag: HB778_39285
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878491.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair exonuclease
translation: MAFRFVHTADIHLDSPLRSLAMRNPDLAELVGDASRQAFVSIVDLCLAERVDALVIAGDLYDGDQTSMKTARFLASQMTQLHQAGIRVFKIRGNHDAMSRISKQLVFPDTVTIFSGRPQSVLQTAGGLDVMFHGLSFASPKAPDSLLPKYPAGREGAVNVGIMHTSLAGSPGHDVYAPCSVADLHSHGFDYWALGHVHVRQVHPGASTVVMPGIPQGRDINEAGEKSVTLVTIRDDRTIEVEERLTSIAQFERVNVDLTETVEWSEVVGRVRSALEDLRASVRSRHIVVRLGLSGASPLSWALIRDRDLLLAEAEQVAEHTGDTWVEKLELNVAPPAAETSEGVADPIFELAQSMRDDAGSEAFRAEARALVQKMIADLPPDGRDFAGKDEAGLELFLDRVLANGADLVTARLKAGGSQ
SIO_010081: HB778_RS39140
subclass of: SO_0000673
so part of: HB778_RS39140
location: 299733..300992
location: region:299733-300992:1
so has part: feature:299733-300992:1:exon

WP_183465849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299733-300992:1:exon

HB778_RS39145
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39145
old locus tag: HB778_39290
so part of: sequence
location: 300989..303334
location: region:300989-303334:1
so has part: feature:300989-303334:1:exon
subclass of: SO_0000010

position:300989:1
position: 300989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303334:1
position: 303334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300989-303334:1:exon

HB778_RS39145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39145
old locus tag: HB778_39290
inference: COORDINATES: protein motif:HMM:NF024904.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MRLRRLDLIRYGKFTDRTIDFGPKPDSGPDLHIVFGLNEAGKSTALSGYLDLLFGIEERSRYNFLHEYSAMRIGGVLELGGAEHSFTRTKQRTNPLLNANGQPVSEMAISAHLAGLSRDAYETMFSLDDETLEAGGKSILESRGDLGKLLFTASAGLGHASDTLSVLEAEADKLYRKQAHGTELALLKKRLAELKSGKEAIDTLASTFETLETERLDATEKYDRSIAERSVLSARLDTIAKYLRAIPILADIRRKEAQLAELPEIASPLRTWTGSIADMIETDASLRTRLSASGDELERVTTKIASVDVDAVILAISERVRGLADRKVRHVSAGLDLPSRRTELQILDNAVATCLASLGRASEQYPAKLLLPAATIGAVRTMVEQRSGIVTRVRVARDEAAAAADALQAARERVGEERAVPEPARARLVSALSTARASGYVRETKAAREAADAGAIRWEAAIARLHPWSGDAQALARIAIPNAGRLGAWKAQAAELGKSSSVLCERLAEHQGNHDLFSARLDALRASVDVTDDDAASAIRRARDEAWARHRHDLSGDTADDFAALLARDDSGAAGRLANARELVEIRSTNRNLAETAATIAHTRDQLERNSSDREAVPSEVLAVARDLLGEIPETSPEQLIELIEDRIAARIDALAAWEEIELSRKKTERAVDEEGRIRLELSGARASVGVGSDPGDSLETAMAVAELFLERQFKVDAERTEALKTVGTRQEDLAARRRAIEVAERREDEWLAGVAEALKGTWLESGISATGVGGRPRSIG
SIO_010081: HB778_RS39145
subclass of: SO_0000673
so part of: HB778_RS39145
location: 300989..303334
location: region:300989-303334:1
so has part: feature:300989-303334:1:exon

WP_244662191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300989-303334:1:exon

HB778_RS42475
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42475
so part of: sequence
location: 303327..304460
location: region:303327-304460:1
so has part: feature:303327-304460:1:exon
subclass of: SO_0000010

position:303327:1
position: 303327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304460:1
position: 304460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303327-304460:1:exon

HB778_RS42475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELSKCLQDRDAMRLRIEKMEADRDNFLVEVTAVAAEAGEAANDDEPEQLAVRLAERLERAERMREAKAGLVNDLQRLQDAREILDAEIAAHERRKNEVLSVFGVATLADVVQRDELLRDRDRLRSAVAELEEQVASGLAVEGFEQARSILDAVDLDSLAIEKAEVEQRLRDLDEALQQQLIRQTRATDKLDAIGGDAAVARIDAERRTVLLEIEEKAVRYIELKLGIMSAGNALRLYRERHRSGMMQRASDAFALMTRGQYSGLTTQPVKGGEVLIALQRDGQSKVADALSKGARFQLYLALRLAGYYEFAQFRPSVPFIADDIMETFDHVRSEEVFRLFGEMANAGQVIYLTHHQHLCQIAKAVVPSVAIHELG
SIO_010081: HB778_RS42475
subclass of: SO_0000673
so part of: HB778_RS42475
location: 303327..304460
location: region:303327-304460:1
so has part: feature:303327-304460:1:exon

WP_244662192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303327-304460:1:exon

HB778_RS39150
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39150
old locus tag: HB778_39295
so part of: sequence
location: 304650..305312
location: region:304650-305312:1
so has part: feature:304650-305312:1:exon
subclass of: SO_0000010

position:304650:1
position: 304650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305312:1
position: 305312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304650-305312:1:exon

HB778_RS39150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39150
old locus tag: HB778_39295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013961679.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6088 family protein
translation: MATSPSRTVWTPADFLDLGNRNAVDKVLQRMVKAAELRRIDRGLYDRPTFNTLTQQKSPPDPRSVIDAVARRDQIRVLVDGMTAANDLGLTDAVPARIVVHADARLRPIRLGNLDITFRPTSASKLYWAGRPAMRVVQALHWIRDMLGQDDGNQKLLRRLRRLLNDPDQGDRLRADLADGLPTLPAWMQVLLKPLLQDAAEVSQGQIQPSGTTPLKMPSQ
SIO_010081: HB778_RS39150
subclass of: SO_0000673
so part of: HB778_RS39150
location: 304650..305312
location: region:304650-305312:1
so has part: feature:304650-305312:1:exon

WP_244662193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304650-305312:1:exon

HB778_RS39155
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39155
old locus tag: HB778_39300
so part of: sequence
location: 305309..306361
location: region:305309-306361:1
so has part: feature:305309-306361:1:exon
subclass of: SO_0000010

position:305309:1
position: 305309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306361:1
position: 306361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305309-306361:1:exon

HB778_RS39155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39155
old locus tag: HB778_39300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013961680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MNSAYAQVLSADAETRAGLFTTTAQRLNSTPQNIEKDFWVCWTLDALFNRMPDGSPRLLFKGGTSLSKGFGLISRFSEDIDVTVFRDDLGEGTSIAELQNLSRTKREAKLDAIKDACTAYIQGPMAEALTALVAASAERTGLPLEDFQVRTDDDDRQTLLLWYPTATPIEAYVRPAVKIESGAKSALDPNTPQIIRPYVDEDVPGLDLSVANVTTVDPERTFWDKVVILHGLRRWFERRGELRGGGQRISRHYYDIHRLMESETGRRAIANRDLGADCVAHARMFFNRKDYDLASAEPPTFALLPHDEMVDALRRDYGAMTAMIFGPVPNFDLVLESVQRLEILLNAPEG
SIO_010081: HB778_RS39155
subclass of: SO_0000673
so part of: HB778_RS39155
location: 305309..306361
location: region:305309-306361:1
so has part: feature:305309-306361:1:exon

WP_183465853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305309-306361:1:exon

HB778_RS39160
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39160
old locus tag: HB778_39305
pseudo: true
so part of: sequence
location: 306691..>307155
location: region:306691-307155:1
so has part: feature:306691-307155:1:exon
subclass of: SO_0000010

position:306691:1
position: 306691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307155:1
position: 307155
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306691-307155:1:exon

HB778_RS39160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39160
old locus tag: HB778_39305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533319.1
GO function: GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-methyl-2-oxobutanoate hydroxymethyltransferase
SIO_010081: HB778_RS39160
subclass of: SO_0000673
so part of: HB778_RS39160
location: 306691..>307155
location: region:306691-307155:1
so has part: feature:306691-307155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306691-307155:1:exon

HB778_RS39165
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39165
old locus tag: HB778_39310
so part of: sequence
location: complement(307205..307921)
location: region:307205-307921:-1
so has part: feature:307205-307921:-1:exon
subclass of: SO_0000010

position:307205:-1
position: 307205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307921:-1
position: 307921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307205-307921:-1:exon

HB778_RS39165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39165
old locus tag: HB778_39310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015914829.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MTRFSRDPLYRRHRFPAQVIAHAVWLYFRFPLSLRMVEDMLAARGVIVSHQTVRLWAEKFGRHFANDIRKRSAGELGDKWHLDEVVITIGGKKHWLWRAVDQDGFVLDVLVQSRRNAKAAKRLMRKLLKGQGRSPRVMITDKLRSYGAAKREIMPGVEHRSHKGLNNRAENSHQPVRRRERIMKRFKSARHLQRFVSVHDPIANLFNVPRHDIPSTHHRELRATAMQAWRQIARLHAE
SIO_010081: HB778_RS39165
subclass of: SO_0000673
so part of: HB778_RS39165
location: complement(307205..307921)
location: region:307205-307921:-1
so has part: feature:307205-307921:-1:exon

WP_183455411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307205-307921:-1:exon

HB778_RS39170
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39170
old locus tag: HB778_39315
pseudo: true
so part of: sequence
location: complement(<307971..308129)
location: region:307971-308129:-1
so has part: feature:307971-308129:-1:exon
subclass of: SO_0000010

position:307971:-1
position: 307971
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:308129:-1
position: 308129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307971-308129:-1:exon

HB778_RS39170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39170
old locus tag: HB778_39315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654560.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS39170
subclass of: SO_0000673
so part of: HB778_RS39170
location: complement(<307971..308129)
location: region:307971-308129:-1
so has part: feature:307971-308129:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307971-308129:-1:exon

HB778_RS39175
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39175
old locus tag: HB778_39320
so part of: sequence
location: complement(308154..309089)
location: region:308154-309089:-1
so has part: feature:308154-309089:-1:exon
subclass of: SO_0000010

position:308154:-1
position: 308154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309089:-1
position: 309089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308154-309089:-1:exon

HB778_RS39175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39175
old locus tag: HB778_39320
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MSIVDAGSFCRAAATIHVAQPALSQQIAGLEATLGATLLHRSARGVCPTQVGKIFYREAVSILQRVEQLRGIVRSTGGEPEGSVGLGISSSLAVSLAGPLAGACRTALPKVTLRLVTGDFLRISSLIESHELDVCLVFEDTPTHGVSRKPLFRQRLYLVRPANAENVATSVSLEELAGLPLVLPAQPHTIRVALDRAFGAAEVIPNCVAEVDTFCSVLSLVKAGVASAIVPKGDFSDVPGYEALRPVVIDPPIHLTVCLISSAHMPLTSAAEAASALLGAQLEKHLSEACPPNGSASQLSSCEGAVTLIEG
SIO_010081: HB778_RS39175
subclass of: SO_0000673
so part of: HB778_RS39175
location: complement(308154..309089)
location: region:308154-309089:-1
so has part: feature:308154-309089:-1:exon

WP_183455412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308154-309089:-1:exon

HB778_RS39180
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39180
old locus tag: HB778_39325
so part of: sequence
location: 310447..310710
location: region:310447-310710:1
so has part: feature:310447-310710:1:exon
subclass of: SO_0000010

position:310447:1
position: 310447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310710:1
position: 310710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310447-310710:1:exon

HB778_RS39180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39180
old locus tag: HB778_39325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKTILHIRLCIMQVVSGGLKFATTVHNRQNVELFGAGWNWRLLNRLPPTGQLASLPTNQFIRRGQDQPAQAGDQMISVCWSIGGEL
SIO_010081: HB778_RS39180
subclass of: SO_0000673
so part of: HB778_RS39180
location: 310447..310710
location: region:310447-310710:1
so has part: feature:310447-310710:1:exon

WP_183455413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310447-310710:1:exon

HB778_RS39185
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39185
old locus tag: HB778_39330
so part of: sequence
location: 310707..311918
location: region:310707-311918:1
so has part: feature:310707-311918:1:exon
subclass of: SO_0000010

position:310707:1
position: 310707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311918:1
position: 311918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310707-311918:1:exon

HB778_RS39185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39185
old locus tag: HB778_39330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: F-box protein
translation: MTGIDERGKAPMAIFSAIEGDITDDSPALPAVGVEGPGQSSRSVVAHTRSEPQASSVSSSRRMRHTSVLDLQQELLCQIAERLSPTDLLSMSQTNQQMYHATTAIWMPQEGRERAIRAQAIWNRLTQDRPGVEDRLAPLLYGGRDPITRGQLQLPRLGAAGELQQRLILLTETLEDPDNRVTALWGFGVGMAGLAPELQQRLVVLAEGLDDDAELCASALESLGAGVAGLDPVLQQRVVVLAEGLEGAEHRASALQGLGAGVAGLAPELQERLVVLAEGLENARHRGSALMGLGAGLRGLAPDLQQRLVVLAEGIDDPEGRVSALWGFGAGIGGLALELQQRLVVLAEGIGDPENRGRALKAFGTGVAALPRELRGRIAALADGLAQPQHRTPALAGLLPRLC
SIO_010081: HB778_RS39185
subclass of: SO_0000673
so part of: HB778_RS39185
location: 310707..311918
location: region:310707-311918:1
so has part: feature:310707-311918:1:exon

WP_183465855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310707-311918:1:exon

HB778_RS39190
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39190
old locus tag: HB778_39335
so part of: sequence
location: 311919..313838
location: region:311919-313838:1
so has part: feature:311919-313838:1:exon
subclass of: SO_0000010

position:311919:1
position: 311919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313838:1
position: 313838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311919-313838:1:exon

HB778_RS39190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39190
old locus tag: HB778_39335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015317132.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter assembly complex family protein
translation: MPVYGRQMSVGSAPGGALLHALLLAVVCSTALAAQSRSAAAFELFGLKLWAPSSDEDADTVDPLRYTVTIEAPDADEDIAEKLENASALKDDEERPVSGSLGLLAKARGDRDQLVAALYADARYEGVVTITIEGKPLDDLPPDAEFSGPQPIPVVINIAAGPKFTLGDIRLEGDAAGLMSADYGLISGGDASSGAVLEAEALIVRTLKERGMPLAEVTDRQIVANHTTSTLDVTLTVAAGPAAGYGNTTVEGTEKVDRNFAEYMTGLKRGRQYSPEEVDEARDRLLALEVFNSVTLKEADKLDADGNIPIGVEVSDRKPRYFGLGGTFSNTDSLDLKGYWGHRNLFGRAEKLRIEGAISGIGSKPSELNYNAGIMFEKMIGPASKFFAGVKTVLEHPDAYEHFSVKANTGLSYELDKQQTVSAEVALDYSEITDPFGEHKYLIASIPLQYVYDDRDDRLNPTSGFRVLTSADPSRDIMSGAAFLLLTGEGSAYQSLDSASKFVLAERVAVGSIVGTSLQNVPANRRFYSGGGGSVRGYGYKGIGPKDFTGQPIGGLSFFETSLEMRIAVTDKIGIVPFVDAGTVSNMSVPNFSDVKVGAGVGLRYFTPFGPLRIDAAVPFNRGPDDPHFGIYAGMGQAF
SIO_010081: HB778_RS39190
subclass of: SO_0000673
so part of: HB778_RS39190
location: 311919..313838
location: region:311919-313838:1
so has part: feature:311919-313838:1:exon

WP_183465857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311919-313838:1:exon

HB778_RS39195
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39195
so part of: sequence
location: 314083..314247
location: region:314083-314247:1
so has part: feature:314083-314247:1:exon
subclass of: SO_0000010

position:314083:1
position: 314083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314247:1
position: 314247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314083-314247:1:exon

HB778_RS39195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39195
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAREVAIHWWPLALLSKSFCADRIGAERIPTRKSAVVGTQPPTQGGEAIGGDVE
SIO_010081: HB778_RS39195
subclass of: SO_0000673
so part of: HB778_RS39195
location: 314083..314247
location: region:314083-314247:1
so has part: feature:314083-314247:1:exon

WP_183455416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314083-314247:1:exon

HB778_RS39200
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39200
old locus tag: HB778_39345
so part of: sequence
location: complement(314622..315278)
location: region:314622-315278:-1
so has part: feature:314622-315278:-1:exon
subclass of: SO_0000010

position:314622:-1
position: 314622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315278:-1
position: 315278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314622-315278:-1:exon

HB778_RS39200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39200
old locus tag: HB778_39345
inference: COORDINATES: protein motif:HMM:NF018970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YscO family type III secretion system apparatus protein
translation: MDRLLELKKMRRRRAEDALRLRHTTLDNAVAVVGTALTDLRRWREDLPAREAALYDPLIGEAAALIDLDEVNAKMISLRQHEQLLQQHLEQARAQTDLARQAREEAYGTAREAGREVSKFESLVRALRSDATLEEERSADLESEDFAQRQTRLGREQDDNVSVNLHPMWSGHSLSEFTDRDCADPGKRFWSVLGCAILTDVERGHVEADTSETTSGGR
SIO_010081: HB778_RS39200
subclass of: SO_0000673
so part of: HB778_RS39200
location: complement(314622..315278)
location: region:314622-315278:-1
so has part: feature:314622-315278:-1:exon

WP_183465859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314622-315278:-1:exon

HB778_RS39205
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctN
locus tag: HB778_RS39205
old locus tag: HB778_39350
so part of: sequence
location: complement(315290..316555)
location: region:315290-316555:-1
so has part: feature:315290-316555:-1:exon
subclass of: SO_0000010

position:315290:-1
position: 315290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316555:-1
position: 316555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315290-316555:-1:exon

HB778_RS39205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctN
locus tag: HB778_RS39205
old locus tag: HB778_39350
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008546282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system ATPase SctN
translation: MHVRGRVLQIVGTVIRAMAPGARIGDLCTLRNPENNFELSAEVVGVQCDVAILTPLGEMQGLSTLTEVIPTGKPLMVPTGWNLLGRVLDGFGRPLDTSTNGPLLSEDRVPVYREAPDPLTRRIIDNVLPVGIRAIDGLLTCGEGQRIGIFAAAGGGKSTLMSMLVRGAAVDVIVIALIGERGREVQELIEHSVDAEARSRVVLVVASSDRSATERAKAAYVATTIAEWYRDQGKRVLLLMDSVTRFARALREIGLAAGEPPTRRGFPPSVFASLPRLMERTGNNHLGSITAFYTVLVEGDDMAEPVADETRSVLDGHIVLSRALAMSNHYPAIDILASVSRVMSAIVSSDHELLAGSLRQLMAKYQEVELLVRVGEYRKGADPLVDAAIAKIDQVRRFLRQSTNEQIGFDAMLDELAACLA
SIO_010081: HB778_RS39205
subclass of: SO_0000673
so part of: HB778_RS39205
location: complement(315290..316555)
location: region:315290-316555:-1
so has part: feature:315290-316555:-1:exon

WP_244662201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315290-316555:-1:exon

HB778_RS39210
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39210
old locus tag: HB778_39355
so part of: sequence
location: complement(316657..317313)
location: region:316657-317313:-1
so has part: feature:316657-317313:-1:exon
subclass of: SO_0000010

position:316657:-1
position: 316657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317313:-1
position: 317313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316657-317313:-1:exon

HB778_RS39210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39210
old locus tag: HB778_39355
inference: COORDINATES: protein motif:HMM:NF014196.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FliH/SctL family protein
translation: MVALVQLTPASAGILGPGRILPAGSAQTLIDAEQVLTQARREANALIDAARGSARAIEVRAKEAGLAAAQAAIEARLTAIATDSLRIMAQNEAQIIDMGLQIARRIIDTIEPVEAAVQIAMRGLKFAGHNSLVRVRVAPSLLEAVRNRLDEILPTATSRAVVDLIADARVKDAGCILETDAGLVDATIESQLAAIESGLRSALLDSAKPNHSDVGTPR
SIO_010081: HB778_RS39210
subclass of: SO_0000673
so part of: HB778_RS39210
location: complement(316657..317313)
location: region:316657-317313:-1
so has part: feature:316657-317313:-1:exon

WP_183465861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316657-317313:-1:exon

HB778_RS39215
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39215
old locus tag: HB778_39360
so part of: sequence
location: complement(317292..317921)
location: region:317292-317921:-1
so has part: feature:317292-317921:-1:exon
subclass of: SO_0000010

position:317292:-1
position: 317292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317921:-1
position: 317921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317292-317921:-1:exon

HB778_RS39215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39215
old locus tag: HB778_39360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYCIADPAADLDFTMVHGWPEWMPLDSAHTDPFTRVKLGCWLLRGQRDEPSAIIFAGAARRSRLAFLPAPDAVRLMRLAGAWVGVSGLTRLLRTSEIVAARANLGEEAVAFASQAALLPRPTAELMSALGVSDIPSAPSALLQCGAAMFGLAIGDIPQMLRTRLGLRRPAPIWAAAVDKCRDDNAGEDAFYAMRRLIRKRMPQWSHWFS
SIO_010081: HB778_RS39215
subclass of: SO_0000673
so part of: HB778_RS39215
location: complement(317292..317921)
location: region:317292-317921:-1
so has part: feature:317292-317921:-1:exon

WP_183465863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317292-317921:-1:exon

HB778_RS39220
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39220
old locus tag: HB778_39365
so part of: sequence
location: complement(318227..318799)
location: region:318227-318799:-1
so has part: feature:318227-318799:-1:exon
subclass of: SO_0000010

position:318227:-1
position: 318227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318799:-1
position: 318799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318227-318799:-1:exon

HB778_RS39220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39220
old locus tag: HB778_39365
inference: COORDINATES: protein motif:HMM:NF013664.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIYADGWHDFVLKRLATLLLLLTLGSCESKLELYRDLPAHEANEMLALLMSQGIYAEKTTDNSGTASLSVDIRDVPPAMEVLNGAGLPHDPYADMGSLFKNEGMISSPKEERVRYIYGITQELSRTLSIFDGVLNARVHVVSPEEASDDRRPSFPLERCCACPLHTRHYGRSDGTKNQGARRKQLGRPIL
SIO_010081: HB778_RS39220
subclass of: SO_0000673
so part of: HB778_RS39220
location: complement(318227..318799)
location: region:318227-318799:-1
so has part: feature:318227-318799:-1:exon

WP_183465865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318227-318799:-1:exon

HB778_RS39225
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctI
locus tag: HB778_RS39225
old locus tag: HB778_39370
so part of: sequence
location: complement(318796..319215)
location: region:318796-319215:-1
so has part: feature:318796-319215:-1:exon
subclass of: SO_0000010

position:318796:-1
position: 318796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319215:-1
position: 319215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318796-319215:-1:exon

HB778_RS39225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctI
locus tag: HB778_RS39225
old locus tag: HB778_39370
inference: COORDINATES: protein motif:HMM:NF028311.2
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system inner rod subunit SctI
translation: MSSISPLAVTSVLPTDAAFVSELPTESLDAFRAEFHRSELSPHHDQSATDAIDESTEVARGSGVARTPGDAILSSMEKLSASFTHAVEAAHSTAGMEEIHSGDWLNAQLALSALSLECDMLAKVVGKATQSLDNFLRNQ
SIO_010081: HB778_RS39225
subclass of: SO_0000673
so part of: HB778_RS39225
location: complement(318796..319215)
location: region:318796-319215:-1
so has part: feature:318796-319215:-1:exon

WP_183455422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318796-319215:-1:exon

HB778_RS39230
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39230
old locus tag: HB778_39375
so part of: sequence
location: 320137..320922
location: region:320137-320922:1
so has part: feature:320137-320922:1:exon
subclass of: SO_0000010

position:320137:1
position: 320137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320922:1
position: 320922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320137-320922:1:exon

HB778_RS39230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39230
old locus tag: HB778_39375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPTSTEHVMSVALGHLLKSSDRFSASSVGVARVELAVDDVGIVLEATGLRSARLISRIAKTLPDNEGEIRELLGENLLYCVSAQVALCADGGGALLLWTDIDNVDGDRTVVREQMTSFCNAVIYWDGISRRHRSVKQSLLSRDQNFARDLDIHWRNACDPADQRTDGKDVDRTLESARQTITQVESFLREGQEQFGRQAELFGDYAITDDVISAFVEAQDEGFRQAYTCERQAVLRDVMTPMSNQLPVRGPRVKPMRQRV
SIO_010081: HB778_RS39230
subclass of: SO_0000673
so part of: HB778_RS39230
location: 320137..320922
location: region:320137-320922:1
so has part: feature:320137-320922:1:exon

WP_183455423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320137-320922:1:exon

HB778_RS39235
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39235
old locus tag: HB778_39380
so part of: sequence
location: 320927..321463
location: region:320927-321463:1
so has part: feature:320927-321463:1:exon
subclass of: SO_0000010

position:320927:1
position: 320927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321463:1
position: 321463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320927-321463:1:exon

HB778_RS39235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39235
old locus tag: HB778_39380
inference: COORDINATES: protein motif:HMM:TIGR02552.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SycD/LcrH family type III secretion system chaperone
translation: MTQKVEEPVTGGGEVDTSEAGRLARLTEEIIGGRTDLAAVIGITDDELDAVYALGHRFYSAGRYGEALSFFRFLCIHRYIDPRFWFGFGAASQMLGDSANAVRAYGLAALLNDEDPQIPLRAAKCLIKLDQPAAAVSALESVLALSGGNPEHRAFAQHASLMLRQLRPESACERGSDA
SIO_010081: HB778_RS39235
subclass of: SO_0000673
so part of: HB778_RS39235
location: 320927..321463
location: region:320927-321463:1
so has part: feature:320927-321463:1:exon

WP_183455424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320927-321463:1:exon

HB778_RS39240
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctE
locus tag: HB778_RS39240
old locus tag: HB778_39385
so part of: sequence
location: 321456..322475
location: region:321456-322475:1
so has part: feature:321456-322475:1:exon
subclass of: SO_0000010

position:321456:1
position: 321456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322475:1
position: 322475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321456-322475:1:exon

HB778_RS39240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctE
locus tag: HB778_RS39240
old locus tag: HB778_39385
inference: COORDINATES: protein motif:HMM:NF016759.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system translocon subunit SctE
translation: MHNVSMTEAIGGMLLKAGVLTQVDAPLSNFSAGFSKSGAELALPPVSGGAPASDAVPMLPPPRAFDAMELAAKFLALKMKMADGQAAAGMEDIRHRGELQKQQNEKIARNIIDAAEKLREAKKSSSAARIFGWIAVALSVVAAVVTGGIFAFSAAAVAVAVGTLTETGVIERMTQAIAKSLIEDQGMAEDCAVIWASIITALIILASSAACMVGAGAVSGGWNAVTSIATKITSQGDKLAKIANVSQRLATAALAGEGTASAAESCAGLVSGIFKYQATNARVETLDIRKFLGRLAQLQEDEMARIQELVVGIKTMTQRVVDAIEAQCRSASTVIRHIG
SIO_010081: HB778_RS39240
subclass of: SO_0000673
so part of: HB778_RS39240
location: 321456..322475
location: region:321456-322475:1
so has part: feature:321456-322475:1:exon

WP_183455425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321456-322475:1:exon

HB778_RS39245
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39245
old locus tag: HB778_39390
so part of: sequence
location: 322524..323639
location: region:322524-323639:1
so has part: feature:322524-323639:1:exon
subclass of: SO_0000010

position:322524:1
position: 322524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323639:1
position: 323639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322524-323639:1:exon

HB778_RS39245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39245
old locus tag: HB778_39390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLHTVVQANDSRGPRLPGGDLDEHWPFLPMSATSNVMGVRYGELITTPADLFKLASAGSPTLADIVVQNKGAETGLGARLASVDIYAVGALLHSLSLKLRESARLDRQAARDCDIAAQEAAAKALRASGICELVGTLLTSAFAIAGAGVSIMGASKAQTRFDAKLSGLNGPGFRAAEPSPKASQPPAVDQNRIYRALRASGIRELVGTLLTSAFAIAGARVSTKGASKARTRLDAKLSGSKEASFRADLQQPEPKLVPEPSLQASQPPPVDLTRIYKAQQVAHETTMIWSGLATGMNEVGKIPGAAFKMGATGEQEKKAKLEAEGTKMRSRADDESEFKLAYEKMIQDVLEKLSEVRRADADTRSKIVNMG
SIO_010081: HB778_RS39245
subclass of: SO_0000673
so part of: HB778_RS39245
location: 322524..323639
location: region:322524-323639:1
so has part: feature:322524-323639:1:exon

WP_183455426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322524-323639:1:exon

HB778_RS39250
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39250
old locus tag: HB778_39395
so part of: sequence
location: 323681..324211
location: region:323681-324211:1
so has part: feature:323681-324211:1:exon
subclass of: SO_0000010

position:323681:1
position: 323681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324211:1
position: 324211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323681-324211:1:exon

HB778_RS39250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39250
old locus tag: HB778_39395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNVIPPNQLSRDASNIPRAGGDLSALALLVQIERFSLLEDQVRDEFDDMQKRNDWLKTANSALAALRANRPDDKGIRSYGEFVDAHGETQNTHQWMLANGIAIEQKAGDTSGVQSDFDAAISNLKARIDTENSESQMALIRLQSLLDKVNRCVELATNLVAKDGKAKENIIANIR
SIO_010081: HB778_RS39250
subclass of: SO_0000673
so part of: HB778_RS39250
location: 323681..324211
location: region:323681-324211:1
so has part: feature:323681-324211:1:exon

WP_183455427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323681-324211:1:exon

HB778_RS39255
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39255
old locus tag: HB778_39400
so part of: sequence
location: 324516..326384
location: region:324516-326384:1
so has part: feature:324516-326384:1:exon
subclass of: SO_0000010

position:324516:1
position: 324516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326384:1
position: 326384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324516-326384:1:exon

HB778_RS39255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39255
old locus tag: HB778_39400
inference: COORDINATES: protein motif:HMM:NF012485.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: secretin N-terminal domain-containing protein
translation: MERKLPVVSDSRRVSLDYSNADIRQVAQDVVRDVMGMPVTIDPGVGGKMTLHTARQVPASEVPRLLDKALAPHGYGLAAGDQGVRVGRLVDLAGGVQSNVQVIPVRYVDPAEVIGVIRPNLEEGVHLTPAPGGRGIVVSGPPGSVSSVRELVGLFDTDAMLHKSFALYKLSRASPADIERELSLLFTKNGQDRVLVQFAALERLNGILVVAEDSAALKQVRRAIIKLDSSSEATANIHVRPLLYRRASEMAQVLAQTFGADAISAVSRAQPAGRFGNLSVGSGVSNQASLPVNVPGLPAEMPDSNVPSTHPVDERGMSPNRLGLSAPVRIQADQGQNALVVLAAPHDYKIVEAAIRQLDVKPRQVLIQAIIAEVRLNDSLRYGVDYLLSTRSLGAVPNGLSYVFPSTDVNIVLHGLSALGEVKVVSAPRILAVDNQTATIQVGDQVPILVRSSQSNIGENSPIVSDVEMRDTGVILAVTPRIGAGGSITLDTFQEVSTGNRNTLTNVQSPVISVRRLQSTVSMRNGDTIAIGGLMQDSTNQADSGVPVLKDIPLLGGLFRSTEYGKERTELLILLNPRVVDSDADARALTQELREKFELLAPDLGRRLTPAAQPQRPVPRRR
SIO_010081: HB778_RS39255
subclass of: SO_0000673
so part of: HB778_RS39255
location: 324516..326384
location: region:324516-326384:1
so has part: feature:324516-326384:1:exon

WP_183455428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324516-326384:1:exon

HB778_RS39260
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39260
old locus tag: HB778_39405
so part of: sequence
location: complement(326833..328173)
location: region:326833-328173:-1
so has part: feature:326833-328173:-1:exon
subclass of: SO_0000010

position:326833:-1
position: 326833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328173:-1
position: 328173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326833-328173:-1:exon

HB778_RS39260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39260
old locus tag: HB778_39405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012977037.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MNDLTLPLSGLSSVGGKSVVARFNGGMLSSNCGVLVLAEVEKRLRVADRLARCIDDPRCPDQVVHSLADMIGFRMKMIAAGYEDGNDANRLRSDPVFKMAQDALPSGRDLASQSTICRLENLPGVRELVAMGRAMIDLYCASFRQVPKRIVLDIDDTFDAVHGGQQLRLFNAHYDEYGFQPIVVFDGAGRFVSAILRPARRPSGAEICPHLRRLVRAIRSNWPNTRILIRADSHYCGPQVIDWCRANGVDFILGVAPTTTLREHVAHLEATTLARFEASAKSNKVRRFKEFFDGAASWSRVERIIARVEVGAKGADTRFIVTNLASGKAKALYEDLYCRRGAAENHIKSWKTHLAADRTSCTRATANQFRLFLHAGAYWLMWGLRAAMPKRLSFAVAQFDTLRLRLIKIAARVVEMKTQIRLQLPTSCPDQRILRIVLDRIPQLAT
SIO_010081: HB778_RS39260
subclass of: SO_0000673
so part of: HB778_RS39260
location: complement(326833..328173)
location: region:326833-328173:-1
so has part: feature:326833-328173:-1:exon

WP_183465868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326833-328173:-1:exon

HB778_RS39265
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39265
old locus tag: HB778_39410
pseudo: true
so part of: sequence
location: 328521..>328790
location: region:328521-328790:1
so has part: feature:328521-328790:1:exon
subclass of: SO_0000010

position:328521:1
position: 328521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328790:1
position: 328790
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328521-328790:1:exon

HB778_RS39265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39265
old locus tag: HB778_39410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654624.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS39265
subclass of: SO_0000673
so part of: HB778_RS39265
location: 328521..>328790
location: region:328521-328790:1
so has part: feature:328521-328790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328521-328790:1:exon

HB778_RS39270
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39270
old locus tag: HB778_39415
so part of: sequence
location: complement(328893..330545)
location: region:328893-330545:-1
so has part: feature:328893-330545:-1:exon
subclass of: SO_0000010

position:328893:-1
position: 328893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330545:-1
position: 330545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328893-330545:-1:exon

HB778_RS39270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39270
old locus tag: HB778_39415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612018.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MSAPIDLSHFPDLPAEVVNAFAAVQFELSVERAARQHEQAVVAEKDAFITELKELIEKLESQVQDYRRTKFGPKSEKLDPTQMELALEDLETAIAETQAQIAFVEEKIAASTANCEKTASRRQRKARALPQSLPRVEQVIEPDSIACPCGCGNMVRIGEDRTERLDHIPARYQVIVAIRPKYACPKGRTGVVRARAPAHLLEGSWPTEALLAQIAVSKHSEHMPLNRQAAVMARHGVPIDRTVLADWLGRTGAVIAPVVDHMAMILKQGSSRLYVDETTAPVLDPGRGKTKTGYLWAILRDDRGWNGSAPPGVVFHYRPGRKGEYAAEILDGFNGTIQVDAYGGYSHLATPKRTGRDPLRLAFCWAHGRRKLIKSQPKKGSPIVDEALLRIAALYKIEDSIRGCDPDHRRAVRQHLSCPLVDEFFTWLTVQAARVSRKSDLGEAMAYMLKRQVGFRLFLDDGRVDIDSNLVENAIRSPAMNRRNALFAGHDEGGRNWARFASLIGTCKMNRVEPYAYLRDLFISLANGHLAKDIDALMPWAYAQRISASQ
SIO_010081: HB778_RS39270
subclass of: SO_0000673
so part of: HB778_RS39270
location: complement(328893..330545)
location: region:328893-330545:-1
so has part: feature:328893-330545:-1:exon

WP_183465870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328893-330545:-1:exon

HB778_RS39275
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS39275
old locus tag: HB778_39420
so part of: sequence
location: complement(330610..330963)
location: region:330610-330963:-1
so has part: feature:330610-330963:-1:exon
subclass of: SO_0000010

position:330610:-1
position: 330610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330963:-1
position: 330963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330610-330963:-1:exon

HB778_RS39275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS39275
old locus tag: HB778_39420
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIVAGQRLPILIATRPVDFRCGHQALALMVQTELKLDPHSGVTVIFRSKRGNRVKILVWDGTGMVLTYKILEQGSFAWPKVQDGTMRLSRGQYEALFEGLDWRRVVAQRVAPPAAAG
SIO_010081: HB778_RS39275
subclass of: SO_0000673
so part of: HB778_RS39275
location: complement(330610..330963)
location: region:330610-330963:-1
so has part: feature:330610-330963:-1:exon

WP_127420643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330610-330963:-1:exon

HB778_RS39280
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39280
old locus tag: HB778_39425
so part of: sequence
location: complement(330960..331412)
location: region:330960-331412:-1
so has part: feature:330960-331412:-1:exon
subclass of: SO_0000010

position:330960:-1
position: 330960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331412:-1
position: 331412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330960-331412:-1:exon

HB778_RS39280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39280
old locus tag: HB778_39425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014531097.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MADGEGFVGRCEVVEPRRGNRRWPNDLKARIVAESLQRGARVVDVARRHDLIAHQLSDWRRQARQGLLALPAELMPVPCENSGPFEPAFVPLAITTEPKEAADALPVPEPVEIILGIMTVEIGADLVVRVPGDVPVDRVAALVRAMRGTA
SIO_010081: HB778_RS39280
subclass of: SO_0000673
so part of: HB778_RS39280
location: complement(330960..331412)
location: region:330960-331412:-1
so has part: feature:330960-331412:-1:exon

WP_183455431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330960-331412:-1:exon

HB778_RS39285
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39285
old locus tag: HB778_39435
pseudo: true
so part of: sequence
location: <331510..331938
location: region:331510-331938:1
so has part: feature:331510-331938:1:exon
subclass of: SO_0000010

position:331510:1
position: 331510
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:331938:1
position: 331938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331510-331938:1:exon

HB778_RS39285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39285
old locus tag: HB778_39435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611992.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: HB778_RS39285
subclass of: SO_0000673
so part of: HB778_RS39285
location: <331510..331938
location: region:331510-331938:1
so has part: feature:331510-331938:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331510-331938:1:exon

HB778_RS39290
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctQ
locus tag: HB778_RS39290
old locus tag: HB778_39440
so part of: sequence
location: 332846..333568
location: region:332846-333568:1
so has part: feature:332846-333568:1:exon
subclass of: SO_0000010

position:332846:1
position: 332846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333568:1
position: 333568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332846-333568:1:exon

HB778_RS39290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctQ
locus tag: HB778_RS39290
old locus tag: HB778_39440
inference: COORDINATES: protein motif:HMM:TIGR02551.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system cytoplasmic ring protein SctQ
translation: MREILFDIVLREVAIQVERWCGQRPIWSSSEITEVLPYAIGIVRLDGPDKLLGLVEFDADGLEWITICCCDRMPVVCALLDDLALSLDLRVARVSLSLAELQALAPRDVILLDASPVARDGAMTVLLCLSGNARFRASILDGRLAVLSAVDHMMGKSDSLPSETFDSIDLVVDVEVGRLTMSLKQLRELAVGQVLDLGFDATTNITLRVNGQVVAAGELVRIADRTGVRVADIRLKRAES
SIO_010081: HB778_RS39290
subclass of: SO_0000673
so part of: HB778_RS39290
location: 332846..333568
location: region:332846-333568:1
so has part: feature:332846-333568:1:exon

WP_183455432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332846-333568:1:exon

HB778_RS39295
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctR
locus tag: HB778_RS39295
old locus tag: HB778_39445
so part of: sequence
location: 333565..334227
location: region:333565-334227:1
so has part: feature:333565-334227:1:exon
subclass of: SO_0000010

position:333565:1
position: 333565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334227:1
position: 334227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333565-334227:1:exon

HB778_RS39295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctR
locus tag: HB778_RS39295
old locus tag: HB778_39445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009965799.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctR
translation: MNTGLPDPVTMIALIGAIAVVPFLAITVTSYVKLVVVFGLIRNALGVQNIPPNMAMNAVAILLSVYIMQPAAKNAYEAVRHKEIVFEDLRGLGETIPLAVEPFRNFLLKNTSQQERQFFANATRELWNERDADAVSDSDFMIVIPAFITSELADAFKIGFLLFLPFIVIDLVISNILLAMGMMMVSPMTISLPFKLFLFVSVNGWQRLIHGLVLSYAGPS
SIO_010081: HB778_RS39295
subclass of: SO_0000673
so part of: HB778_RS39295
location: 333565..334227
location: region:333565-334227:1
so has part: feature:333565-334227:1:exon

WP_183455433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333565-334227:1:exon

HB778_RS39300
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctS
locus tag: HB778_RS39300
old locus tag: HB778_39450
so part of: sequence
location: 334227..334490
location: region:334227-334490:1
so has part: feature:334227-334490:1:exon
subclass of: SO_0000010

position:334490:1
position: 334490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334227-334490:1:exon

HB778_RS39300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctS
locus tag: HB778_RS39300
old locus tag: HB778_39450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013949073.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctS
translation: MSTATLANMAVDALKLTLVLSMPTIVVATAVGLVVSLVQALTQVNEQTLPFAVKLICVSLVLMTTGSWIGGELYQYTLNVFDNIGAM
SIO_010081: HB778_RS39300
subclass of: SO_0000673
so part of: HB778_RS39300
location: 334227..334490
location: region:334227-334490:1
so has part: feature:334227-334490:1:exon

WP_183455434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334227-334490:1:exon

HB778_RS39305
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctT
locus tag: HB778_RS39305
old locus tag: HB778_39455
so part of: sequence
location: 334672..335391
location: region:334672-335391:1
so has part: feature:334672-335391:1:exon
subclass of: SO_0000010

position:334672:1
position: 334672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335391:1
position: 335391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334672-335391:1:exon

HB778_RS39305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctT
locus tag: HB778_RS39305
old locus tag: HB778_39455
inference: COORDINATES: protein motif:HMM:TIGR01401.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctT
translation: MLIIPILGRGIMTGLARNGTITALSFPVMAHAWATRPANLDTWDLTLVMGLVLKELLLGLVLGMPIAATIWGVEAAGTFIDNQRGAAMASLLNPASGNQVSPLGTLFAQLFVTWLFATGGFSALIEALYRSHEVWPLWSLQPAFGPAFPTGVLHLADVVMQLTLLLAGPAIVVMFLSELALALIGRFAPQLQVFFIAMSVKSAVALLVLVLSLMIVLTEADQRVPTQGAIFNLISTWLS
SIO_010081: HB778_RS39305
subclass of: SO_0000673
so part of: HB778_RS39305
location: 334672..335391
location: region:334672-335391:1
so has part: feature:334672-335391:1:exon

WP_244662202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334672-335391:1:exon

HB778_RS39310
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39310
old locus tag: HB778_39460
so part of: sequence
location: 335388..336167
location: region:335388-336167:1
so has part: feature:335388-336167:1:exon
subclass of: SO_0000010

position:335388:1
position: 335388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336167:1
position: 336167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335388-336167:1:exon

HB778_RS39310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39310
old locus tag: HB778_39460
inference: COORDINATES: protein motif:HMM:NF013479.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscU/YscU/HrcU family type III secretion system export apparatus switch protein
translation: MSGGKTEKPTPKRLRDLRRKGQVARSNEVVSAALTIAFFALFFASLSGMIDRLEAMILLPIPLLEGDLLRVTQKLLQSYIAELQHMLAPFIGIVLVIGAGANVLQNGPMFTPKAAAPALTKLSPSENVKRMVSLGNFIELAKSIGKILVLGSVLLLVLRDGVHALVWTPSCGISCLRVVTGNLLLGIAIYAALSFLTVAIGDFAFQRWQFTKKNMMSKEEVKREYKENNGAPLVFAKRKQLHMELLTKGITNRSRRGPS
SIO_010081: HB778_RS39310
subclass of: SO_0000673
so part of: HB778_RS39310
location: 335388..336167
location: region:335388-336167:1
so has part: feature:335388-336167:1:exon

WP_183455436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335388-336167:1:exon

HB778_RS39315
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctW
locus tag: HB778_RS39315
old locus tag: HB778_39465
so part of: sequence
location: 336868..337992
location: region:336868-337992:1
so has part: feature:336868-337992:1:exon
subclass of: SO_0000010

position:336868:1
position: 336868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337992:1
position: 337992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336868-337992:1:exon

HB778_RS39315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctW
locus tag: HB778_RS39315
old locus tag: HB778_39465
inference: COORDINATES: protein motif:HMM:TIGR02568.1
GO component: GO:0009986 - cell surface [Evidence IEA]
GO process: GO:0050709 - negative regulation of protein secretion [Evidence IEA]; GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system gatekeeper subunit SctW
translation: MSDWTVFETAPSRLCPDRMAIEPIPVQVGSWRGEAVRLAGPTHATLLEQAREERTFGFSEAIESKALTERKISEGRIAASLSAVHDIDAYFERLPYFDHTELPGLLRDIRSDDPALQDILRKVRQRFADPSYAYAALDLAARELRREGLDQLAVRTDGAKAQLMAKQGVAIRAGLNVSVAASEVAAGDQRLAAELRDLYRATVSGDPGPLRLYREILSKFGVEGFARHVAFLTRALGEDIASAGPSVEPARLWEILSGLSALRVLDTVHECCQKMVERIRRRPDTIDITATGVMRQLLPLVENTVPGPSKIIPIPERLGIPPVPLDLQIAVLRECRDLLAMIPVGVYRDLEARKTTLRAVEEAMDIRIEREESA
SIO_010081: HB778_RS39315
subclass of: SO_0000673
so part of: HB778_RS39315
location: 336868..337992
location: region:336868-337992:1
so has part: feature:336868-337992:1:exon

WP_183455437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336868-337992:1:exon

HB778_RS39320
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39320
old locus tag: HB778_39470
so part of: sequence
location: 337989..338351
location: region:337989-338351:1
so has part: feature:337989-338351:1:exon
subclass of: SO_0000010

position:337989:1
position: 337989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338351:1
position: 338351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337989-338351:1:exon

HB778_RS39320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39320
old locus tag: HB778_39470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAQASIQAFCSSMGLPPQPPPLTLRFERSGDLHMECRDGSVVMYLTRAMPLHRKGIAAAALKAVHPDRTLPHIVNVAFYGKALLVLLISMAENRADLPTLETAAQVLVRLVDEIDAAAR
SIO_010081: HB778_RS39320
subclass of: SO_0000673
so part of: HB778_RS39320
location: 337989..338351
location: region:337989-338351:1
so has part: feature:337989-338351:1:exon

WP_183455438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337989-338351:1:exon

HB778_RS39325
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39325
old locus tag: HB778_39475
so part of: sequence
location: 338726..339106
location: region:338726-339106:1
so has part: feature:338726-339106:1:exon
subclass of: SO_0000010

position:338726:1
position: 338726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339106:1
position: 339106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338726-339106:1:exon

HB778_RS39325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39325
old locus tag: HB778_39475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEPFISPDKRDALSVLAYLYIKFGFLHDASKLLLALDHVDSGWGWARHARCLALLRAGDCEEAAAEAGRLLVHALNDEERFRILQVRVKAYWKLGLKSEARACQRMVTVLLTQAAEPDASLGRIA
SIO_010081: HB778_RS39325
subclass of: SO_0000673
so part of: HB778_RS39325
location: 338726..339106
location: region:338726-339106:1
so has part: feature:338726-339106:1:exon

WP_183455440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338726-339106:1:exon

HB778_RS39330
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctV
locus tag: HB778_RS39330
old locus tag: HB778_39480
so part of: sequence
location: 339103..341196
location: region:339103-341196:1
so has part: feature:339103-341196:1:exon
subclass of: SO_0000010

position:339103:1
position: 339103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341196:1
position: 341196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339103-341196:1:exon

HB778_RS39330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctV
locus tag: HB778_RS39330
old locus tag: HB778_39480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006392826.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctV
translation: MNFLNKVLAVATGRNDIILAGLLVAIIFMMIIPLPAVLMDVLQAINLGVSALLLMVAVYIKSPLAFVSFPSVLLLTTLFRLSLGIAATRMILLHADAGQIIKAFGDFVVAGNLVVGAVTFLIITIVQFVVVTKGSERVAEVAARFSLDAMPGKQMSIDGDLRAGAINIQEARRRRIAIERESQLYAAMDGAMKFIKGDAIAGLISIVVNIIGGIAVGALQKGMSLYKALEIYTILTIGDGLVGQIPALFTSITAGFIVTRISDKDTGSDLGSEIGDEITAQPRALIAGSFILLLFSLVPGFPLAIFVILAVLAGGGGWLLQRRRSLSAPSSSYSVAGIRAPVSASDGPAVRSGEGGNAITLTVPLMLDISRDVQTIFRPDWLDKELAAVRQALLLDLGVPFPGINLRVSDSNKDGAYTIMVNEIPCGEGLLRAHHLLARDIPENLEIVGIPYLLDKPFLPQIETTWVEMAHRESLQAASIPFLEPVQILSYHIGHVLRRQADEFVGIQETKNLLNQVERSFPELVKEVLRTISLQTISEILKRLVSEEVSLRNMRTILTALVEWGQKEKDTVLLTEHVRCALKRQICFRHSVGRTLLPAYILSPEVEDTVRNAIRQTSAGSYLALDPRTTRQIVDKVRDAIGNVGQQPHKPVLLTSIDIRRFMRKIIEVDLYELPVLSYQELTPDISVQPLARISLS
SIO_010081: HB778_RS39330
subclass of: SO_0000673
so part of: HB778_RS39330
location: 339103..341196
location: region:339103-341196:1
so has part: feature:339103-341196:1:exon

WP_183455441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339103-341196:1:exon

HB778_RS39335
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctD
locus tag: HB778_RS39335
old locus tag: HB778_39485
so part of: sequence
location: 341205..342566
location: region:341205-342566:1
so has part: feature:341205-342566:1:exon
subclass of: SO_0000010

position:341205:1
position: 341205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342566:1
position: 342566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341205-342566:1:exon

HB778_RS39335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctD
locus tag: HB778_RS39335
old locus tag: HB778_39485
inference: COORDINATES: protein motif:HMM:TIGR02500.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system inner membrane ring subunit SctD
translation: MEEVTLAGDDAKLTLRVLAGPNRGAETPLEEGVWLIGASDTDDLTFADPELAATHLRITVEAGRIHVVALAPGVRVGTKDLPVGDWTGLNALTPVQVGRTIFGIGPAGSSFPQADAMGGLVPGTSAQLSAPPELASASMGRQMHVMVGVIPRQLRLGAVVCTLLIMPFVVFWAAIGRVPPSASEASPANDPLMMVRDIIRDLNIAHNVNITSVDDKLVIEGDLRPGDDAKLRAALSTAGLEAEVLSKRPTTLSDSQIIDLVTTVISSFGIEGSVRVIGPGEITITGYGPSDAKVQAALHRLQQDIPGLSEVENAIVTPDRARVFLETAITDQLRRSIHILTKADGVLVSGTLTPIAFEAWQKVASRFQEKFAPYIPLETQFTPVILPAPRGVYLGRTPFIVVENGTRLKVGDSLESLGQIVDIDRGGIFVRIGADEVHVSYPSKPRWIVEEKG
SIO_010081: HB778_RS39335
subclass of: SO_0000673
so part of: HB778_RS39335
location: 341205..342566
location: region:341205-342566:1
so has part: feature:341205-342566:1:exon

WP_183465872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341205-342566:1:exon

HB778_RS39340
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39340
old locus tag: HB778_39490
so part of: sequence
location: 342563..342817
location: region:342563-342817:1
so has part: feature:342563-342817:1:exon
subclass of: SO_0000010

position:342563:1
position: 342563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342817:1
position: 342817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342563-342817:1:exon

HB778_RS39340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39340
old locus tag: HB778_39490
inference: COORDINATES: protein motif:HMM:NF020557.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
translation: MSDVMAMFELQRQLLRDFDGAKRSALEREFDTCRQSLKREMDVGVSRQEFEVLAVMLDAIDAATEIINSIWSEYRDKELPLGWR
SIO_010081: HB778_RS39340
subclass of: SO_0000673
so part of: HB778_RS39340
location: 342563..342817
location: region:342563-342817:1
so has part: feature:342563-342817:1:exon

WP_183455443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342563-342817:1:exon

HB778_RS39345
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39345
old locus tag: HB778_39495
so part of: sequence
location: 342820..343062
location: region:342820-343062:1
so has part: feature:342820-343062:1:exon
subclass of: SO_0000010

position:342820:1
position: 342820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343062:1
position: 343062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342820-343062:1:exon

HB778_RS39345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39345
old locus tag: HB778_39495
inference: COORDINATES: protein motif:HMM:NF020948.2
GO process: GO:0015031 - protein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscF/YscF/HrpA family type III secretion system needle major subunit
translation: MSRISGPNLNANSITSNIGSATVSAERNFSSLMTSMDPDNASDLLKVQSTGQQWALSLALESSVIGMIYNALKGVVQKIG
SIO_010081: HB778_RS39345
subclass of: SO_0000673
so part of: HB778_RS39345
location: 342820..343062
location: region:342820-343062:1
so has part: feature:342820-343062:1:exon

WP_183465874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342820-343062:1:exon

HB778_RS39350
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39350
old locus tag: HB778_39500
so part of: sequence
location: 343169..343696
location: region:343169-343696:1
so has part: feature:343169-343696:1:exon
subclass of: SO_0000010

position:343169:1
position: 343169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343696:1
position: 343696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343169-343696:1:exon

HB778_RS39350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39350
old locus tag: HB778_39500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNPVSLKQNAYFPAPAYSGEAGESSSDEGILSSAFQPHLPSPSQISAIGSTQSVLKDLEAEEFINPANIAGQGTATQILALKQAVAARNLLQADEASSSRFARHSDDTPGGRSARAPVGQLRLLASALRGAGVARRRFSSVRDGEVSQEKALCVLRGVDGVDARDDRSVWQSGVV
SIO_010081: HB778_RS39350
subclass of: SO_0000673
so part of: HB778_RS39350
location: 343169..343696
location: region:343169-343696:1
so has part: feature:343169-343696:1:exon

WP_183465876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343169-343696:1:exon

HB778_RS39355
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39355
old locus tag: HB778_39505
so part of: sequence
location: 343719..344744
location: region:343719-344744:1
so has part: feature:343719-344744:1:exon
subclass of: SO_0000010

position:343719:1
position: 343719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344744:1
position: 344744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343719-344744:1:exon

HB778_RS39355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39355
old locus tag: HB778_39505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012335275.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MSEVRTIGLDLAKNVFQVHGADETGAVVFRKQLRRGRVLKFFGGLPRCLVAMEACGSSHFWAREIGHLGHEVRMIPPAYVKPFLKRQKNDMADAEAICEAAQRPTMRFVAVKSEERQAAAVVLRTRDLLIRQRTQTINALRGHLAEFGEVVPQGLSFASKLIAMIEDPQTALPETARTALRFLTASLSQLNDQIRVLDAQIVRRAREDETARRLMTVPGIGPLIATALVALAPSPETFKRGRDFAAWLGLVPRQHSTGGKQRLGSTTKMGDRSLRRLLIIGANSELVWRARKGATPGTWLAKMLAHKPPMLVRVALANKMARMIWAIMAKGGIYRAPVAAV
SIO_010081: HB778_RS39355
subclass of: SO_0000673
so part of: HB778_RS39355
location: 343719..344744
location: region:343719-344744:1
so has part: feature:343719-344744:1:exon

WP_183455345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343719-344744:1:exon

HB778_RS39360
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39360
old locus tag: HB778_39510
so part of: sequence
location: 345070..346059
location: region:345070-346059:1
so has part: feature:345070-346059:1:exon
subclass of: SO_0000010

position:345070:1
position: 345070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346059:1
position: 346059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345070-346059:1:exon

HB778_RS39360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39360
old locus tag: HB778_39510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015918131.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MPFKHNTRRRHHIEKMKFRVTNWPEYEAGLRHRGSLTLWVTPEALSRWQAPRRKTRGGQHRYSDLAIETTLTLGLVFGLRLRQAEGLLESVLQLMGLALAVPDHTTLSRRARTWQSPNKRHDRQVPPEGPVHVLVDSTGLQVYGAGQWLEEKHGARSRRSWRKLHLALDADSGEIIAHTLTDQATGDVSQVEPLLDQIGGPIGQFTADGAYDGKPTYDAVIDHSAAAAIVIPPRANAVEPFDDRPAGQRDQHIAAIGRDGRMKWQVSNGFGKRSLVETAIGRYKSTIGRRLRARSLPVQQTEVAIGCAVLNRMLACARPKSARRKAATA
SIO_010081: HB778_RS39360
subclass of: SO_0000673
so part of: HB778_RS39360
location: 345070..346059
location: region:345070-346059:1
so has part: feature:345070-346059:1:exon

WP_183465577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345070-346059:1:exon

HB778_RS39365
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39365
old locus tag: HB778_39515
so part of: sequence
location: complement(346087..346626)
location: region:346087-346626:-1
so has part: feature:346087-346626:-1:exon
subclass of: SO_0000010

position:346087:-1
position: 346087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346626:-1
position: 346626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346087-346626:-1:exon

HB778_RS39365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39365
old locus tag: HB778_39515
inference: COORDINATES: protein motif:HMM:NF014430.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MARNLHVHRPIARCLGASLTKQRLNQIDQHITALDAELATRIAADPQLARRHKIISSIAGLGPRTANQLVATMPELGSLDNKQAASLAGLAPVARQSGQWKGRSFIQGGRANVRRALYMPALVAARFNPDLREKYQHLIASGKPAKVAIVAVMRKLLVTANALVKADRMWVGVGAWVRT
SIO_010081: HB778_RS39365
subclass of: SO_0000673
so part of: HB778_RS39365
location: complement(346087..346626)
location: region:346087-346626:-1
so has part: feature:346087-346626:-1:exon

WP_244662129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346087-346626:-1:exon

HB778_RS39370
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39370
old locus tag: HB778_39520
so part of: sequence
location: 346625..347062
location: region:346625-347062:1
so has part: feature:346625-347062:1:exon
subclass of: SO_0000010

position:346625:1
position: 346625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347062:1
position: 347062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346625-347062:1:exon

HB778_RS39370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39370
old locus tag: HB778_39520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019863445.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTLEHASGDTVAELSGAAASEDLTTVPGRVRQRRLWSCTEKRALVDLASAAGSSVTEVAEAFGVAPSQLYAWRKQMAGGELDADQAMATFARIDVSDLPDVERPVADCPDPAGRIVVAFPNGARLRIDGTVDPTALRIVLAELTS
SIO_010081: HB778_RS39370
subclass of: SO_0000673
so part of: HB778_RS39370
location: 346625..347062
location: region:346625-347062:1
so has part: feature:346625-347062:1:exon

WP_183457837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346625-347062:1:exon

HB778_RS39375
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS39375
old locus tag: HB778_39525
so part of: sequence
location: 347059..347409
location: region:347059-347409:1
so has part: feature:347059-347409:1:exon
subclass of: SO_0000010

position:347059:1
position: 347059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347409:1
position: 347409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347059-347409:1:exon

HB778_RS39375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: tnpB
locus tag: HB778_RS39375
old locus tag: HB778_39525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017183759.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MITVVPTDRIYLCCGETDMRRGINSLARMVQQVLALDPHTGAIFCFRGRKGHIIKILAHDDQGFCLFTKRLSEGCFAWPTTKDQVTVSLTKAELSLLLEGIDWRRPSKTYRPRLAG
SIO_010081: HB778_RS39375
subclass of: SO_0000673
so part of: HB778_RS39375
location: 347059..347409
location: region:347059-347409:1
so has part: feature:347059-347409:1:exon

WP_183457839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347059-347409:1:exon

HB778_RS39380
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39380
old locus tag: HB778_39530
so part of: sequence
location: 347482..349065
location: region:347482-349065:1
so has part: feature:347482-349065:1:exon
subclass of: SO_0000010

position:347482:1
position: 347482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349065:1
position: 349065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347482-349065:1:exon

HB778_RS39380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39380
old locus tag: HB778_39530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019863443.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MSEQAPSTADFFARIALLEAAVSARDIAIAERDEQLRRERAEAALRIQRLQLRIDRFNRKAFGRSSEKLGQMRLELEDLETDFAASVPDIELPIVADTDKVRVLPVRKLNPNLPRKRAVREPSCACCPGCGGDLRAMGEDSEEMLDLVAQAWQVMETIRPKYSCRTCDKIIQAPAPAKAIARGKLSYAALAHIMMAKWGYHLPFYRLAQMMAAKGVDIERSTLSRSAGYAAALLDPIYNRIREIGRTRTKIHTDDTRLPILAPGNGKTHKGALWVYVADDRNSGSQEPPIAWYRATMGRAGESVMTELAGFAGTLQADGFSGYNQLYKGGAIREAACLAHLRRKIFDVHDSQPTELSTTAMAGIQAIYRIEEEIRGLPPAERLAARRSRTRPLVRALRRQLMRQGKGLSRHADIAKAFAYGTNRWRAFNRFLYDGQLEPDNLIAERAIRGFTVGRRNWLFSGSFAAAERSAVVLSIIETCKLCGVDAEAYMADVTERIQNDWPASRWDELMPWNWVRRQAMPLSLAA
SIO_010081: HB778_RS39380
subclass of: SO_0000673
so part of: HB778_RS39380
location: 347482..349065
location: region:347482-349065:1
so has part: feature:347482-349065:1:exon

WP_183457841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347482-349065:1:exon

HB778_RS39385
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39385
old locus tag: HB778_39535
so part of: sequence
location: 349062..349766
location: region:349062-349766:1
so has part: feature:349062-349766:1:exon
subclass of: SO_0000010

position:349062:1
position: 349062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349766:1
position: 349766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349062-349766:1:exon

HB778_RS39385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39385
old locus tag: HB778_39535
inference: COORDINATES: protein motif:HMM:TIGR02292.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UPF0149 family protein
translation: MSAIDDMALSDEALEAWMAIKPAPRPLVRTMSALDGFVTAAVTGPRFPDPQDWMCPLMGLPRDVLAKGSATDHAVFASVARIHNRINETLFDRPQDYAPRFATKPSGGIDPRPWCQGFYAAINLNIKKWKRLLDLDNPNHGLLLPILIYCVDKRGGPSSASPGQGQRPRASSSMRPTKTSPSSSPPCANSTTSPVMTIRSDRGDADQRLPIIYYRALFRERCLGASLTLLVLTL
SIO_010081: HB778_RS39385
subclass of: SO_0000673
so part of: HB778_RS39385
location: 349062..349766
location: region:349062-349766:1
so has part: feature:349062-349766:1:exon

WP_244662130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349062-349766:1:exon

HB778_RS42480
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42480
pseudo: true
so part of: sequence
location: complement(<349845..>350003)
location: region:349845-350003:-1
so has part: feature:349845-350003:-1:exon
subclass of: SO_0000010

position:349845:-1
position: 349845
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:350003:-1
position: 350003
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349845-350003:-1:exon

HB778_RS42480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005407612.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: HB778_RS42480
subclass of: SO_0000673
so part of: HB778_RS42480
location: complement(<349845..>350003)
location: region:349845-350003:-1
so has part: feature:349845-350003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349845-350003:-1:exon

HB778_RS39395
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39395
old locus tag: HB778_39545
pseudo: true
so part of: sequence
location: complement(350095..351782)
location: region:350095-351782:-1
so has part: feature:350095-351782:-1:exon
subclass of: SO_0000010

position:350095:-1
position: 350095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351782:-1
position: 351782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350095-351782:-1:exon

HB778_RS39395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39395
old locus tag: HB778_39545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838287.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1634 family transposase
SIO_010081: HB778_RS39395
subclass of: SO_0000673
so part of: HB778_RS39395
location: complement(350095..351782)
location: region:350095-351782:-1
so has part: feature:350095-351782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350095-351782:-1:exon

HB778_RS39400
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39400
old locus tag: HB778_39550
so part of: sequence
location: 352205..353611
location: region:352205-353611:1
so has part: feature:352205-353611:1:exon
subclass of: SO_0000010

position:352205:1
position: 352205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353611:1
position: 353611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352205-353611:1:exon

HB778_RS39400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39400
old locus tag: HB778_39550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015932577.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MEKATQPTSGKGKRRRRGAKRDGGRVSREVTVAVSAPAGSRFKGYETILVRDLALSAEVVRYRRERWVTPTGETMVAPLPAGIIGGWGANLRRFILACHIQGQVTTERLTALLTGIGVDISKRQVVRLISEGLEAFAAEDRDVLRAGLATAPWITVDDTSARHAHQDGYTTQIGDRRFTAFRTGRSKSREAFLATLRAGHSDYFINEEALAYMRGRNLAGPVIARLAAAPHKAFADSAAWQAHLAALGLDQLAVEPNPVRIATEGAMWGAIRHHGFLGDTVVVSDDAGQFRIGDHALCWVHAERLVHKLIPVTPDQRQAVDIMRQLIWWFYRDLKSYQRAPCPRHAAALRARFERLFKRRTGYVMLDRLLARLHRRKHELLRVLDRPEIPLHTNGSENDIRTFVTKRKISGGTVSEAGKNARDVLLGLMKTCIKLDVSFFRYLGDRLGIPTQESIPPLPDLVRQAAQA
SIO_010081: HB778_RS39400
subclass of: SO_0000673
so part of: HB778_RS39400
location: 352205..353611
location: region:352205-353611:1
so has part: feature:352205-353611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352205-353611:1:exon

HB778_RS39405
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39405
old locus tag: HB778_39555
so part of: sequence
location: complement(354820..355857)
location: region:354820-355857:-1
so has part: feature:354820-355857:-1:exon
subclass of: SO_0000010

position:354820:-1
position: 354820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355857:-1
position: 355857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354820-355857:-1:exon

HB778_RS39405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39405
old locus tag: HB778_39555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976683.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MKYFAGLDVSLEETAICVVDEAGRIVKETRAASEPQALIEALRKVDLPLERIGLEACSLTAWLHDGMCADGLPAICIETRQANAAMKMMPNKTDRNDARALAQIMRTGWYRQVHVKSRQCRLWRSLLVARRTVLNETRTIENVVRAILREAGIKLGTPSRTAFASRVRELAGTDPVVMPLVEPLLTILATMLGEFARLTKQVLGLVRQEEVCRRLMSVPGVGPITALAFRATIDQPDRFRRSRDVGAHLGLTPARYQSGETDIQGKVSRCGDELARTALYEAAHSLLVLSKKWSSLRAWGMNVAKRRGMARARVAVARKLAVILHRMWSDATEFRFGKAPGRVSA
SIO_010081: HB778_RS39405
subclass of: SO_0000673
so part of: HB778_RS39405
location: complement(354820..355857)
location: region:354820-355857:-1
so has part: feature:354820-355857:-1:exon

WP_183465578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354820-355857:-1:exon

HB778_RS39410
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39410
old locus tag: HB778_39560
so part of: sequence
location: complement(355903..357141)
location: region:355903-357141:-1
so has part: feature:355903-357141:-1:exon
subclass of: SO_0000010

position:355903:-1
position: 355903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357141:-1
position: 357141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355903-357141:-1:exon

HB778_RS39410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39410
old locus tag: HB778_39560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612055.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MTDDMMKLRTLVEKTPDADILREMIGFAAERLMELEVGAATGAGYGEKNPLRTAQRNGYRERDWETRAGTVELRIPKLRKGSYFPGFLEPRRMAEKALTAVIQEAYVQGISTRSVDDLVKAMGMSGISKSQVSRLCEEIDGKVKAFLERPIEGDWPYLWIDATYLKVRRGGRIVSVAVIIAVGVNADGRREVLGMEVGTSEAEPIWTEFLRKLTRRGLRGVKLVVSDAHEGIKAAVTKVLCATWQRCRVHFMRNVLAHAGKSGRRVVSAFIATAFAQETPEAASTQWRAVADQIRPKVPKLATIMDDAEPDVLAYMTFPREHRAKLHSTNPIERLNGEIKRRTEVVGIFPNDDAIVRLVGALLLEQNDEWAVQRARYMTLETISQMSDDPLIRWGDWGLARARLRAAAPVEM
SIO_010081: HB778_RS39410
subclass of: SO_0000673
so part of: HB778_RS39410
location: complement(355903..357141)
location: region:355903-357141:-1
so has part: feature:355903-357141:-1:exon

WP_183465579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355903-357141:-1:exon

HB778_RS42485
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42485
pseudo: true
so part of: sequence
location: complement(<357412..357533)
location: region:357412-357533:-1
so has part: feature:357412-357533:-1:exon
subclass of: SO_0000010

position:357412:-1
position: 357412
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:357533:-1
position: 357533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357412-357533:-1:exon

HB778_RS42485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011084489.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS42485
subclass of: SO_0000673
so part of: HB778_RS42485
location: complement(<357412..357533)
location: region:357412-357533:-1
so has part: feature:357412-357533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357412-357533:-1:exon

HB778_RS39415
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39415
old locus tag: HB778_39565
so part of: sequence
location: complement(357703..358233)
location: region:357703-358233:-1
so has part: feature:357703-358233:-1:exon
subclass of: SO_0000010

position:357703:-1
position: 357703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358233:-1
position: 358233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357703-358233:-1:exon

HB778_RS39415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39415
old locus tag: HB778_39565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633401.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSHENAVAAPYSVLFAVLAILPLAGCTSWNKPGLSVKETSPPELLGANNIDPAMRERIWRAVSQDSQVQALRDDLKQHPDNVDAAIRLTKALLAQERAHEALQVLDSVLVAVPGNLRALNAKGVVLDNEGRHDAAQALYRQALEAEPENQMLHHNLNLSLAFDGKSKRSALAPSR
SIO_010081: HB778_RS39415
subclass of: SO_0000673
so part of: HB778_RS39415
location: complement(357703..358233)
location: region:357703-358233:-1
so has part: feature:357703-358233:-1:exon

WP_183465580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357703-358233:-1:exon

HB778_RS39420
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctV
locus tag: HB778_RS39420
old locus tag: HB778_39570
so part of: sequence
location: complement(358249..360354)
location: region:358249-360354:-1
so has part: feature:358249-360354:-1:exon
subclass of: SO_0000010

position:358249:-1
position: 358249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360354:-1
position: 360354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358249-360354:-1:exon

HB778_RS39420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctV
locus tag: HB778_RS39420
old locus tag: HB778_39570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009488805.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctV
translation: MANVLRNFIERAPANPDLMVALMLLLAVAMMVMPIPIMVIDTLIGFNMGLAILLLLVALYVSTPLDFSSLPGVILISTVFRLALTIATTRLILAEGEAGSIIHTFGDFVISGNIVVGFVIFLVVTMVQFMVLAKGAERVAEVAARFTLDALPGKQMAVDAELRNGHIDANESRRRRATLERESQLYGAMDGAMKFVKGDAIAGLVVIFINMLGGISIGLLSKGMSFGEVLHHYTLLTIGDALISQIPALLLSITAATIVTRVTGAASSNLGTDIVKQLTASKRALRLAACVLVVMGFVPGFPLPVFLILAAVFAAASIVKGDVPGAGKVDAATAAPVEKETVPAEACPIAFFLAPSLTHAIDQVELQQHIARVSQLVSADLGIVVPRIPVAVDQQLPESQFRIDVEGVPVEQDLINPTQLTLTDDLASIESSGIPFRHDPEMDKIWVEQSHAPALNAAGIGHHRPSERLALRIHATLTRYAPRLVGIQETRHLLGRMEQEYADLVKEVLRTTPIPRIADVLRRLLDEGIPIRNTRLVLEALAEWSEREQNVALLTEYVRSGMKRQICHRYATHGIVPAFVIERETEDFMRSAVRDSAAGPYLVLEDRQSEALLSQMRQILSSAAPGQTLPVVLTSMDVRRFVRGFLSRHGIDLAVLSYQDLASDFTIQPAGSIKLRLEPILERHGNRAISALPPTDSQSAR
SIO_010081: HB778_RS39420
subclass of: SO_0000673
so part of: HB778_RS39420
location: complement(358249..360354)
location: region:358249-360354:-1
so has part: feature:358249-360354:-1:exon

WP_183465581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358249-360354:-1:exon

HB778_RS39425
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39425
old locus tag: HB778_39575
so part of: sequence
location: complement(360774..361664)
location: region:360774-361664:-1
so has part: feature:360774-361664:-1:exon
subclass of: SO_0000010

position:360774:-1
position: 360774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361664:-1
position: 361664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360774-361664:-1:exon

HB778_RS39425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39425
old locus tag: HB778_39575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008874799.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDAVSLHFEVLSGLYCGLTGKAALETGLIGSGLDADIIFVEQGLAPHHFRMTLLGNSIEVEALAAGLRMEDNRNIAAGECVVVPLPVVIHAGAMSILWSVQDAAPASGIGIPRLSISVLALVLLGSLGIGALSAIFSYYGNAGALSANSPGADLESKLSNNRADDQTNVAAAKDLQQEVDKAGLLNIKIGSAKGVVTAEGTVTSASVIRWQNVQQWFDHRTKGALTLVNGVVIKEEKAPSAIAVEAVWRGPLPYVVIAGEKYFVGAILDDGWMVDRIEDRRVLLSRNGRLAALPY
SIO_010081: HB778_RS39425
subclass of: SO_0000673
so part of: HB778_RS39425
location: complement(360774..361664)
location: region:360774-361664:-1
so has part: feature:360774-361664:-1:exon

WP_183465582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360774-361664:-1:exon

HB778_RS39430
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39430
old locus tag: HB778_39580
so part of: sequence
location: complement(362069..362350)
location: region:362069-362350:-1
so has part: feature:362069-362350:-1:exon
subclass of: SO_0000010

position:362069:-1
position: 362069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362350:-1
position: 362350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362069-362350:-1:exon

HB778_RS39430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39430
old locus tag: HB778_39580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875097.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NopC
translation: MVAAIGSGGGNIGVSLAQKGHGHSNGQPHQGSTGSSGQNRPVGGSEPADRPTISDQAAVQSEFESTLRAIALQIASDAMDEAEDAMAETEEDA
SIO_010081: HB778_RS39430
subclass of: SO_0000673
so part of: HB778_RS39430
location: complement(362069..362350)
location: region:362069-362350:-1
so has part: feature:362069-362350:-1:exon

WP_183465583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362069-362350:-1:exon

HB778_RS39435
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39435
old locus tag: HB778_39585
so part of: sequence
location: 364615..364977
location: region:364615-364977:1
so has part: feature:364615-364977:1:exon
subclass of: SO_0000010

position:364615:1
position: 364615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364977:1
position: 364977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364615-364977:1:exon

HB778_RS39435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39435
old locus tag: HB778_39585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGEEINAAKIRMLGLLNELDGCRNAALRGHDSWEEAQDQMDRFINAGSTVLNYYASLPPAVARSILSDDRAREFRDETLNRAKHCNMLATNILYALREKGRLRTRYSTSCAHPTLPATR
SIO_010081: HB778_RS39435
subclass of: SO_0000673
so part of: HB778_RS39435
location: 364615..364977
location: region:364615-364977:1
so has part: feature:364615-364977:1:exon

WP_183465584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364615-364977:1:exon

HB778_RS42490
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42490
old locus tag: HB778_39590
pseudo: true
so part of: sequence
location: <365649..366773
location: region:365649-366773:1
so has part: feature:365649-366773:1:exon
subclass of: SO_0000010

position:365649:1
position: 365649
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:366773:1
position: 366773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365649-366773:1:exon

HB778_RS42490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42490
old locus tag: HB778_39590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878168.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: HB778_RS42490
subclass of: SO_0000673
so part of: HB778_RS42490
location: <365649..366773
location: region:365649-366773:1
so has part: feature:365649-366773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365649-366773:1:exon

HB778_RS39445
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39445
old locus tag: HB778_39595
so part of: sequence
location: 367042..370566
location: region:367042-370566:1
so has part: feature:367042-370566:1:exon
subclass of: SO_0000010

position:367042:1
position: 367042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370566:1
position: 370566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367042-370566:1:exon

HB778_RS39445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39445
old locus tag: HB778_39595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872539.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: indolepyruvate ferredoxin oxidoreductase family protein
translation: MTRHDVALDDKFDLSKERIFLSGAQAVVRMLLMQRERDRRAGLNTAGFVSGYRGSPLGGLDLQLWKAKRQLADASIVFQPGLNEELAATACWGTQQTELLGEGKYDGVFSIWYGKGPGVDRSGDVFRHANLAGSSRYGGVLALMGDDHMAESSSNAHATEFVFVDTMIPILNPAGVQELIEYGLYGYAMSRFAGTWAAIKCVKDNIESTASVDASLDRLNIIIPEFDMPPSGLNIRHELDQLGQEARLHEHKRAAAAAFIKANDLNRIVYSGGRNPKIGIITIGKSYLDVRQALEDIGVDEARANQLGVRLFKIGCPWPLDFEHIADFVRGLEKVIVVEEKRSLIEVQLRESLYNTAMQPMVIGKKDERGGWLFPAKGSLDPNDIAIALGERIVETIGPSEEISARVARLKQFQAMLADKKDIGARTPFFCSGCPHNSSTKVPEGSIATAGIGCHFMALWMDRSTVGFTAMGGEGAQWVGQAPFSTREHIFQNLGDGTYNHSGSLALRFALASGANITYKILYNDAVAMTGGQPLEGNLTVDMIASQVHAEGVERIAIVTDEPRKYAAAGIGFPAGSTIHHRDDLDLVQRQLREVKGVSVLLYDQTCAAEKRRRRKRGTFPDPDKRVIINELVCEGCGDCGVQSNCASIQPVETEFGRKRRIDQSSCNKDFSCVNGFCPSFVTVHGAKIRKDEGIAGKSDPLEGVLEPQLFALNGDGWSSIIDGVGGTGVVTVGAILGMAAHLEGKGCGMIDMAGLAQKGGAVFSHVRIAKTPEDIHAIRVSAGKADLVLGCDLVVSGNKKVLAAVREGHTIFVANTAEIMPGDFARSADFSLPVEQLKEAIREAAGEKAHFFDATRTASALFGNSLGANMFMLGFAYQHGGLPLPAEAIERAIELNGESVAMNIAAFRWGRRAAHQPDFVKGMLGRPGQAAEPGIAQTLDEIVARRVEFLTAYQNAAYAKRYADRVAAVRKAEQAVLPGSAPVAEAVAKNLFKLMAIKDEYEVARLYTDGSFQRQLAAQFQEYDRLEFHLAPPIMGRRGADGKPKKSSFGPGMMKAFSLLASLKGLRGSALDLFGYSAERRTERGLLASYEADVDRIARILTPAKLEAAAALASVPALIRGYGHVKQASVEKAAGERARLLARLESAEAKPEPERRNKPLSVVSISLYNPTLT
SIO_010081: HB778_RS39445
subclass of: SO_0000673
so part of: HB778_RS39445
location: 367042..370566
location: region:367042-370566:1
so has part: feature:367042-370566:1:exon

WP_183465586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367042-370566:1:exon

HB778_RS39450
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39450
old locus tag: HB778_39600
pseudo: true
so part of: sequence
location: complement(<370626..>371014)
location: region:370626-371014:-1
so has part: feature:370626-371014:-1:exon
subclass of: SO_0000010

position:370626:-1
position: 370626
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:371014:-1
position: 371014
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370626-371014:-1:exon

HB778_RS39450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39450
old locus tag: HB778_39600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008604015.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS39450
subclass of: SO_0000673
so part of: HB778_RS39450
location: complement(<370626..>371014)
location: region:370626-371014:-1
so has part: feature:370626-371014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370626-371014:-1:exon

HB778_RS39455
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39455
old locus tag: HB778_39605
so part of: sequence
location: complement(371464..372501)
location: region:371464-372501:-1
so has part: feature:371464-372501:-1:exon
subclass of: SO_0000010

position:371464:-1
position: 371464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372501:-1
position: 372501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371464-372501:-1:exon

HB778_RS39455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39455
old locus tag: HB778_39605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913977.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscU/YscU/HrcU family type III secretion system export apparatus switch protein
translation: MSDTSEEKNHAATPTKLREARKNGQIPRSADFVRAAGTCAGFGYLWLRGSVIEDKCQEALLLVDKLQNLPFDIAVRQALVLLIELTLGAVGPLLGALVAAVILAGLIANGGFVFSLEPMKPKFEKIDPFQGLKRMVSARSAVELGKTLFKVVVLSTTFLILLFGMWKTVIYLPVCGMGCLGLVFTEAKLLMGIGAGALLVGGLIDLLLQRSLFLREMRMTKTEVTRELKEQQGTPELKSERRRIRDETAGEPPLGLNRATLIFRGKAILVGLRYIRGETGVPVLVCRAEGEAASHMFYEAQALHLTIVDDHVLAHQLISATKLGNAVPRQHFEPVARALFAAGLA
SIO_010081: HB778_RS39455
subclass of: SO_0000673
so part of: HB778_RS39455
location: complement(371464..372501)
location: region:371464-372501:-1
so has part: feature:371464-372501:-1:exon

WP_183465587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371464-372501:-1:exon

HB778_RS39460
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctT
locus tag: HB778_RS39460
old locus tag: HB778_39610
so part of: sequence
location: complement(372498..373316)
location: region:372498-373316:-1
so has part: feature:372498-373316:-1:exon
subclass of: SO_0000010

position:372498:-1
position: 372498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373316:-1
position: 373316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372498-373316:-1:exon

HB778_RS39460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctT
locus tag: HB778_RS39460
old locus tag: HB778_39610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857566.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctT
translation: MYASSGEIQILIHAALELVVVASLGAARAIGIMLVLPVFTRSQVGGLIRSCLAVAFGLPCLAQVSDGLHALDPETVLIHVTLLGLKEVFVGVLLGTLLGIPLWGLQAAGEFIDNQRGITSPSAPTDPATNSQASAMGVFLGITAITIFVASGGMEAVISALYGSYLIWPVFRFHPTLSPQGAMELLGLLDHIMRTTLLVSGPVVIFLLLVDVSMMILRRFAPQFKSSQLSPTLKNIGFPIIMVTYTAYLVEGMKLEIAQANGALEWFGKLLK
SIO_010081: HB778_RS39460
subclass of: SO_0000673
so part of: HB778_RS39460
location: complement(372498..373316)
location: region:372498-373316:-1
so has part: feature:372498-373316:-1:exon

WP_183465588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372498-373316:-1:exon

HB778_RS39465
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39465
old locus tag: HB778_39615
so part of: sequence
location: complement(373325..373573)
location: region:373325-373573:-1
so has part: feature:373325-373573:-1:exon
subclass of: SO_0000010

position:373325:-1
position: 373325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373573:-1
position: 373573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373325-373573:-1:exon

HB778_RS39465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39465
old locus tag: HB778_39615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838443.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscS/YscS/HrcS family type III secretion system export apparatus protein
translation: MSQSLMVFMIWILPPLIASVVVGLGIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVLSAPLIELADQIFTEFPAMTPSY
SIO_010081: HB778_RS39465
subclass of: SO_0000673
so part of: HB778_RS39465
location: complement(373325..373573)
location: region:373325-373573:-1
so has part: feature:373325-373573:-1:exon

WP_183465589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373325-373573:-1:exon

HB778_RS39470
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctR
locus tag: HB778_RS39470
old locus tag: HB778_39620
so part of: sequence
location: complement(373603..374268)
location: region:373603-374268:-1
so has part: feature:373603-374268:-1:exon
subclass of: SO_0000010

position:373603:-1
position: 373603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374268:-1
position: 374268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373603-374268:-1:exon

HB778_RS39470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctR
locus tag: HB778_RS39470
old locus tag: HB778_39620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006612532.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctR
translation: MTEIQPAVLTLLAVTAGLGLLVLAVATTTAFVKVSVVLFLVRNALGTQTIPPNVVLYAAALILTMFVSAPVIEQTYDRLTDPKLRYQTIDDWINAAHEGSEPLRDHLKKFTNEEQRRFFLSSTEKVWPEEMRAKATPDDFAILVPSFLISELKRAFEIGFLLYLPFIVIDLIVTTILMAMGMSMVSPTVISVPFKLFLFVAIDGWSRLMHGLVLSYTIPGG
SIO_010081: HB778_RS39470
subclass of: SO_0000673
so part of: HB778_RS39470
location: complement(373603..374268)
location: region:373603-374268:-1
so has part: feature:373603-374268:-1:exon

WP_183465590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373603-374268:-1:exon

HB778_RS39475
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctQ
locus tag: HB778_RS39475
old locus tag: HB778_39625
so part of: sequence
location: complement(374261..375292)
location: region:374261-375292:-1
so has part: feature:374261-375292:-1:exon
subclass of: SO_0000010

position:374261:-1
position: 374261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375292:-1
position: 375292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374261-375292:-1:exon

HB778_RS39475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctQ
locus tag: HB778_RS39475
old locus tag: HB778_39625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009488825.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system cytoplasmic ring protein SctQ
translation: MLEPALTLSHEVASWLNDIATSRTPFQSRIGDKSLSLRMGGVVWQQEPTAIPMLDCIWRVGGETVVLSLSRPLVEALVSTVQSGLAFPSEPTASLILELALEPLIARLEHRTQRSVHLLCVREAMTPAPYLELDIVFGPVSGKGRLCLFSPLDGLVPSAFRALGVLIGQVPRQPRGLSTELPVIVAGEIGTLRVPAALLRRACAGDALIPDIAPFGRGQITLSVGQLWTEADHEGDHLILRAPFRPRSCPLENAHMKQPESQLGPSEADLDEIEIVLVFECGRWPIPLGELRSAGEGHVFELGRPIDGPVDIVANGRRIGRGDIVRIGDELGIRLCGRLACND
SIO_010081: HB778_RS39475
subclass of: SO_0000673
so part of: HB778_RS39475
location: complement(374261..375292)
location: region:374261-375292:-1
so has part: feature:374261-375292:-1:exon

WP_244662131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374261-375292:-1:exon

HB778_RS39480
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39480
old locus tag: HB778_39630
so part of: sequence
location: complement(375364..375900)
location: region:375364-375900:-1
so has part: feature:375364-375900:-1:exon
subclass of: SO_0000010

position:375364:-1
position: 375364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375900:-1
position: 375900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375364-375900:-1:exon

HB778_RS39480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39480
old locus tag: HB778_39630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDVASDRVNRVQASRLRLLKEMQERGARRELSRKETERHMATLAVHNASQGLAIAQQHCASAEAALYQELMTLDSLSSAALDRHDLCIERLAAEIAFKRQMLDDARLAQEKAEIAASEKRELWVRCSAATHKWQQIDDDVRRAVDIQSDAAGEIEADDEMLLRYGRVSLAQMSRSQIR
SIO_010081: HB778_RS39480
subclass of: SO_0000673
so part of: HB778_RS39480
location: complement(375364..375900)
location: region:375364-375900:-1
so has part: feature:375364-375900:-1:exon

WP_183465591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375364-375900:-1:exon

HB778_RS39485
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctN
locus tag: HB778_RS39485
old locus tag: HB778_39635
so part of: sequence
location: complement(375876..377234)
location: region:375876-377234:-1
so has part: feature:375876-377234:-1:exon
subclass of: SO_0000010

position:375876:-1
position: 375876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377234:-1
position: 377234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375876-377234:-1:exon

HB778_RS39485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctN
locus tag: HB778_RS39485
old locus tag: HB778_39635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875105.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO function: GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system ATPase SctN
translation: MTTPVPEHNNFAGIRAPDPAISSLRSAAKQIDTRVVRGRITRAIGTLVHAVLPDTRIGELCLLQDPRTGLSLEAEVIGLLDDGVLLTPIGDLVGLSSRTEVVATGRMREVPVGPDLLGRVIDSRCRPLDGKGEVKTAETRPLRGRAPNPMTRRIVERPFPLGVRALDGLLTCGEGQRIGIYGEPGCGKSTLLSQIVKGAAADVVIVALIGERGREVREFIERHLGEAGLRRTVVVVETSDRSAVERAQCAPMATALAEYFREQGLRVALMMDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFGMLPGLLERAGMGERGSITAFYTVLVEGDGTGDPIAEESRGILDGHVVLSRAIAARSHFPAIDVLQSRSRVMDAVVSGTHRKAASFFRDLLSRYAENEFLINVGEYKQGGDPLTDRAVASIGELREFLCQTEGEASHFEETVAWMSRLTA
SIO_010081: HB778_RS39485
subclass of: SO_0000673
so part of: HB778_RS39485
location: complement(375876..377234)
location: region:375876-377234:-1
so has part: feature:375876-377234:-1:exon

WP_280515985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375876-377234:-1:exon

HB778_RS39490
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctL
locus tag: HB778_RS39490
old locus tag: HB778_39640
so part of: sequence
location: complement(377231..377854)
location: region:377231-377854:-1
so has part: feature:377231-377854:-1:exon
subclass of: SO_0000010

position:377231:-1
position: 377231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377854:-1
position: 377854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377231-377854:-1:exon

HB778_RS39490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctL
locus tag: HB778_RS39490
old locus tag: HB778_39640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016844754.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system stator protein SctL
translation: MTADVSAAPVAPQMRPVGPLIPASELEIWQCAAEARAAAERHQQRVRSWARAAYQRERARGQIEGLNAGAEELARLIAGTVSEVAQRKAVLEQELPQLVMEVLSDILGAFDPGELLVRAVRHAIERKYSGAEVCLHVCPMQVDMLAREFAGCDGREGRPRVRIDPDPTLSLQQCVLWSEYGNVDLGLDAQMRALRLGFGLLSEEGEP
SIO_010081: HB778_RS39490
subclass of: SO_0000673
so part of: HB778_RS39490
location: complement(377231..377854)
location: region:377231-377854:-1
so has part: feature:377231-377854:-1:exon

WP_183455251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377231-377854:-1:exon

HB778_RS39495
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39495
old locus tag: HB778_39645
so part of: sequence
location: complement(377851..378483)
location: region:377851-378483:-1
so has part: feature:377851-378483:-1:exon
subclass of: SO_0000010

position:377851:-1
position: 377851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378483:-1
position: 378483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377851-378483:-1:exon

HB778_RS39495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39495
old locus tag: HB778_39645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838449.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NolU
translation: MPISMQTSDRDHSSQLRSVYWSKLAASAHPTRIAACLDPTLSAATVVQLQTCARLQPKLAELLLDNDTDSNGCGWGPDLLKGHDPRRAALFAGSVWHARSLLKLVSQRHLTVLVEHIGADAHAFGIRHLAYAITGNLIADPKKLALQIEHDGHACLGAWLDQSPVLERNRVLLRLPLGTAAENPAPEHGNASGQLFSLVLAHFETEIPAL
SIO_010081: HB778_RS39495
subclass of: SO_0000673
so part of: HB778_RS39495
location: complement(377851..378483)
location: region:377851-378483:-1
so has part: feature:377851-378483:-1:exon

WP_280515986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377851-378483:-1:exon

HB778_RS39500
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: sctJ
locus tag: HB778_RS39500
old locus tag: HB778_39650
so part of: sequence
location: complement(378496..379362)
location: region:378496-379362:-1
so has part: feature:378496-379362:-1:exon
subclass of: SO_0000010

position:378496:-1
position: 378496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379362:-1
position: 379362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378496-379362:-1:exon

HB778_RS39500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: sctJ
locus tag: HB778_RS39500
old locus tag: HB778_39650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018458371.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion inner membrane ring lipoprotein SctJ
translation: MIGLAHGEIMRSRPSGRRSLHFVVLPLFFALSGCKVDLYTQLQEREANEMLALLIDNGVDAVRVAAKDGTSTIQVDEKLIAFSINLLNAKGLPRQSFKNIGEIFEGSGLIASPTEERARYVYALSEELSRTISDIDGVFSVRVHVVLPNNDLLRAGGTPSSASVFIRHDAKANLSVLLPKIKMLVADSIEGLSYEKVEVVLVPVERSVHEQPSVPATALAQASKSFPAPLLAIVMGVAAAVFAVACYLLASVLRHRRRQSSGELSKIGGPSGVSAVEAIRKKIIGRAA
SIO_010081: HB778_RS39500
subclass of: SO_0000673
so part of: HB778_RS39500
location: complement(378496..379362)
location: region:378496-379362:-1
so has part: feature:378496-379362:-1:exon

WP_183465593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378496-379362:-1:exon

HB778_RS39505
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39505
old locus tag: HB778_39655
so part of: sequence
location: complement(379359..379745)
location: region:379359-379745:-1
so has part: feature:379359-379745:-1:exon
subclass of: SO_0000010

position:379359:-1
position: 379359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379745:-1
position: 379745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379359-379745:-1:exon

HB778_RS39505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39505
old locus tag: HB778_39655
inference: COORDINATES: protein motif:HMM:NF036329.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NolB
translation: MKNDTAAAAPVPPPLDVQRATAQTSPLGHRVLQAISSMHGDNAVTSAAPDHQVALPKGAPPGAAERLPVEGGATGTSDVPRAGGDFEAMVAGLRDLYNGVTQVALVSKGVSGITSSVNKLIKKDERRE
SIO_010081: HB778_RS39505
subclass of: SO_0000673
so part of: HB778_RS39505
location: complement(379359..379745)
location: region:379359-379745:-1
so has part: feature:379359-379745:-1:exon

WP_280515987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379359-379745:-1:exon

HB778_RS39510
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39510
old locus tag: HB778_39660
so part of: sequence
location: 380051..380755
location: region:380051-380755:1
so has part: feature:380051-380755:1:exon
subclass of: SO_0000010

position:380051:1
position: 380051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380755:1
position: 380755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380051-380755:1:exon

HB778_RS39510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39510
old locus tag: HB778_39660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008874775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NolW
translation: MPRTLIRSTILHSLKRLLCVGFFLSASIQTTVGAPLSLPSTPYRYTVLDQDLTAALQEFGNNLNIRVNISAEVKGRIRGRMPDLPPREFLDRLTNLYHLQWYYDGLVLYVSDAKEAQTRMLVLTSVRFDAFNGALDRLGISDDRYVVRPTPGNGLVLVSGPPRFIALVEQTFNGLVAEAQAQPHVAETPPRESVLILFRGSSTTVVRNGQPEASYSSDVPQPDSVAGKPELSQK
SIO_010081: HB778_RS39510
subclass of: SO_0000673
so part of: HB778_RS39510
location: 380051..380755
location: region:380051-380755:1
so has part: feature:380051-380755:1:exon

WP_183465594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380051-380755:1:exon

HB778_RS39515
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39515
old locus tag: HB778_39665
so part of: sequence
location: 381043..382881
location: region:381043-382881:1
so has part: feature:381043-382881:1:exon
subclass of: SO_0000010

position:381043:1
position: 381043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382881:1
position: 382881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381043-382881:1:exon

HB778_RS39515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39515
old locus tag: HB778_39665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913965.1
GO process: GO:0009877 - nodulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HrpF/NolX family T3SS translocon protein
translation: MSASNLSSSITSNLPQPVQAWSGLKPSAAVLQTQQSASSFEAMLSTYLVGDMTNPGALRGPLAPDVESTLEDLRQHPLDLLPSHMKAAIESMDQAPQPPAIASDFISPAPVPSSRITWNGGSLTKAELQIVAVLNRHKDQCPLSWESLGDKANDPSTPPDLKAAIEGLQQDPELFYAIGSQGDGRCGGKITAKDLSGFSRHHSQVAEFQDRQAQSYQQNYIPSDSAGNAQPSVMTLSDALRELYRYSDDLPKDLSLADFKRIVDGQAKTGKCPPQVIAAAQHFLNHPDAWKQLCGGSDTVHKDEFLKAATSSMSLTQTELNTLKMINSNQRAFFGSGDLTRDKLASMADDKSLDPKVRQTASQLLSDPLLFGLLNNSITGYKTHNEFFDFGGGHTVDSGNISKKDFAQFYGNMSVANSTVQKTKTHVPEAAAEQEAVADMMMGAADQPDIKSSKQNGGAFIHTVGDVLKVYSTVVDWTATAVGLLSFIPAVGQVADLASMALACEAQALNVVRTAITGGNMKQALLEAGLGVAAQAVSLVAGPQVKLAIRNGLIRKAMEEAATAGINLPLSTAQTYAEEYLNNLQARLNAEPIPAAGIPSPIGTPQLSQNVA
SIO_010081: HB778_RS39515
subclass of: SO_0000673
so part of: HB778_RS39515
location: 381043..382881
location: region:381043-382881:1
so has part: feature:381043-382881:1:exon

WP_183465595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381043-382881:1:exon

HB778_RS39520
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39520
old locus tag: HB778_39670
so part of: sequence
location: complement(383729..384292)
location: region:383729-384292:-1
so has part: feature:383729-384292:-1:exon
subclass of: SO_0000010

position:383729:-1
position: 383729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384292:-1
position: 384292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383729-384292:-1:exon

HB778_RS39520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39520
old locus tag: HB778_39670
inference: COORDINATES: protein motif:HMM:TIGR02522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpaD family pilus assembly lipoprotein
translation: MTLRIISLVVTLTVSVSGCTSTAPIVEPLAPILIGQETTVLTLHSLRASERRRLRVFLETASHGRRDALHLLISGASGLSAEAVHEARQMGIGAYNIHLLDQTNGGAVRLEAIVYRARPPVCPSYSGPLLNDKSFDQTLGCSIRHNLAAMVSDPRDLLDNRAVKSSDGDRAAVPVARYRTFAKDKDG
SIO_010081: HB778_RS39520
subclass of: SO_0000673
so part of: HB778_RS39520
location: complement(383729..384292)
location: region:383729-384292:-1
so has part: feature:383729-384292:-1:exon

WP_183465596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383729-384292:-1:exon

HB778_RS39525
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39525
old locus tag: HB778_39675
so part of: sequence
location: complement(384303..385715)
location: region:384303-385715:-1
so has part: feature:384303-385715:-1:exon
subclass of: SO_0000010

position:384303:-1
position: 384303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385715:-1
position: 385715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384303-385715:-1:exon

HB778_RS39525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39525
old locus tag: HB778_39675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II and III secretion system protein family protein
translation: MVGQRPIFSRYLSHVLCALTLFSPLPAAAQNKQVQAAPRAASNSINATLNLSSSLGKTVHLPAAAATIFVADPAIADYQAPSSKTIFVFGKKSGQTSLFALDENGEALAEFRIVVTQPIGELRAMLRDQVGDYPIRVSYTPRGAILSGTAPDAETVDTAKRVTEQFLGDGAQVVNNIKVAGSLQVNLSVRVAEVSRSAMKALGINLSAFGQVGNFKVGLLSGKGAGAGAANGGGTAEIGFDNGVVNVGAVLDALAEEHIASVLAEPNLTAMSGETASFLAGGEFPIPVLQEKGQVSVEFRHFGVSLEFVPTVLNNDQINIRVKPEVSELSSQGAVQINGISVPAISTRRADTVVELASGQSFAIGGLIRRSVNTDISVFPWLGELPVLGALFRSSSFQKQETELVILVTPYIVRPGSNPNQMSAPTDRMGSPLDQGATLTNSLASPPGDQRPSPRTGASGAKGGLGFIIE
SIO_010081: HB778_RS39525
subclass of: SO_0000673
so part of: HB778_RS39525
location: complement(384303..385715)
location: region:384303-385715:-1
so has part: feature:384303-385715:-1:exon

WP_244662203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384303-385715:-1:exon

HB778_RS39530
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39530
old locus tag: HB778_39680
so part of: sequence
location: complement(385794..386483)
location: region:385794-386483:-1
so has part: feature:385794-386483:-1:exon
subclass of: SO_0000010

position:385794:-1
position: 385794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386483:-1
position: 386483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385794-386483:-1:exon

HB778_RS39530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39530
old locus tag: HB778_39680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018319550.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MRTLLVDHHADLTRAVRVALGDSGFAVDVVGTLEQASSAFCCASYEILLLELVLPDGDGLDWLRQLRSDGHSVPAVVMSNIDHLEQRIAVFNGGADDFLVKPVFTDELIARMRAVLRRSTQMTDPIIVFGNLHFDPIGRQVSVAGHPLMAARRELCILEHLLNRAGRIVPRAHLEDHIYSFNDEVSANALEVGIYRLRGHLNRSGATPRIKTVRGIGYILECPTSATSA
SIO_010081: HB778_RS39530
subclass of: SO_0000673
so part of: HB778_RS39530
location: complement(385794..386483)
location: region:385794-386483:-1
so has part: feature:385794-386483:-1:exon

WP_183465597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385794-386483:-1:exon

HB778_RS39535
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39535
old locus tag: HB778_39685
pseudo: true
so part of: sequence
location: 387117..>387428
location: region:387117-387428:1
so has part: feature:387117-387428:1:exon
subclass of: SO_0000010

position:387117:1
position: 387117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387428:1
position: 387428
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387117-387428:1:exon

HB778_RS39535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39535
old locus tag: HB778_39685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018648293.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: coproporphyrinogen III oxidase
SIO_010081: HB778_RS39535
subclass of: SO_0000673
so part of: HB778_RS39535
location: 387117..>387428
location: region:387117-387428:1
so has part: feature:387117-387428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387117-387428:1:exon

HB778_RS39540
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39540
old locus tag: HB778_39690
pseudo: true
so part of: sequence
location: complement(387880..389066)
location: region:387880-389066:-1
so has part: feature:387880-389066:-1:exon
subclass of: SO_0000010

position:387880:-1
position: 387880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389066:-1
position: 389066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387880-389066:-1:exon

HB778_RS39540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39540
old locus tag: HB778_39690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008874751.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: porin
SIO_010081: HB778_RS39540
subclass of: SO_0000673
so part of: HB778_RS39540
location: complement(387880..389066)
location: region:387880-389066:-1
so has part: feature:387880-389066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387880-389066:-1:exon

HB778_RS42495
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42495
pseudo: true
so part of: sequence
location: complement(<389700..>389862)
location: region:389700-389862:-1
so has part: feature:389700-389862:-1:exon
subclass of: SO_0000010

position:389700:-1
position: 389700
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:389862:-1
position: 389862
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389700-389862:-1:exon

HB778_RS42495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611992.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS42495
subclass of: SO_0000673
so part of: HB778_RS42495
location: complement(<389700..>389862)
location: region:389700-389862:-1
so has part: feature:389700-389862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389700-389862:-1:exon

HB778_RS39545
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39545
old locus tag: HB778_39695
so part of: sequence
location: 390289..391234
location: region:390289-391234:1
so has part: feature:390289-391234:1:exon
subclass of: SO_0000010

position:390289:1
position: 390289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391234:1
position: 391234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390289-391234:1:exon

HB778_RS39545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39545
old locus tag: HB778_39695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611376.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MTRSLSADLRGRVILAISEGVSTREAARRFRIGIATAGNWYRRYRETGEMAARKQGQPSRSKLDPHEAFILGLIEETPDITLAEIAERLAAGHGVRVVPSTIWMFLDRRCVTFKKKTAHASEQQRPDVKARRCAWFDGQLDLDPEKLIFIDETAASTKMARLRGRAKCGERCRAPVPHGHWKTTTFTAGLRLNGLTAPMLLDGPMNGAAFLAYAEQVLAPELSPGDIVVMDNLPAHKITGVREAIQRTGARLLLLPPYSPDFNPIEMAFSKLKALLRKAAARSIDQLWSVIADCLDAFKPAECRNYFEAAGYDPE
SIO_010081: HB778_RS39545
subclass of: SO_0000673
so part of: HB778_RS39545
location: join(390289..390629,390628..391234)
location: region:390289-391234:1
so has part: feature:390289-390629:1:exon
so has part: feature:390628-391234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:390289-390629:1:exon

position:390629:1
position: 390629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390628-391234:1:exon

position:390628:1
position: 390628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HB778_RS39550
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: hemN
locus tag: HB778_RS39550
old locus tag: HB778_39700
so part of: sequence
location: 391418..392746
location: region:391418-392746:1
so has part: feature:391418-392746:1:exon
subclass of: SO_0000010

position:391418:1
position: 391418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392746:1
position: 392746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391418-392746:1:exon

HB778_RS39550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: hemN
locus tag: HB778_RS39550
old locus tag: HB778_39700
EC number: 1.3.98.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019856540.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygen-independent coproporphyrinogen III oxidase
translation: MQTSFLAKYREARLPWYTIYPTVPEFSAAVGAEAYAEWLRDLPADDSVSLYLHVPFCRSTCWYCGFPTTITRQDAPILKYLAVVRDEIRLVSEQPPQPLPVSDVHFGGGTPTLIGPAEFLAIMECLRRRFAFRKTTAVAVEIDPRTFTAEMAEALAAAGVNRASLGVQSFDPIVQKAINRVQSEAQTAAAVEMLRRHGVSRINFDLIFGLPHQTVRSCVETATAAVAIRPNRLAVFGYAHIPSAIKNQRLIEETALPDSAARAEQAAAVAETLVAAGYREIGLDHFALPDDELALAQETGRLRRNSLGYSADTCKTLIGFGASAIGRVGEGYVQNEVTRDCYSRHIAAGRLATSQGYRLTDEDRVRAAIIERLMCDLEADVPAICAAHEFDPIRFPDSAERLAMLVKDGIVDIEDGIIRVRQEHRFVIRAVAAAFDAFLANR
SIO_010081: HB778_RS39550
subclass of: SO_0000673
so part of: HB778_RS39550
location: 391418..392746
location: region:391418-392746:1
so has part: feature:391418-392746:1:exon

WP_183465599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391418-392746:1:exon

HB778_RS42500
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42500
so part of: sequence
location: complement(393029..393442)
location: region:393029-393442:-1
so has part: feature:393029-393442:-1:exon
subclass of: SO_0000010

position:393029:-1
position: 393029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393442:-1
position: 393442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393029-393442:-1:exon

HB778_RS42500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42500
inference: COORDINATES: protein motif:HMM:NF017760.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MSVRYNIVRSVGTAFGGVILAFFGPLAAFALAAVSDLAPLAVDRHSDLGNRRLVMALLPGRCLLVGTNQCAVEHHLVILRIPIRSANIRSHTGLTAPEVCRLSRRWHCSLLSSYRRAIPRSRSNLNADLNRECRLAR
SIO_010081: HB778_RS42500
subclass of: SO_0000673
so part of: HB778_RS42500
location: complement(393029..393442)
location: region:393029-393442:-1
so has part: feature:393029-393442:-1:exon

WP_244662204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393029-393442:-1:exon

HB778_RS39555
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39555
old locus tag: HB778_39705
so part of: sequence
location: complement(393336..393599)
location: region:393336-393599:-1
so has part: feature:393336-393599:-1:exon
subclass of: SO_0000010

position:393336:-1
position: 393336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393599:-1
position: 393599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393336-393599:-1:exon

HB778_RS39555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39555
old locus tag: HB778_39705
inference: COORDINATES: protein motif:HMM:NF017760.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MWTATQISSLGWLVQTVAISWARVERKNTGNVDAACTSATIKSDAEMVAITAYVCPIQYCAQRWYGFWRRNPGILWTAGRFRFGCGE
SIO_010081: HB778_RS39555
subclass of: SO_0000673
so part of: HB778_RS39555
location: complement(393336..393599)
location: region:393336-393599:-1
so has part: feature:393336-393599:-1:exon

WP_244662205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393336-393599:-1:exon

HB778_RS42505
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42505
so part of: sequence
location: 393490..393786
location: region:393490-393786:1
so has part: feature:393490-393786:1:exon
subclass of: SO_0000010

position:393490:1
position: 393490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393786:1
position: 393786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393490-393786:1:exon

HB778_RS42505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42505
inference: COORDINATES: protein motif:HMM:NF017760.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQAASTLPVFFLSTLAQLMATVCTSHPRLDICVAVQIGRNTWFRNGASVVENGHMGGFFALHDVAGFGHLHAGSHRQAVLAQSGSLAARRARKRWSAR
SIO_010081: HB778_RS42505
subclass of: SO_0000673
so part of: HB778_RS42505
location: 393490..393786
location: region:393490-393786:1
so has part: feature:393490-393786:1:exon

WP_244662206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393490-393786:1:exon

HB778_RS39560
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39560
old locus tag: HB778_39710
so part of: sequence
location: complement(393896..394879)
location: region:393896-394879:-1
so has part: feature:393896-394879:-1:exon
subclass of: SO_0000010

position:393896:-1
position: 393896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394879:-1
position: 394879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393896-394879:-1:exon

HB778_RS39560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39560
old locus tag: HB778_39710
EC number: 2.3.1.179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006205531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase III
translation: MSRSSRILGFGHHAPARRVENPEIENSLGLEPGWIERRTGIRSRFWATDEDTLSGLAAYAGDMALANAGIKRSDIGLLLLATSTPDHLLPPSAPLVAHGLGLGRAGAVDLAGACAGFIYALMFADGFTRLHGKSALVIAANILSRRINPAERASAVLFADAAGALVIGPCEDPDHGILGASVDSDGSRYGLIQIPAGGSNKPFHGDLDLEQTRMTITDGREVFAKAVEMMTACSQDALTAARMRPQDIDRFVPHQANARIFDAVGRNLGIADHAIIKTIVDYGNSSAATIPLSLSLANQAEPFRQGEKILLAAAGAGLSGGALIVGT
SIO_010081: HB778_RS39560
subclass of: SO_0000673
so part of: HB778_RS39560
location: complement(393896..394879)
location: region:393896-394879:-1
so has part: feature:393896-394879:-1:exon

WP_183465600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393896-394879:-1:exon

HB778_RS39565
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39565
old locus tag: HB778_39715
so part of: sequence
location: complement(394876..396141)
location: region:394876-396141:-1
so has part: feature:394876-396141:-1:exon
subclass of: SO_0000010

position:394876:-1
position: 394876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396141:-1
position: 396141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394876-396141:-1:exon

HB778_RS39565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39565
old locus tag: HB778_39715
EC number: 2.6.1.62
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006339725.1
GO function: GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylmethionine--8-amino-7-oxononanoate transaminase
translation: MSQSHVWHPFTQHALEPAIPEIVMTEGAYLHKADGTRILDAISSWWVVTHGHRHPRIMKAIETTASALDQIIFAGFTHEPAERLAKALVGLAPAGLDWVFYSDSGSTSVEVALKMALGYFRNIGAPRSRIVVMAHSYHGDTIGTMSVGARGVFNAAYEPLLFEVDTIPFLAAGREQETLDRFEAVCRDLRAAALIVEPLVLGAGGMLMYPASVLTELKKIAEASGTLLIADEVMTGWGRTGTMFACEQASISPDILCTSKGLTGGVIPLAATLATDAIFRAHYSTDRKKTFFHSSSYTANPIACAAALANIEIWRDEPVAERIAALSAMQTAGLRRFRDNPFFTDCRATGTIAALDLRTGSAGYLAEIGPKLRAFFLDKGLLVRPLGNVLYLLPPYCITGDELERLYDAIEEAGERFGSRP
SIO_010081: HB778_RS39565
subclass of: SO_0000673
so part of: HB778_RS39565
location: complement(394876..396141)
location: region:394876-396141:-1
so has part: feature:394876-396141:-1:exon

WP_183465601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394876-396141:-1:exon

HB778_RS39570
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: bioD
locus tag: HB778_RS39570
old locus tag: HB778_39720
so part of: sequence
location: complement(396141..396776)
location: region:396141-396776:-1
so has part: feature:396141-396776:-1:exon
subclass of: SO_0000010

position:396776:-1
position: 396776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396141-396776:-1:exon

HB778_RS39570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: bioD
locus tag: HB778_RS39570
old locus tag: HB778_39720
EC number: 6.3.3.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913545.1
GO function: GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dethiobiotin synthase
translation: MTQRIVITGTDTGIGKTVFAAGLAGLLDGFYWKPVQSGLDGETDSEVVARLAGLPSERVLPEAYRLKSPLSPHRSAEIDGVAIKAADLTFPVLPTPLVIEGAGGLMVPLNRRTRFIDIFAEWRLPVILCARTTLGTINHTLLSIEALRARSIPLAGIAFIGDEMADTQRTIVEMGGVPQLGRLPYLDPLTDKTLRDAMIAGFAFASIAGGD
SIO_010081: HB778_RS39570
subclass of: SO_0000673
so part of: HB778_RS39570
location: complement(396141..396776)
location: region:396141-396776:-1
so has part: feature:396141-396776:-1:exon

WP_183465602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396141-396776:-1:exon

HB778_RS39575
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39575
old locus tag: HB778_39725
so part of: sequence
location: complement(396788..397927)
location: region:396788-397927:-1
so has part: feature:396788-397927:-1:exon
subclass of: SO_0000010

position:396788:-1
position: 396788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397927:-1
position: 397927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396788-397927:-1:exon

HB778_RS39575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39575
old locus tag: HB778_39725
EC number: 2.3.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006333932.1
GO function: GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 8-amino-7-oxononanoate synthase
translation: MNGAPLARYDATLQGLARKDRLRTLLPRAGLDFSSNDYLGLAASRRLGEAVAAAIAQGTPVGATGSRLLRGNAPEHEQLEADAAAFFGTERALFFGSGYIANFALLTALPQKGDLLVLDELAHASMHEGARAGRALLKLVAHNDVDAAEDAITRWRAEGGMGRVWIAIESLYSMDGDRAPLKSLVALADRHEAFLVVDEAHATGVWGPDGRGLAAALKGRDNIVALHTCGKALGASGALVTGPRTLCDYLINRCRPFIYATAPSPLMAVAVREALAMLSDEPMRRVQLQDRVAFAGRQLAERCGVKPSGSQIQPFAIGDVGRTMVVAAELQARGFDIRGIRPPTVPEGTSRLRISLTLNVDEAEISAMVEALVEVLAQT
SIO_010081: HB778_RS39575
subclass of: SO_0000673
so part of: HB778_RS39575
location: complement(396788..397927)
location: region:396788-397927:-1
so has part: feature:396788-397927:-1:exon

WP_183465603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396788-397927:-1:exon

HB778_RS39580
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: bioB
locus tag: HB778_RS39580
old locus tag: HB778_39730
so part of: sequence
location: complement(397924..398922)
location: region:397924-398922:-1
so has part: feature:397924-398922:-1:exon
subclass of: SO_0000010

position:397924:-1
position: 397924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398922:-1
position: 398922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397924-398922:-1:exon

HB778_RS39580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: bioB
locus tag: HB778_RS39580
old locus tag: HB778_39730
EC number: 2.8.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018430770.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin synthase BioB
translation: MNAETDVNQVVDTIDVALPRWSSKEAEAIHAMPFNDLLFLAQTVHRQNFDRNRVQLSRLLSIKTGGCPEDCGYCSQSAHHETGLMATKLMEVERVITEATKARDAGATRYCMGAAWRHPKERDMNALIAMVEGIKALGMETCMTLGMLELGQAQRLKAAGLDYYNHNIDTSERYYPEVVSTHTFADRLQTLGHVREAGIKVCCGGIFGMGEEKADRIDMLVTLANLPEPPESVPINLLIPIKGTPLAEAGPLDPLAFVRTIALARVMMPKSFIRLSAGRTAMSDEMQALCFFAGANSIFVGDTLLTAENPGEDKDTLLFRRLGIEPMALEAQ
SIO_010081: HB778_RS39580
subclass of: SO_0000673
so part of: HB778_RS39580
location: complement(397924..398922)
location: region:397924-398922:-1
so has part: feature:397924-398922:-1:exon

WP_183465604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397924-398922:-1:exon

HB778_RS39585
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nadC
locus tag: HB778_RS39585
old locus tag: HB778_39735
so part of: sequence
location: complement(399125..400006)
location: region:399125-400006:-1
so has part: feature:399125-400006:-1:exon
subclass of: SO_0000010

position:399125:-1
position: 399125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400006:-1
position: 400006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399125-400006:-1:exon

HB778_RS39585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nadC
locus tag: HB778_RS39585
old locus tag: HB778_39735
EC number: 2.4.2.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533323.1
GO function: GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO process: GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxylating nicotinate-nucleotide diphosphorylase
translation: MVSFSPLPSTLIEPIVRGALLEDLGRCGDLTSDAVIPHDCIATLVLKSRQAGIVAGLDLVAYAFLLVEPAIDMHIWRPDGSDVGAGETIAKLCGPARGLLAAERTALNFLCRLSGIATATAAMVESVRGHKARIVCTRKTTPGLRALEKYAVRVGGGANHRFGLDDGVLIKDNHIAIAGDIRTAIERARAAAGHMVKIEVEVDTLEQLDIALTVGVDAVLLDNMSVEDLARAVATVGGRTITEASGRVTPKTAPAIAATGVDLISMGWLTHSAPILDIGLDMPALGNIGTRLN
SIO_010081: HB778_RS39585
subclass of: SO_0000673
so part of: HB778_RS39585
location: complement(399125..400006)
location: region:399125-400006:-1
so has part: feature:399125-400006:-1:exon

WP_183465605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399125-400006:-1:exon

HB778_RS39590
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39590
old locus tag: HB778_39740
so part of: sequence
location: complement(400008..401549)
location: region:400008-401549:-1
so has part: feature:400008-401549:-1:exon
subclass of: SO_0000010

position:400008:-1
position: 400008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401549:-1
position: 401549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400008-401549:-1:exon

HB778_RS39590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39590
old locus tag: HB778_39740
EC number: 1.4.3.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533322.1
GO function: GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-aspartate oxidase
translation: MNLDVLDIAGAPVVIGAGIAGLMTALHLAPEPVVLLSNAPLGTGVCSELAQGGLAASLGGDDDPELHLCDTIAAGDGLCDEATVRRVVRAATNAIKTLDRFGVAFDRYPEGALRLGLEAAHSQRRIVHAGGDATGRELVRALIAAARRTASITILENVEVRRLIVEDGSVIAVVAVGYAGAVALPTRRAVLATGGIGGLFFDTTNPPGSWGHGLALAAWAGAELADLEFVQFHPTALDTPRRPMPLVSEAVRGEGAMLIDERGERFLAETPGGELAPRDVVARAVWHQLAAGGRVFLDARRCLGPSFEKRFPGIAGLCREAGVDPATDPIPVRPAAHYHMGGVAVDAAGRSSVEGLWACGEVACTGLHGANRLASNSLTEAAVTASWVAESVAGASYTRRRRVCSTLVPPRPDASGIRAVVSAALGIIRDGQTMREAVATLLPMAGHDGPKSGPALVSLMLAVAALRREESRGAHCRSDFPRRDADACTSRLTLNSAMQAAAALSCRAPIRST
SIO_010081: HB778_RS39590
subclass of: SO_0000673
so part of: HB778_RS39590
location: complement(400008..401549)
location: region:400008-401549:-1
so has part: feature:400008-401549:-1:exon

WP_183465606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400008-401549:-1:exon

HB778_RS39595
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nadA
locus tag: HB778_RS39595
old locus tag: HB778_39745
so part of: sequence
location: complement(401546..402520)
location: region:401546-402520:-1
so has part: feature:401546-402520:-1:exon
subclass of: SO_0000010

position:401546:-1
position: 401546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402520:-1
position: 402520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401546-402520:-1:exon

HB778_RS39595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nadA
locus tag: HB778_RS39595
old locus tag: HB778_39745
EC number: 2.5.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019863266.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quinolinate synthase NadA
translation: MTGALPTAASLYERVRRVVPPVEWSAFANDIDAILALKRERNAIILAHNYQTPEIFHCVADVVGDSLALARKAMAVDADIIVVAGVHFMAETAKLLNPNTTVLIPDMGAGCSLADSITAQDVQLMRQRYPEVPVVTYVNTSAAVKAQSDICCTSGNAKAVVESLGVPRVIMLPDEFLAKNIAAQTKVEIIAWKGHCEVHERFTPADIRELRAAHAGVVVLAHPECPPDVVREADFSGSTAAMSDYVEREKPARVVLMTECSMSDNVAVAHPDVEFVRPCNLCPHMKRITLANIRAALEENRYEIRIDPGIADPARRAVERMLSI
SIO_010081: HB778_RS39595
subclass of: SO_0000673
so part of: HB778_RS39595
location: complement(401546..402520)
location: region:401546-402520:-1
so has part: feature:401546-402520:-1:exon

WP_183455238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401546-402520:-1:exon

HB778_RS39600
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39600
old locus tag: HB778_39750
so part of: sequence
location: complement(402584..403543)
location: region:402584-403543:-1
so has part: feature:402584-403543:-1:exon
subclass of: SO_0000010

position:402584:-1
position: 402584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403543:-1
position: 403543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402584-403543:-1:exon

HB778_RS39600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39600
old locus tag: HB778_39750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDHKKTGTGKDRAAIKAGQVKVDLIAVVVAVNDSEPCVLTIGRMNTLPSGPFALEHRSLQSGLRGWVEQQTGHPLGYTEQLYTFADRDRIGAERERAISISYLALTRKEQSSTECGWRSWYEYFPWEDHRSGTPPVMLDFVRPRLIEWADGASDAATRRERRQRSAIAFGFDDRHWNEELALQRYELLYEAGLVQEAGSGTDATPLPLVPSESMVVDHRRIVATGIARLRSKIKYRPVVFELMQPTFTLLQLQRTVEALAGRLINKPNFRRLVEQQELVEKTGETSVDTGGRPAKLYRFRRGVLDERAVAGTKLPLTRA
SIO_010081: HB778_RS39600
subclass of: SO_0000673
so part of: HB778_RS39600
location: complement(402584..403543)
location: region:402584-403543:-1
so has part: feature:402584-403543:-1:exon

WP_183465607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402584-403543:-1:exon

HB778_RS39605
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39605
old locus tag: HB778_39755
pseudo: true
so part of: sequence
location: <403739..404197
location: region:403739-404197:1
so has part: feature:403739-404197:1:exon
subclass of: SO_0000010

position:403739:1
position: 403739
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:404197:1
position: 404197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403739-404197:1:exon

HB778_RS39605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39605
old locus tag: HB778_39755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533318.1
GO function: GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pantoate--beta-alanine ligase
SIO_010081: HB778_RS39605
subclass of: SO_0000673
so part of: HB778_RS39605
location: <403739..404197
location: region:403739-404197:1
so has part: feature:403739-404197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:403739-404197:1:exon

HB778_RS43010
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS43010
so part of: sequence
location: 404309..404701
location: region:404309-404701:1
so has part: feature:404309-404701:1:exon
subclass of: SO_0000010

position:404309:1
position: 404309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404701:1
position: 404701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404309-404701:1:exon

HB778_RS43010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS43010
inference: COORDINATES: protein motif:HMM:NF015437.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autoinducer binding domain-containing protein
translation: MHRLFEKFIEQLSASVDAADLHEAMASAAAGLEFPLFAYFTYPPASSDTPLVISNYPSSWTSNYLRLRYHSVDPVILRGLRGLNTFHWGLDRDHRYLPASQQEVLENAAQFGIRCGLTMSIHDHRGRFAG
SIO_010081: HB778_RS43010
subclass of: SO_0000673
so part of: HB778_RS43010
location: 404309..404701
location: region:404309-404701:1
so has part: feature:404309-404701:1:exon

WP_192021960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404309-404701:1:exon

HB778_RS43015
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS43015
so part of: sequence
location: 404865..405017
location: region:404865-405017:1
so has part: feature:404865-405017:1:exon
subclass of: SO_0000010

position:404865:1
position: 404865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405017:1
position: 405017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404865-405017:1:exon

HB778_RS43015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS43015
inference: COORDINATES: protein motif:HMM:NF012422.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR C-terminal-related transcriptional regulator
translation: MGGAAWDISQILGLSKRTVTFHLENAKAKLGVRTINQAVARMAASGHATT
SIO_010081: HB778_RS43015
subclass of: SO_0000673
so part of: HB778_RS43015
location: 404865..405017
location: region:404865-405017:1
so has part: feature:404865-405017:1:exon

WP_280515988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404865-405017:1:exon

HB778_RS39615
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39615
old locus tag: HB778_39765
so part of: sequence
location: 405501..407372
location: region:405501-407372:1
so has part: feature:405501-407372:1:exon
subclass of: SO_0000010

position:405501:1
position: 405501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407372:1
position: 407372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405501-407372:1:exon

HB778_RS39615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39615
old locus tag: HB778_39765
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872138.1
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase family protein
translation: MTYRRDIDGLRALAVLPVVLFHFGISAIPGGFTGVDIFFVISGYLITGSLLDDLERGEFSIVSFYWRRARRILPALIFVTLLTCIAALFILLPSDLHEFSLSVIAASTFWSNIYFWKTSNYFSIDAELRPLLHTWSLSVEEQYYIFAPILMFLIYRYFAKRWLTALLPIILGSFVLAVMATWLAPSAGFYLLPTRVWELMLGAVLMLKRPPPLNNQFLMEMVGLAGFGLLAIGFFAISESDPFPGYNALYPCLGTALLIYVGQNSPSTIASRILEVRPLVLIGLISYSLYLVHWPINAFAHYLSLQNLDPSIIIAMTVASFALAAFSWKYIEQPFRQKRSFTAPLPIFAFSAGAIALVCVGGAAGAIGNGFPQRFPEYAQQRIPAGDWLEGTCFNEGSSRIESWNIEDCTRTRGFATTVLLWGDSFAAHYVSGLEANKKKIQANVVEYTYAGCPPILSYFSYARPDCIRFNQKALEIIRDAGIKTVVLSGRWTDYEARSFDGLQQTIDTLRGRGVRMFVIGQSPQFITDVRKIAFFAKRRNSDDTYWPMAMDPDINNRMRSFTKGATFIDPLKFLCSAGRCPYADAGEFLYFDYGHFSSVGAILAISKYWPVLATDNALAVTK
SIO_010081: HB778_RS39615
subclass of: SO_0000673
so part of: HB778_RS39615
location: 405501..407372
location: region:405501-407372:1
so has part: feature:405501-407372:1:exon

WP_183465608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405501-407372:1:exon

HB778_RS39620
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39620
old locus tag: HB778_39770
so part of: sequence
location: 407525..408739
location: region:407525-408739:1
so has part: feature:407525-408739:1:exon
subclass of: SO_0000010

position:407525:1
position: 407525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408739:1
position: 408739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407525-408739:1:exon

HB778_RS39620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39620
old locus tag: HB778_39770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012881228.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS701 family transposase
translation: MIRRSWMTGASIETTLELWASSLRDVKARMRGLFTQERVAASANLFLDGLLGDERRKTGWMRAEAAGDPGPWRQQAVLGRGRWDADALRDIVREYVVENLATDDAVLVIDETGFLKQGKTSCGVARQYTGSAGKITNCQIGVFAAYVSARGHAFIDRALYLPKSWTGDRARLAATHVPEAIAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTLRRACKGYVLGVKSDHHFGSWSGKPPVAGTAQEIARDLDPTAWQRLSAGEGTKGARLHDWAYCELADLDADEYNETKSGLWTRGLLIRRNISDGDLAFFTTWCPAGTGIQTLVSVEGHRWAIEDSFETAKNELGLDHNETRSWHGWHRHVSLVMLAFAMMAVIRYRANDVTPQKRPRMPTIRI
SIO_010081: HB778_RS39620
subclass of: SO_0000673
so part of: HB778_RS39620
location: 407525..408739
location: region:407525-408739:1
so has part: feature:407525-408739:1:exon

WP_183445108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407525-408739:1:exon

HB778_RS42515
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42515
old locus tag: HB778_39780
pseudo: true
so part of: sequence
location: complement(<409186..409562)
location: region:409186-409562:-1
so has part: feature:409186-409562:-1:exon
subclass of: SO_0000010

position:409186:-1
position: 409186
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:409562:-1
position: 409562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409186-409562:-1:exon

HB778_RS42515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42515
old locus tag: HB778_39780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913834.1
GO function: GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
SIO_010081: HB778_RS42515
subclass of: SO_0000673
so part of: HB778_RS42515
location: complement(<409186..409562)
location: region:409186-409562:-1
so has part: feature:409186-409562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409186-409562:-1:exon

HB778_RS39635
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39635
old locus tag: HB778_39785
so part of: sequence
location: 409887..410477
location: region:409887-410477:1
so has part: feature:409887-410477:1:exon
subclass of: SO_0000010

position:409887:1
position: 409887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410477:1
position: 410477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409887-410477:1:exon

HB778_RS39635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39635
old locus tag: HB778_39785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003551805.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NodA family N-acyltransferase
translation: MGSDVRWKLCWENELQLADHVELSDFFLKTYGRHGAFLAKPFEGGRSWAGARPEFRAIGYDAHGIAAHIGILRRFIKVGEVDLLVAEIGLYGVRPDLEGLGISFSLSVVYPLLQRMGVPFVFGTVRQAMRNHVERFCRGGLASIVSGVEVRSTLANIHPYMPPTRVEDVIVFVAPIGRSMDEWPPGTLIDRNGPEL
SIO_010081: HB778_RS39635
subclass of: SO_0000673
so part of: HB778_RS39635
location: 409887..410477
location: region:409887-410477:1
so has part: feature:409887-410477:1:exon

WP_183455235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409887-410477:1:exon

HB778_RS39640
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39640
old locus tag: HB778_39790
so part of: sequence
location: 410750..411031
location: region:410750-411031:1
so has part: feature:410750-411031:1:exon
subclass of: SO_0000010

position:410750:1
position: 410750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411031:1
position: 411031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410750-411031:1:exon

HB778_RS39640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39640
old locus tag: HB778_39790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533528.1
GO function: GO:0000036 - acyl carrier activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl carrier protein
translation: MADQLATEIITIIKKRVESENFAGAFRPIVGEITTETEVTALGIDSLGLADVLWDLEQAYGIKIEMNTSEAWSDLQNVGDIVKAIRSLLAEAA
SIO_010081: HB778_RS39640
subclass of: SO_0000673
so part of: HB778_RS39640
location: 410750..411031
location: region:410750-411031:1
so has part: feature:410750-411031:1:exon

WP_183465610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410750-411031:1:exon

HB778_RS39645
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39645
old locus tag: HB778_39795
so part of: sequence
location: 411032..412240
location: region:411032-412240:1
so has part: feature:411032-412240:1:exon
subclass of: SO_0000010

position:411032:1
position: 411032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412240:1
position: 412240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411032-412240:1:exon

HB778_RS39645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39645
old locus tag: HB778_39795
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003592717.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-[acyl-carrier-protein] synthase family protein
translation: MDRRVVITGIGGLCGLGTDAPSIWKEMREGRSAIGPIVTSELHGLTGTIGAEIKTLPEHDIDRKQLVTMDRFSLLAVLAAREAMRQAGLSCDERNAYRFGAIVGVGGSGWEAIEASYRALLLNGARRAGVMDVPKAMPSAAAGQVSMSLGLRGPVFGVTSACASANHAIASAVDQIRCGRADVMLAGGSDAPFVFCVVKAWEAMRVIAPDTCRPFSSDRRGLVLGEGAGMAVLESYEHATARGATIIAEIAGIGLSADAFNLVAPAVEGPEAAMRACLADAGLNAQDVDYINAHGTGTKANDRMETEAIKRVFGGHANSMSISSTKSMHAHCLGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPNVARERKVRVALSNAFAMAGMNAVLAFRQV
SIO_010081: HB778_RS39645
subclass of: SO_0000673
so part of: HB778_RS39645
location: 411032..412240
location: region:411032-412240:1
so has part: feature:411032-412240:1:exon

WP_183465611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411032-412240:1:exon

HB778_RS39650
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: fabG
locus tag: HB778_RS39650
old locus tag: HB778_39800
so part of: sequence
location: 412518..413255
location: region:412518-413255:1
so has part: feature:412518-413255:1:exon
subclass of: SO_0000010

position:412518:1
position: 412518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413255:1
position: 413255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412518-413255:1:exon

HB778_RS39650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: fabG
locus tag: HB778_RS39650
old locus tag: HB778_39800
EC number: 1.1.1.100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006216615.1
GO function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoacyl-[acyl-carrier-protein] reductase
translation: MLELTGRKALVTGASGGIGEAIARVLHAQGAVVGLHGTRVEKLETLAAELGDRVKLFPANLSNRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRRHGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTGKLNDKQKEAIMAAIPTRRMGTSAEVASAVAYLASNEAGYVTGQTIHVNGGMAMI
SIO_010081: HB778_RS39650
subclass of: SO_0000673
so part of: HB778_RS39650
location: 412518..413255
location: region:412518-413255:1
so has part: feature:412518-413255:1:exon

WP_183465612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412518-413255:1:exon

HB778_RS39655
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39655
old locus tag: HB778_39805
pseudo: true
so part of: sequence
location: complement(<413741..413964)
location: region:413741-413964:-1
so has part: feature:413741-413964:-1:exon
subclass of: SO_0000010

position:413741:-1
position: 413741
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:413964:-1
position: 413964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413741-413964:-1:exon

HB778_RS39655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39655
old locus tag: HB778_39805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006936016.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: HB778_RS39655
subclass of: SO_0000673
so part of: HB778_RS39655
location: complement(<413741..413964)
location: region:413741-413964:-1
so has part: feature:413741-413964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413741-413964:-1:exon

HB778_RS39660
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39660
old locus tag: HB778_39810
so part of: sequence
location: 414062..414493
location: region:414062-414493:1
so has part: feature:414062-414493:1:exon
subclass of: SO_0000010

position:414062:1
position: 414062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414493:1
position: 414493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414062-414493:1:exon

HB778_RS39660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39660
old locus tag: HB778_39810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHHEEIYIEPFENACHQLSKAWMHLIETNDFTDFAERRIGRIQGSPKGTLSMFALAPRSTFGSEEHFLVYAFRHTPNINQVACRLRLGSSVTRARSIASTRRDNLSIPSDTVWQAMPNHVAPIRCSMGEWPPGTLIDRSVPNL
SIO_010081: HB778_RS39660
subclass of: SO_0000673
so part of: HB778_RS39660
location: 414062..414493
location: region:414062-414493:1
so has part: feature:414062-414493:1:exon

WP_183465613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414062-414493:1:exon

HB778_RS39665
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nodB
locus tag: HB778_RS39665
old locus tag: HB778_39815
so part of: sequence
location: 414490..415146
location: region:414490-415146:1
so has part: feature:414490-415146:1:exon
subclass of: SO_0000010

position:414490:1
position: 414490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415146:1
position: 415146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414490-415146:1:exon

HB778_RS39665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nodB
locus tag: HB778_RS39665
old locus tag: HB778_39815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989982.1
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0009877 - nodulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chitooligosaccharide deacetylase NodB
translation: MKNVDYMCEVPSDCADGTQDRSVYLTFDDGPNPVCTPQILDLLAQHRVAATFFVIGAHAADQPELIRRMIAEGHEVANHTMTHPDLSRCEPGEVEREIVEASNAIRMACPEATVRRMRAPYGVWTEDVLTTSARAGLACVHWSVDPRDWARPGVDAIVDEVLTGVGPGAIVLLHDGWPEELKSATYASLRDQTVTALSILIPALHHRGFVIRPLPQHH
SIO_010081: HB778_RS39665
subclass of: SO_0000673
so part of: HB778_RS39665
location: 414490..415146
location: region:414490-415146:1
so has part: feature:414490-415146:1:exon

WP_183465614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414490-415146:1:exon

HB778_RS39670
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nodC
locus tag: HB778_RS39670
old locus tag: HB778_39820
so part of: sequence
location: 415161..416513
location: region:415161-416513:1
so has part: feature:415161-416513:1:exon
subclass of: SO_0000010

position:415161:1
position: 415161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416513:1
position: 416513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415161-416513:1:exon

HB778_RS39670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nodC
locus tag: HB778_RS39670
old locus tag: HB778_39820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636999.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
GO process: GO:0009877 - nodulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chitooligosaccharide synthase NodC
translation: MDLLTTTSTVAVACYALLSTVYKGMQAVYSLPPTVAPASEDLVGSDLWPSVDVIIPCYNEGPLTLSACLDSIANQEYAGKLRVYVVDDGSGNRDAVIPIHDNYAGDPRFDFILLPENVGKRKAQIAAIRRSSGDLVLNVDSDTTLASDVIRKLARKMQDPAIGAAMGQLTASNRSDTWLTRLIDMEYWLACNEERAAQARFGAVMCCCGPCAMYRRSSLLSLLDQYETQMFRGKPSDFGEDRHLTILMLEAGFRTEYVPDAIAVTVVPDRLGPYLRQQLRWARSTFRDTLLALRLLPGLDRYLTLDVVGQNLGPLLLALSVIAGIAQFALTATLPWPTILVIAAMTIIRCTVTACRARQARFIGFSLHTFINIFLLLPLKAYALCTLSNSDWLSRKTATLPNADKKQIIVANPIAGVGTGSSGSAEAIRRTDLPRDSSKLVNADSVCSAE
SIO_010081: HB778_RS39670
subclass of: SO_0000673
so part of: HB778_RS39670
location: 415161..416513
location: region:415161-416513:1
so has part: feature:415161-416513:1:exon

WP_183465615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415161-416513:1:exon

HB778_RS39675
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nodI
locus tag: HB778_RS39675
old locus tag: HB778_39825
so part of: sequence
location: 416745..417659
location: region:416745-417659:1
so has part: feature:416745-417659:1:exon
subclass of: SO_0000010

position:416745:1
position: 416745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417659:1
position: 417659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416745-417659:1:exon

HB778_RS39675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nodI
locus tag: HB778_RS39675
old locus tag: HB778_39825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation factor ABC transporter ATP-binding protein NodI
translation: MSKVAIDLAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGKITVLGEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSLLEFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLGRGKTIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHALIEEHIGCQVIEIFGGNPQELVSLIRPYVQRVEVSGETLFCYTADPEQVRVQLRGRAGLRLLERPPSLEDVFLRLTGREMEK
SIO_010081: HB778_RS39675
subclass of: SO_0000673
so part of: HB778_RS39675
location: 416745..417659
location: region:416745-417659:1
so has part: feature:416745-417659:1:exon

WP_183455228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416745-417659:1:exon

HB778_RS39680
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39680
old locus tag: HB778_39830
so part of: sequence
location: 417663..418451
location: region:417663-418451:1
so has part: feature:417663-418451:1:exon
subclass of: SO_0000010

position:417663:1
position: 417663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418451:1
position: 418451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417663-418451:1:exon

HB778_RS39680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39680
old locus tag: HB778_39830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878233.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MGKGFSAALPANAWNWIAVWRRNYLAWTKVALASILGNLADPMIYLFGLGTGLGMMVGRVEDASYPAFLAAGMVATSAMTASTFETIYATFPRMNEQRTWEAILHTQLTLGDIVLGELVWATTRAFLAGTAIAMVAVIAGYSAWSSVLYVLPVIALTGLAFASLAMIVTALAPSYHYFIFYQTLFLTPMLFLSGAVFPVTQLPSTFQHIAGILPLAHSIDLIRPGMLDRPAGDIALHIGALCIYAVVPFFLSMVLLRRRLLR
SIO_010081: HB778_RS39680
subclass of: SO_0000673
so part of: HB778_RS39680
location: 417663..418451
location: region:417663-418451:1
so has part: feature:417663-418451:1:exon

WP_183455227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417663-418451:1:exon

HB778_RS39685
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39685
old locus tag: HB778_39835
so part of: sequence
location: 418741..419487
location: region:418741-419487:1
so has part: feature:418741-419487:1:exon
subclass of: SO_0000010

position:418741:1
position: 418741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419487:1
position: 419487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418741-419487:1:exon

HB778_RS39685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39685
old locus tag: HB778_39835
EC number: 2.8.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015319224.1
GO function: GO:0050656 - 3'-phosphoadenosine 5'-phosphosulfate binding [Evidence IEA]; GO:0008146 - sulfotransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfotransferase
translation: MTHISPTPEPFAILAMPRTGTHYLEVLLNEHPNILSNGELLNEYDTNWPDKDRLLLGDRELLELAYVRCPTWSDKTVTHVGCKVNEPQFHDHPGFFAELARWPGLKVILVVRRNILESLRSLVQARQSGQWLKFSSDKDGAPPPRVRLPIDNCEAYFKTADAFYARVAHAFAPSNVLVIEYESLLQEPAACLGAVWDFLGVPGLQLSGRAILQRQEARPLDETVENFDELRLHFADGPYARFFDVAAV
SIO_010081: HB778_RS39685
subclass of: SO_0000673
so part of: HB778_RS39685
location: 418741..419487
location: region:418741-419487:1
so has part: feature:418741-419487:1:exon

WP_183455226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418741-419487:1:exon

HB778_RS39690
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39690
old locus tag: HB778_39840
so part of: sequence
location: 419704..419937
location: region:419704-419937:1
so has part: feature:419704-419937:1:exon
subclass of: SO_0000010

position:419704:1
position: 419704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419937:1
position: 419937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419704-419937:1:exon

HB778_RS39690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39690
old locus tag: HB778_39840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018643684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2061 domain-containing protein
translation: MFIPVPETHGRSIAKAVSWRITGSIDTFALSWLITGNVVSAGSIASAEVITKIVLYYLHERAWSFIPFGRRMILPAD
SIO_010081: HB778_RS39690
subclass of: SO_0000673
so part of: HB778_RS39690
location: 419704..419937
location: region:419704-419937:1
so has part: feature:419704-419937:1:exon

WP_183465616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419704-419937:1:exon

HB778_RS39695
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: cysD
locus tag: HB778_RS39695
old locus tag: HB778_39845
so part of: sequence
location: 420133..421038
location: region:420133-421038:1
so has part: feature:420133-421038:1:exon
subclass of: SO_0000010

position:420133:1
position: 420133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421038:1
position: 421038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420133-421038:1:exon

HB778_RS39695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: cysD
locus tag: HB778_RS39695
old locus tag: HB778_39845
EC number: 2.7.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010914955.1
GO function: GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO process: GO:0019419 - sulfate reduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfate adenylyltransferase subunit CysD
translation: MNVPLTHLQRLEAESIHIFREVAAAFAKPVMLYSVGKDSSVLMHLAMKAFYPAKPPFPFLHVDTTWKFREMIAFRDQMAQKLGFDLLVHVNEDGVRDNINPFDHGSNTHTHVMKTVALRQALDKYGFDAAFGGARRDEEKSRAKERIFSFRNAQHVWDPKNQRPEMWKIFNTRIASGESIRVFPLSNWTELDIWQYILQENIPIVPLYFAKQRPVVERDGMLILRDDERMKLRPGETVEDRLVRFRTLGCYPLTGAIESDADTLEAIVGEMLTARTSERQGRLIDRDEAGSMEKKKREGYF
SIO_010081: HB778_RS39695
subclass of: SO_0000673
so part of: HB778_RS39695
location: 420133..421038
location: region:420133-421038:1
so has part: feature:420133-421038:1:exon

WP_183465617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420133-421038:1:exon

HB778_RS39700
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: cysN
locus tag: HB778_RS39700
old locus tag: HB778_39850
so part of: sequence
location: 421041..422981
location: region:421041-422981:1
so has part: feature:421041-422981:1:exon
subclass of: SO_0000010

position:421041:1
position: 421041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422981:1
position: 422981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421041-422981:1:exon

HB778_RS39700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: cysN
locus tag: HB778_RS39700
old locus tag: HB778_39850
EC number: 2.7.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019857048.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0006790 - sulfur compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfate adenylyltransferase subunit CysN
translation: MRHIMAKSLAPTDGVRDYLAAQEKKSLLRFLTCGSVDDGKSTLIGRLLSDTKQIFEDQLAALERDSRKHGTTGDDIDFALLVDGLEAEREQGITIDVAYRFFATPKRKFIVADTPGHEQYTRNMATGASTADLAIVLIDARQGVLRQTRRHSIIASLLGIRHVVLAINKIDLVGFDEAVFERIVEDYRQFSQKLGFQTIVPIPMSARYGDNVTNRSDKTEWYSGPTLIEHLETVSVDEAAVELPFRFPVQYVNRPNLDFRGFAGTIASGSAAPGDEVVVAKSGKSSHVRRIVAHGGDLQKAVAGQAITLVLDDEVEVSRGNMLVSPAARPQVADQFAANIVWFDEHALLPGRSYILRTETDQTSATVTDLKYRVNVNDFAHEAAKSLEMNEVGICNISTRAPIAFDTFAENRTTGAFILIDRITNATVGTGMILHSLRRAENIHWQSLDVGKRVRADMKNQRPAVFWFTGLSGSGKSTIANLFEKKLYATGRHTYILDGDNVRHGLNRDLGFTDADRVENIRRVAEVARLMADAGLIVIVSFISPFSAERRMARELMADGEFVEVFVDTPFEECARRDPKGLYARALNGEIKNFTGVDSPYEVPEKPEIHLKTLGKSAEEMVEALELWLNERDIAQPPPADNGGSI
SIO_010081: HB778_RS39700
subclass of: SO_0000673
so part of: HB778_RS39700
location: 421041..422981
location: region:421041-422981:1
so has part: feature:421041-422981:1:exon

WP_183465618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421041-422981:1:exon

HB778_RS39705
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39705
old locus tag: HB778_39855
so part of: sequence
location: 423424..424866
location: region:423424-424866:1
so has part: feature:423424-424866:1:exon
subclass of: SO_0000010

position:423424:1
position: 423424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424866:1
position: 424866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423424-424866:1:exon

HB778_RS39705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39705
old locus tag: HB778_39855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006204752.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylmalonyl-CoA mutase subunit beta
translation: MGAGALTRDVEPENAERQRWLALAEKALAGASFEEKLVSHTDDNIRIEPLYDRSTAAEPTVRANPKSPWIVSQRVDDPDIDRARAQALEDVAQGATGLSLVFEGAPNAFGYGLPRTAQALETVLDGVPLNRIQIRIDAHPWSRAVADWLVALLSKRRSDPAKLNLSFGIDPAAIFAGTGRLRMSIEALQASMPQSLAHFFSMGVPGVLLEADGRVLHNAGATEAQELGIMLASAVSYLRMFETARQPLVYAAPHIGFALSVDQDQFLSVAKVRALRRLWARLQEACSIPNSTANIHAETSFRMMTALDPETNILRTTIACFAAASGGADSISILPHTIAHGLPAGFARRVARNAQLIMANESHIDHVADPAYGSGAVEALTAELCEMAWAELQTIEAEGGVLSSLQGGHIQARVHAAAARRNAAYQAGEPTIIATTLYPLKSERPVETLAAERRPAFTEGVAVCEPLFAVRIDQSIGASS
SIO_010081: HB778_RS39705
subclass of: SO_0000673
so part of: HB778_RS39705
location: 423424..424866
location: region:423424-424866:1
so has part: feature:423424-424866:1:exon

WP_183455222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423424-424866:1:exon

HB778_RS39710
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39710
old locus tag: HB778_39860
so part of: sequence
location: 424863..425024
location: region:424863-425024:1
so has part: feature:424863-425024:1:exon
subclass of: SO_0000010

position:424863:1
position: 424863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425024:1
position: 425024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424863-425024:1:exon

HB778_RS39710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39710
old locus tag: HB778_39860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPDFSQIGWVPPRRAPIEVKGQRMTPEGLVSIDAVNLHDAGSGQANLGRVVR
SIO_010081: HB778_RS39710
subclass of: SO_0000673
so part of: HB778_RS39710
location: 424863..425024
location: region:424863-425024:1
so has part: feature:424863-425024:1:exon

WP_183455494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424863-425024:1:exon

HB778_RS39715
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39715
old locus tag: HB778_39865
so part of: sequence
location: complement(425308..426345)
location: region:425308-426345:-1
so has part: feature:425308-426345:-1:exon
subclass of: SO_0000010

position:425308:-1
position: 425308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426345:-1
position: 426345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425308-426345:-1:exon

HB778_RS39715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39715
old locus tag: HB778_39865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976683.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MKYFAGLDVSLEETAICVVDEAGRIVKETRAASEPQALIEALRKVDLPLERIGLEACSLTAWLHDGMCADGLPAICIETRQANAAMKMMPNKTDRNDARALAQIMRTGWYRQVHVKSRQCRLWRSLLVARRTVLNETRTIENVVRAILREAGIKLGTPSRTAFASRVRELAGTDPVVMPLVEPLLTILATMLGEFARLTKQVLGLVRQEEVCRRLMSVPGVGPITALAFRATIDQPDRFRRSRDVGAHLGLTPARYQSGETDIQGKVSRCGDELARTALYEAAHSLLVLSKKWSSLRAWGMNVAKRRGMARARVAVARKLAVILHRMWSDATEFRFGKAPGRVSA
SIO_010081: HB778_RS39715
subclass of: SO_0000673
so part of: HB778_RS39715
location: complement(425308..426345)
location: region:425308-426345:-1
so has part: feature:425308-426345:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425308-426345:-1:exon

HB778_RS39720
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39720
old locus tag: HB778_39870
so part of: sequence
location: complement(426744..427889)
location: region:426744-427889:-1
so has part: feature:426744-427889:-1:exon
subclass of: SO_0000010

position:426744:-1
position: 426744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427889:-1
position: 427889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426744-427889:-1:exon

HB778_RS39720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39720
old locus tag: HB778_39870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAGHRASLRGFEIARLGEPAIRELLNLLQSKSNHRKLQTGPKTAFCRLYDWLAHESDDDAYEPLRDIIMRHSIETMPVGPEDEIFGRPVSTRKLHSVRTASIEFETHPKRLRKLLLLGKLIDETTRTVPDDKVLFDAEEGRTFIRRVFDALPMTDAAKYLNVPRLHDRGLLEHGFIRPVIELDQGVLTHYNFAKAALDDFLARLLAGADEPGEADPGFCNLLSAGKQACCAVMEIVRLKLEGKLTRTRKSPTDCGFLSLLVDPDEVRLLVRREEHGGLSLRETEKSLGVRSEVLTALLAQGHLPFRVGINPVNRCPQKLVMRADLDEFMRTYVSLIRLAKERGVHFSGLKSALEESGVPLAFDRETISTRFYRRDSLPSV
SIO_010081: HB778_RS39720
subclass of: SO_0000673
so part of: HB778_RS39720
location: complement(426744..427889)
location: region:426744-427889:-1
so has part: feature:426744-427889:-1:exon

WP_183465619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426744-427889:-1:exon

HB778_RS39725
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39725
old locus tag: HB778_39875
so part of: sequence
location: complement(428542..428898)
location: region:428542-428898:-1
so has part: feature:428542-428898:-1:exon
subclass of: SO_0000010

position:428542:-1
position: 428542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428898:-1
position: 428898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428542-428898:-1:exon

HB778_RS39725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39725
old locus tag: HB778_39875
inference: COORDINATES: protein motif:HMM:NF014505.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MALRAGIFPQPGQVLICDFGPEPDKIAEPGIMKGPLGVKPEMYKERHCVALSAGRGLTTIAPFSTVAPKTPQKYHYCIPPGAYPFFDPHEENWLKADMLETVSNERLDQPFWQGRGLT
SIO_010081: HB778_RS39725
subclass of: SO_0000673
so part of: HB778_RS39725
location: complement(428542..428898)
location: region:428542-428898:-1
so has part: feature:428542-428898:-1:exon

WP_183465620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428542-428898:-1:exon

HB778_RS39730
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39730
old locus tag: HB778_39880
so part of: sequence
location: complement(429577..429846)
location: region:429577-429846:-1
so has part: feature:429577-429846:-1:exon
subclass of: SO_0000010

position:429577:-1
position: 429577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429846:-1
position: 429846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429577-429846:-1:exon

HB778_RS39730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39730
old locus tag: HB778_39880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018898644.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTYPLRLADHVMEEAKQAAAEDNVSLNQLLSAFIADGVGHRRAILSLKKRAARGSTDAALAILDRAPDVAPDPGDELVEEGSSVSPKM
SIO_010081: HB778_RS39730
subclass of: SO_0000673
so part of: HB778_RS39730
location: complement(429577..429846)
location: region:429577-429846:-1
so has part: feature:429577-429846:-1:exon

WP_183455218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429577-429846:-1:exon

HB778_RS39735
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39735
old locus tag: HB778_39885
so part of: sequence
location: complement(429843..430280)
location: region:429843-430280:-1
so has part: feature:429843-430280:-1:exon
subclass of: SO_0000010

position:429843:-1
position: 429843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430280:-1
position: 430280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429843-430280:-1:exon

HB778_RS39735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39735
old locus tag: HB778_39885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018898645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MNVFDANVLLAGLRSSNGASNVIVREMIQGNVPFAVSPAVSLEYEDVLKRAGILGENPWITNEEIDVVLDAVFKRAKLVSPWFRFRPFLTDPKDDLYIECALAAGARTIVTSDRHFDIPAVGDFGISIIKAGAFVAEFRRRNQPS
SIO_010081: HB778_RS39735
subclass of: SO_0000673
so part of: HB778_RS39735
location: complement(429843..430280)
location: region:429843-430280:-1
so has part: feature:429843-430280:-1:exon

WP_183455217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429843-430280:-1:exon

HB778_RS39740
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39740
old locus tag: HB778_39890
so part of: sequence
location: complement(430857..431336)
location: region:430857-431336:-1
so has part: feature:430857-431336:-1:exon
subclass of: SO_0000010

position:430857:-1
position: 430857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431336:-1
position: 431336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430857-431336:-1:exon

HB778_RS39740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39740
old locus tag: HB778_39890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008837405.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ProQ/FinO family protein
translation: MSTASRGKSSAQLFRHLSAKWPSAFNPKAPRPLKIGIHHDIRALDGELSDDELRRALRAYTRMARYLARLDAGAARVDLDGKPAGEVSDADAATAKALLCARKDKQETKQTPEPSAKPEAPPKRKPKQTVVFKAKNTAHSPTGIVVETKRRRSFRKPMA
SIO_010081: HB778_RS39740
subclass of: SO_0000673
so part of: HB778_RS39740
location: complement(430857..431336)
location: region:430857-431336:-1
so has part: feature:430857-431336:-1:exon

WP_183455485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430857-431336:-1:exon

HB778_RS39745
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39745
old locus tag: HB778_39895
pseudo: true
so part of: sequence
location: 431697..>432832
location: region:431697-432832:1
so has part: feature:431697-432832:1:exon
subclass of: SO_0000010

position:431697:1
position: 431697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432832:1
position: 432832
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431697-432832:1:exon

HB778_RS39745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39745
old locus tag: HB778_39895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011084703.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS39745
subclass of: SO_0000673
so part of: HB778_RS39745
location: 431697..>432832
location: region:431697-432832:1
so has part: feature:431697-432832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431697-432832:1:exon

HB778_RS39750
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39750
old locus tag: HB778_39900
pseudo: true
so part of: sequence
location: complement(<432859..433170)
location: region:432859-433170:-1
so has part: feature:432859-433170:-1:exon
subclass of: SO_0000010

position:432859:-1
position: 432859
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:433170:-1
position: 433170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432859-433170:-1:exon

HB778_RS39750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39750
old locus tag: HB778_39900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611884.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: HB778_RS39750
subclass of: SO_0000673
so part of: HB778_RS39750
location: complement(<432859..433170)
location: region:432859-433170:-1
so has part: feature:432859-433170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432859-433170:-1:exon

HB778_RS39755
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39755
old locus tag: HB778_39905
so part of: sequence
location: complement(433839..434039)
location: region:433839-434039:-1
so has part: feature:433839-434039:-1:exon
subclass of: SO_0000010

position:433839:-1
position: 433839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434039:-1
position: 434039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433839-434039:-1:exon

HB778_RS39755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39755
old locus tag: HB778_39905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRTPKPPKGGLAGVDELQKSMREMRAAELAILNQLVKEKPELAKPDRHDDLLEEFKRRLEKSRPR
SIO_010081: HB778_RS39755
subclass of: SO_0000673
so part of: HB778_RS39755
location: complement(433839..434039)
location: region:433839-434039:-1
so has part: feature:433839-434039:-1:exon

WP_183465621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433839-434039:-1:exon

HB778_RS39760
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39760
old locus tag: HB778_39910
so part of: sequence
location: complement(434198..434285)
location: region:434198-434285:-1
so has part: feature:434198-434285:-1:exon
subclass of: SO_0000663

position:434198:-1
position: 434198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434285:-1
position: 434285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434198-434285:-1:exon

HB778_RS39760
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28104
locus tag: HB778_RS39760
old locus tag: HB778_39910
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(434244..434246),aa:Leu,seq:gag)
SIO_010081: HB778_RS39760
subclass of: SO_0000673
so part of: HB778_RS39760
location: complement(434198..434285)
location: region:434198-434285:-1
so has part: feature:434198-434285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434198-434285:-1:exon

HB778_RS42520
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42520
so part of: sequence
location: 434562..435077
location: region:434562-435077:1
so has part: feature:434562-435077:1:exon
subclass of: SO_0000010

position:434562:1
position: 434562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435077:1
position: 435077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434562-435077:1:exon

HB778_RS42520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42520
inference: COORDINATES: protein motif:HMM:NF014038.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CYTH domain-containing protein
translation: MQETELKLELSRSGAASLLRKNPFGSSPTILQQRSIYFDTPGWDLSKRGLSLRIRQSGNERIQTVKAGDGAAVGSFTREEWERPVYGDTPILDGPQIRDLLAGAGPKLAPLFEVHVKRHRWNVMDGDATIEVALDLGKVLAADREAPLCEIELEKKAGSRQRCLRSPGKST
SIO_010081: HB778_RS42520
subclass of: SO_0000673
so part of: HB778_RS42520
location: 434562..435077
location: region:434562-435077:1
so has part: feature:434562-435077:1:exon

WP_244662132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434562-435077:1:exon

HB778_RS42525
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42525
so part of: sequence
location: 435185..436012
location: region:435185-436012:1
so has part: feature:435185-436012:1:exon
subclass of: SO_0000010

position:435185:1
position: 435185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436012:1
position: 436012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435185-436012:1:exon

HB778_RS42525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42525
inference: COORDINATES: protein motif:HMM:NF017085.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CHAD domain-containing protein
translation: MSAATAFARIAAACLKQFRLNETALGWFRDAEAVHQARVSLRRLRSLCSICKSQFDDCRFDRLREELTWLASEFGDARNIDVMIDRASSEALSIRLQDARDEAYAAVEASLSSARARTLMIDAAEWISIRDWRTDQTDETLHEQSSRDFASGVFDRLWKKVAKGGNNLIDADDETRHEVRIAAKKLRYAAEFFEPLYKSKAEAKRHRRFIMAMKDLQDQLGSLNDLATAPDMLAALALSDVAGATDLFRSEDKSKLLEDAAEAHDTFVNTRRFWH
SIO_010081: HB778_RS42525
subclass of: SO_0000673
so part of: HB778_RS42525
location: 435185..436012
location: region:435185-436012:1
so has part: feature:435185-436012:1:exon

WP_244662133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435185-436012:1:exon

HB778_RS39770
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39770
old locus tag: HB778_39920
so part of: sequence
location: 436204..436563
location: region:436204-436563:1
so has part: feature:436204-436563:1:exon
subclass of: SO_0000010

position:436204:1
position: 436204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436563:1
position: 436563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436204-436563:1:exon

HB778_RS39770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39770
old locus tag: HB778_39920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015886710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MGKPLPLELRRRVVAYVDEGHGHREAARHFRVSPRFVNNLINLRRQTGSLEARRQGHVGGGKLEPHAEFVRLRLAQTGELTLDELCVELEVRGVSVHRSNVGRLLNRLGLSHKKNSTGQ
SIO_010081: HB778_RS39770
subclass of: SO_0000673
so part of: HB778_RS39770
location: 436204..436563
location: region:436204-436563:1
so has part: feature:436204-436563:1:exon

WP_183465622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436204-436563:1:exon

HB778_RS39775
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39775
old locus tag: HB778_39925
so part of: sequence
location: 436580..436825
location: region:436580-436825:1
so has part: feature:436580-436825:1:exon
subclass of: SO_0000010

position:436580:1
position: 436580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436825:1
position: 436825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436580-436825:1:exon

HB778_RS39775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39775
old locus tag: HB778_39925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MRQARELWTGRRKRFFNKALARLIFIDETSTNTKLTKRTGWAPKGERFRTHAPFGKWQTQTFIAGLRCHGLVAPWIVNTWR
SIO_010081: HB778_RS39775
subclass of: SO_0000673
so part of: HB778_RS39775
location: 436580..436825
location: region:436580-436825:1
so has part: feature:436580-436825:1:exon

WP_183455213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436580-436825:1:exon

HB778_RS39780
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39780
old locus tag: HB778_39930
so part of: sequence
location: complement(436986..437375)
location: region:436986-437375:-1
so has part: feature:436986-437375:-1:exon
subclass of: SO_0000010

position:436986:-1
position: 436986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437375:-1
position: 437375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436986-437375:-1:exon

HB778_RS39780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39780
old locus tag: HB778_39930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018688181.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GFA family protein
translation: MTKGSCLCGAVAYEVHGDLRPIVACHCNQCRKASGHYVAATQAELKDVVIKGDTLKWFQSSETAKRGFCSNCGSNLFWQGFGRPHISIWAGTIDGPTKLRMESQLYPESAGDYYDLPDIPVVEQSSLRE
SIO_010081: HB778_RS39780
subclass of: SO_0000673
so part of: HB778_RS39780
location: complement(436986..437375)
location: region:436986-437375:-1
so has part: feature:436986-437375:-1:exon

WP_183455484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436986-437375:-1:exon

HB778_RS42530
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42530
so part of: sequence
location: complement(437609..437959)
location: region:437609-437959:-1
so has part: feature:437609-437959:-1:exon
subclass of: SO_0000010

position:437609:-1
position: 437609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437959:-1
position: 437959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437609-437959:-1:exon

HB778_RS42530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGDGLARYSNGKYANQQEAAKADRLGIWAGTVQPPWEWRAEGRKNLPSQPAPLVGVTSGGAKSCNIKGNISTTGERIYHVPSQQNYEKTKITEDTGERWFCSEAEAQAAGWRAAKR
SIO_010081: HB778_RS42530
subclass of: SO_0000673
so part of: HB778_RS42530
location: complement(437609..437959)
location: region:437609-437959:-1
so has part: feature:437609-437959:-1:exon

WP_244662217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437609-437959:-1:exon

HB778_RS42535
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42535
pseudo: true
so part of: sequence
location: complement(<438001..438225)
location: region:438001-438225:-1
so has part: feature:438001-438225:-1:exon
subclass of: SO_0000010

position:438001:-1
position: 438001
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:438225:-1
position: 438225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438001-438225:-1:exon

HB778_RS42535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42535
inference: COORDINATES: protein motif:HMM:NF012774.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: thermonuclease family protein
SIO_010081: HB778_RS42535
subclass of: SO_0000673
so part of: HB778_RS42535
location: complement(<438001..438225)
location: region:438001-438225:-1
so has part: feature:438001-438225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438001-438225:-1:exon

HB778_RS39790
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39790
old locus tag: HB778_39940
so part of: sequence
location: 439086..440135
location: region:439086-440135:1
so has part: feature:439086-440135:1:exon
subclass of: SO_0000010

position:439086:1
position: 439086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440135:1
position: 440135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439086-440135:1:exon

HB778_RS39790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39790
old locus tag: HB778_39940
inference: COORDINATES: protein motif:HMM:NF020374.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1796 family putative cysteine peptidase
translation: MFKQAIKDTVATSVSPDTLPHDCSLYLLPKLNDLHFRRFRFARTASEPPPMESAFAYRCLHSARNEPTGNSLSRTTILSRAMMTGLASLMLRGSISAALMVRINTIDLPYLSKCWKASLFHSYLVPPKDRAMPYEAIFSLGSDCTPATQIRRYFKRRPSSCFDWIVTPIASIEEILADDGARFGLRVSACFNGTSAFCENYGVVYHHEFDRTTSNAVIFTPEALRSCREKLIYKYNKMLDIARTRKTLFVRYVSATDAPGDQQMGKTFGVDDLQEMVTLLEKKLGHSRFHVAYFRANGNAYDKSKFIGPVPERCSIHQENHVPDQLGEVEVWNVFFSKMGLSPDRPPLL
SIO_010081: HB778_RS39790
subclass of: SO_0000673
so part of: HB778_RS39790
location: 439086..440135
location: region:439086-440135:1
so has part: feature:439086-440135:1:exon

WP_183455212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439086-440135:1:exon

HB778_RS39795
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39795
old locus tag: HB778_39945
pseudo: true
so part of: sequence
location: 440197..441246
location: region:440197-441246:1
so has part: feature:440197-441246:1:exon
subclass of: SO_0000010

position:440197:1
position: 440197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441246:1
position: 441246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440197-441246:1:exon

HB778_RS39795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39795
old locus tag: HB778_39945
inference: COORDINATES: protein motif:HMM:NF023271.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3363 domain-containing protein
SIO_010081: HB778_RS39795
subclass of: SO_0000673
so part of: HB778_RS39795
location: 440197..441246
location: region:440197-441246:1
so has part: feature:440197-441246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440197-441246:1:exon

HB778_RS39800
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39800
old locus tag: HB778_39950
so part of: sequence
location: 441449..441643
location: region:441449-441643:1
so has part: feature:441449-441643:1:exon
subclass of: SO_0000010

position:441449:1
position: 441449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441643:1
position: 441643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441449-441643:1:exon

HB778_RS39800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39800
old locus tag: HB778_39950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAQSGAFNPSDLALLGRVFDHKTLRANPRNLREVLASRIVQEARIAEMSGFRRDDRGRSPNAS
SIO_010081: HB778_RS39800
subclass of: SO_0000673
so part of: HB778_RS39800
location: 441449..441643
location: region:441449-441643:1
so has part: feature:441449-441643:1:exon

WP_183455211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441449-441643:1:exon

HB778_RS39805
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39805
old locus tag: HB778_39955
pseudo: true
so part of: sequence
location: 441787..>442134
location: region:441787-442134:1
so has part: feature:441787-442134:1:exon
subclass of: SO_0000010

position:441787:1
position: 441787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442134:1
position: 442134
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441787-442134:1:exon

HB778_RS39805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39805
old locus tag: HB778_39955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010967462.1
note: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutamine--fructose-6-phosphate aminotransferase
SIO_010081: HB778_RS39805
subclass of: SO_0000673
so part of: HB778_RS39805
location: 441787..>442134
location: region:441787-442134:1
so has part: feature:441787-442134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441787-442134:1:exon

HB778_RS39810
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39810
old locus tag: HB778_39960
so part of: sequence
location: 442402..443523
location: region:442402-443523:1
so has part: feature:442402-443523:1:exon
subclass of: SO_0000010

position:442402:1
position: 442402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443523:1
position: 443523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442402-443523:1:exon

HB778_RS39810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39810
old locus tag: HB778_39960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015317176.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase III
translation: MHRVIISGIGVEVPEAKITNEELVASFNAWVDMENARRQETGEPPLPKSDSDFIVHASGVRTRHVIEREGILDPTRMAPRIPARPDDALSLEAEFGIAAARKALDHAGLSPSDIDLAICSASHHQRPYPAIAIEMQQVLGTKGAGFDMGLGCSSAAAALHIAVNLVRSGAHKRILVTTPEIITGHLNFRDRQTHFIFGDASVSMVVEGLAQGEKRPGRFEVLDTRIWTQMSNNIRTNLGYHTRTAQDDPYMINLEGNLIKQVGNKVFKEVTVAGQKFIVEFLAEHGLTPQAVRRFWLHQANARMNAMILKLAFGHEVDHDRAPMVLERLGNTAGAGAIIALSENHADMKPGDFGLICAFGAGYSIGGALLRML
SIO_010081: HB778_RS39810
subclass of: SO_0000673
so part of: HB778_RS39810
location: 442402..443523
location: region:442402-443523:1
so has part: feature:442402-443523:1:exon

WP_183455210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442402-443523:1:exon

HB778_RS42540
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42540
pseudo: true
so part of: sequence
location: complement(<443612..>443762)
location: region:443612-443762:-1
so has part: feature:443612-443762:-1:exon
subclass of: SO_0000010

position:443612:-1
position: 443612
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:443762:-1
position: 443762
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443612-443762:-1:exon

HB778_RS42540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009489968.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: HB778_RS42540
subclass of: SO_0000673
so part of: HB778_RS42540
location: complement(<443612..>443762)
location: region:443612-443762:-1
so has part: feature:443612-443762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443612-443762:-1:exon

HB778_RS42545
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42545
old locus tag: HB778_39965
pseudo: true
so part of: sequence
location: complement(<443842..444013)
location: region:443842-444013:-1
so has part: feature:443842-444013:-1:exon
subclass of: SO_0000010

position:443842:-1
position: 443842
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:444013:-1
position: 444013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443842-444013:-1:exon

HB778_RS42545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42545
old locus tag: HB778_39965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009762360.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HB778_RS42545
subclass of: SO_0000673
so part of: HB778_RS42545
location: complement(<443842..444013)
location: region:443842-444013:-1
so has part: feature:443842-444013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443842-444013:-1:exon

HB778_RS39820
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39820
old locus tag: HB778_39970
pseudo: true
so part of: sequence
location: 444241..448236
location: region:444241-448236:1
so has part: feature:444241-448236:1:exon
subclass of: SO_0000010

position:444241:1
position: 444241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448236:1
position: 448236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444241-448236:1:exon

HB778_RS39820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39820
old locus tag: HB778_39970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011090955.1
GO function: GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Ulp1 family isopeptidase
SIO_010081: HB778_RS39820
subclass of: SO_0000673
so part of: HB778_RS39820
location: 444241..448236
location: region:444241-448236:1
so has part: feature:444241-448236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444241-448236:1:exon

HB778_RS39825
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39825
old locus tag: HB778_39975
so part of: sequence
location: 448649..448936
location: region:448649-448936:1
so has part: feature:448649-448936:1:exon
subclass of: SO_0000010

position:448649:1
position: 448649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448936:1
position: 448936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448649-448936:1:exon

HB778_RS39825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39825
old locus tag: HB778_39975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METFDHGRSEEVFKLFGEMACAGQVIYLTHNRHLCEIAKAAIPSVTIHELGRLCSFSVGANARLGVNPSVSAEMAAKPTGRLVRRSKPRDREDKG
SIO_010081: HB778_RS39825
subclass of: SO_0000673
so part of: HB778_RS39825
location: 448649..448936
location: region:448649-448936:1
so has part: feature:448649-448936:1:exon

WP_183455207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448649-448936:1:exon

HB778_RS39830
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifH
locus tag: HB778_RS39830
old locus tag: HB778_39980
so part of: sequence
location: 449314..450207
location: region:449314-450207:1
so has part: feature:449314-450207:1:exon
subclass of: SO_0000010

position:449314:1
position: 449314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450207:1
position: 450207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449314-450207:1:exon

HB778_RS39830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifH
locus tag: HB778_RS39830
old locus tag: HB778_39980
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675840.1
GO component: GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron protein
translation: MSGLRQIAFYGKGGIGKSTTSQNTLAALVDLGQKILIVGCDPKADSTRLILNSKAQDTVLHLAAEEGSVEDLELQDVLKVGYKGIKCVESGGPEPGVGCAGRGVITSINFLEENGAYDDVDYVSYDVLGDVVCGGFAMPIREGKAQEIYIVMSGEMMALYAANNIAKGILKYAHSGGVRLGGLICNERQTDRELDLAEALASRLNSKLIHFVPRDNIVQHAELRKMSVIQYAPDSKQAGEYRALAEKIHGNSGQGTVPTPITMEELEDMLLDFGIMKTDEQMLAELQAKEATKAAAQ
SIO_010081: HB778_RS39830
subclass of: SO_0000673
so part of: HB778_RS39830
location: 449314..450207
location: region:449314-450207:1
so has part: feature:449314-450207:1:exon

WP_183455206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449314-450207:1:exon

HB778_RS39835
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifD
locus tag: HB778_RS39835
old locus tag: HB778_39985
so part of: sequence
location: 450306..451799
location: region:450306-451799:1
so has part: feature:450306-451799:1:exon
subclass of: SO_0000010

position:450306:1
position: 450306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451799:1
position: 451799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450306-451799:1:exon

HB778_RS39835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifD
locus tag: HB778_RS39835
old locus tag: HB778_39985
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247185.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein alpha chain
translation: MSLDYENDGTLHAKLIEEVLSQYPDKAAKRRKKHLSVAKSGDEAGEVVSECDVKSNIKSIPGVMTIRGCAYAGSKGVVWGPIKDMVHISHGPVGCGQYSWSQRRNYYVGTTGIDTFGTMQFTSDFQEKDIVFGGDKKLEQIIDEIEGLFPLNNGMSVQSECPIGLIGDDTEAVSRNKAKEHGKTIVPVRCEGFRGVSQSLGHHIANDAIRDWVFEKKDVEFEAGPYDVNVIGDYNIGGDAWASRILLEEIGLRVVGNWSGDATLAEIERAPKAKLNLIHCYRSMNYICRHMEEKYGVAWMEYNFFGPSQIEASLRKIAMHFGPEIEEKTEKVIAKYRPLVDAVIAKYRPRLEGNTVMLYVGGLRPRHVITAYEDLGMVIVGTGYEFAHNDDYQRTGHYVRNGTLIYDDVTGYELEKFIEGVRPNLVGSGIKEKYPVQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDVDLAINNPVWGLYDAPWKKSPSRGRAMAAE
SIO_010081: HB778_RS39835
subclass of: SO_0000673
so part of: HB778_RS39835
location: 450306..451799
location: region:450306-451799:1
so has part: feature:450306-451799:1:exon

WP_183465623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450306-451799:1:exon

HB778_RS39840
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifK
locus tag: HB778_RS39840
old locus tag: HB778_39990
so part of: sequence
location: 451933..453474
location: region:451933-453474:1
so has part: feature:451933-453474:1:exon
subclass of: SO_0000010

position:451933:1
position: 451933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453474:1
position: 453474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451933-453474:1:exon

HB778_RS39840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifK
locus tag: HB778_RS39840
old locus tag: HB778_39990
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006331758.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein subunit beta
translation: MPQSAEKILDHAPLFREPEYRQMLAEKKLNFECPHPDQIVTDQREFTKTWEYREKNLAREALVVNPAKACQPLGAVFAAAGFERTMSFVHGSQGCVAYYRSHLSRHFKEPASAVSSSMTEDAAVFGGLKNMVDGLANTYQLYDPKMIAVSTTCMAEVIGDDLHSFIENAKDENSVPRDFDVPFAHTPAFVGSHVDGYDVMVKGILEHFWKGQERTEAGETINIIPGFDGFCVGNNRELKRLLDLMSVSYTFIQDASDQFDTPSDGEYRMYDGGTKIEDVKEALNAEATLSLQYYNTRKTLDYCEQVGQATASFHYPLGVQATDEFLMKVSAISGKEIPETIRLERGRLVDAMADSQSWLHGKKYAIYGDPDFVYAMARFVMETGGEPTHCLATNGSSAWAAEMKELLASSPFGKDAQVWPGKDLWAMRSLLFTEPVDLLIGNSYGKYLERDTGTPLIRLMFPIFDRHHHHRFALMGYQGGLRVLTTILDKIFDKLDRETSETGVTDYSYDLTR
SIO_010081: HB778_RS39840
subclass of: SO_0000673
so part of: HB778_RS39840
location: 451933..453474
location: region:451933-453474:1
so has part: feature:451933-453474:1:exon

WP_183465624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451933-453474:1:exon

HB778_RS39845
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifE
locus tag: HB778_RS39845
old locus tag: HB778_39995
so part of: sequence
location: 453538..455028
location: region:453538-455028:1
so has part: feature:453538-455028:1:exon
subclass of: SO_0000010

position:453538:1
position: 453538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455028:1
position: 455028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453538-455028:1:exon

HB778_RS39845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifE
locus tag: HB778_RS39845
old locus tag: HB778_39995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009762336.1
GO function: GO:0005488 - binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
translation: MSSLSAKIQDVFNEPACDQNRGKDAKARKEGCSKPLTPGAAAGGCAFDGAKIVLQPITDVAHLVHAPLACEGNSWDNRGAASSGPTLWRTSFTTDLTELDVVMGQGERKLFKAIREIREAYAPSAIFVYSTCVTALIGDDIEAVCKRAREKFGLPVVPVNAPGLAGSKNLGNKLAAEALLDHVIGTVEPDDAGPYDINILGEFNLSGEFWLVKPLLDRLGIRVRACIPGDARYLDVASAHRARAAMIVCSTALINLARKMEERWDIPFFEGSFYGITDTSEALRNIAELLVRKGADREILNRTRTLIAVEEAIAWRKLEAYRRRLQGKRVLLNTGGVKSWSIVHALMEIGMEIVGTSVKKSTVEDKQRIKQILKDDNHMFEQMAARDLYAMLSEHKADIMLSGGRTQFIALKAKTPWLDINQERQHPYAGYDGMVELVRQIDLAIHNPIWSQVREPAPWDCQPAVEDELPGTRSETATLHAVQEVAGTTADDCGER
SIO_010081: HB778_RS39845
subclass of: SO_0000673
so part of: HB778_RS39845
location: 453538..455028
location: region:453538-455028:1
so has part: feature:453538-455028:1:exon

WP_183465625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453538-455028:1:exon

HB778_RS39850
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifN
locus tag: HB778_RS39850
old locus tag: HB778_40000
so part of: sequence
location: 455038..456420
location: region:455038-456420:1
so has part: feature:455038-456420:1:exon
subclass of: SO_0000010

position:455038:1
position: 455038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456420:1
position: 456420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455038-456420:1:exon

HB778_RS39850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifN
locus tag: HB778_RS39850
old locus tag: HB778_40000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913612.1
GO function: GO:0005488 - binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
translation: MARILSQTKSAAVNPLKSSQPLGAALAFLGVEGAMPLFHGSQGCTSFALVLFVRHFKEAIPLQTTAMDEVTTILGGADNLEEAILNLKVRTKPKLIGVCTTALVETRGEDCAGDIASIRLKHAEEIAGTEIVLANTPDFDGAIEEGWAKAVTAMIEGITRPGEQVRQSKKIAILPGWNLTVADIEHLREMVESFGLKPVILPDVSGSLDGTVPDRWVTTTYGGTGVEDIRELGTAEHCIAIGEHMRRPAQVLQKLTGVPYVLFQSLTGLKGADRFVSLLSAISGASVPAGVRRRRGQLQDALLDGHFHFGGKKIAIAAEPDQLYQLATFFVGMGSEIAAAVATTDMSKILEKVPAQSVQIGDLGDLEALAAGADLLVTHSHGRQAAQRLGIPLMRVGFPVFDRLGSQHKLTILYQGTRDLVFEVANIFQAYWKAPTPEELDPLRKRETPDGPRPSPLTRH
SIO_010081: HB778_RS39850
subclass of: SO_0000673
so part of: HB778_RS39850
location: 455038..456420
location: region:455038-456420:1
so has part: feature:455038-456420:1:exon

WP_183465626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455038-456420:1:exon

HB778_RS39855
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: nifX
locus tag: HB778_RS39855
old locus tag: HB778_40005
so part of: sequence
location: 456386..456880
location: region:456386-456880:1
so has part: feature:456386-456880:1:exon
subclass of: SO_0000010

position:456386:1
position: 456386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456880:1
position: 456880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456386-456880:1:exon

HB778_RS39855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: nifX
locus tag: HB778_RS39855
old locus tag: HB778_40005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016558420.1
GO function: GO:0051540 - metal cluster binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen fixation protein NifX
translation: MGPVRRLSLVTDEVHAVMPTRRTGALRVAIATQDMKDLNAHFGSAKRFAVYDVTREEWKLVEAVAFDDVSDESGEHRSEGDDRITPKVEALKGCHLLFCLAIGGPSAAKIVSAKIHPIKVPHPQSIQEVLLRTQMMLRTCPPPWLRKVLAEAGVTEKKPSFEDD
SIO_010081: HB778_RS39855
subclass of: SO_0000673
so part of: HB778_RS39855
location: 456386..456880
location: region:456386-456880:1
so has part: feature:456386-456880:1:exon

WP_183465627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456386-456880:1:exon

HB778_RS39860
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39860
old locus tag: HB778_40010
so part of: sequence
location: 456898..457377
location: region:456898-457377:1
so has part: feature:456898-457377:1:exon
subclass of: SO_0000010

position:456898:1
position: 456898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457377:1
position: 457377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456898-457377:1:exon

HB778_RS39860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39860
old locus tag: HB778_40010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008878158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifX-associated nitrogen fixation protein
translation: MSDAAASTAVAEDEAALATPFVKCLVRLIRAQDSYGSWEGKPDAELLGDFIITKEQRRAIPIIGDPDPDVLWRLDKFYAAVGLAIEERCGLMASPMMEMSHEGFGRVLFAAGRLVVLSKTLRDVHRFGFETFGKLAAAGTKLVGDGIAAIEAYPDVARA
SIO_010081: HB778_RS39860
subclass of: SO_0000673
so part of: HB778_RS39860
location: 456898..457377
location: region:456898-457377:1
so has part: feature:456898-457377:1:exon

WP_183455200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456898-457377:1:exon

HB778_RS39865
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39865
old locus tag: HB778_40015
so part of: sequence
location: 457405..458190
location: region:457405-458190:1
so has part: feature:457405-458190:1:exon
subclass of: SO_0000010

position:457405:1
position: 457405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458190:1
position: 458190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457405-458190:1:exon

HB778_RS39865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39865
old locus tag: HB778_40015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019863334.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MSGLEQLRWPAHSTDAVETDLVPGVALMKPLVLICSQDAEFYLFLSHILEVDGFTSEPAGGAKEALAMADEREFQAVVLDCGPGSITGSAICARLKREPRTGALPIIALIAPGAENQHLDLLKAGIDESFVRPIAPAKLLDCLRARLALTKRGANGVENGGWLSCGDLEMRLDAHRVRGNGHEIHLGPIEFNLLRLLLETPGKVFTRDELIGAAWPANIHVGVRTVDVHMSRLRKALKAASPSTVIRTTRSAGYSLERPDG
SIO_010081: HB778_RS39865
subclass of: SO_0000673
so part of: HB778_RS39865
location: 457405..458190
location: region:457405-458190:1
so has part: feature:457405-458190:1:exon

WP_183465628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457405-458190:1:exon

HB778_RS39870
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39870
old locus tag: HB778_40020
so part of: sequence
location: 458296..459183
location: region:458296-459183:1
so has part: feature:458296-459183:1:exon
subclass of: SO_0000010

position:458296:1
position: 458296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459183:1
position: 459183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458296-459183:1:exon

HB778_RS39870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39870
old locus tag: HB778_40020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913616.1
GO function: GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MGFKSVLCVTGSDHSDQDVRTAAGLCAEVGAYLSVLIMSPPPLVMSPPPLGDGILEWPVQRAQAIAMLDKRFRQIETFSQDMAHLEKTSKEIQKLLKAMSLCSDVDTDYCDEADVGDAVRQRAHCTDLTIVGPALLNDNNLGPLVINGSLFDTGKPVLVVPKGAEATLSPRRVLVGWDSRVEASRAVREALDLLSRAEEVRVTLVDPKATFNGNGAEPGADIAAYLTRHGARVSVDRLPSAGKPVATVLAQHAIDTSADMIVMGAYGSRRLRERLFGGVTRWIVGKLPLPLFLAR
SIO_010081: HB778_RS39870
subclass of: SO_0000673
so part of: HB778_RS39870
location: 458296..459183
location: region:458296-459183:1
so has part: feature:458296-459183:1:exon

WP_183455198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458296-459183:1:exon

HB778_RS39875
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39875
old locus tag: HB778_40025
so part of: sequence
location: 459925..460104
location: region:459925-460104:1
so has part: feature:459925-460104:1:exon
subclass of: SO_0000010

position:459925:1
position: 459925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460104:1
position: 460104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459925-460104:1:exon

HB778_RS39875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39875
old locus tag: HB778_40025
inference: COORDINATES: protein motif:HMM:NF017559.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVFASRGWTGFVVKNSCVYGAAINLEGASIRMGASPGTSRREGVARLEGRSWRRREPT
SIO_010081: HB778_RS39875
subclass of: SO_0000673
so part of: HB778_RS39875
location: 459925..460104
location: region:459925-460104:1
so has part: feature:459925-460104:1:exon

WP_244662207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459925-460104:1:exon

HB778_RS39880
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: istA
locus tag: HB778_RS39880
old locus tag: HB778_40030
so part of: sequence
location: 460172..461680
location: region:460172-461680:1
so has part: feature:460172-461680:1:exon
subclass of: SO_0000010

position:460172:1
position: 460172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461680:1
position: 461680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460172-461680:1:exon

HB778_RS39880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: istA
locus tag: HB778_RS39880
old locus tag: HB778_40030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488953.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MSGSHITDQQSRLYMQNRQKHSVPVAAAKSGFSPSTGYRIESDPRPPSEKKAKHERRRPDPLEGIFTEEVVPMLQSAPGLRPVGILRELCKRHPELDSGIRRTLERRIRAWRAIHGGDQDVIFRQVHEPGRMGLSDFTHALGLKVTIASVTFDYLLYHFRLAYSGFEHAEIVEGGESFAALTSGLQNALWSLGGAPRDHRTDSLSAAFRNLNADTAQDMTDRYEALCAHYGMKASRNNRGVAHENGAVEGSHGDLKRELEDALLLRGTRDFADVTSFAAFIDEVVGQRNARRAREIAIERESLLALPRKRQPEGEDEIVYVTSSGGFTLRRVFYTVPSRLIGHRLRARLFKEHIELFLGGTSLMKLPRVRGQLGPTQHVVNYHHVIHSLRQKPGALPRLGYRDQLFPRDAYRNLYNAAMERLPERDACRLTVELLSLAHERNVEAALAHAIQGELDAGTLPTLDGMRARFAPNPACVPQVSVNLGKLVDYDRLIGTRVEVTA
SIO_010081: HB778_RS39880
subclass of: SO_0000673
so part of: HB778_RS39880
location: 460172..461680
location: region:460172-461680:1
so has part: feature:460172-461680:1:exon

WP_183465630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460172-461680:1:exon

HB778_RS39885
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: istB
locus tag: HB778_RS39885
old locus tag: HB778_40035
pseudo: true
so part of: sequence
location: 461677..462482
location: region:461677-462482:1
so has part: feature:461677-462482:1:exon
subclass of: SO_0000010

position:461677:1
position: 461677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462482:1
position: 462482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461677-462482:1:exon

HB778_RS39885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: istB
locus tag: HB778_RS39885
old locus tag: HB778_40035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014529334.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISRm9 family helper ATPase IstB
SIO_010081: HB778_RS39885
subclass of: SO_0000673
so part of: HB778_RS39885
location: 461677..462482
location: region:461677-462482:1
so has part: feature:461677-462482:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461677-462482:1:exon

HB778_RS39890
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39890
old locus tag: HB778_40040
so part of: sequence
location: 463333..464490
location: region:463333-464490:1
so has part: feature:463333-464490:1:exon
subclass of: SO_0000010

position:463333:1
position: 463333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464490:1
position: 464490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463333-464490:1:exon

HB778_RS39890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39890
old locus tag: HB778_40040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018459006.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlpA disulfide reductase family protein
translation: MVLQMESPAPSIKVEDWLRGEPLTNFQPGKVYIVEFWATWCGPCVSAMPHLVQLQEKYKDSGLEVIGVAADEQAPTADEARTKLDAWLSEKCSNLNYRIAFDHTGEMNKLWREPSFSVGIPASFVVDRDGHIAFVGHPMQLDEVLPKVLNGSWRTSDEAKAADKERIASHQRTAREQSLTKPIYAKLRPAMEAKDWTAALTAVEEGLALMPDNIEFRRTHANLLLHKLRDMRAGLPLMRQLVEDAIDKKFEAVSWMVMALNQLFDPEMDNSHLPRAERFAMGDKLSEQILTLNPPQGDGPLKFLWYVPLAQYYYESGNKDRAIELIEVALKSLGDREPMPDHIKQHYLTPLLQALANYTGEHACYADLCVVPQNKAPENQTAVAS
SIO_010081: HB778_RS39890
subclass of: SO_0000673
so part of: HB778_RS39890
location: 463333..464490
location: region:463333-464490:1
so has part: feature:463333-464490:1:exon

WP_183465631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463333-464490:1:exon

HB778_RS39895
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39895
old locus tag: HB778_40045
so part of: sequence
location: 464851..465318
location: region:464851-465318:1
so has part: feature:464851-465318:1:exon
subclass of: SO_0000010

position:464851:1
position: 464851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465318:1
position: 465318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464851-465318:1:exon

HB778_RS39895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39895
old locus tag: HB778_40045
inference: COORDINATES: protein motif:HMM:TIGR02935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifX-associated nitrogen fixation protein
translation: MSDAAASPAVAEDEAALARPFVKCLLRLIRAQDFDGSWQGRADAELLADFIITKEQRRAIPIIGDPDPDVLWRLDTFYTAVGLAIEERSGLMTSPMMEMKPMRASGTSFSRSGGWSFCQDVHRFGFETFRTLAEAGTKLVDDATAAIAYPDVARA
SIO_010081: HB778_RS39895
subclass of: SO_0000673
so part of: HB778_RS39895
location: 464851..465318
location: region:464851-465318:1
so has part: feature:464851-465318:1:exon

WP_183465632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464851-465318:1:exon

HB778_RS39900
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39900
old locus tag: HB778_40050
so part of: sequence
location: 465345..465548
location: region:465345-465548:1
so has part: feature:465345-465548:1:exon
subclass of: SO_0000010

position:465345:1
position: 465345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465548:1
position: 465548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465345-465548:1:exon

HB778_RS39900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39900
old locus tag: HB778_40050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913626.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CCE_0567 family metalloprotein
translation: MSNLDEMGKKVRKLQLRAAVAKMKLRDLAEDLPVQWTEIEEVAEKAYAVFAELDGAKRELAAMKNLR
SIO_010081: HB778_RS39900
subclass of: SO_0000673
so part of: HB778_RS39900
location: 465345..465548
location: region:465345-465548:1
so has part: feature:465345-465548:1:exon

WP_183465900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465345-465548:1:exon

HB778_RS39905
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: fdxB
locus tag: HB778_RS39905
old locus tag: HB778_40055
so part of: sequence
location: 465545..465862
location: region:465545-465862:1
so has part: feature:465545-465862:1:exon
subclass of: SO_0000010

position:465545:1
position: 465545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465862:1
position: 465862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465545-465862:1:exon

HB778_RS39905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: fdxB
locus tag: HB778_RS39905
old locus tag: HB778_40055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin III, nif-specific
translation: MRSTFTTRDGSIWLPEYLTAIDGKICIGCGRCFKVCSREVMHLYGVHDEGEILGACDGEDDDFDGELNRMIMFVDNAGRCIGCGACARVCPKNCQTHVAADQVAA
SIO_010081: HB778_RS39905
subclass of: SO_0000673
so part of: HB778_RS39905
location: 465545..465862
location: region:465545-465862:1
so has part: feature:465545-465862:1:exon

WP_183465633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465545-465862:1:exon

HB778_RS39910
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39910
old locus tag: HB778_40060
so part of: sequence
location: 465867..466214
location: region:465867-466214:1
so has part: feature:465867-466214:1:exon
subclass of: SO_0000010

position:465867:1
position: 465867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466214:1
position: 466214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465867-466214:1:exon

HB778_RS39910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39910
old locus tag: HB778_40060
inference: COORDINATES: protein motif:HMM:NF022540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exopolysaccharide production repressor protein
translation: MGQTRRTALPFRIFCAVFVLVLCSNALAVYFASHSIRLVVVTTLACSLLLQVGYFASVLFLIWRSGCASRAGQRAEHFGSCKEVRCQPTDHDEVRNESSDVPQLGPAFPCPGEAS
SIO_010081: HB778_RS39910
subclass of: SO_0000673
so part of: HB778_RS39910
location: 465867..466214
location: region:465867-466214:1
so has part: feature:465867-466214:1:exon

WP_244662134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465867-466214:1:exon

HB778_RS39915
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: istB
locus tag: HB778_RS39915
old locus tag: HB778_40065
so part of: sequence
location: complement(466488..467240)
location: region:466488-467240:-1
so has part: feature:466488-467240:-1:exon
subclass of: SO_0000010

position:466488:-1
position: 466488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467240:-1
position: 467240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466488-467240:-1:exon

HB778_RS39915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: istB
locus tag: HB778_RS39915
old locus tag: HB778_40065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012275085.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MLAHPTHERLIALGLAGMAKAFEEQRSSPDLSALTFEERIGIMADREAAERDTKRMTARLKFAALRQNACVEDIDLRIPRGIDRALLARLVAGDWISRHNNLAITGPCGVGKSWLACALGHKACRDGRSVSYQRVPRLFEAMALARGDGRHARMLKSLARVELLILDDWGISVLTQSQRIDLLEMLEDRNGRASTIVTSQVPVDQWHEVIGDDPTLADAILDRLVHNAHRINMTGESLRKIAGKQALDAD
SIO_010081: HB778_RS39915
subclass of: SO_0000673
so part of: HB778_RS39915
location: complement(466488..467240)
location: region:466488-467240:-1
so has part: feature:466488-467240:-1:exon

WP_183465635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466488-467240:-1:exon

HB778_RS39920
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39920
old locus tag: HB778_40070
pseudo: true
so part of: sequence
location: complement(467263..>468177)
location: region:467263-468177:-1
so has part: feature:467263-468177:-1:exon
subclass of: SO_0000010

position:467263:-1
position: 467263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468177:-1
position: 468177
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467263-468177:-1:exon

HB778_RS39920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39920
old locus tag: HB778_40070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011090936.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: HB778_RS39920
subclass of: SO_0000673
so part of: HB778_RS39920
location: complement(467263..>468177)
location: region:467263-468177:-1
so has part: feature:467263-468177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:467263-468177:-1:exon

HB778_RS42550
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42550
so part of: sequence
location: 468309..468620
location: region:468309-468620:1
so has part: feature:468309-468620:1:exon
subclass of: SO_0000010

position:468309:1
position: 468309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468620:1
position: 468620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468309-468620:1:exon

HB778_RS42550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLEKYYIRPATIDRIQGSWIASTVEQYGGWMAERRYTDRSVSRRIPIVVSFGEFAKAQGASERTYLITSSHSCKRGLVSMLDDARAGDASRSAMNYAIPSARC
SIO_010081: HB778_RS42550
subclass of: SO_0000673
so part of: HB778_RS42550
location: 468309..468620
location: region:468309-468620:1
so has part: feature:468309-468620:1:exon

WP_244662135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468309-468620:1:exon

HB778_RS42555
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42555
pseudo: true
so part of: sequence
location: 468614..>468799
location: region:468614-468799:1
so has part: feature:468614-468799:1:exon
subclass of: SO_0000010

position:468614:1
position: 468614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468799:1
position: 468799
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468614-468799:1:exon

HB778_RS42555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42555
inference: COORDINATES: protein motif:HMM:NF014898.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase
SIO_010081: HB778_RS42555
subclass of: SO_0000673
so part of: HB778_RS42555
location: 468614..>468799
location: region:468614-468799:1
so has part: feature:468614-468799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:468614-468799:1:exon

HB778_RS42560
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42560
so part of: sequence
location: 468901..469374
location: region:468901-469374:1
so has part: feature:468901-469374:1:exon
subclass of: SO_0000010

position:468901:1
position: 468901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469374:1
position: 469374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468901-469374:1:exon

HB778_RS42560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MLRVFLRYLHRQGVLAKDLGSLVEFPQSYRHAGVPRSISWEQVEQVLAGIDRRSTSGKRDYAMMMLLATYGLRAAEVATLTLDDIDWRNERLKIRDRKAGNTTTYPLSAAVGAAIIEYLKNGRPATNCRYALLCSTCPDRLRGGCLSRRSFHPQSRH
SIO_010081: HB778_RS42560
subclass of: SO_0000673
so part of: HB778_RS42560
location: 468901..469374
location: region:468901-469374:1
so has part: feature:468901-469374:1:exon

WP_244662218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468901-469374:1:exon

HB778_RS39930
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39930
old locus tag: HB778_40080
so part of: sequence
location: 469545..470219
location: region:469545-470219:1
so has part: feature:469545-470219:1:exon
subclass of: SO_0000010

position:469545:1
position: 469545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470219:1
position: 470219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469545-470219:1:exon

HB778_RS39930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39930
old locus tag: HB778_40080
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MGRTCCGHDGRFQSFLRHEIEQFLGHKRSLRRRSDVEEKTLALFDAYLSKNNIGSLAEITPALVDEFLLSRPRSRPRSYNHLRCTVGRLFSYLVDHEKLAQTPLRSPPRRGRYQRTPFIFDTDAATRLLALAKALPSHGSTIERDNTYFVLFAVLYGLGLRVGEACRLCLKDVDLKRRLLVIRETKFYKSRLVPFGPKLGALLGLVGTLMFKCKRYGHDCSSRQ
SIO_010081: HB778_RS39930
subclass of: SO_0000673
so part of: HB778_RS39930
location: 469545..470219
location: region:469545-470219:1
so has part: feature:469545-470219:1:exon

WP_183465636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469545-470219:1:exon

HB778_RS39935
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39935
old locus tag: HB778_40085
pseudo: true
so part of: sequence
location: complement(470484..471600)
location: region:470484-471600:-1
so has part: feature:470484-471600:-1:exon
subclass of: SO_0000010

position:470484:-1
position: 470484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471600:-1
position: 471600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470484-471600:-1:exon

HB778_RS39935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39935
old locus tag: HB778_40085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017270533.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: HB778_RS39935
subclass of: SO_0000673
so part of: HB778_RS39935
location: complement(470484..471600)
location: region:470484-471600:-1
so has part: feature:470484-471600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470484-471600:-1:exon

HB778_RS39940
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39940
old locus tag: HB778_40090
pseudo: true
so part of: sequence
location: <471706..472791
location: region:471706-472791:1
so has part: feature:471706-472791:1:exon
subclass of: SO_0000010

position:471706:1
position: 471706
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:472791:1
position: 472791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471706-472791:1:exon

HB778_RS39940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39940
old locus tag: HB778_40090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612021.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: HB778_RS39940
subclass of: SO_0000673
so part of: HB778_RS39940
location: <471706..472791
location: region:471706-472791:1
so has part: feature:471706-472791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471706-472791:1:exon

HB778_RS39945
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39945
old locus tag: HB778_40095
pseudo: true
so part of: sequence
location: <473097..473642
location: region:473097-473642:1
so has part: feature:473097-473642:1:exon
subclass of: SO_0000010

position:473097:1
position: 473097
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:473642:1
position: 473642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473097-473642:1:exon

HB778_RS39945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39945
old locus tag: HB778_40095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020817899.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: HB778_RS39945
subclass of: SO_0000673
so part of: HB778_RS39945
location: <473097..473642
location: region:473097-473642:1
so has part: feature:473097-473642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473097-473642:1:exon

HB778_RS39950
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39950
old locus tag: HB778_40100
so part of: sequence
location: complement(474035..475072)
location: region:474035-475072:-1
so has part: feature:474035-475072:-1:exon
subclass of: SO_0000010

position:474035:-1
position: 474035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475072:-1
position: 475072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474035-475072:-1:exon

HB778_RS39950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39950
old locus tag: HB778_40100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976683.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MKYFAGLDVSLEETAICVVDEAGRIVKETRAASEPQALIEALRKVDLPLERIGLEACSLTAWLHDGMCADGLPAICIETRQANAAMKMMPNKTDRNDARALAQIMRTGWYRQVHVKSRQCRLWRSLLVARRTVLNETRTIENVVRAILREAGIKLGTPSRTAFASRVRELAGTDPVVMPLVEPLLTILATMLGEFARLTKQVLGLVRQEEVCRRLMSVPGVGPITALAFRATIDQPDRFRRSRDVGAHLGLTPARYQSGETDIQGKVSRCGDELARTALYEAAHSLLVLSKKWSSLRAWGMNVAKRRGMARARVAVARKLAVILHRMWSDATEFRFGKAPGRVSA
SIO_010081: HB778_RS39950
subclass of: SO_0000673
so part of: HB778_RS39950
location: complement(474035..475072)
location: region:474035-475072:-1
so has part: feature:474035-475072:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:474035-475072:-1:exon

HB778_RS39955
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39955
old locus tag: HB778_40105
so part of: sequence
location: complement(475118..476356)
location: region:475118-476356:-1
so has part: feature:475118-476356:-1:exon
subclass of: SO_0000010

position:475118:-1
position: 475118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476356:-1
position: 476356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475118-476356:-1:exon

HB778_RS39955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39955
old locus tag: HB778_40105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612055.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MTDDMMKLRTLVEKTPDADILREMIGFAAERLMELEVGAATGAGYGEKNPLRTAQRNGYRERDWETRAGTVELRIPKLRKGSYFPGFLEPRRMAEKALTAVIQEAYVQGISTRSVDDLVKAMGMSGISKSQVSRLCEEIDGKVKAFLERPIEGDWPYLWIDATYLKVRRGGRIVSVAVIIAVGVNADGRREVLGMEVGTSEAEPIWTEFLRKLTRRGLRGVKLVVSDAHEGIKAAVTKVLCATWQRCRVHFMRNVLAHAGKSGRRVVSAFIATAFAQETPEAASTQWRAVADQIRPKVPKLATIMDDAEPDVLAYMTFPREHRAKLHSTNPIERLNGEIKRRTEVVGIFPNDDAIVRLVGALLLEQNDEWAVQRARYMTLETISQMSDDPLIRWGDWGLARARLRAAAPVEM
SIO_010081: HB778_RS39955
subclass of: SO_0000673
so part of: HB778_RS39955
location: complement(475118..476356)
location: region:475118-476356:-1
so has part: feature:475118-476356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475118-476356:-1:exon

HB778_RS39960
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39960
old locus tag: HB778_40110
so part of: sequence
location: complement(476489..477313)
location: region:476489-477313:-1
so has part: feature:476489-477313:-1:exon
subclass of: SO_0000010

position:476489:-1
position: 476489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477313:-1
position: 477313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476489-477313:-1:exon

HB778_RS39960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39960
old locus tag: HB778_40110
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTLSLGTLVQSFFADHLPVQKGLGLGSIRSYRDTIRLFLCFVSEQRGGRITALALDDLTFERSLAFLKHLEQERGNSIRTRNQRRAALNTFFAYLAVRAPEMLAVYQQVAAIPVKRTSLPDTHFLEREEVAALFRSLPRQGHLALRDHTLLLFLYNTGARVQEVADLRIEHLELKPPAKVHLHGKGDKWRTCPLWDETVKHIQALLAQRRATPGEPVFCAPKARPLTRFGIYKIVRRHGASFDTRGPKSSESVRIYSGTPLPATGDAVVSPDVV
SIO_010081: HB778_RS39960
subclass of: SO_0000673
so part of: HB778_RS39960
location: complement(476489..477313)
location: region:476489-477313:-1
so has part: feature:476489-477313:-1:exon

WP_244662136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476489-477313:-1:exon

HB778_RS39965
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39965
old locus tag: HB778_40115
pseudo: true
so part of: sequence
location: complement(477627..478621)
location: region:477627-478621:-1
so has part: feature:477627-478621:-1:exon
subclass of: SO_0000010

position:477627:-1
position: 477627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478621:-1
position: 478621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477627-478621:-1:exon

HB778_RS39965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39965
old locus tag: HB778_40115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007425104.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: HB778_RS39965
subclass of: SO_0000673
so part of: HB778_RS39965
location: complement(477627..478621)
location: region:477627-478621:-1
so has part: feature:477627-478621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477627-478621:-1:exon

HB778_RS39970
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39970
old locus tag: HB778_40120
so part of: sequence
location: complement(478618..479556)
location: region:478618-479556:-1
so has part: feature:478618-479556:-1:exon
subclass of: SO_0000010

position:478618:-1
position: 478618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479556:-1
position: 479556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478618-479556:-1:exon

HB778_RS39970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39970
old locus tag: HB778_40120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913647.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSALQAALEEYLAARRALGHKLRLSGRLLQRFVVFAESSGATFITTEIALAWAMQPAEAQPAQWANRLAMVRRFARYCSAIDLRTVVPPPDLLPHRYRRSSSPYVYRDEEITRLIDAAKRLPSTVGLRPQTYATLFGLYAATGMRCNEPLRLDRGDTDLVDGVLTVRDTKFGKSRYVPLHPSTQHALKIYAASRDRSCPNPLSSSFFLSERGTRLTEWAVRWTFVKLSREVGLRGSKDSHGPRLHDLRHRLAVTTLLRWYRNGIDVERHLPELATYLGHAHVTDTYWYLTATPELLQQALLRAEQSQPESRP
SIO_010081: HB778_RS39970
subclass of: SO_0000673
so part of: HB778_RS39970
location: complement(478618..479556)
location: region:478618-479556:-1
so has part: feature:478618-479556:-1:exon

WP_183465638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478618-479556:-1:exon

HB778_RS39975
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39975
old locus tag: HB778_40125
so part of: sequence
location: complement(479553..480776)
location: region:479553-480776:-1
so has part: feature:479553-480776:-1:exon
subclass of: SO_0000010

position:479553:-1
position: 479553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480776:-1
position: 480776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479553-480776:-1:exon

HB778_RS39975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39975
old locus tag: HB778_40125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913648.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MIDLNKALAKDRWIGRLASHLDGFEALLDGQGYAKTTVQQKIKLLAGFSAWVERQNVPLSLLGEEDADRFLTELGLRPRRGDAWTIRQLLRYLRDTGGVPVLLPEVDTSAKGKLIDAFGEFLRKERGLSASTLTNYLPIVRGFLDEQFGGNDPDFDRLRVGDVHRFIVRRAQAGSPGRAKLVVTALRSFLRFLQQRGLLATDLAVAVPGIAGWRLAHLPKALPAEQVERLLASCDRRTPAGRRDYAVLMLLARLGLRGGEVSALTLDDLDWDCGEIVVHGKGQRLARLPLPADVGAALVDYLRQDRPACSTRRVFIRIKAPRRSFVSPSTICCIVHRALKRAGLTPAFQGAHLLRHSLATDLLRRSASLVEIGQLLRHSQPNTRQIYAKVDIAALRAIALPWPGVSS
SIO_010081: HB778_RS39975
subclass of: SO_0000673
so part of: HB778_RS39975
location: complement(479553..480776)
location: region:479553-480776:-1
so has part: feature:479553-480776:-1:exon

WP_183465639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479553-480776:-1:exon

HB778_RS39980
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39980
old locus tag: HB778_40130
pseudo: true
so part of: sequence
location: complement(<481126..481765)
location: region:481126-481765:-1
so has part: feature:481126-481765:-1:exon
subclass of: SO_0000010

position:481126:-1
position: 481126
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:481765:-1
position: 481765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481126-481765:-1:exon

HB778_RS39980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39980
old locus tag: HB778_40130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_044551230.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: HB778_RS39980
subclass of: SO_0000673
so part of: HB778_RS39980
location: complement(<481126..481765)
location: region:481126-481765:-1
so has part: feature:481126-481765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481126-481765:-1:exon

HB778_RS39985
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39985
old locus tag: HB778_40135
so part of: sequence
location: 482402..483604
location: region:482402-483604:1
so has part: feature:482402-483604:1:exon
subclass of: SO_0000010

position:482402:1
position: 482402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483604:1
position: 483604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482402-483604:1:exon

HB778_RS39985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39985
old locus tag: HB778_40135
inference: COORDINATES: protein motif:HMM:NF012706.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MNSRAFAARSCGDNIVRFGTTSAPDTMNPFASWNSFWPWVFAYDWFVCVDAQRHPDRKGFAKDWSVAADNVTWTFKVWPGMKWSDGQPATARDAAFTYNYLRGSMGTPNELNVGYNNITGLENVESIAVLDDETLQIVTKTPTRWPIDNSTMIVPEHIWKDISYADARGAFRNDPPLVGTGPMIVSEFQQDQFVRLTPNPYFRNGQPAIVGAILQIFKTSDALGAGLKSGSLDYAANLTTAQWIDLSKNPDIVVGQQRIEQRDFLAFNTAFGKGAGSTKALQDPKFRDAIGYAIDQKAIVDRAMHGQAEPGVGPIPPLLAEYYSDLSDIRRHFDLAEAGRRLDAAGYRDTDGDGVREDKEGKSVQLELVASANSGGTCRYRSRPSSSLPVGSNRSGFPCP
SIO_010081: HB778_RS39985
subclass of: SO_0000673
so part of: HB778_RS39985
location: 482402..483604
location: region:482402-483604:1
so has part: feature:482402-483604:1:exon

WP_244662137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482402-483604:1:exon

HB778_RS42565
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42565
so part of: sequence
location: 483601..484005
location: region:483601-484005:1
so has part: feature:483601-484005:1:exon
subclass of: SO_0000010

position:483601:1
position: 483601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484005:1
position: 484005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483601-484005:1:exon

HB778_RS42565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTELDFGSLQARTSAPEKGGGGWDLLIANRWPFAAPFYLLDIGDGKSIGLSNKSYWTNSKFDELLSEIKGTVDLKKSQKLVDQAARLIYTEAPYIILSYPYLVDARRKDCFKGWGTQDIVSMNGYFPMDRLEPM
SIO_010081: HB778_RS42565
subclass of: SO_0000673
so part of: HB778_RS42565
location: 483601..484005
location: region:483601-484005:1
so has part: feature:483601-484005:1:exon

WP_244662138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483601-484005:1:exon

HB778_RS39990
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39990
old locus tag: HB778_40140
so part of: sequence
location: 484085..485011
location: region:484085-485011:1
so has part: feature:484085-485011:1:exon
subclass of: SO_0000010

position:484085:1
position: 484085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485011:1
position: 485011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484085-485011:1:exon

HB778_RS39990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39990
old locus tag: HB778_40140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240950.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MVAVVNFTLFRIIPGDPASLLLAGARGSMTSEQLEVQRQNWGLDKPLFPDQILAYMSTTLQGDLGYSFKFRGRRVADLICERLPATVVLIGLAQLIAIVFGVVLGIYAGWRRGGAIDHVSTATSLALYSTPPFWLGMILVMIFSTGLGWLPGYGAYSPSFASVGLVDWIADRISHLVLPASTLALGLIGQYVLVARAAMSDVVTEDYMVTARAKGLTGRQMLMRHAFRNSMLPVVTLIALNLGYVVAGAITVESVFAWPGIGGLTVDALNARDYPTLQGIFLLLGVSIVGVNLLADITYGFLDPRVRQ
SIO_010081: HB778_RS39990
subclass of: SO_0000673
so part of: HB778_RS39990
location: 484085..485011
location: region:484085-485011:1
so has part: feature:484085-485011:1:exon

WP_244662139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484085-485011:1:exon

HB778_RS39995
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS39995
old locus tag: HB778_40145
so part of: sequence
location: 485008..485940
location: region:485008-485940:1
so has part: feature:485008-485940:1:exon
subclass of: SO_0000010

position:485008:1
position: 485008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485940:1
position: 485940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485008-485940:1:exon

HB778_RS39995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS39995
old locus tag: HB778_40145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913752.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MNESSAASRWRVRARAINAFLSQFLHHGGAQLGLFFMVIFLVLAAAPDTLVGPLETVATATGDFLSPPQRQHVLGTDEVGRDVLNLVVHGARISLTIAFLATVISLIVGTTVGMTSGYYGGKVDVWLMRLTDFFFVLPSFVLALVITPVVLEVIGRGRDILGFRPSLFVIILVIGLTSWAFVARIVRSQTLSLRERQFVERARVVGTNDLNIMLRHILPNLVPQVAANSALVVAGAIYTETALSFLGLGDPLQPSWGTLLSLAQRAGAASSGAWWYLGAPGVCVLTVSLGFVLIGNALDDTFNPRRRAIP
SIO_010081: HB778_RS39995
subclass of: SO_0000673
so part of: HB778_RS39995
location: 485008..485940
location: region:485008-485940:1
so has part: feature:485008-485940:1:exon

WP_183465641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485008-485940:1:exon

HB778_RS40000
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40000
old locus tag: HB778_40150
pseudo: true
so part of: sequence
location: 485937..486940
location: region:485937-486940:1
so has part: feature:485937-486940:1:exon
subclass of: SO_0000010

position:485937:1
position: 485937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486940:1
position: 486940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485937-486940:1:exon

HB778_RS40000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40000
old locus tag: HB778_40150
inference: COORDINATES: protein motif:HMM:TIGR01727.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
SIO_010081: HB778_RS40000
subclass of: SO_0000673
so part of: HB778_RS40000
location: 485937..486940
location: region:485937-486940:1
so has part: feature:485937-486940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:485937-486940:1:exon

HB778_RS40005
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40005
old locus tag: HB778_40155
so part of: sequence
location: 486940..487941
location: region:486940-487941:1
so has part: feature:486940-487941:1:exon
subclass of: SO_0000010

position:487941:1
position: 487941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486940-487941:1:exon

HB778_RS40005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40005
old locus tag: HB778_40155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006326811.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPETTAILHLENLQVHFQMHGGFLDRVLGRPQGAVRAVDGIDLTVGHGEIVALVGESGSGKTTVGRVITKLVQPTGGKLLFEGDDMTSVRGSYALRRYRRRVQMIFQDAYQALNPRQTVFDIVAEPLRSLRLVKDNSQLSERVQQALSAAGLNPPDEYVARFPHELSGGQRQRVVIAGALSVKPDLIVADEPVSMLDVSIRAQILQVLVELRQQQNMALLFITHDLAVAWLIADRIAVLYLGRLVEIGSADDITLNPRHPYTRALRSATPQIGSEIDRGEQLVLQGEVPSAARVPNGCRFHPRCPLAFDRCREEEPPAIEVGPQHMSACWLAK
SIO_010081: HB778_RS40005
subclass of: SO_0000673
so part of: HB778_RS40005
location: 486940..487941
location: region:486940-487941:1
so has part: feature:486940-487941:1:exon

WP_183465642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486940-487941:1:exon

HB778_RS40010
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40010
old locus tag: HB778_40160
so part of: sequence
location: complement(488425..490101)
location: region:488425-490101:-1
so has part: feature:488425-490101:-1:exon
subclass of: SO_0000010

position:488425:-1
position: 488425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490101:-1
position: 490101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488425-490101:-1:exon

HB778_RS40010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40010
old locus tag: HB778_40160
inference: COORDINATES: protein motif:HMM:TIGR00976.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CocE/NonD family hydrolase
translation: MTDGVGLYADIYRPRGAGERLPTILIRTPYSKAPYRDGRDSNMKNGIAFMFAGQGFIVVVQDVRGRFRSEGSRGAASEAGDGYDTVSWIAAQSWSNGKVGGYGCSSLGISQVLMASRQPPALLAILPQAAGGAMRNRAGDVIVSGVPEIGWAFEWFRNHGNQGSQTPEKIDYQEMLRSLPVADMNERSAGFPNDWRDWVIHEPSDPWWDQFALFDESSRPNVPALFVDSWYNVSVNETLDLFNAFQKQSTTEQVRRNQYMIISPTGHCQSESTQTPFIIGERDVGDIRQDYWSIYLRWFDHWLRDGQGDFEMPHIQYYLMGANRWKSGDSWPLPETRFVPYYFRSGGKANTSNGDGILSMAMATGPADHYRYDPADPTPSPESIRGRADGSAADQREVDLRPDRLVFQTEPLSSGMEVTGPLRAVLYVSSSARDTDFIVMLSDVYPDGRAYNLQKGIARARYREAYTAQASYLEDYRDPSLLTPGKIYRIEVNMQATGNWFGPGHRIRVQVASSCFPHYARNLNTGGDNATESATAIAENTLYHDRNYPSHIILPVVP
SIO_010081: HB778_RS40010
subclass of: SO_0000673
so part of: HB778_RS40010
location: complement(488425..490101)
location: region:488425-490101:-1
so has part: feature:488425-490101:-1:exon

WP_244662140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488425-490101:-1:exon

HB778_RS40015
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: istA
locus tag: HB778_RS40015
old locus tag: HB778_40165
so part of: sequence
location: 491595..493103
location: region:491595-493103:1
so has part: feature:491595-493103:1:exon
subclass of: SO_0000010

position:491595:1
position: 491595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493103:1
position: 493103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491595-493103:1:exon

HB778_RS40015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: istA
locus tag: HB778_RS40015
old locus tag: HB778_40165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488953.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MSGSHITDQQSRLYMQNRQKHSVPVAAAKSGFSPSTGYRIESDPRPPSEKKAKHERRRPDPLEGIFTEEVVPMLQSAPGLRPVGILRELCKRHPELDSGIRRTLERRIRAWRAIHGGDQDVIFRQVHEPGRMGLSDFTHALGLKVTIASVTFDYLLYHFRLAYSGFEHAEIVEGGESFAALTSGLQNALWSLGGAPRDHRTDSLSAAFRNLNADTAQDMTDRYEALCAHYGMKASRNNRGVAHENGAVEGSHGDLKRELEDALLLRGTRDFADVTSFAAFIDEVVGQRNARRAREIAIERESLLALPRKRQPEGEDEIVYVTSSGGFTLRRVFYTVPSRLIGHRLRARLFKEHIELFLGGTSLMKLPRVRGQLGPTQHVVNYHHVIHSLRQKPGALPRLGYRDQLFPRDAYRNLYNAAMERLPERDACRLTVELLSLAHERNVEAALAHAIQGELDAGTLPTLDGMRARFAPNPACVPQVSVNLGKLVDYDRLIGTRVEVTA
SIO_010081: HB778_RS40015
subclass of: SO_0000673
so part of: HB778_RS40015
location: 491595..493103
location: region:491595-493103:1
so has part: feature:491595-493103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491595-493103:1:exon

HB778_RS40020
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: istB
locus tag: HB778_RS40020
old locus tag: HB778_40170
pseudo: true
so part of: sequence
location: 493100..>493756
location: region:493100-493756:1
so has part: feature:493100-493756:1:exon
subclass of: SO_0000010

position:493100:1
position: 493100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493756:1
position: 493756
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493100-493756:1:exon

HB778_RS40020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: istB
locus tag: HB778_RS40020
old locus tag: HB778_40170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014529334.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISRm9 family helper ATPase IstB
SIO_010081: HB778_RS40020
subclass of: SO_0000673
so part of: HB778_RS40020
location: 493100..>493756
location: region:493100-493756:1
so has part: feature:493100-493756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493100-493756:1:exon

HB778_RS40025
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40025
old locus tag: HB778_40175
so part of: sequence
location: 494236..496341
location: region:494236-496341:1
so has part: feature:494236-496341:1:exon
subclass of: SO_0000010

position:494236:1
position: 494236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496341:1
position: 496341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494236-496341:1:exon

HB778_RS40025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40025
old locus tag: HB778_40175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010913867.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLAIPSSPDERLTAVRRSKFAYVYVRQSSINQVRHHQESTELQYSLVDRAVRLGWPPDRVVVIDEDLGKSGNGQVERGGFQRLIAEIGLGNAGLVVSLDASRLARNNRDWHQLLELCSLFGVVIADGERLYDPCAYHDRLLLGLSGIMSEAELHQIRIRLHQGERQKAARGELRIPLPGGLAYNRSGQIVFNPDEEVQARLRLIFDKFRELQTARRVMRYLRTHDLRVPVRPLRGPAPHELLWRDATIAHVHHILHNPAYAGAYVYGRRRINAVRQGPGSHRATSKVAIDDWDICIKDAHPGYINWEEFMANQRRLADNTNLYEAGHRGAPRRGIALLQGLAVCGQCGRRMTVRYSGPDSACPVYCCLADRNQTGSSLCQEVRAPAVDELVAQTLLKALEPDQIAIAIAALDEIAEETRSLEKQWALRRERARYDAERARRQYDTVEPENRLVARTLEKAWEDKLRLIDEIEQEYRRWRDREPLVLQAQDHAALQELAENLPAIWHSETTQPEDRKRILRFIVQEVVLDQKKIRGQVAIRILWQTGATSDHQIQRRVQSYDRDYGELELVRERITQLNAAGDMDRKIAKILNDEGVRSARGKLFSYENIWLLRHRWGIPTAKINGVAANPPRWPDGTYSVQGAAAAIGVTAQTIFDYLAQGLVHGRQSTKGQPWQISLSSDQIDQLQRRLQRTRRSRKGAS
SIO_010081: HB778_RS40025
subclass of: SO_0000673
so part of: HB778_RS40025
location: 494236..496341
location: region:494236-496341:1
so has part: feature:494236-496341:1:exon

WP_183465644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494236-496341:1:exon

HB778_RS40030
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40030
old locus tag: HB778_40180
pseudo: true
so part of: sequence
location: <496352..496510
location: region:496352-496510:1
so has part: feature:496352-496510:1:exon
subclass of: SO_0000010

position:496352:1
position: 496352
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:496510:1
position: 496510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496352-496510:1:exon

HB778_RS40030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40030
old locus tag: HB778_40180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014529334.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: HB778_RS40030
subclass of: SO_0000673
so part of: HB778_RS40030
location: <496352..496510
location: region:496352-496510:1
so has part: feature:496352-496510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496352-496510:1:exon

HB778_RS40035
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40035
old locus tag: HB778_40185
pseudo: true
so part of: sequence
location: 496802..>497057
location: region:496802-497057:1
so has part: feature:496802-497057:1:exon
subclass of: SO_0000010

position:496802:1
position: 496802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497057:1
position: 497057
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496802-497057:1:exon

HB778_RS40035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40035
old locus tag: HB778_40185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240406.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage integrase N-terminal SAM-like domain-containing protein
SIO_010081: HB778_RS40035
subclass of: SO_0000673
so part of: HB778_RS40035
location: 496802..>497057
location: region:496802-497057:1
so has part: feature:496802-497057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496802-497057:1:exon

HB778_RS42570
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42570
so part of: sequence
location: complement(497517..498152)
location: region:497517-498152:-1
so has part: feature:497517-498152:-1:exon
subclass of: SO_0000010

position:497517:-1
position: 497517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498152:-1
position: 498152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497517-498152:-1:exon

HB778_RS42570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATRSGYARTVRLWKRGADPLTAPMIFETGSETIGVSSHLDRTAESDRLWFIEKPAYFEQIVRIGDRSGPKVEIDLPRDAWWNGFDDWLAVKPRKLWTVGGTTYAADALIGISLSSFMAGERGFVTLFEPGERRSLQSFFWNNGELIISYLVNLVLSRRSRRAGRNGGAEPWTPCPAAGLLTFGHSMRNITRPMERSSFRLIDYAAAAFPT
SIO_010081: HB778_RS42570
subclass of: SO_0000673
so part of: HB778_RS42570
location: complement(497517..498152)
location: region:497517-498152:-1
so has part: feature:497517-498152:-1:exon

WP_244662141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497517-498152:-1:exon

HB778_RS42575
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42575
so part of: sequence
location: complement(498431..498760)
location: region:498431-498760:-1
so has part: feature:498431-498760:-1:exon
subclass of: SO_0000010

position:498431:-1
position: 498431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498760:-1
position: 498760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498431-498760:-1:exon

HB778_RS42575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFLSWGCPDMTAFDFRPTLNAPDDDPCLWLEDVEGERALDWTANQSARTLEHFGGTQFERDRAALTAIFDRPDKIPLIARRGQHLYNFWQDARNPRGLWRAGPPLPPT
SIO_010081: HB778_RS42575
subclass of: SO_0000673
so part of: HB778_RS42575
location: complement(498431..498760)
location: region:498431-498760:-1
so has part: feature:498431-498760:-1:exon

WP_244662142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498431-498760:-1:exon

HB778_RS40050
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40050
old locus tag: HB778_40200
so part of: sequence
location: complement(499439..500263)
location: region:499439-500263:-1
so has part: feature:499439-500263:-1:exon
subclass of: SO_0000010

position:499439:-1
position: 499439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500263:-1
position: 500263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499439-500263:-1:exon

HB778_RS40050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40050
old locus tag: HB778_40200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553437.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MWTEQSRGRMAQIAKKTKRYPSGLTDEEWEQFAPLMPKPGRRGRPREVDFREVVNAVRYLVRSGCGWRMLPIHFGPWQTVYGWFRELARRFLFQTIHDVALMLDRERAGREASPTAGVIDSQSIKAPQAETRGYDAGKKIVGRKRHIAVDTDGRLLMVNLTTADISDSAGAQAILDGIRKRWPWVKHLFADGAYDRLKLMDKAAYLDFVVEIIRRSDDQKGFEVLPRRWVVERTFGWMTRWRRLVRDYEQRIDVSHAMILVAMGGNLIRRNAHP
SIO_010081: HB778_RS40050
subclass of: SO_0000673
so part of: HB778_RS40050
location: complement(499439..500263)
location: region:499439-500263:-1
so has part: feature:499439-500263:-1:exon

WP_183465646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499439-500263:-1:exon

HB778_RS43020
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS43020
old locus tag: HB778_40205
so part of: sequence
location: 500926..501408
location: region:500926-501408:1
so has part: feature:500926-501408:1:exon
subclass of: SO_0000010

position:500926:1
position: 500926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501408:1
position: 501408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500926-501408:1:exon

HB778_RS43020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS43020
old locus tag: HB778_40205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGGGNVRAEWNMRRQSPTVSSGISDGIKKRRIDSAPRGEELVVEELLSDDATVASENIAGMSDRSRRLFDGMIASAPSVSGACPSPHEQIRGDNSCAQSDATLGCYLSVAAEIPHSDRTRALVTEFPTDRIPTETDGPVTQVDGRPSERADGNNCRRRDC
SIO_010081: HB778_RS43020
subclass of: SO_0000673
so part of: HB778_RS43020
location: 500926..501408
location: region:500926-501408:1
so has part: feature:500926-501408:1:exon

WP_183465933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500926-501408:1:exon

HB778_RS40060
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40060
old locus tag: HB778_40210
pseudo: true
so part of: sequence
location: <501582..>501698
location: region:501582-501698:1
so has part: feature:501582-501698:1:exon
subclass of: SO_0000010

position:501582:1
position: 501582
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:501698:1
position: 501698
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501582-501698:1:exon

HB778_RS40060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40060
old locus tag: HB778_40210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018855502.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin
SIO_010081: HB778_RS40060
subclass of: SO_0000673
so part of: HB778_RS40060
location: <501582..>501698
location: region:501582-501698:1
so has part: feature:501582-501698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501582-501698:1:exon

HB778_RS40065
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40065
old locus tag: HB778_40215
so part of: sequence
location: complement(501800..502000)
location: region:501800-502000:-1
so has part: feature:501800-502000:-1:exon
subclass of: SO_0000010

position:501800:-1
position: 501800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502000:-1
position: 502000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501800-502000:-1:exon

HB778_RS40065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40065
old locus tag: HB778_40215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019197494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MERTGVLGDNNVSIGIYAGVLQALGLLEGLSQVADIRNDSVGQALASADLPTHVHLRRPVGSSRDD
SIO_010081: HB778_RS40065
subclass of: SO_0000673
so part of: HB778_RS40065
location: complement(501800..502000)
location: region:501800-502000:-1
so has part: feature:501800-502000:-1:exon

WP_244662208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501800-502000:-1:exon

HB778_RS42585
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42585
pseudo: true
so part of: sequence
location: <501974..502184
location: region:501974-502184:1
so has part: feature:501974-502184:1:exon
subclass of: SO_0000010

position:501974:1
position: 501974
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:502184:1
position: 502184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501974-502184:1:exon

HB778_RS42585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018855502.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin
SIO_010081: HB778_RS42585
subclass of: SO_0000673
so part of: HB778_RS42585
location: <501974..502184
location: region:501974-502184:1
so has part: feature:501974-502184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501974-502184:1:exon

HB778_RS40070
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40070
old locus tag: HB778_40220
so part of: sequence
location: complement(502417..502668)
location: region:502417-502668:-1
so has part: feature:502417-502668:-1:exon
subclass of: SO_0000010

position:502417:-1
position: 502417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502668:-1
position: 502668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502417-502668:-1:exon

HB778_RS40070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40070
old locus tag: HB778_40220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNAEPLGKLGLGGQKPSKDDILKILDAKGAAQAVQALLETRRRWRGWSFPIGVGEVRLSVFSERCRPVGNSLLFAVCTEPAA
SIO_010081: HB778_RS40070
subclass of: SO_0000673
so part of: HB778_RS40070
location: complement(502417..502668)
location: region:502417-502668:-1
so has part: feature:502417-502668:-1:exon

WP_183465647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502417-502668:-1:exon

HB778_RS40075
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40075
old locus tag: HB778_40225
pseudo: true
so part of: sequence
location: complement(503461..504935)
location: region:503461-504935:-1
so has part: feature:503461-504935:-1:exon
subclass of: SO_0000010

position:503461:-1
position: 503461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504935:-1
position: 504935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503461-504935:-1:exon

HB778_RS40075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40075
old locus tag: HB778_40225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533394.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD-dependent succinate-semialdehyde dehydrogenase
SIO_010081: HB778_RS40075
subclass of: SO_0000673
so part of: HB778_RS40075
location: complement(503461..504935)
location: region:503461-504935:-1
so has part: feature:503461-504935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:503461-504935:-1:exon

HB778_RS40080
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40080
old locus tag: HB778_40230
pseudo: true
so part of: sequence
location: complement(505397..506792)
location: region:505397-506792:-1
so has part: feature:505397-506792:-1:exon
subclass of: SO_0000010

position:505397:-1
position: 505397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506792:-1
position: 506792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505397-506792:-1:exon

HB778_RS40080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40080
old locus tag: HB778_40230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006199617.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pitrilysin family protein
SIO_010081: HB778_RS40080
subclass of: SO_0000673
so part of: HB778_RS40080
location: complement(505397..506792)
location: region:505397-506792:-1
so has part: feature:505397-506792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505397-506792:-1:exon

HB778_RS40085
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40085
old locus tag: HB778_40235
so part of: sequence
location: complement(506800..508098)
location: region:506800-508098:-1
so has part: feature:506800-508098:-1:exon
subclass of: SO_0000010

position:506800:-1
position: 506800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508098:-1
position: 508098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506800-508098:-1:exon

HB778_RS40085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40085
old locus tag: HB778_40235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006199618.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MTAPALAATDDGKVTDFLLDNGMEVVVVPDHRAPIVTHMVWYKVGSADEPSGKSGIAHFFEHLMFKATANHVAGELNRAVAEIGGSHNAFTSYDYTAFYQRVAPSALEQMMGFEADRMRNLILTDDVIKTERDVILEERRWRIETNPQAVLDEEVDATLWQNHPYRISIIGWMQEMEQLNRVDAAAFYNKYYNPNNAVVVVAGDVDPETVKALTEKTYGKLSRGPEQQPRVRPVEPEQNTKRTVTLTDARVSVPRFSTQWVVPSYHTAEPGEAEALDLLAEILGGGSRSRLYQQLVVKQGIATEASANFQGTMLDATNFGIYGSPRGGARLADLEAAADAEVARIAKDGVTDEELEKAKDRYVRSVIFAQDEQDYLANMYGSTLATGGTVKDVQEWPDRIRKVTADQVKAVAARYLVSDHSTTGYLLPKTEN
SIO_010081: HB778_RS40085
subclass of: SO_0000673
so part of: HB778_RS40085
location: complement(506800..508098)
location: region:506800-508098:-1
so has part: feature:506800-508098:-1:exon

WP_183465648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506800-508098:-1:exon

HB778_RS40090
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40090
old locus tag: HB778_40240
pseudo: true
so part of: sequence
location: complement(509426..>509965)
location: region:509426-509965:-1
so has part: feature:509426-509965:-1:exon
subclass of: SO_0000010

position:509426:-1
position: 509426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509965:-1
position: 509965
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509426-509965:-1:exon

HB778_RS40090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40090
old locus tag: HB778_40240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016842018.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AMP-binding protein
SIO_010081: HB778_RS40090
subclass of: SO_0000673
so part of: HB778_RS40090
location: complement(509426..>509965)
location: region:509426-509965:-1
so has part: feature:509426-509965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509426-509965:-1:exon

HB778_RS43025
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS43025
old locus tag: HB778_40245
pseudo: true
so part of: sequence
location: complement(<509965..510553)
location: region:509965-510553:-1
so has part: feature:509965-510553:-1:exon
subclass of: SO_0000010

position:510553:-1
position: 510553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509965-510553:-1:exon

HB778_RS43025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS43025
old locus tag: HB778_40245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016842008.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: biotin carboxylase N-terminal domain-containing protein
SIO_010081: HB778_RS43025
subclass of: SO_0000673
so part of: HB778_RS43025
location: complement(<509965..510553)
location: region:509965-510553:-1
so has part: feature:509965-510553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509965-510553:-1:exon

HB778_RS40100
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40100
old locus tag: HB778_40250
so part of: sequence
location: complement(511167..511415)
location: region:511167-511415:-1
so has part: feature:511167-511415:-1:exon
subclass of: SO_0000010

position:511167:-1
position: 511167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511415:-1
position: 511415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511167-511415:-1:exon

HB778_RS40100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40100
old locus tag: HB778_40250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDCFKRIEALIDAASADAIDRARVLLDQLDDKSQTIAQAIDDFLLDLMTLVFVIESTQEMFHYPARRLAHLKLTRVRLLLAS
SIO_010081: HB778_RS40100
subclass of: SO_0000673
so part of: HB778_RS40100
location: complement(511167..511415)
location: region:511167-511415:-1
so has part: feature:511167-511415:-1:exon

WP_183455186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511167-511415:-1:exon

HB778_RS40105
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40105
old locus tag: HB778_40255
so part of: sequence
location: 511621..511833
location: region:511621-511833:1
so has part: feature:511621-511833:1:exon
subclass of: SO_0000010

position:511621:1
position: 511621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511833:1
position: 511833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511621-511833:1:exon

HB778_RS40105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40105
old locus tag: HB778_40255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006339568.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MATGTVKWFNSSKGFGFIQPDNGGQDVFVHISAVERAGLSTLTDGQKINYEIEQDRRTGKSSAGSLSKAG
SIO_010081: HB778_RS40105
subclass of: SO_0000673
so part of: HB778_RS40105
location: 511621..511833
location: region:511621-511833:1
so has part: feature:511621-511833:1:exon

WP_120019369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511621-511833:1:exon

HB778_RS40110
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40110
old locus tag: HB778_40260
so part of: sequence
location: complement(512083..512553)
location: region:512083-512553:-1
so has part: feature:512083-512553:-1:exon
subclass of: SO_0000010

position:512083:-1
position: 512083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512553:-1
position: 512553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512083-512553:-1:exon

HB778_RS40110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40110
old locus tag: HB778_40260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533377.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucR family transcriptional regulator
translation: MTEEADKNIDTLIELTADVVSAYVSNNPVPVGDLPALIGQVHAALKGTAGSVSAQEPAVLKPAVPIKKSVTPDYMISLEDGKKFKSLKRHLSTHYGLTPDEYRAKWGLPADYPMVAPNYAAARSALAKTMGLGRKPKEPETPAPAPAKRTRKKVTA
SIO_010081: HB778_RS40110
subclass of: SO_0000673
so part of: HB778_RS40110
location: complement(512083..512553)
location: region:512083-512553:-1
so has part: feature:512083-512553:-1:exon

WP_183465904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512083-512553:-1:exon

HB778_RS40115
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40115
old locus tag: HB778_40265
pseudo: true
so part of: sequence
location: 513144..514198
location: region:513144-514198:1
so has part: feature:513144-514198:1:exon
subclass of: SO_0000010

position:513144:1
position: 513144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514198:1
position: 514198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513144-514198:1:exon

HB778_RS40115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40115
old locus tag: HB778_40265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006199623.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome-c peroxidase
SIO_010081: HB778_RS40115
subclass of: SO_0000673
so part of: HB778_RS40115
location: 513144..514198
location: region:513144-514198:1
so has part: feature:513144-514198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513144-514198:1:exon

HB778_RS40125
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40125
old locus tag: HB778_40275
so part of: sequence
location: 514650..515006
location: region:514650-515006:1
so has part: feature:514650-515006:1:exon
subclass of: SO_0000010

position:514650:1
position: 514650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515006:1
position: 515006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514650-515006:1:exon

HB778_RS40125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40125
old locus tag: HB778_40275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006205134.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEHDPKEELIETIFRNGTITVVGILLAFSLGFVTHWAANPVPWRLYDLFAVVPILVGIALQMRALSKLLDMSSLRRPIYERANRIFMAGLILTACGVGLAILLDVFEMSAKGTLPGG
SIO_010081: HB778_RS40125
subclass of: SO_0000673
so part of: HB778_RS40125
location: 514650..515006
location: region:514650-515006:1
so has part: feature:514650-515006:1:exon

WP_183465651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514650-515006:1:exon

HB778_RS40130
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40130
old locus tag: HB778_40280
so part of: sequence
location: 515387..515560
location: region:515387-515560:1
so has part: feature:515387-515560:1:exon
subclass of: SO_0000010

position:515387:1
position: 515387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515560:1
position: 515560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515387-515560:1:exon

HB778_RS40130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40130
old locus tag: HB778_40280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRAGVRNEARGSGDDPRAVTIIGKRLSPILSTLEKAGRVGLNREGDWAEDRIDRRPI
SIO_010081: HB778_RS40130
subclass of: SO_0000673
so part of: HB778_RS40130
location: 515387..515560
location: region:515387-515560:1
so has part: feature:515387-515560:1:exon

WP_183465652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515387-515560:1:exon

HB778_RS40135
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40135
old locus tag: HB778_40285
so part of: sequence
location: complement(515570..516967)
location: region:515570-516967:-1
so has part: feature:515570-516967:-1:exon
subclass of: SO_0000010

position:515570:-1
position: 515570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516967:-1
position: 516967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515570-516967:-1:exon

HB778_RS40135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40135
old locus tag: HB778_40285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003572577.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MFVGRAQELSRLRKEFSLARPSLLVVYGRRRIGKSALLKEAAKDRPHVLYQATRVTPTLNLEGFKAEIARSLGADPLLDGLGDWLSVLTYLARKAEGTLGLIVVLDEFPYLVEGDQALPSIIQKFWDAVVAAEGKLNLVLCGSMIAQMEDLLAERNPLYGRQTLPLEVKALPLRDAAGFFPDYPAVDRILAYAIFGGIPFYLRLCDPSASLEENVTNLLLADTGALVDEPNVLLQSELRETQRYASILAAIADGCTKLGEIGGRLRDIKDSVSLSPYMKRLERMRLVRTVHSLDANPKSRDTRYFVDDPLVAFWHRFVRPNMSSVMQGFGPEIWRHQVVPRLDEYMGGAFEEICRGHARRHAQEALPSPAQEIGQIWGAEYDIDVAGRLLDGSMLYGECKWRRGMIGADVLATLIERAGRTDYGRGVEDRHFVLYARTGFKAGVQERAKEDGRIVLLTPGTMLAL
SIO_010081: HB778_RS40135
subclass of: SO_0000673
so part of: HB778_RS40135
location: complement(515570..516967)
location: region:515570-516967:-1
so has part: feature:515570-516967:-1:exon

WP_183465653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515570-516967:-1:exon

HB778_RS40140
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40140
old locus tag: HB778_40290
so part of: sequence
location: complement(517146..517784)
location: region:517146-517784:-1
so has part: feature:517146-517784:-1:exon
subclass of: SO_0000010

position:517146:-1
position: 517146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517784:-1
position: 517784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517146-517784:-1:exon

HB778_RS40140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40140
old locus tag: HB778_40290
inference: COORDINATES: protein motif:HMM:TIGR00229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain S-box protein
translation: MDRAKARDLVNMSSVVAKSEEQKDAEAEVEGFQDDLGRSSLPPRQHMVFTDAKEPGNPIIFANDASLGMTGYAREEVRGRHFNFLMANGTDAGALKRIKLEFEANADAGTEILYRSKDGSEFWAGLFASPVPDKSGAIVQYFTSFVDLTRHKEEQAQSKMLIDELNHRVKNTLATVQSIVWQASRANSDPRAIRETVESRLDRPKGDLPFCP
SIO_010081: HB778_RS40140
subclass of: SO_0000673
so part of: HB778_RS40140
location: complement(517146..517784)
location: region:517146-517784:-1
so has part: feature:517146-517784:-1:exon

WP_244662143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517146-517784:-1:exon

HB778_RS40145
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40145
old locus tag: HB778_40295
so part of: sequence
location: complement(517833..518084)
location: region:517833-518084:-1
so has part: feature:517833-518084:-1:exon
subclass of: SO_0000010

position:517833:-1
position: 517833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518084:-1
position: 518084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517833-518084:-1:exon

HB778_RS40145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40145
old locus tag: HB778_40295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHSRPRPERHPCDCGRSQGLRASRQDNGAGKPASIVASTGLGTAIVEALVKQLEANIEVISDKNGTSVSMTRATFTSRVSQAA
SIO_010081: HB778_RS40145
subclass of: SO_0000673
so part of: HB778_RS40145
location: complement(517833..518084)
location: region:517833-518084:-1
so has part: feature:517833-518084:-1:exon

WP_244662144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517833-518084:-1:exon

HB778_RS42600
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42600
pseudo: true
so part of: sequence
location: complement(518259..>518411)
location: region:518259-518411:-1
so has part: feature:518259-518411:-1:exon
subclass of: SO_0000010

position:518259:-1
position: 518259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518411:-1
position: 518411
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518259-518411:-1:exon

HB778_RS42600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003517131.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AAA family ATPase
SIO_010081: HB778_RS42600
subclass of: SO_0000673
so part of: HB778_RS42600
location: complement(518259..>518411)
location: region:518259-518411:-1
so has part: feature:518259-518411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518259-518411:-1:exon

HB778_RS40150
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40150
old locus tag: HB778_40300
so part of: sequence
location: 518817..519902
location: region:518817-519902:1
so has part: feature:518817-519902:1:exon
subclass of: SO_0000010

position:518817:1
position: 518817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519902:1
position: 519902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518817-519902:1:exon

HB778_RS40150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40150
old locus tag: HB778_40300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018098933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase small subunit
translation: MAAAQTLYDVIRRQGITRRGFTKFCSLTAASLGFGPGAATAMAEALETKERVPVIWMHGLECTCCSESFIRSAHPLVKDVVLSMISLDYDDTIMAAAGHQAEAILKETKDKYKGKYILAVEGNPPLNEDGMFCIDGGKPFVEKLKWMAEDAMAIIAWGACASWGCVQAAKPNPTRATAIDKVILDKPIIKVPGCPPIAEVMTGVVTFITTFGALPELDRQGRPKMFYSQRIHDKCYRRPHFDAGQFVEEWDDEGARKGYCLYKMGCKGPTTYNACSTVRWNGGVSFPIQSGHGCIGCSEDGFWDNGSFYDRLTNLHQFGVEANADKVGMTAAGIVGGAIAAHAAVTAFKRVTTKREKADAS
SIO_010081: HB778_RS40150
subclass of: SO_0000673
so part of: HB778_RS40150
location: 518817..519902
location: region:518817-519902:1
so has part: feature:518817-519902:1:exon

WP_183465654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518817-519902:1:exon

HB778_RS40155
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40155
old locus tag: HB778_40305
so part of: sequence
location: 519927..521717
location: region:519927-521717:1
so has part: feature:519927-521717:1:exon
subclass of: SO_0000010

position:519927:1
position: 519927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521717:1
position: 521717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519927-521717:1:exon

HB778_RS40155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40155
old locus tag: HB778_40305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006614184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nickel-dependent hydrogenase large subunit
translation: MTIQTPNGFTLDNSGKRIVVDPVTRIEGHMRVEVNVDENNIIRNAVSTGTMWRGIEVILKNRDPRDAWAFTERICGVCTGTHALTSVRAVENALGITIPDNANSIRNLMQLALQVHDHVVHFYHLHALDWVDVISAISADPKATSALAQSVSDWPLSSPGYFKDIQTRLKKFVESGQLGPFKNGYWGNASYKLPPEANLMAVAHYLEALDFQKEIVKIHTIFGGKNPHPNWLVGGVPCPINIDGTGAVGAINMERLNMVTSIIDQIIEFNDKVYVPDIMAIGSFYKDWLYGGGLSGKNVLAYGDVPEHVNDYSEASLKLPRGAIINGNLAEVLPVDHEDPEQIQEFVTHSWYKYPDETKGLHPWDGVTEPHYELGPNAKGTKTNIEQLDEAAKYSWIKAPRWRGHAMEVGPLARWVVGYAQNKAEFKDPVEKVLKDLGLPVSALFSTLGRTAARALESSWAGHQMRYFRNKLIANMKAGDFSTAHVDKWKPGTWPKEVKGVGFTEAPRGALAHWIKIKDGKIDNYQCVVPTTWNGSPRDPAGNIGAFEASLMDTPMSDPTQPLEILRTIHSFDPCLACSTHVMSPDGQEMAKVQVR
SIO_010081: HB778_RS40155
subclass of: SO_0000673
so part of: HB778_RS40155
location: 519927..521717
location: region:519927-521717:1
so has part: feature:519927-521717:1:exon

WP_183465655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519927-521717:1:exon

HB778_RS40160
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: cybH
locus tag: HB778_RS40160
old locus tag: HB778_40310
so part of: sequence
location: 521730..522449
location: region:521730-522449:1
so has part: feature:521730-522449:1:exon
subclass of: SO_0000010

position:521730:1
position: 521730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522449:1
position: 522449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521730-522449:1:exon

HB778_RS40160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: cybH
locus tag: HB778_RS40160
old locus tag: HB778_40310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517047.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO process: GO:0022904 - respiratory electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ni/Fe-hydrogenase, b-type cytochrome subunit
translation: MTIHETLAAADAHGEKAVERQSIYVYEAPVRIWHWVNAVSILTLALTGYFIGSPLPSVPGEAIANFLMGYIRFIHFAAGQVLAVFLILRVYWAFVGNIHSRQIFYVPFWSGRFWKEWLHEVRWYTFLARQPKYVGHNPLSQFTMFLMFTLPLFFMVITGFALYSEGAGRDGWEYALFGWVFSIWPNSQDIHTFHHLGMWVILAFLMVHIYVAIREDIMSRQSIISSMISGERLFKDVED
SIO_010081: HB778_RS40160
subclass of: SO_0000673
so part of: HB778_RS40160
location: 521730..522449
location: region:521730-522449:1
so has part: feature:521730-522449:1:exon

WP_183465656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521730-522449:1:exon

HB778_RS40165
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40165
old locus tag: HB778_40315
so part of: sequence
location: 522450..523058
location: region:522450-523058:1
so has part: feature:522450-523058:1:exon
subclass of: SO_0000010

position:522450:1
position: 522450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523058:1
position: 523058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522450-523058:1:exon

HB778_RS40165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40165
old locus tag: HB778_40315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004112860.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HyaD/HybD family hydrogenase maturation endopeptidase
translation: MVAPNPLASSPSPRILVLGIGNILWADEGFGVRAVETFHKAYRVPDNVTVLDGGTQGLYLVQFVNEHDRLIVFDAIDYGLEPGTMKIVEDDVVPKFTGAKKMSLHQTGFQEVLSAADLMGHYPDRLVLIGCQPLDLEDWGGPLTTPVKAVIPRAIETAVGILRDWGVVVTARPDGAAVPPLLENDIDFERYERRAESAALRY
SIO_010081: HB778_RS40165
subclass of: SO_0000673
so part of: HB778_RS40165
location: 522450..523058
location: region:522450-523058:1
so has part: feature:522450-523058:1:exon

WP_183465657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522450-523058:1:exon

HB778_RS40170
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40170
old locus tag: HB778_40320
so part of: sequence
location: 523069..523644
location: region:523069-523644:1
so has part: feature:523069-523644:1:exon
subclass of: SO_0000010

position:523069:1
position: 523069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523644:1
position: 523644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523069-523644:1:exon

HB778_RS40170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40170
old locus tag: HB778_40320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018856722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HupE/UreJ family protein
translation: MNFRRFAATLVAMALPCIAHAHVGLHTDGALAGFSHPFSGLDHILAMVAVGFWALTLGGKARWIVPLAFVTVMAVGGALGIYGLAFPMVETGIALTVALLGLLVAFEVKVSTSVAATVVGTCALFHGHAHGTELPAMTHAGGYVAGFIAATVILHLTGFCLALLRFGNAQRVAARTAGLAIALAGAVLLAG
SIO_010081: HB778_RS40170
subclass of: SO_0000673
so part of: HB778_RS40170
location: 523069..523644
location: region:523069-523644:1
so has part: feature:523069-523644:1:exon

WP_183465906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523069-523644:1:exon

HB778_RS40175
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40175
old locus tag: HB778_40325
so part of: sequence
location: 523741..524037
location: region:523741-524037:1
so has part: feature:523741-524037:1:exon
subclass of: SO_0000010

position:523741:1
position: 523741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524037:1
position: 524037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523741-524037:1:exon

HB778_RS40175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40175
old locus tag: HB778_40325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HypC/HybG/HupF family hydrogenase formation chaperone
translation: MCIGIPMRAVAGNEFVAHCERHGRISSISLMLVGPQPPGTYLLTHLGSAIRVLDADEARAIDNALAGLAEAVEGRAFDALFADLTSREPELPPHLRSE
SIO_010081: HB778_RS40175
subclass of: SO_0000673
so part of: HB778_RS40175
location: 523741..524037
location: region:523741-524037:1
so has part: feature:523741-524037:1:exon

WP_095494256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523741-524037:1:exon

HB778_RS40180
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40180
old locus tag: HB778_40330
so part of: sequence
location: 524206..524655
location: region:524206-524655:1
so has part: feature:524206-524655:1:exon
subclass of: SO_0000010

position:524206:1
position: 524206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524655:1
position: 524655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524206-524655:1:exon

HB778_RS40180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40180
old locus tag: HB778_40330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase accessory protein
translation: MPSVLVRALSERARLPLIDETNIDAFLAPAASEPDNAVLFFTGDPSQRPEADDVAVVLPHILQAFQGRLRGAVVLRTAEDKLKARFNVVVMPSLAVTRRDQPVGLLGKIRDWSEYVEKIGAWLAPDAPVMVPLGGPKVEITHAGKKIVR
SIO_010081: HB778_RS40180
subclass of: SO_0000673
so part of: HB778_RS40180
location: 524206..524655
location: region:524206-524655:1
so has part: feature:524206-524655:1:exon

WP_183465658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524206-524655:1:exon

HB778_RS40185
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40185
old locus tag: HB778_40335
so part of: sequence
location: 524652..525500
location: region:524652-525500:1
so has part: feature:524652-525500:1:exon
subclass of: SO_0000010

position:524652:1
position: 524652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525500:1
position: 525500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524652-525500:1:exon

HB778_RS40185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40185
old locus tag: HB778_40335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517052.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase expression/formation protein
translation: MKAGFWVAPGGEDAAMTVMPIGAEPPLRARKLNFLATSSAEEMIRRCRRTAMLLPELADALAVQKADRPGRLFDITDFPDDDKELIAQTLGEGEVAGAAALANGITAQMQEAVMAGVWRVRFTDGEGRLIADYVEVASIPAAVKKACSALPGSISHGPAPTGAMNVMPVLTEIGDRVARYSDGDPGHIITFSLFPMSPEDMAFLQETLGAGPVQLTSRGYGSCRIVVTGARNVWSVQFYNAMDTIILDTLEICDIPSVAIAAEDDFRDSEARLREIEEAYFK
SIO_010081: HB778_RS40185
subclass of: SO_0000673
so part of: HB778_RS40185
location: 524652..525500
location: region:524652-525500:1
so has part: feature:524652-525500:1:exon

WP_183465659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524652-525500:1:exon

HB778_RS40190
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40190
old locus tag: HB778_40340
so part of: sequence
location: 525497..525712
location: region:525497-525712:1
so has part: feature:525497-525712:1:exon
subclass of: SO_0000010

position:525497:1
position: 525497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525712:1
position: 525712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525497-525712:1:exon

HB778_RS40190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40190
old locus tag: HB778_40340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rubredoxin
translation: MSAFENFGKRETVSDDDQMECGICWHVYDPAEGDPVWQIAPGTSFADLPEDWRCPNCDALQSKFMRLGDGR
SIO_010081: HB778_RS40190
subclass of: SO_0000673
so part of: HB778_RS40190
location: 525497..525712
location: region:525497-525712:1
so has part: feature:525497-525712:1:exon

WP_095494259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525497-525712:1:exon

HB778_RS40195
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: hybE
locus tag: HB778_RS40195
old locus tag: HB778_40345
so part of: sequence
location: 525702..526226
location: region:525702-526226:1
so has part: feature:525702-526226:1:exon
subclass of: SO_0000010

position:525702:1
position: 525702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526226:1
position: 526226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525702-526226:1:exon

HB778_RS40195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: hybE
locus tag: HB778_RS40195
old locus tag: HB778_40345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517054.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: [NiFe]-hydrogenase assembly chaperone HybE
translation: MDADVAERAEIDPAQALGRRLEACYRHIYATAMADVPICNPALGIASTGFRTYGGRAFGIVTTPWFMNLVAADLPQGPSSAPAATGTTLRVGLPAGEVGFIAGELDAIDRVDSCSLFSPVFEFATMEAALETADEAARAFFDPATLEPPPAPPAAVNRRDLLRGHVRRREEASQ
SIO_010081: HB778_RS40195
subclass of: SO_0000673
so part of: HB778_RS40195
location: 525702..526226
location: region:525702-526226:1
so has part: feature:525702-526226:1:exon

WP_183465660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525702-526226:1:exon

HB778_RS42605
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42605
so part of: sequence
location: 526223..526765
location: region:526223-526765:1
so has part: feature:526223-526765:1:exon
subclass of: SO_0000010

position:526223:1
position: 526223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526765:1
position: 526765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526223-526765:1:exon

HB778_RS42605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVLLGAGTIRIDVTVSRALACSVTVKANRPQGLTRMFVGRRPEEAPPLAGQVFSLCGFAQSVAARLAVLNAADMAMKEDERIGSGAGLLAERIFETLRALILHWPSPVPASLGATAGRHLREALAASQEIIAAPRPGKSTGRIWRPPLRGCLRRPARSASRARATHLCRNQPAPRCCRI
SIO_010081: HB778_RS42605
subclass of: SO_0000673
so part of: HB778_RS42605
location: 526223..526765
location: region:526223-526765:1
so has part: feature:526223-526765:1:exon

WP_244662145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526223-526765:1:exon

HB778_RS42610
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42610
so part of: sequence
location: 526750..527331
location: region:526750-527331:1
so has part: feature:526750-527331:1:exon
subclass of: SO_0000010

position:526750:1
position: 526750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527331:1
position: 527331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526750-527331:1:exon

HB778_RS42610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42610
inference: COORDINATES: protein motif:HMM:NF012592.2
GO function: GO:0016151 - nickel cation binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nickel-dependent hydrogenase large subunit
translation: MLQDIGNDRVFNGRRPDPLTINDDPEVIARLCAEPGYASLPHLQGRVAETGAYARLAAGDVEASHLVQRLLARINDVRLCLKQLTALAATGKCDGASLACGGATPGAGGYGAVECARGRLYHQAEIGGDGRLSSYRILAPTEWNFHPAGPFVETLLSSSVGTDEAAVRSVSRLAVLFDPCVAFEVSVREAAHA
SIO_010081: HB778_RS42610
subclass of: SO_0000673
so part of: HB778_RS42610
location: 526750..527331
location: region:526750-527331:1
so has part: feature:526750-527331:1:exon

WP_244662146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526750-527331:1:exon

HB778_RS40205
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: hypA
locus tag: HB778_RS40205
old locus tag: HB778_40355
so part of: sequence
location: 527324..527665
location: region:527324-527665:1
so has part: feature:527324-527665:1:exon
subclass of: SO_0000010

position:527324:1
position: 527324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527665:1
position: 527665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527324-527665:1:exon

HB778_RS40205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: hypA
locus tag: HB778_RS40205
old locus tag: HB778_40355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240265.1
GO function: GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase maturation nickel metallochaperone HypA
translation: MHEMSLMESVIEIVCDTARQNGATRVKSVRVDVGVLSHVEPDALMFCYEAVRHGTIADEATLEINRIAGEGWCLDCGKTVALEERFGACPDCGRHRVQMTAGDELKIRDMEVI
SIO_010081: HB778_RS40205
subclass of: SO_0000673
so part of: HB778_RS40205
location: 527324..527665
location: region:527324-527665:1
so has part: feature:527324-527665:1:exon

WP_183465661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527324-527665:1:exon

HB778_RS40210
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: hypB
locus tag: HB778_RS40210
old locus tag: HB778_40360
pseudo: true
so part of: sequence
location: 527665..>528504
location: region:527665-528504:1
so has part: feature:527665-528504:1:exon
subclass of: SO_0000010

position:528504:1
position: 528504
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527665-528504:1:exon

HB778_RS40210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: hypB
locus tag: HB778_RS40210
old locus tag: HB778_40360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004112846.1
GO function: GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hydrogenase nickel incorporation protein HypB
SIO_010081: HB778_RS40210
subclass of: SO_0000673
so part of: HB778_RS40210
location: 527665..>528504
location: region:527665-528504:1
so has part: feature:527665-528504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527665-528504:1:exon

HB778_RS40215
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: hypF
locus tag: HB778_RS40215
old locus tag: HB778_40365
pseudo: true
so part of: sequence
location: 528546..530823
location: region:528546-530823:1
so has part: feature:528546-530823:1:exon
subclass of: SO_0000010

position:528546:1
position: 528546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530823:1
position: 530823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528546-530823:1:exon

HB778_RS40215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: hypF
locus tag: HB778_RS40215
old locus tag: HB778_40365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517059.1
GO function: GO:0003998 - acylphosphatase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carbamoyltransferase HypF
SIO_010081: HB778_RS40215
subclass of: SO_0000673
so part of: HB778_RS40215
location: 528546..530823
location: region:528546-530823:1
so has part: feature:528546-530823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528546-530823:1:exon

HB778_RS40220
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40220
old locus tag: HB778_40370
so part of: sequence
location: 530814..531044
location: region:530814-531044:1
so has part: feature:530814-531044:1:exon
subclass of: SO_0000010

position:530814:1
position: 530814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531044:1
position: 531044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530814-531044:1:exon

HB778_RS40220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40220
old locus tag: HB778_40370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HypC/HybG/HupF family hydrogenase formation chaperone
translation: MCLAIPVQVKEVLPDNMAKVTLDGVSKIVSTALIDDLRPGDYLLLHVGYALAKIDPQEAERTLALIREAAAMGDAA
SIO_010081: HB778_RS40220
subclass of: SO_0000673
so part of: HB778_RS40220
location: 530814..531044
location: region:530814-531044:1
so has part: feature:530814-531044:1:exon

WP_183465662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530814-531044:1:exon

HB778_RS40225
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: hypD
locus tag: HB778_RS40225
old locus tag: HB778_40375
so part of: sequence
location: 531041..532198
location: region:531041-532198:1
so has part: feature:531041-532198:1:exon
subclass of: SO_0000010

position:531041:1
position: 531041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532198:1
position: 532198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531041-532198:1:exon

HB778_RS40225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: hypD
locus tag: HB778_RS40225
old locus tag: HB778_40375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006329038.1
GO function: GO:0016530 - metallochaperone activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase formation protein HypD
translation: MKYIDEYRDGRLAKDIARQIAALADPARSYHFMEFCGGHTHAISRYGLEDLLPANVRMIHGPGCPVCVLPIGRIDAAIALAMRPEITLCTYGDLMRVPGSNGSSLLKAKAAGADIRMVYSTLDALRIAEAELEREVVFFAIGFETTTPPTALALKAAIAKGLGNFSIFCNHVLTPPAIQNILESPDVRKLGTIKIDGFVGPAHVSTVIGTEPYEFFAGEFQKPVVVAGFEPLDVIQAILMLVRQVNDGRHEVENQYIRGVTALGNEKAQAEVANFFELRESFEWRGLGEVPYGALRLRPKYVAYDAEKRFSMVTPAAKDNPACECGAILRGVKRPADCKLFGTVCTLDTPMGSCMVSSEGACAAHWTYGRFREKARQVDGGRAVA
SIO_010081: HB778_RS40225
subclass of: SO_0000673
so part of: HB778_RS40225
location: 531041..532198
location: region:531041-532198:1
so has part: feature:531041-532198:1:exon

WP_183465663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531041-532198:1:exon

HB778_RS40230
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: hypE
locus tag: HB778_RS40230
old locus tag: HB778_40380
so part of: sequence
location: 532195..533247
location: region:532195-533247:1
so has part: feature:532195-533247:1:exon
subclass of: SO_0000010

position:532195:1
position: 532195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533247:1
position: 533247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532195-533247:1:exon

HB778_RS40230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: hypE
locus tag: HB778_RS40230
old locus tag: HB778_40380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517062.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase expression/formation protein HypE
translation: MNLMIKAYRRKLDVANGRVDLSHGAGGRAMGQLIEGVFYEAFDNDWLRAGNDQSAFSVPGGRMVMTTDGYVVSPLFFPGGNIGTLAVHGTINDIAMAGAVPLYLSASFIIEEGFPFADLERIAQSMGAASREAGVPIITGDTKVVERGKADGVFISTAGVGMVPDGLDLRSDAARPGDAVIISGSIGDHGVAVMSKRENLEFDTDIVSDSAALHGLVADMVAAGGAHIRLMRDPTRGGIAATLNEIASQSRVGFRIDEDKIPLKPEVAAACEFLGLDPLNVANEGKLVAVVAPEGADAVLAAMRAHPLGGEAALVGHVVADDNCFVQMTTSFGGGRIVDWLSGEQLPRIC
SIO_010081: HB778_RS40230
subclass of: SO_0000673
so part of: HB778_RS40230
location: 532195..533247
location: region:532195-533247:1
so has part: feature:532195-533247:1:exon

WP_183465664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532195-533247:1:exon

HB778_RS40235
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40235
old locus tag: HB778_40385
pseudo: true
so part of: sequence
location: 533257..534914
location: region:533257-534914:1
so has part: feature:533257-534914:1:exon
subclass of: SO_0000010

position:533257:1
position: 533257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534914:1
position: 534914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533257-534914:1:exon

HB778_RS40235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40235
old locus tag: HB778_40385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011830392.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: enoyl-CoA hydratase-related protein
SIO_010081: HB778_RS40235
subclass of: SO_0000673
so part of: HB778_RS40235
location: 533257..534914
location: region:533257-534914:1
so has part: feature:533257-534914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533257-534914:1:exon

HB778_RS40240
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40240
old locus tag: HB778_40390
so part of: sequence
location: 534927..535064
location: region:534927-535064:1
so has part: feature:534927-535064:1:exon
subclass of: SO_0000010

position:534927:1
position: 534927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535064:1
position: 535064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534927-535064:1:exon

HB778_RS40240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40240
old locus tag: HB778_40390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNALSTVLVVGDEVYSSKAIQRVLSDEFQVIAARNDLGLSPRGL
SIO_010081: HB778_RS40240
subclass of: SO_0000673
so part of: HB778_RS40240
location: 534927..535064
location: region:534927-535064:1
so has part: feature:534927-535064:1:exon

WP_183465665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534927-535064:1:exon

HB778_RS42615
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42615
pseudo: true
so part of: sequence
location: <536548..>536796
location: region:536548-536796:1
so has part: feature:536548-536796:1:exon
subclass of: SO_0000010

position:536548:1
position: 536548
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:536796:1
position: 536796
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536548-536796:1:exon

HB778_RS42615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003537795.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: HB778_RS42615
subclass of: SO_0000673
so part of: HB778_RS42615
location: <536548..>536796
location: region:536548-536796:1
so has part: feature:536548-536796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536548-536796:1:exon

HB778_RS40250
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: dcd
locus tag: HB778_RS40250
old locus tag: HB778_40400
so part of: sequence
location: 537372..537941
location: region:537372-537941:1
so has part: feature:537372-537941:1:exon
subclass of: SO_0000010

position:537372:1
position: 537372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537941:1
position: 537941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537372-537941:1:exon

HB778_RS40250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: dcd
locus tag: HB778_RS40250
old locus tag: HB778_40400
EC number: 3.5.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008873464.1
GO function: GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO process: GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dCTP deaminase
translation: MILTDREIQIALESKAIIVEPTPGEEQYSSTSLDLRLDKILTIFKRPKGGVDICIDPSNREYDHEAVFGDISTEIEIDDKKGYDFQPNDMVLGWTEEYIALTFHSRLAARVEGKSSLARLGIGVHLTAPTIHAGFTGRIRLEMVNHNVMPIRLRTGMRVCQLIFEQTLGTPVQGYKGRFAGQMAGAKKG
SIO_010081: HB778_RS40250
subclass of: SO_0000673
so part of: HB778_RS40250
location: 537372..537941
location: region:537372-537941:1
so has part: feature:537372-537941:1:exon

WP_183455169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537372-537941:1:exon

HB778_RS40255
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: panC
locus tag: HB778_RS40255
old locus tag: HB778_40405
pseudo: true
so part of: sequence
location: 537949..538798
location: region:537949-538798:1
so has part: feature:537949-538798:1:exon
subclass of: SO_0000010

position:537949:1
position: 537949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538798:1
position: 538798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537949-538798:1:exon

HB778_RS40255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: panC
locus tag: HB778_RS40255
old locus tag: HB778_40405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533318.1
GO function: GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pantoate--beta-alanine ligase
SIO_010081: HB778_RS40255
subclass of: SO_0000673
so part of: HB778_RS40255
location: 537949..538798
location: region:537949-538798:1
so has part: feature:537949-538798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537949-538798:1:exon

HB778_RS42620
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42620
pseudo: true
so part of: sequence
location: 538840..>539187
location: region:538840-539187:1
so has part: feature:538840-539187:1:exon
subclass of: SO_0000010

position:538840:1
position: 538840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539187:1
position: 539187
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538840-539187:1:exon

HB778_RS42620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42620
inference: COORDINATES: protein motif:HMM:NF015437.2
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: autoinducer binding domain-containing protein
SIO_010081: HB778_RS42620
subclass of: SO_0000673
so part of: HB778_RS42620
location: 538840..>539187
location: region:538840-539187:1
so has part: feature:538840-539187:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538840-539187:1:exon

HB778_RS42625
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42625
so part of: sequence
location: 539230..539394
location: region:539230-539394:1
so has part: feature:539230-539394:1:exon
subclass of: SO_0000010

position:539230:1
position: 539230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539394:1
position: 539394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539230-539394:1:exon

HB778_RS42625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42625
inference: COORDINATES: protein motif:HMM:NF012422.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR C-terminal-related transcriptional regulator
translation: MAINFHIHVRRRLANDHVVDGATLNPREFECLKWTARGKSPWGVSQILGVSKRT
SIO_010081: HB778_RS42625
subclass of: SO_0000673
so part of: HB778_RS42625
location: 539230..539394
location: region:539230-539394:1
so has part: feature:539230-539394:1:exon

WP_244662210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539230-539394:1:exon

HB778_RS40265
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40265
old locus tag: HB778_40415
so part of: sequence
location: 540178..541569
location: region:540178-541569:1
so has part: feature:540178-541569:1:exon
subclass of: SO_0000010

position:540178:1
position: 540178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541569:1
position: 541569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540178-541569:1:exon

HB778_RS40265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40265
old locus tag: HB778_40415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006335248.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family outer membrane protein
translation: MPTVRNSIFAIIFCSASILPPLTASAETIFGTLSKAYQNNSSLNSSRAGTRVTDEGVAIAKSGWRPTITGSADIEYSSSHLNGSNRSVRLTQGNFGVEIDQTLFDGFQTRNNVAAAEAQVGASVESLRNAEQDTLFNAAQAYMNVIRDRQVAVLTEQNLQFLTEQARAARSSFEVGEGTRTDVAQADAQRANAVAKLSAVRARALASAATYRQIVGDEPGKLRPAAPVAKLLPSSLDAAIAITSAEHPAILATRLLVDAAAFSVKSAEGALLPQLSASAGVSSAYRNTVPGVITSGTEGTTNSASIGATLTVPIYSGGRTSALVRQSKESLSQARIKVDVSRDQVRQAVTAAWTAYTAAQQSVAANRQAIAAAQLALNGVIEERNVGQRTTLDVLNAQNDLITGKIDLASAEHDVVVASYAILQATGRLSVERLGLNVTKYKPEDHYNAVKDKWIGLRTPDGR
SIO_010081: HB778_RS40265
subclass of: SO_0000673
so part of: HB778_RS40265
location: 540178..541569
location: region:540178-541569:1
so has part: feature:540178-541569:1:exon

WP_183465666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540178-541569:1:exon

HB778_RS42630
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42630
so part of: sequence
location: 541892..542281
location: region:541892-542281:1
so has part: feature:541892-542281:1:exon
subclass of: SO_0000010

position:541892:1
position: 541892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542281:1
position: 542281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541892-542281:1:exon

HB778_RS42630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIILKEDTAHRPRPSVEIASSFFADASQSDATSARFFWDPRDCARILRAAAEPVGLDHDFEPLDLSPLSCGKDILLTPAGVQHVLLREDCRSLQIAVSGASVLRPLRLYVDAIVPPRHLKFHVAARSF
SIO_010081: HB778_RS42630
subclass of: SO_0000673
so part of: HB778_RS42630
location: 541892..542281
location: region:541892-542281:1
so has part: feature:541892-542281:1:exon

WP_244662147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541892-542281:1:exon

HB778_RS42635
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42635
so part of: sequence
location: 542356..542541
location: region:542356-542541:1
so has part: feature:542356-542541:1:exon
subclass of: SO_0000010

position:542356:1
position: 542356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542541:1
position: 542541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542356-542541:1:exon

HB778_RS42635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42635
inference: COORDINATES: protein motif:HMM:NF021581.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2285 domain-containing protein
translation: MLQALDGSLAGASQEIAIALFGRRRVEEDWSHPGSHLRDQVRRAVQSGRYLMGGGYRQFLV
SIO_010081: HB778_RS42635
subclass of: SO_0000673
so part of: HB778_RS42635
location: 542356..542541
location: region:542356-542541:1
so has part: feature:542356-542541:1:exon

WP_244662148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542356-542541:1:exon

HB778_RS40275
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40275
old locus tag: HB778_40425
so part of: sequence
location: 542744..543718
location: region:542744-543718:1
so has part: feature:542744-543718:1:exon
subclass of: SO_0000010

position:542744:1
position: 542744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543718:1
position: 543718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542744-543718:1:exon

HB778_RS40275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40275
old locus tag: HB778_40425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006330287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDTHPDKAGAASLEAIARNGSMLHRIAVRIPTYLSDFRENPAWLPMFMLARTMPARRMHWRGAKPVRVSQKAQDTMFAGVNRQDVVDALRSDGLFSGLVLPTMVSEDVAAFARCTPCFGNFDRRLEFMPTEHAEAEVRFGRPLLSGHYFERILGCKAALAIQNDPLLMDIAAHYLGGQAKLITTRVWWSFPTGQASDADKNLASLGKYHFDLDDWRMLKFFFYLMPVDEGTGPHVYVRGSHNRRALKHQLTLLVGHPAQEVLDVYGEQSPVTLTGEAGLGFVEDPFGFHMGTVPARRPRLMMEVGFGVSPPSRRRFHGEPVIR
SIO_010081: HB778_RS40275
subclass of: SO_0000673
so part of: HB778_RS40275
location: 542744..543718
location: region:542744-543718:1
so has part: feature:542744-543718:1:exon

WP_183455167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542744-543718:1:exon

HB778_RS40280
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: glmS
locus tag: HB778_RS40280
old locus tag: HB778_40430
pseudo: true
so part of: sequence
location: 544557..546379
location: region:544557-546379:1
so has part: feature:544557-546379:1:exon
subclass of: SO_0000010

position:544557:1
position: 544557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546379:1
position: 546379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544557-546379:1:exon

HB778_RS40280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: glmS
locus tag: HB778_RS40280
old locus tag: HB778_40430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010971865.1
GO function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutamine--fructose-6-phosphate transaminase (isomerizing)
SIO_010081: HB778_RS40280
subclass of: SO_0000673
so part of: HB778_RS40280
location: 544557..546379
location: region:544557-546379:1
so has part: feature:544557-546379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544557-546379:1:exon

HB778_RS40285
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40285
old locus tag: HB778_40435
so part of: sequence
location: 547083..547298
location: region:547083-547298:1
so has part: feature:547083-547298:1:exon
subclass of: SO_0000010

position:547083:1
position: 547083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547298:1
position: 547298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547083-547298:1:exon

HB778_RS40285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40285
old locus tag: HB778_40435
inference: COORDINATES: protein motif:HMM:NF013540.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSQGTHIIRAYREHLGYSIEDLAVACGLAAEEIQNIESGLRYNKGYRDRIARSLSIPVGILEAESDISDAA
SIO_010081: HB778_RS40285
subclass of: SO_0000673
so part of: HB778_RS40285
location: 547083..547298
location: region:547083-547298:1
so has part: feature:547083-547298:1:exon

WP_244662211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547083-547298:1:exon

HB778_RS40290
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40290
old locus tag: HB778_40440
so part of: sequence
location: complement(548237..548626)
location: region:548237-548626:-1
so has part: feature:548237-548626:-1:exon
subclass of: SO_0000010

position:548237:-1
position: 548237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548626:-1
position: 548626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548237-548626:-1:exon

HB778_RS40290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40290
old locus tag: HB778_40440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVNELDLMVFQMAVESVRSLSLSFAEKAAEIATRSRGILLFDVRVDGDAEVQRVAAIRYLGDRTGVLALDRQGLVTHRCIVNGTFSHLIAPLENWNSMPLSMQAKIDANGHASLFLGALRNAGHMLGS
SIO_010081: HB778_RS40290
subclass of: SO_0000673
so part of: HB778_RS40290
location: complement(548237..548626)
location: region:548237-548626:-1
so has part: feature:548237-548626:-1:exon

WP_183465668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548237-548626:-1:exon

HB778_RS40295
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: queC
locus tag: HB778_RS40295
old locus tag: HB778_40445
so part of: sequence
location: 549249..549947
location: region:549249-549947:1
so has part: feature:549249-549947:1:exon
subclass of: SO_0000010

position:549249:1
position: 549249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549947:1
position: 549947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549249-549947:1:exon

HB778_RS40295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: queC
locus tag: HB778_RS40295
old locus tag: HB778_40445
EC number: 6.3.4.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533307.1
GO process: GO:0008616 - queuosine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 7-cyano-7-deazaguanine synthase QueC
translation: MKTLVICSGGLDSVTLAHKVAAEYELAGLLSFDYGQRHRKELGFAALCAERLNVPHRSIDIRQIGRGLSGSALTDSVDVPDGHYAEDTMKVTVVPNRNAIMLATAFGLAAAHKVEAVATAVHGGDHFIYPDCRPAFIDAFQMMQDRALDGYAKVRLYAPYVNLTKADIVRDGATYGTPFAQTWSCYKGAERHCGRCGTCVERREAFHLSGHLDPTDYEDSDFWLDALRRRTA
SIO_010081: HB778_RS40295
subclass of: SO_0000673
so part of: HB778_RS40295
location: 549249..549947
location: region:549249-549947:1
so has part: feature:549249-549947:1:exon

WP_183465669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549249-549947:1:exon

HB778_RS40300
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: queD
locus tag: HB778_RS40300
old locus tag: HB778_40450
so part of: sequence
location: 549947..550303
location: region:549947-550303:1
so has part: feature:549947-550303:1:exon
subclass of: SO_0000010

position:550303:1
position: 550303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549947-550303:1:exon

HB778_RS40300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: queD
locus tag: HB778_RS40300
old locus tag: HB778_40450
EC number: 4.1.2.50
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003528526.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0008616 - queuosine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-carboxytetrahydropterin synthase QueD
translation: MFRITKEFHFSASHQLTSLPPDHQCARLHGHNYIVEVELSANGLNDNGFVRDYHDLAPFKRYIDESFDHRHLNDVLGHEQVTAECLARHFYLWCKARLPETSAVRVSETPKTWAEYRP
SIO_010081: HB778_RS40300
subclass of: SO_0000673
so part of: HB778_RS40300
location: 549947..550303
location: region:549947-550303:1
so has part: feature:549947-550303:1:exon

WP_123169385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549947-550303:1:exon

HB778_RS40305
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: queE
locus tag: HB778_RS40305
old locus tag: HB778_40455
so part of: sequence
location: 550300..551034
location: region:550300-551034:1
so has part: feature:550300-551034:1:exon
subclass of: SO_0000010

position:550300:1
position: 550300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551034:1
position: 551034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550300-551034:1:exon

HB778_RS40305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: queE
locus tag: HB778_RS40305
old locus tag: HB778_40455
EC number: 4.3.99.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533305.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 7-carboxy-7-deazaguanine synthase QueE
translation: MTDTHPAIRVSEIFGPTIQGEGVLIGLPTVFIRTGGCDYRCSWCDSLHAVDNQFRHEWEMMPIDAVWQTVVTLSGGRPVMVSLSGGNPAIQPFRALIERGHGEGYRFALETQGSVVRDWFADLDVLVLSPKPPSSEMRTDWATLEACVDAAQEKPQIVLKLVVFDESDYAYAKGAAERFPRLPVYLQPGNHTPPRPGNEDASVDLDGIMKRMEWLVEKVTGDRWFDARVLPQLHVLLWGNKRAV
SIO_010081: HB778_RS40305
subclass of: SO_0000673
so part of: HB778_RS40305
location: 550300..551034
location: region:550300-551034:1
so has part: feature:550300-551034:1:exon

WP_183455159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550300-551034:1:exon

HB778_RS40310
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40310
old locus tag: HB778_40460
pseudo: true
so part of: sequence
location: 551824..553064
location: region:551824-553064:1
so has part: feature:551824-553064:1:exon
subclass of: SO_0000010

position:551824:1
position: 551824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553064:1
position: 553064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551824-553064:1:exon

HB778_RS40310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40310
old locus tag: HB778_40460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013896863.1
GO function: GO:0015293 - symporter activity [Evidence IEA]
GO process: GO:0006835 - dicarboxylic acid transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: dicarboxylate/amino acid:cation symporter
SIO_010081: HB778_RS40310
subclass of: SO_0000673
so part of: HB778_RS40310
location: 551824..553064
location: region:551824-553064:1
so has part: feature:551824-553064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:551824-553064:1:exon

HB778_RS42640
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42640
so part of: sequence
location: 553362..553508
location: region:553362-553508:1
so has part: feature:553362-553508:1:exon
subclass of: SO_0000010

position:553362:1
position: 553362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553508:1
position: 553508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553362-553508:1:exon

HB778_RS42640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKPTPGLVVSIALLALALLFSALGALHHPAVIDYLQQLEDRRQLAGN
SIO_010081: HB778_RS42640
subclass of: SO_0000673
so part of: HB778_RS42640
location: 553362..553508
location: region:553362-553508:1
so has part: feature:553362-553508:1:exon

WP_244662149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553362-553508:1:exon

HB778_RS40315
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40315
old locus tag: HB778_40465
so part of: sequence
location: 553511..554050
location: region:553511-554050:1
so has part: feature:553511-554050:1:exon
subclass of: SO_0000010

position:553511:1
position: 553511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554050:1
position: 554050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553511-554050:1:exon

HB778_RS40315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40315
old locus tag: HB778_40465
inference: COORDINATES: protein motif:HMM:NF024853.2
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsbA family protein
translation: MLIAARRDALFNDPAAPTAGNPESDVALVTFFDYNCPPCRNAALNIQQAIKDDWSLKLVFKEFPILGPASKFAAVAALASHKQGKYEAFHRALMGFHDLVNERSTLTIAADVGLDVEQLKRDMEDPAIADAIARNGALAGDLYITGTPALVVGDEVIPGMVDVATLQRSIANARAKPEG
SIO_010081: HB778_RS40315
subclass of: SO_0000673
so part of: HB778_RS40315
location: 553511..554050
location: region:553511-554050:1
so has part: feature:553511-554050:1:exon

WP_244662150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553511-554050:1:exon

HB778_RS42645
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42645
pseudo: true
so part of: sequence
location: 554072..>554167
location: region:554072-554167:1
so has part: feature:554072-554167:1:exon
subclass of: SO_0000010

position:554072:1
position: 554072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554167:1
position: 554167
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554072-554167:1:exon

HB778_RS42645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003596964.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein CcdA
SIO_010081: HB778_RS42645
subclass of: SO_0000673
so part of: HB778_RS42645
location: 554072..>554167
location: region:554072-554167:1
so has part: feature:554072-554167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554072-554167:1:exon

HB778_RS42650
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: repC
locus tag: HB778_RS42650
pseudo: true
so part of: sequence
location: <554327..>554624
location: region:554327-554624:1
so has part: feature:554327-554624:1:exon
subclass of: SO_0000010

position:554327:1
position: 554327
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:554624:1
position: 554624
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554327-554624:1:exon

HB778_RS42650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: repC
locus tag: HB778_RS42650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654975.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: replication initiation protein RepC
SIO_010081: HB778_RS42650
subclass of: SO_0000673
so part of: HB778_RS42650
location: <554327..>554624
location: region:554327-554624:1
so has part: feature:554327-554624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554327-554624:1:exon

HB778_RS40325
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40325
old locus tag: HB778_40475
so part of: sequence
location: complement(554827..555036)
location: region:554827-555036:-1
so has part: feature:554827-555036:-1:exon
subclass of: SO_0000010

position:554827:-1
position: 554827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555036:-1
position: 555036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554827-555036:-1:exon

HB778_RS40325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40325
old locus tag: HB778_40475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006472548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METRIIDSRDDFAQWAIDRANAILTDEGSELATAARNGNEAQMGETAQALGQAIVEALLEAFDGLVGDE
SIO_010081: HB778_RS40325
subclass of: SO_0000673
so part of: HB778_RS40325
location: complement(554827..555036)
location: region:554827-555036:-1
so has part: feature:554827-555036:-1:exon

WP_183465670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554827-555036:-1:exon

HB778_RS42655
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42655
pseudo: true
so part of: sequence
location: complement(<555147..>555342)
location: region:555147-555342:-1
so has part: feature:555147-555342:-1:exon
subclass of: SO_0000010

position:555147:-1
position: 555147
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:555342:-1
position: 555342
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555147-555342:-1:exon

HB778_RS42655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501258.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: HB778_RS42655
subclass of: SO_0000673
so part of: HB778_RS42655
location: complement(<555147..>555342)
location: region:555147-555342:-1
so has part: feature:555147-555342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:555147-555342:-1:exon

HB778_RS40330
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: hemN
locus tag: HB778_RS40330
old locus tag: HB778_40480
so part of: sequence
location: complement(555769..557118)
location: region:555769-557118:-1
so has part: feature:555769-557118:-1:exon
subclass of: SO_0000010

position:555769:-1
position: 555769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557118:-1
position: 557118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555769-557118:-1:exon

HB778_RS40330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: hemN
locus tag: HB778_RS40330
old locus tag: HB778_40480
EC number: 1.3.98.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006329232.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygen-independent coproporphyrinogen III oxidase
translation: MRPELTARLGENVPRYTSYPTAPHFHPGVDAAVQKGWLEALEGGDEISLYLHIPYCDRLCWFCACHTKQTRHYEPVTAYLRSLRAEIATVAALISGKVFVRAIHFGGGSPTMLKPEDMVALGAFMRDSFDFVPNTKISIEIDPNDMDEARLDALAEIGMTRASLGVQDFDPKVQKAINREQSFLQTKAVVDGVRSRGVESVNLDLLYGLPHQTSESLCSTVAQALTLEPDRMALFGYAHVPWFKKHQTMIDEAWLPGPTERFAQSQLAARAILDKGYEAIGLDHFAKPGDALAVAASTGALHRNFQGYTEDRCETLIGVGPSSISRFRQGYLQNNPSTAEYGRMVANGGLAAVRGIAFSDDDRVRGWIIERLMCDFAFSAIDLVESFGQAGQKLLFQASSIALQDPARLLELQGDSFVVLAESRPFVRSVAAKFDKYLESGTARHSVAV
SIO_010081: HB778_RS40330
subclass of: SO_0000673
so part of: HB778_RS40330
location: complement(555769..557118)
location: region:555769-557118:-1
so has part: feature:555769-557118:-1:exon

WP_183465911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555769-557118:-1:exon

HB778_RS40335
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40335
old locus tag: HB778_40485
so part of: sequence
location: 557275..558021
location: region:557275-558021:1
so has part: feature:557275-558021:1:exon
subclass of: SO_0000010

position:557275:1
position: 557275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558021:1
position: 558021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557275-558021:1:exon

HB778_RS40335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40335
old locus tag: HB778_40485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010914028.1
GO function: GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MTVRQDIHSSGIPVLCLPCEARHRGVCGALDPDDLARLAKTSSRHKIEPGVELIGDAEAVDSYSNVLSGVVKLTKSLSDGRQQIVGLQFAPDFLGRPFKVKSAINAEAATVVLLCSFPRAAIERMMKESPELEHRLLKQTLNELDEAREWMVTLGRKTAPEKVASFLLMIARNIDSSVGPAARSACFDLPLTRAEISDFLGLTNETVSRQLTRLRMDGVIRIENNRRVTVDSVSRLEQRCGGRGATAL
SIO_010081: HB778_RS40335
subclass of: SO_0000673
so part of: HB778_RS40335
location: 557275..558021
location: region:557275-558021:1
so has part: feature:557275-558021:1:exon

WP_183465671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557275-558021:1:exon

HB778_RS40340
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: ccoN
locus tag: HB778_RS40340
old locus tag: HB778_40490
so part of: sequence
location: 558683..560314
location: region:558683-560314:1
so has part: feature:558683-560314:1:exon
subclass of: SO_0000010

position:558683:1
position: 558683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560314:1
position: 560314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558683-560314:1:exon

HB778_RS40340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: ccoN
locus tag: HB778_RS40340
old locus tag: HB778_40490
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008871934.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome-c oxidase, cbb3-type subunit I
translation: MKFGTEIVLLSLFAFAALVAAGFGVDEPFRQHMWVLFFAVAGFTAILLRNTEFKPAVPIHPAAYMDGPIRYGAVATVIWGVVGMLVGVVIALQLAYPDLNIEPWFNFGRLRPLHTSGVVFAFGGNALLCTSLYVVQRTCRARLFGGDLAWFVFWGYQLFIVMAATGYLLGITESREYAEPEWYVDLWLTIVWVAYLILFLGTILKRKESHIYVANWFYLSFIVTIAMLHVINNLSMPVSFVGSKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFVPKQANRPVYSYRLSIIHFWALIFLYIWAGPHHLHYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKLRTDPIMRMMVMAIAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHSGALGWVGMISFGAIYFMVPKLWNRERLYSLRLVNWHFWLATLGIVLYAAVMWVSGVMQGLMWREYDEQGFLIYSFAETVAAMHPYYIMRAIGGAMYLSGALIMAWNIAMTIFGYQREEDPMPGAIPALQRARSGARKWA
SIO_010081: HB778_RS40340
subclass of: SO_0000673
so part of: HB778_RS40340
location: 558683..560314
location: region:558683-560314:1
so has part: feature:558683-560314:1:exon

WP_183465672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558683-560314:1:exon

HB778_RS40345
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: ccoO
locus tag: HB778_RS40345
old locus tag: HB778_40495
so part of: sequence
location: 560305..561036
location: region:560305-561036:1
so has part: feature:560305-561036:1:exon
subclass of: SO_0000010

position:560305:1
position: 560305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561036:1
position: 561036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560305-561036:1:exon

HB778_RS40345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: ccoO
locus tag: HB778_RS40345
old locus tag: HB778_40495
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003526714.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome-c oxidase, cbb3-type subunit II
translation: MGLMDKHAIIEKNATLLLVGSLLVVTVGGIVEIAPLFYLDNTIEKVEGMRPYSPLELAGRNIYVREGCYLCHSQMIRPFRDEVERYGHYSLAAESMYDHPFQWGSKRTGPDLARVGDRYSNEWHVQHLADPRSVVPESIMPSYEFLKNTPIEVKDFSTHLIANRRVGVPYSDDMIANANVDLMAQADPNIDTSGVEARYPRAKLGDFDGNPQQVTEMDALVAYLQMLGTLVDFKTYDEAAGYR
SIO_010081: HB778_RS40345
subclass of: SO_0000673
so part of: HB778_RS40345
location: 560305..561036
location: region:560305-561036:1
so has part: feature:560305-561036:1:exon

WP_183465673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560305-561036:1:exon

HB778_RS40350
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40350
old locus tag: HB778_40500
so part of: sequence
location: 561048..561197
location: region:561048-561197:1
so has part: feature:561048-561197:1:exon
subclass of: SO_0000010

position:561048:1
position: 561048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561197:1
position: 561197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561048-561197:1:exon

HB778_RS40350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40350
old locus tag: HB778_40500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008840719.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome c oxidase subunit 3
translation: MDYNLMREFADSWGLLAMALFFVGCVAFALRPGGRRQADEAARIPLKDD
SIO_010081: HB778_RS40350
subclass of: SO_0000673
so part of: HB778_RS40350
location: 561048..561197
location: region:561048-561197:1
so has part: feature:561048-561197:1:exon

WP_095496049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561048-561197:1:exon

HB778_RS40355
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: ccoP
locus tag: HB778_RS40355
old locus tag: HB778_40505
so part of: sequence
location: 561200..562063
location: region:561200-562063:1
so has part: feature:561200-562063:1:exon
subclass of: SO_0000010

position:561200:1
position: 561200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562063:1
position: 562063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561200-562063:1:exon

HB778_RS40355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: ccoP
locus tag: HB778_RS40355
old locus tag: HB778_40505
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006329244.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome-c oxidase, cbb3-type subunit III
translation: MSSEHIDEVSGISTTGHEWDGIRELNNPLPRWWVTTFYITIVWAIGYTIAYPAWPMLTSATRGVLGYSSRNHVKNELAAAEAAKAKYVAAVESKTASEIAADDALREFAVAAGGAAFRVNCVQCHGSGAQGSKGFPNLNDDDWLWGGSAEQIQQTITHGIRFASDPDTRLSEMPAFGDIITADEIAQVSAYVASLSGLVRDASMIEPGAKVFAENCVACHGDTAKGNRELGAPDLTDAIWLYGPGETAIAAQVRAPKHGVMPAWIGRLGETKVKELAVYVHSLGGGE
SIO_010081: HB778_RS40355
subclass of: SO_0000673
so part of: HB778_RS40355
location: 561200..562063
location: region:561200-562063:1
so has part: feature:561200-562063:1:exon

WP_183465674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561200-562063:1:exon

HB778_RS40360
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: ccoG
locus tag: HB778_RS40360
old locus tag: HB778_40510
pseudo: true
so part of: sequence
location: 562269..563827
location: region:562269-563827:1
so has part: feature:562269-563827:1:exon
subclass of: SO_0000010

position:562269:1
position: 562269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563827:1
position: 563827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562269-563827:1:exon

HB778_RS40360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: ccoG
locus tag: HB778_RS40360
old locus tag: HB778_40510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010914194.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome c oxidase accessory protein CcoG
SIO_010081: HB778_RS40360
subclass of: SO_0000673
so part of: HB778_RS40360
location: 562269..563827
location: region:562269-563827:1
so has part: feature:562269-563827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562269-563827:1:exon

HB778_RS40365
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40365
old locus tag: HB778_40515
so part of: sequence
location: 563824..564321
location: region:563824-564321:1
so has part: feature:563824-564321:1:exon
subclass of: SO_0000010

position:563824:1
position: 563824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564321:1
position: 564321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563824-564321:1:exon

HB778_RS40365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40365
old locus tag: HB778_40515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013897071.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FixH family protein
translation: MSANPQKSREFTGRHMLVTILAFFAVVIGVNLTMATLANTSWTGLVVENTYVASQQFNRRAEEWRAQAALGWTGKLTIASGEVRYSLSDAVGKPVPLHSVSVLFRHPAYEAEDKSIILTFATDQEFAAYHTPKDGVWIVEVDADAGLAEPYREVHRIIISQGVLQ
SIO_010081: HB778_RS40365
subclass of: SO_0000673
so part of: HB778_RS40365
location: 563824..564321
location: region:563824-564321:1
so has part: feature:563824-564321:1:exon

WP_183465675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:563824-564321:1:exon

HB778_RS40370
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40370
old locus tag: HB778_40520
so part of: sequence
location: 564318..566603
location: region:564318-566603:1
so has part: feature:564318-566603:1:exon
subclass of: SO_0000010

position:564318:1
position: 564318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566603:1
position: 566603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564318-566603:1:exon

HB778_RS40370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40370
old locus tag: HB778_40520
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008840723.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MSCCAPGAEMALDVAGAASVLPSSQEIKLASRSLGGDLYQTDLSVPAVHCAACIRAIETALGKLDRVEGARVNLSTKRVSVRWRGDEVPPFVATLGRLGYDAHLFEPEAYGKDKTLSELIRAVAVAGFAAGNIMLLSVSVWSGAAGATRDLFHWVSALIAIPALAFAGGIFFRSAWNALRHGRMNMDVPIAVGVSLAYAMSLYETINHGDHAYFDASVSLLFFLLIGRTLDHVMRERARTAVKGLSQLAARGAMVLRGDGAHDYLPVGEIEPGMQLLIAAGERIPVDGKIIRGSSDLDCSLVSGESTPRTVASGEAVQAGILNLTGPLTVQATAAAKDSFLEEMVRLMEAAEGGRAHYRRIADRVSALYAPVVHLAAFVTFAGWMAATGDWHRAMTIAIAVLIITCPCALGLAVPIVQVVAARRLFESGIMVKDGSAMERLAAIDTAVFDKTGTLTLGQPHLVNAPSIKPAMLAIAADMAAHSRHPFSRAIAGFAGFAGQPKLESVSEHPGFGIEATAAGSTWRLGRRGWAGWRARTGGEGKHGYGGTVLTKDGIIVASFVFEDALRADARAAIVQLNDARVSMEMLSGDTAAACADVAKALGIDRFVPVLVPSGKVECIEALARAGHKVLMVGDGLNDTPALSAAHVSIAPATAADIGRNAADFVFLRESLLAVPLALDVSRKAGRLIRQNIAIAIVYNTIAVPIAILGHVTPLIAAIAMSASSLLVIGNALRLQGFVLAEVTGAPSATRAGIRASVQPS
SIO_010081: HB778_RS40370
subclass of: SO_0000673
so part of: HB778_RS40370
location: 564318..566603
location: region:564318-566603:1
so has part: feature:564318-566603:1:exon

WP_183465676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564318-566603:1:exon

HB778_RS40375
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: ccoS
locus tag: HB778_RS40375
old locus tag: HB778_40525
so part of: sequence
location: 566600..566755
location: region:566600-566755:1
so has part: feature:566600-566755:1:exon
subclass of: SO_0000010

position:566600:1
position: 566600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566755:1
position: 566755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566600-566755:1:exon

HB778_RS40375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: ccoS
locus tag: HB778_RS40375
old locus tag: HB778_40525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006329249.1
GO process: GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome oxidase assembly protein CcoS
translation: MTTLVYLIPAALFLGALGLSGFLWALRSGQYEDLHGAAERILIDRDDKPER
SIO_010081: HB778_RS40375
subclass of: SO_0000673
so part of: HB778_RS40375
location: 566600..566755
location: region:566600-566755:1
so has part: feature:566600-566755:1:exon

WP_095496053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566600-566755:1:exon

HB778_RS40380
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40380
old locus tag: HB778_40530
so part of: sequence
location: 567054..567524
location: region:567054-567524:1
so has part: feature:567054-567524:1:exon
subclass of: SO_0000010

position:567054:1
position: 567054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567524:1
position: 567524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567054-567524:1:exon

HB778_RS40380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40380
old locus tag: HB778_40530
inference: COORDINATES: protein motif:HMM:NF024770.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MVVVGSFNGSRRRTPRRPVWIKTDTKNGQSQKSAEALGRDTAARLFSGPQTPNAIFCGNDQIAGGACDTLREIGLAVPADVAIVGFNNWDGMVLATRPRQASLDENLNALGRDAGDSVLEMIAERRQASTVFSGRAGIVEAVSTPMHFIAGTDAFQ
SIO_010081: HB778_RS40380
subclass of: SO_0000673
so part of: HB778_RS40380
location: 567054..567524
location: region:567054-567524:1
so has part: feature:567054-567524:1:exon

WP_183465677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567054-567524:1:exon

HB778_RS40385
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40385
old locus tag: HB778_40535
so part of: sequence
location: 567521..569419
location: region:567521-569419:1
so has part: feature:567521-569419:1:exon
subclass of: SO_0000010

position:567521:1
position: 567521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569419:1
position: 569419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567521-569419:1:exon

HB778_RS40385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40385
old locus tag: HB778_40535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008837259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 127 protein
translation: MNEFKPVQFVDVALEGQFWRERLETVLTRTIPTQHVQLGKHGILQSLTLPNPPPLSSAPNQHNFVQVFWDSDAGKWIEAASYALSHRPDADIEARIEKIVDDLENAQAADGYLNCWHLQREPDKRWTNLRDYHELYNLGHLLEGGIAYFLATGRRRLLDILERYVDHVRKTFGPNPGQKHGYCGHQEIELALIKLYRLTGARKHLELAAYFINERGRQPHYFDQEAVARGESPGDFWAKRYEYNQSHRPVREQTKVVGHAVRAMYMFSAMADLAAELNDDGLKKACEVLWADVMTSKIYITSGLGSAAANEGFTEDHDLPNDTAYAETCASVALIFWAHRMLHLDLDGRYADVMEQALFNGALTGLSRDGEHYFYSNPLDSDGRHSRWAWHTCPCCTMNSSRLIASVGGYFVSASEDAIAFHLYGGISTNIRLATGNVFLRETSAYPWFGSIRIEVSPDAPAEFAVKLRIPGWAHEAEASVEGHPIDVEACTRNGYLSISRLWNAGDTITLELPMPPERIYAHPKVSQDIGRVALKRGPLVYCVEHVDNPGGRVQQLKLPRDAWIETEERGDLFDGVVTLTAPAKRVVDQGWGDSLYRNAPPVVSDCRLIALPYFLWNNRAKGSMQVWLLES
SIO_010081: HB778_RS40385
subclass of: SO_0000673
so part of: HB778_RS40385
location: 567521..569419
location: region:567521-569419:1
so has part: feature:567521-569419:1:exon

WP_183465678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567521-569419:1:exon

HB778_RS40390
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: ubiM
locus tag: HB778_RS40390
old locus tag: HB778_40540
so part of: sequence
location: 569808..570989
location: region:569808-570989:1
so has part: feature:569808-570989:1:exon
subclass of: SO_0000010

position:569808:1
position: 569808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570989:1
position: 570989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569808-570989:1:exon

HB778_RS40390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: ubiM
locus tag: HB778_RS40390
old locus tag: HB778_40540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006328875.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-demethoxyubiquinol-8 5-hydroxylase UbiM
translation: MAGSDESFDIVIVGGGPVGLSFAASLGQSELKVAVVEQQSLERLANPAFDGREIALTYASIRILRELGAWDAIPVSHKSPLQGARVLNGSSPFALCFDPPRGSGEPLGFLVPNCRIRDALFKIIRSQDHARLICGHSVVGATNSHKGAVITLSDGRQLTARLLVAADSRFSATRDLLGIGADINRLGKAMLICRVRHERVHQQIAVEWFDHHQTIAMLPLMEGVSSLLLTLPLNEADRLLAFDDDLFLMELTNRCRGRLGEMALASTRHSYPLVTTWAHKFWAPSAALIGDAAIGMHPVTAHGFNIALSGQKQLAHRILTVCRDRRDIADPDMLHRYESCLRRSAAPLYHATNILVGLYSGEHPAARLARHAGLRFAQYLPFVRHGISAMLRR
SIO_010081: HB778_RS40390
subclass of: SO_0000673
so part of: HB778_RS40390
location: 569808..570989
location: region:569808-570989:1
so has part: feature:569808-570989:1:exon

WP_183465679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569808-570989:1:exon

HB778_RS40395
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40395
old locus tag: HB778_40545
so part of: sequence
location: 571227..573134
location: region:571227-573134:1
so has part: feature:571227-573134:1:exon
subclass of: SO_0000010

position:571227:1
position: 571227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573134:1
position: 573134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571227-573134:1:exon

HB778_RS40395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40395
old locus tag: HB778_40545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008871945.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MDLKKEDTLEAKIRQDQLADLRAGLFVSMPISTVLSSLILTVQALSGGGFGAAIWFLVINAINVGRLALARYQLKQTGHQDDLTGISPRLRWFGILALLAGFAWSFLAVLTVGYTTPHAPLHLIILAGISAGAVTYGSSYAAAATNFITPPLLITAGCLLAKGNFEGYVLSFAVLLFLGGLVRAAFVGQARFREASRLRHEAERLAAEMEANSRQDHLTALLNRRGLEHAIGRFETADGPFVAMLIDLDGFKSVNDTYGHRTGDDLLVRIARRIEQEAPEGSTLARIGGDEFVLFFPSLVDSLSASDLASNIIAKIARPYPEVASVRVGASIGIYLAESPGLTEMLLRADIALYTAKRRGRNEFCLFDADLDRELQRRQSIERDLHSAVKTRSLAPWFQPIVKLDTEAVVGFEALLRWSHPIHGSISPPEIVTAARQTGMLQLLTQTVFADCCALIDGMVKADCRDLRVAMNVSPRELEAGDIDDMVLDGLAAKDLPATMFEIEITEESPVDPDRVDEKLGRLSHAGISIALDDFGTGFSTLASLKDSRIRKVKIDQGFIRGLAKSREDRLLVKTVIDLGRTLGIDVMAEGVETEADRQTLLELGCRTAQGFLFSKAVPLNQAIDLAVKEHAKEL
SIO_010081: HB778_RS40395
subclass of: SO_0000673
so part of: HB778_RS40395
location: 571227..573134
location: region:571227-573134:1
so has part: feature:571227-573134:1:exon

WP_183465680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571227-573134:1:exon

HB778_RS40400
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40400
old locus tag: HB778_40550
pseudo: true
so part of: sequence
location: complement(<573518..573640)
location: region:573518-573640:-1
so has part: feature:573518-573640:-1:exon
subclass of: SO_0000010

position:573518:-1
position: 573518
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:573640:-1
position: 573640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573518-573640:-1:exon

HB778_RS40400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40400
old locus tag: HB778_40550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014530888.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sulfite exporter TauE/SafE family protein
SIO_010081: HB778_RS40400
subclass of: SO_0000673
so part of: HB778_RS40400
location: complement(<573518..573640)
location: region:573518-573640:-1
so has part: feature:573518-573640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573518-573640:-1:exon

HB778_RS40405
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: groL
locus tag: HB778_RS40405
old locus tag: HB778_40555
so part of: sequence
location: complement(573800..575455)
location: region:573800-575455:-1
so has part: feature:573800-575455:-1:exon
subclass of: SO_0000010

position:573800:-1
position: 573800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575455:-1
position: 575455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573800-575455:-1:exon

HB778_RS40405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: groL
locus tag: HB778_RS40405
old locus tag: HB778_40555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006643166.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MAVKDVKFSRDARERMLRGINILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELSDKFENMGAQMIREVASKTNDIAGDGTTTATVLAQSIVQEGHKAVAAGMNPMDLKRGIDLAVTEVVAHLVKNAKKIKTSEEVAQVGTIAGNGDASVGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYQSPYFVTNADKMVAELEDVYILLHEKKLSNLQAMLPVLEAVVQTSKPLLIISEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQVISEDLGIKLENVGLNMLGRAKKVSISKENTTIVDGAGKKAEIQGRVAQIKQQIEETTSDYDKEKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVDDALNATRAAVEEGIVAGGGVALLRASLAITVTGANADQTAGIAIVRRALQAPARQIAANAGAEASIVAGKILDNKDATFGYNAQTGEYGDMIAMGIVDPMKVVRTALQDAASVAGLLVTTEAMIAEAPKKDSAGGGMPGGMPGGGMGGMGGMDF
SIO_010081: HB778_RS40405
subclass of: SO_0000673
so part of: HB778_RS40405
location: complement(573800..575455)
location: region:573800-575455:-1
so has part: feature:573800-575455:-1:exon

WP_183465681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573800-575455:-1:exon

HB778_RS40410
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: groES
locus tag: HB778_RS40410
old locus tag: HB778_40560
so part of: sequence
location: complement(575520..575816)
location: region:575520-575816:-1
so has part: feature:575520-575816:-1:exon
subclass of: SO_0000010

position:575520:-1
position: 575520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575816:-1
position: 575816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575520-575816:-1:exon

HB778_RS40410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: groES
locus tag: HB778_RS40410
old locus tag: HB778_40560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018427182.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MAKSNFRPLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEIIAIGSGARDEAGKLVPLDVKAGDRILFGKWSGTEVKLNGEDLLIMKEADIMGIIG
SIO_010081: HB778_RS40410
subclass of: SO_0000673
so part of: HB778_RS40410
location: complement(575520..575816)
location: region:575520-575816:-1
so has part: feature:575520-575816:-1:exon

WP_123150803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575520-575816:-1:exon

HB778_RS42660
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42660
old locus tag: HB778_40565
so part of: sequence
location: complement(576971..577162)
location: region:576971-577162:-1
so has part: feature:576971-577162:-1:exon
subclass of: SO_0000010

position:576971:-1
position: 576971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577162:-1
position: 577162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576971-577162:-1:exon

HB778_RS42660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42660
old locus tag: HB778_40565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838334.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSDFSAARVHLDRAYHYLRGDDPMSRRGREALDLLIEAVAAEEFKQPRQNAQVLTFPIGRRF
SIO_010081: HB778_RS42660
subclass of: SO_0000673
so part of: HB778_RS42660
location: complement(576971..577162)
location: region:576971-577162:-1
so has part: feature:576971-577162:-1:exon

WP_244662151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576971-577162:-1:exon

HB778_RS42665
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS42665
pseudo: true
so part of: sequence
location: 577879..>578293
location: region:577879-578293:1
so has part: feature:577879-578293:1:exon
subclass of: SO_0000010

position:577879:1
position: 577879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578293:1
position: 578293
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577879-578293:1:exon

HB778_RS42665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS42665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_028714619.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HB778_RS42665
subclass of: SO_0000673
so part of: HB778_RS42665
location: 577879..>578293
location: region:577879-578293:1
so has part: feature:577879-578293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577879-578293:1:exon

HB778_RS40420
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
gene: aepX
locus tag: HB778_RS40420
old locus tag: HB778_40575
so part of: sequence
location: 578690..579766
location: region:578690-579766:1
so has part: feature:578690-579766:1:exon
subclass of: SO_0000010

position:578690:1
position: 578690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579766:1
position: 579766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578690-579766:1:exon

HB778_RS40420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
gene: aepX
locus tag: HB778_RS40420
old locus tag: HB778_40575
EC number: 5.4.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872070.1
GO function: GO:0050188 - phosphoenolpyruvate mutase activity [Evidence IEA]
GO process: GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate mutase
translation: MSKAISFGAEVLPVTASSTTLRELILSNDLTFLMEAHDGLSAAIAERAGFRGLWASGLSIASALGYRDANEASWTQVVDVVERMVDATNIPVLVDGDSGFGNFNNARLVARKLEQRGASGVCLEDKGFPKSNSFVGDRHPLADIDEFSGRLKAVKDTTDPNFVVVARIEALIAGHSLDEALCRADAYSEAGADAILIHSRQAVADEILTFAKEWNNKLPVVIVPTKYYNTPASVYRDAGISTVIWANHSMRAAIAGMRDTCGRIRSEESIAGIEDQVAGLDELFSLMGYDELAQAEEQYLPKRTAERRPSDSDQLSNRQLAQEGGTSRVRPHHSGREHCRIEGEVATLDELFELMNYG
SIO_010081: HB778_RS40420
subclass of: SO_0000673
so part of: HB778_RS40420
location: 578690..579766
location: region:578690-579766:1
so has part: feature:578690-579766:1:exon

WP_244662152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578690-579766:1:exon

HB778_RS40425
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40425
old locus tag: HB778_40580
so part of: sequence
location: 579839..581026
location: region:579839-581026:1
so has part: feature:579839-581026:1:exon
subclass of: SO_0000010

position:579839:1
position: 579839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581026:1
position: 581026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579839-581026:1:exon

HB778_RS40425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40425
old locus tag: HB778_40580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006333830.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
translation: MLASRTNLFKSSGTAAARAAAKAAADAGMEIVDLTAGEIWSDLAPTIRDGAIEAIQQGLNRYTDTIGLMELREALARKISLETSQVWQADEIAVTAGAKQALFNTAMVLVNPGDEVIVPVPYWTTFPAQLLIAGGIPVFVDTRDSAYVPRPSDIERVITPRTRAIVVNTPNNPTGSVYDRETLQALAELSIAKDLWLIFDECYGAFAHDPHIHHPIVSLVPEVRPRTIIINAFSKTLALTGWRIGYLAAPKELVSAVKALQSHTTSNPNVIAQHAVLSHLERNDGTYEAQLRAQLTAARRRGLDILSSLASVPAPAAQGGFYFYLDLSNQVAGDNPVHNAMIADRFAHRLLAEHGVAAVSGSAFGDPFGVRLSYGVPPDQLAIGLDRLVQMLVIA
SIO_010081: HB778_RS40425
subclass of: SO_0000673
so part of: HB778_RS40425
location: 579839..581026
location: region:579839-581026:1
so has part: feature:579839-581026:1:exon

WP_183465683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:579839-581026:1:exon

HB778_RS40430
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40430
old locus tag: HB778_40585
so part of: sequence
location: 581023..581850
location: region:581023-581850:1
so has part: feature:581023-581850:1:exon
subclass of: SO_0000010

position:581023:1
position: 581023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581850:1
position: 581850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581023-581850:1:exon

HB778_RS40430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40430
old locus tag: HB778_40585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010915882.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphocholine cytidylyltransferase family protein
translation: MMPETMMPKPNIPQQAVILAAGYGSRLRPFTDYRPKPLVEVNGVAILHNALAHLDALGVREVTIVVGYRKDAIEYACGSQFGGLQIRYVESTVFATTGSAWSLWLAREALLAGDLFLLEGDVFFERAAIERLAWHPAPDVAAVAPFTELMEGSAVVIDEGGAIHEVRMKQTAADLRRPGPPVFKTMNLLRFSAQTLRDKIVPALDAYADAGHANVYTEQMLAQLIADAGLALAAARCDDLRWYEIDTADDLRIAEGMFSKPALRSASAGHIEVIR
SIO_010081: HB778_RS40430
subclass of: SO_0000673
so part of: HB778_RS40430
location: 581023..581850
location: region:581023-581850:1
so has part: feature:581023-581850:1:exon

WP_244662153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581023-581850:1:exon

HB778_RS40435
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40435
old locus tag: HB778_40590
so part of: sequence
location: 581861..582469
location: region:581861-582469:1
so has part: feature:581861-582469:1:exon
subclass of: SO_0000010

position:581861:1
position: 581861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582469:1
position: 582469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581861-582469:1:exon

HB778_RS40435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40435
old locus tag: HB778_40590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017268675.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-alcohol phosphatidyltransferase family protein
translation: MIRHLLDPANAITAGGIVLSMIAMGQNILGVPELGAAIALWALLADHLDGIVAKRTKGRQAETAEIGKNLDSLADLVSAGIFPAITILGIAQATPTTIATASLLVLSSALRLAYFNVNGSPGGRSTGLPTTYAVPVTAIVLLCRPFIPDTYFSTVLAASLLAVACLQVAPLQVPKTAGIGYLLVSLFCVATSLALLARVGMA
SIO_010081: HB778_RS40435
subclass of: SO_0000673
so part of: HB778_RS40435
location: 581861..582469
location: region:581861-582469:1
so has part: feature:581861-582469:1:exon

WP_183465684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581861-582469:1:exon

HB778_RS40440
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40440
old locus tag: HB778_40595
so part of: sequence
location: 582469..583602
location: region:582469-583602:1
so has part: feature:582469-583602:1:exon
subclass of: SO_0000010

position:583602:1
position: 583602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582469-583602:1:exon

HB778_RS40440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40440
old locus tag: HB778_40595
inference: COORDINATES: protein motif:HMM:NF012382.2
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLP-dependent aminotransferase family protein
translation: MANARSSASVIDLTTALPASASALDDALADALRRLAATDGCGELIRRNRIRGFDRDAQLGARWLSTRLGRDLDPAQIVLTNGTQSALSLLFSALVPSGGALVTESLTYAVLRQIGNRAGLRLRGVALDEEGMIPEALEEAFADLPGPRILFCNPTVHNPTTAVMGIGRRQSIVDVCRRHGVAIIEDDVLGFLHRDAPPPIAAIAPDITWYCMSVSKCLAMGLRMAYLVAPSALSAARVTEPVRRLSSWFPNSLSALIVAQWIESEAATGIAMAMAAEIAKRHQLAAEVLADIAYVTKDGALHIWMPLPAELPRQAFATALEQRAVLIRPADLFSVDDADIPNAVRISLTGPDTGAELKTGLSIVSKTFLGWSRGSAR
SIO_010081: HB778_RS40440
subclass of: SO_0000673
so part of: HB778_RS40440
location: 582469..583602
location: region:582469-583602:1
so has part: feature:582469-583602:1:exon

WP_183465685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582469-583602:1:exon

HB778_RS40445
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40445
old locus tag: HB778_40600
so part of: sequence
location: 583670..584452
location: region:583670-584452:1
so has part: feature:583670-584452:1:exon
subclass of: SO_0000010

position:583670:1
position: 583670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584452:1
position: 584452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583670-584452:1:exon

HB778_RS40445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40445
old locus tag: HB778_40600
inference: COORDINATES: protein motif:HMM:NF013382.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0032259 - methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MTATAVDWGNFSATPQDYAQRPAHAPTLLHTLKLEIADKGFADFVVDLCAGTGNLTATLASLGLGGYAIEPEAEMRREARRLNRDGAFQWRDGYAEATGLPDNTASWILIGNALQFVDAIKALEECSRILKPGGFLTVLWNPRDIRLDAFQREIDQLIREACPAVRHTFTDTEAAIRPVEQSGHFRPYLYCERTDWHEMSVETFMATWRGAHYVPSQIGPQAWRDLLQTIAARASTRDVLRTGWRTRAWTFRATPPDDGN
SIO_010081: HB778_RS40445
subclass of: SO_0000673
so part of: HB778_RS40445
location: 583670..584452
location: region:583670-584452:1
so has part: feature:583670-584452:1:exon

WP_183465686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583670-584452:1:exon

HB778_RS40450
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40450
old locus tag: HB778_40605
so part of: sequence
location: 584488..585306
location: region:584488-585306:1
so has part: feature:584488-585306:1:exon
subclass of: SO_0000010

position:584488:1
position: 584488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585306:1
position: 585306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584488-585306:1:exon

HB778_RS40450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40450
old locus tag: HB778_40605
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF024880.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MTQHQSVAPAPDDLFEGAAYYFARYQAYYPATMFEFLAGNYLVDPSADDLLDLGCGTGQFAVPLSKFARHVVAVDPDSGMIAEARRLAEANDAANITFLSGRSEELLPELGSFSLVTIAGAFHWMDRETVLAKLSAKVSDQGAIAIISRVRTNCEPRDWFSEQLRYIEDFWGGHFPAGKDGIRPTLAESNEAILRRSAFRNVQRQNFSYEHRWDIDSLMGYILSTSKACPGVLGDRRSEFELGMRSHLLAMSPAGSFIERGNAEVLLARRRG
SIO_010081: HB778_RS40450
subclass of: SO_0000673
so part of: HB778_RS40450
location: 584488..585306
location: region:584488-585306:1
so has part: feature:584488-585306:1:exon

WP_183465687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584488-585306:1:exon

HB778_RS40455
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40455
old locus tag: HB778_40610
so part of: sequence
location: complement(585286..586185)
location: region:585286-586185:-1
so has part: feature:585286-586185:-1:exon
subclass of: SO_0000010

position:585286:-1
position: 585286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586185:-1
position: 586185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585286-586185:-1:exon

HB778_RS40455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40455
old locus tag: HB778_40610
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLALSYPSDHPVFPRPDVALTTTMWAAAAATITADIIAKRSLPPDVLLMGWSMAGRASRAFTRAAESHGLAVRGFISLAATPPLPRFADTPPQGQPFTEDGLWKTDGRLGDAQPQHELYLNDIHWRNGGREYDLIAAADYFGAYTTNTPILLRGEPEQGSGLSGNSLVETITDLGSFDFSGYPITGAIMPTSPLDARHVVTDQATWAFLNSQKLYSVYEALARAGASIGSDDVWNSILDVKFAMETTLSCSVEGGHFFFIGREGAMQTAAHISRLSAALDAIRSRLQALGGASSSPPPC
SIO_010081: HB778_RS40455
subclass of: SO_0000673
so part of: HB778_RS40455
location: complement(585286..586185)
location: region:585286-586185:-1
so has part: feature:585286-586185:-1:exon

WP_183465688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:585286-586185:-1:exon

HB778_RS40460
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40460
old locus tag: HB778_40615
so part of: sequence
location: complement(586519..587724)
location: region:586519-587724:-1
so has part: feature:586519-587724:-1:exon
subclass of: SO_0000010

position:586519:-1
position: 586519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587724:-1
position: 587724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586519-587724:-1:exon

HB778_RS40460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40460
old locus tag: HB778_40615
inference: COORDINATES: protein motif:HMM:NF024808.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MSGAASAAPITLQVDATPSIFAEMFQNLVKAFEVENPDVKINLDLTQRDQTDATQSVLRKGLVGQLPDISFQSFNYLKLLDDQGYVAPVGDFIKSDTSWSTDFSPSVTQATTINGKVLGLSVAFSFPVVFYNKELVAEAQNGDGTLPGTWDGILGVAKAIQQQHPDVLGAYTRYNSFVGQGFILSQGAEVGNAAGTEVAFANDAGRHAFDLFRQFGEAGQAKVDMTDEQARQAFSGGKIAILVDSSSSLESFQRAAQGHFEIGTIRFPFANDSGKIPTAGIAVLLHARDDDRAKAAWRFMRFVSSPKAQVIVGKSTGYVPANNVAVETADLLGQYYKDRPAMSAALDSSAYAAPWYAFNGTGAARIDQLFLDSARQVVTLRQSPADAVADLQNKIPGMVGE
SIO_010081: HB778_RS40460
subclass of: SO_0000673
so part of: HB778_RS40460
location: complement(586519..587724)
location: region:586519-587724:-1
so has part: feature:586519-587724:-1:exon

WP_183465689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586519-587724:-1:exon

HB778_RS40465
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40465
old locus tag: HB778_40620
so part of: sequence
location: complement(587876..588508)
location: region:587876-588508:-1
so has part: feature:587876-588508:-1:exon
subclass of: SO_0000010

position:587876:-1
position: 587876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588508:-1
position: 588508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587876-588508:-1:exon

HB778_RS40465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40465
old locus tag: HB778_40620
inference: COORDINATES: protein motif:HMM:NF015297.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldolase/citrate lyase family protein
translation: MAECGFDAVLIDCEHGAIGPERAEEMARAANLSGIVSILRPEDPSPWMVTKYLECGVDGLMIPLVPDATVAKAIVDRFRFSAPFDHQDRVLILMIETIEAVRNLEEIMAVDGVDAYFVAPGDLALTIGETPITYRWQKGDKPKAVADAVDGAINTIVGSGRACGTLVNHDDVAEFMGKGVRLFYDHANHMLAHGASDFHRRIESARRASK
SIO_010081: HB778_RS40465
subclass of: SO_0000673
so part of: HB778_RS40465
location: complement(587876..588508)
location: region:587876-588508:-1
so has part: feature:587876-588508:-1:exon

WP_244662154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587876-588508:-1:exon

HB778_RS40470
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40470
old locus tag: HB778_40625
so part of: sequence
location: complement(588787..589623)
location: region:588787-589623:-1
so has part: feature:588787-589623:-1:exon
subclass of: SO_0000010

position:588787:-1
position: 588787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589623:-1
position: 589623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588787-589623:-1:exon

HB778_RS40470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40470
old locus tag: HB778_40625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017268684.1
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MSIHVPMRPALFLRHAALLMTSAIILLPFIWMVSLSIKPPGEMFGDHFSFLPTQFYGVENYTQALTRVPLLRYMLNGVIVCTAILTLQILVCAPMAYVLAKMRFPGRELIFALVLIALLLPHEVLALPLFIFASKVGILNSYAALVLPYIVSPFGIFLFRQFFKAIPDDVVHAARLDGLSEFAIIWKIMVPMTMPAVVAFSIFSVVGHWNSLFWPLIAVNDDSLLPPPVGIIAFKNQDVGVDYGPLMAAATIVVLPLIVAFLSSQRLFIESITRGAIK
SIO_010081: HB778_RS40470
subclass of: SO_0000673
so part of: HB778_RS40470
location: complement(588787..589623)
location: region:588787-589623:-1
so has part: feature:588787-589623:-1:exon

WP_183465691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588787-589623:-1:exon

HB778_RS40475
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40475
old locus tag: HB778_40630
so part of: sequence
location: complement(589620..590504)
location: region:589620-590504:-1
so has part: feature:589620-590504:-1:exon
subclass of: SO_0000010

position:589620:-1
position: 589620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590504:-1
position: 590504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589620-590504:-1:exon

HB778_RS40475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40475
old locus tag: HB778_40630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017270616.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MRNHKLAETLAAWSLAAPALVLLVALFFLPVLAVFAVALTNWHFGARTLSFVGVDNFEQVFADDGFRASLINTLVYVATVVPGTIMFGLGIALLIESGKSLRAFYRAIHFVPYMATLAAMAIAWEALLHPTIGLVNQSLASLGLPTSNWLRDENTVLPVLAVIGIWQNLGFAMVLFLAGLKAIPQDLYDAADIDGADLWLDRLRTVTLPMLGPVSMFVFIVVALRAFETFDTVEVLTQGGPGHASEMLLFTLYRESFVYLRTGYGASVAVVFLIIVVALTLLQARVMDKRVHYQ
SIO_010081: HB778_RS40475
subclass of: SO_0000673
so part of: HB778_RS40475
location: complement(589620..590504)
location: region:589620-590504:-1
so has part: feature:589620-590504:-1:exon

WP_244662212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589620-590504:-1:exon

HB778_RS40480
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40480
old locus tag: HB778_40635
so part of: sequence
location: complement(590570..591745)
location: region:590570-591745:-1
so has part: feature:590570-591745:-1:exon
subclass of: SO_0000010

position:590570:-1
position: 590570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591745:-1
position: 591745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590570-591745:-1:exon

HB778_RS40480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40480
old locus tag: HB778_40635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872089.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSAITIEKIEKTFGATPVLRDVSLKIADGEFLTLLGPSGCGKSTLLRILAGLEVQTGGSISIGERVVDGVRPKRRDVAMVFQSYALYPHMTVAQNMALPLRMRRLSAWQRLSMVGGLLPGTKAVSAEIELEVMRTAKALGIGHLLARKPGQLSGGQRQRVAVGRAMVREPAVFLMDEPLSNLDAKLRVQMRAEIKELHNRLGVTFVYVTHDQSEAMTMSDRVAVMLDGELLQVAPPQEIYDDPDDRRVAEFIGSPKINMLDARLREHGLADTAGTSFCIAGNIGPGIALTLGIRPEAFHLVDAGGPNVLTGAVRLVEHMGSDLFVHLNVPGTDHPVIARLLAERAPQIGSGQTLHLGVKPERLLLFFADGRRLRAHDHAGATVLRMKECVQ
SIO_010081: HB778_RS40480
subclass of: SO_0000673
so part of: HB778_RS40480
location: complement(590570..591745)
location: region:590570-591745:-1
so has part: feature:590570-591745:-1:exon

WP_183465693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:590570-591745:-1:exon

HB778_RS40485
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40485
old locus tag: HB778_40640
so part of: sequence
location: 591911..592822
location: region:591911-592822:1
so has part: feature:591911-592822:1:exon
subclass of: SO_0000010

position:591911:1
position: 591911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592822:1
position: 592822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591911-592822:1:exon

HB778_RS40485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40485
old locus tag: HB778_40640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018325600.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MTEEKDLSLNAVRAFVQVARDNSVTRASKTLGITQSSVSRHLAVLEEYFGAKLLERFGRQSQLTDFGRLFADAVAEPLDTILFTAKRMRRSDRKDVNRLVVRTSLSTFAYTVLIPNLREFSKEMSGVTVDVISTLSAPASTDSFDVLLTRDLMLTEPADRWDVYDEQLVCVGAPDCVAGRGLKALRSTPIIAVTSRPDILPTWLRGMNLKTSDITSGARYDHHYLALPAVTTGQSLLVTPHIVVAELIRQGLLEVLAGSRAPSGMQYRAYAIDSSDNPDVARAFCRWLTRLCRKMTEEDVPTK
SIO_010081: HB778_RS40485
subclass of: SO_0000673
so part of: HB778_RS40485
location: 591911..592822
location: region:591911-592822:1
so has part: feature:591911-592822:1:exon

WP_183465694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591911-592822:1:exon

HB778_RS40490
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40490
old locus tag: HB778_40645
so part of: sequence
location: 592945..594183
location: region:592945-594183:1
so has part: feature:592945-594183:1:exon
subclass of: SO_0000010

position:592945:1
position: 592945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594183:1
position: 594183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592945-594183:1:exon

HB778_RS40490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40490
old locus tag: HB778_40645
EC number: 2.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018325599.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal phosphate-dependent aminotransferase
translation: MSLIAKRLQAVRPSQTKAMTAAAAALREKGIDVIALSQGEPDFDTPDVVQRAGIAAIREGKTRYTPVAGVKPLREVIRQKLLHDNSLDYDIDAITVGCGAKQVVFNALFASLDPGDEVIIPTPCWVSYPDMVRLAGGELVLVACHERFGFKLKPQDLEAAMTPRTKWLMLNSPNNPTGAVYSKAELAALAVVLRRHPQVHVLADDIYEKLVYGVRFATMAEAAPDLIGRTLTVNGVSKSSAMTGWRLGYGAGPKDLIKAMNTIQGQTSSHTSSISQYAAIEAIGGNQDYIDDFVSSFRKRRDLVVEKINEAQGLKCRTPDGAFYVFVNCAGVIGKTSPQGKVIETDMAFAMYLLEHFGVAVVPGSGFMASPYIRISYAASIEDLQHACDRILAACEALSESESIYEQSKATA
SIO_010081: HB778_RS40490
subclass of: SO_0000673
so part of: HB778_RS40490
location: 592945..594183
location: region:592945-594183:1
so has part: feature:592945-594183:1:exon

WP_183465915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592945-594183:1:exon

HB778_RS40495
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40495
old locus tag: HB778_40650
so part of: sequence
location: 594158..595030
location: region:594158-595030:1
so has part: feature:594158-595030:1:exon
subclass of: SO_0000010

position:594158:1
position: 594158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595030:1
position: 595030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594158-595030:1:exon

HB778_RS40495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40495
old locus tag: HB778_40650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isocitrate lyase/phosphoenolpyruvate mutase family protein
translation: MSKAKQLRDRMAERGLVHIMAAHSPLSAILAEEAGFDGLWASGFELSALYGLADMSLITMTQHLDMLRAIAGQSSLPIVADIDTGYGNAVNVIHAIREYEKAGTAAVVIEDKTFPKVTSLAATGRQELLRIEEFQGKIEAAVSTRSDPDFLVIARTEALIAGLDEAEALKRGMAYVEAGADMILIHSKKKDPAEIESFSRAWKGIVPLVIVPNAYPELDGTRIRALANIQMTVYGNYGIRAATTAMQDAFRRIIADGGVQNVHKDIVSVEEIFRLQKMDKVKGDEKCFLR
SIO_010081: HB778_RS40495
subclass of: SO_0000673
so part of: HB778_RS40495
location: 594158..595030
location: region:594158-595030:1
so has part: feature:594158-595030:1:exon

WP_183465695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594158-595030:1:exon

HB778_RS40500
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40500
old locus tag: HB778_40655
so part of: sequence
location: complement(595127..595708)
location: region:595127-595708:-1
so has part: feature:595127-595708:-1:exon
subclass of: SO_0000010

position:595127:-1
position: 595127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595708:-1
position: 595708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595127-595708:-1:exon

HB778_RS40500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40500
old locus tag: HB778_40655
inference: COORDINATES: protein motif:HMM:NF033564.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MPKKTFAVALATGNHLLVQLKENQPNLDDEIRAIVDSRTPSDTASSRDTVRSRQEDRTVDVFPVGKALVDSEWQPFVKTIIRVTRQTWLRSAATGMWQPRGEVSYYISSEQGLPAKTWAAIIRGHWGIENRNHYVRDVSCDEDRSRIRDNPGIMARARSFALNILRHNGTKNVAQALWNGALSLDLILAYKAL
SIO_010081: HB778_RS40500
subclass of: SO_0000673
so part of: HB778_RS40500
location: complement(595127..595708)
location: region:595127-595708:-1
so has part: feature:595127-595708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:595127-595708:-1:exon

HB778_RS40505
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40505
old locus tag: HB778_40660
so part of: sequence
location: complement(595668..596282)
location: region:595668-596282:-1
so has part: feature:595668-596282:-1:exon
subclass of: SO_0000010

position:595668:-1
position: 595668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596282:-1
position: 596282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595668-596282:-1:exon

HB778_RS40505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40505
old locus tag: HB778_40660
inference: COORDINATES: protein motif:HMM:NF033564.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MRVAPLPGTLLSLFSQIPDPRRGQGQMYPQAPILLFTVLAMLAGAVSYRQVHAFIRIHLVRLNGVFGVSVRKAPAYSTVRFILRGLDGAEVERVFRQHAAGLPTPPAQEPDDAMPDDVMPACVAIDGKTLRGSFDAFNDRKAAHLLSAFASDGQIILGHLAIDEKSNEIPAAQDLIATLGLTGRMFTLDAMHAQKNLRRSPGHG
SIO_010081: HB778_RS40505
subclass of: SO_0000673
so part of: HB778_RS40505
location: complement(595668..596282)
location: region:595668-596282:-1
so has part: feature:595668-596282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:595668-596282:-1:exon

HB778_RS40510
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40510
old locus tag: HB778_40665
so part of: sequence
location: 596602..596847
location: region:596602-596847:1
so has part: feature:596602-596847:1:exon
subclass of: SO_0000010

position:596602:1
position: 596602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596847:1
position: 596847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596602-596847:1:exon

HB778_RS40510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28104
locus tag: HB778_RS40510
old locus tag: HB778_40665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012564805.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRIADTKTLAGELRSRYDPPRAVTIMGRLLLKALFAGLSDEVVFWALVHAHYRGGDLCAPVEEQLAAFSEFILRDESESN
SIO_010081: HB778_RS40510
subclass of: SO_0000673
so part of: HB778_RS40510
location: 596602..596847
location: region:596602-596847:1
so has part: feature:596602-596847:1:exon

WP_183455128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596602-596847:1:exon

HB778_RS40515
type: Gene
subclass of: SO_0000704
RO_0002162: 28104
locus tag: HB778_RS40515
old locus tag: HB778_40670
so part of: sequence
location: complement(596870..597556)
location: region:596870-597556:-1
so has part: feature:596870-597556:-1:exon
subclass of: SO_0000010

position:596870:-1
position: 596870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597556:-1
position: 597556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596870-597556:-1:exon