Legionella anisa isolate UMCG_3A plasmid p3A2, complete sequence.
type: Entry
definition: Legionella anisa isolate UMCG_3A plasmid p3A2, complete sequence.
sequence version: NZ_CP029565.1
sequence date: 2022-12-08
sequence: sequence
division: CON
label: NZ_CP029565.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN09241230
keyword: RefSeq
source: Legionella anisa
organism: Legionella anisa
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP029565.1.\nBacteria and source DNA available from University Medical Center\nGroningen, Medical Microbiology Department, Molecular Unit Research\nLab, PI J.W.A. Rossen.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: JAN-2018\nAssembly Method :: Hybrid assembly v. Unicycler v0.4.1\nAssembly Name :: UMCG_Lani3A\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 76.0x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 02:50:16\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,856\nCDSs (total) :: 3,800\nGenes (coding) :: 3,748\nCDSs (with protein) :: 3,748\nGenes (RNA) :: 56\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 43\nncRNAs :: 4\nPseudo Genes (total) :: 52\nCDSs (without protein) :: 52\nPseudo Genes (ambiguous residues) :: 0 of 52\nPseudo Genes (frameshifted) :: 20 of 52\nPseudo Genes (incomplete) :: 27 of 52\nPseudo Genes (internal stop) :: 12 of 52\nPseudo Genes (multiple problems) :: 7 of 52\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 48353
topology: circular
so has quality: SO_0000988
location: 1..48353
location: region:1-48353:1
RO_0002162: 28082

NZ_CP029565
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN09241230
type: BioSample
SIO_000068: biosample

1
title: Detection of Legionella anisa in water from hospital dental unit and molecular characterization by whole-genome sequencing
author: Fleres, G.
journal: Unpublished

2
title: Direct Submission
author: Fleres, G.
journal: Submitted (23-MAY-2018) Medical Microbiology, UMCG, Hanzeplein 1, Groningen 9713 GZ, Netherlands

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48353:1
position: 48353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-48353:1:source
so part of: sequence
organism: Legionella anisa
mol type: genomic DNA
isolate: UMCG_3A
isolation source: dental water pipeline
plasmid: p3A2
country: Netherlands: Groningen
collection date: 2017-06-23

28082
type: Taxonomy
SIO_000068: taxonomy

DLD14_RS19170
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19170
old locus tag: DLD14_19170
so part of: sequence
location: 15..1064
location: region:15-1064:1
so has part: feature:15-1064:1:exon
subclass of: SO_0000010

position:15:1
position: 15
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064:1
position: 1064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15-1064:1:exon

DLD14_RS19170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19170
old locus tag: DLD14_19170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ParA family protein
translation: MEQISWTNSDIRKLFKMDNRFKSIQTLYNAEDRGEIPVAGREPRGKVSTRIWKLDQLPEIGKRFGFLKPPTEQKVLCTYMQKGGVYKTTTSYNRARTLALNGMKVLLIGLDPECSVTDIIIPQQELNRLDDFEQGIGLFHYFVENAQLKDIIRPTSLPTLDFIPETHDLVKLNKWMTHEKRREYIFQDKLIPHLSNYDVIIFDNSPTWNHLVENSILVSSAVIMPLGCTLLAYNASATNMQNIWDFQEVMKLTDQKLVMFSTALERSSLSQQINATYLTRYVDYMITTPIRKSVKWEEALMSQQTILEYALGSPQAEEYYHLISEEWARINGGRDKFVELNLTNELEVV
SIO_010081: DLD14_RS19170
subclass of: SO_0000673
so part of: DLD14_RS19170
location: 15..1064
location: region:15-1064:1
so has part: feature:15-1064:1:exon

WP_019233025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15-1064:1:exon

DLD14_RS19175
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19175
old locus tag: DLD14_19175
so part of: sequence
location: 1064..1783
location: region:1064-1783:1
so has part: feature:1064-1783:1:exon
subclass of: SO_0000010

position:1783:1
position: 1783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064-1783:1:exon

DLD14_RS19175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19175
old locus tag: DLD14_19175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIKKGAFELYTQERKLPDKRTSSSGKKNHFFDDIDKESNGTQTVHNQFTNGSSQVIVDDCNLLQNQSEQLETNPILDGECNADDTLNKPRKLNLGSFDNSPQTVHKRFTSDRSEVEITTDKLLSLKSNAKQHNHEKKLLTSFSKIIGNQREIVIALYKNIRLNKSDMTEELTLETIATLTGINPKSLKNTLFRLTSAGVIIRADQKVGRGGWVKYQINSEIIEQIQQADFLTFTKIKR
SIO_010081: DLD14_RS19175
subclass of: SO_0000673
so part of: DLD14_RS19175
location: 1064..1783
location: region:1064-1783:1
so has part: feature:1064-1783:1:exon

WP_019233024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1064-1783:1:exon

DLD14_RS19180
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19180
old locus tag: DLD14_19180
so part of: sequence
location: complement(1822..2664)
location: region:1822-2664:-1
so has part: feature:1822-2664:-1:exon
subclass of: SO_0000010

position:1822:-1
position: 1822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2664:-1
position: 2664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1822-2664:-1:exon

DLD14_RS19180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19180
old locus tag: DLD14_19180
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF024880.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MISHIYRNPNKYSKNNALQYNFAMKLLSKISFNNQSRVLDVGCGDGVITNEIAGIVHEGCVIGTDISEQMIEFASKKYADQYNLRFLAMDASKNIFREQFDIITSFNCLHWVKDQQNALFGIARSAVYGAQVALLLSHKKSLYHLVLDKICSSSKWKDYFTDFISPRSFFDPLDYKEMVVRSGLDVIEISEEEMTYSFKSKEQLKDFFNAAGSQIKQIPEAKKSDFLNDFIDEYLKEASFSEETLIPVSFWCLQVIATKPKPKLIKTSELDNRSTLFSKL
SIO_010081: DLD14_RS19180
subclass of: SO_0000673
so part of: DLD14_RS19180
location: complement(1822..2664)
location: region:1822-2664:-1
so has part: feature:1822-2664:-1:exon

WP_019233023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1822-2664:-1:exon

DLD14_RS19185
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19185
old locus tag: DLD14_19185
so part of: sequence
location: 2803..3336
location: region:2803-3336:1
so has part: feature:2803-3336:1:exon
subclass of: SO_0000010

position:2803:1
position: 2803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3336:1
position: 3336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2803-3336:1:exon

DLD14_RS19185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19185
old locus tag: DLD14_19185
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVLSIISSIIKEIKSPAFKIESDDEDPKTGLIFVWVKIENKSVLPMKKDPIELLREARSKNCFSKKDYDWIIDVMLENQKRLIENKFKKNFSLIKHQFSEQLEEPLVVYKDLTNKIYIKPAKEIYSSIEKLKKFNSEDSACIGNIVGSHEAEQEYRLRNQCKNSNVIKFDTSLLSR
SIO_010081: DLD14_RS19185
subclass of: SO_0000673
so part of: DLD14_RS19185
location: 2803..3336
location: region:2803-3336:1
so has part: feature:2803-3336:1:exon

WP_019233022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2803-3336:1:exon

DLD14_RS19190
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19190
old locus tag: DLD14_19190
so part of: sequence
location: complement(3305..4072)
location: region:3305-4072:-1
so has part: feature:3305-4072:-1:exon
subclass of: SO_0000010

position:3305:-1
position: 3305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4072:-1
position: 4072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3305-4072:-1:exon

DLD14_RS19190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19190
old locus tag: DLD14_19190
inference: COORDINATES: protein motif:HMM:NF014631.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VUT family protein
translation: MILKNKIGIFLKTHFFKKISDYFANIDKGAYLVLIGMLYATIFFCSFVMGYKTVDLYGRILCSSVFIFPLLFPINDSITELLGAKVSYLMIVAIIFCEFMFSFITHALAILPSPSHWQNQEIYPLLTTGFIHIAIADSISLAIGFFANTYVLDKWGMKWFGSGFFRRSLGATAVGELLFTISTNLITFHMLSTANLMDTTNIIISDYILKMAYSFIICIPNAYLVSLIKKHIQKEDIIKDRKIIPLNGIRVRYRT
SIO_010081: DLD14_RS19190
subclass of: SO_0000673
so part of: DLD14_RS19190
location: complement(3305..4072)
location: region:3305-4072:-1
so has part: feature:3305-4072:-1:exon

WP_019233021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3305-4072:-1:exon

DLD14_RS19195
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19195
old locus tag: DLD14_19195
so part of: sequence
location: complement(4056..4715)
location: region:4056-4715:-1
so has part: feature:4056-4715:-1:exon
subclass of: SO_0000010

position:4056:-1
position: 4056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4715:-1
position: 4715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4056-4715:-1:exon

DLD14_RS19195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19195
old locus tag: DLD14_19195
inference: COORDINATES: protein motif:HMM:NF012920.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S24 family peptidase
translation: MSISNVLSELLKKYNLNALELERLTGVPSSTIYRLLKDKDGNPTIEVLKKLASFFQITVSQLIGEDPFGCKQIPLVQPSAIFSFITSAQARKDELDSVPIDFPLSDKCFATLSQDNMMEPFILVNSIVIVDPERDITNKDFVLLIKSRDDKPIIRQIISDGDDFYLKVLNSNFPVELKKVDLKDYTFIGVIVHYRTNLFDFCLSNSNKDYDGLIYDFKK
SIO_010081: DLD14_RS19195
subclass of: SO_0000673
so part of: DLD14_RS19195
location: complement(4056..4715)
location: region:4056-4715:-1
so has part: feature:4056-4715:-1:exon

WP_019233020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4056-4715:-1:exon

DLD14_RS19200
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19200
old locus tag: DLD14_19200
so part of: sequence
location: 4914..5156
location: region:4914-5156:1
so has part: feature:4914-5156:1:exon
subclass of: SO_0000010

position:4914:1
position: 4914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5156:1
position: 5156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4914-5156:1:exon

DLD14_RS19200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19200
old locus tag: DLD14_19200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019350373.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraY domain-containing protein
translation: MESEINNKKYPKVFISFQLSEEANKLLTESCERSGRKKIPEAALRLEDHLKRFRSISELNQTTPHQPEAMDADHGRTTNP
SIO_010081: DLD14_RS19200
subclass of: SO_0000673
so part of: DLD14_RS19200
location: 4914..5156
location: region:4914-5156:1
so has part: feature:4914-5156:1:exon

WP_019233019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4914-5156:1:exon

DLD14_RS19205
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19205
old locus tag: DLD14_19205
so part of: sequence
location: 5134..6225
location: region:5134-6225:1
so has part: feature:5134-6225:1:exon
subclass of: SO_0000010

position:5134:1
position: 5134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6225:1
position: 6225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5134-6225:1:exon

DLD14_RS19205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19205
old locus tag: DLD14_19205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019350374.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVLRIHKKQQNFVILDKTCLNDQTLSWGAKGLHAYLISLPDNWKVRVSDLKERARNGRDAVRGLLSELEQAGYIQKVTSRDDASGRFGGVEYLVLEIPEPKNQENNPETKKPYSVKNEQKTPSPENPSLVNPETGNPLPVNPTLININRINNKRLNNKTATADRSISVKELNAKTQAEKAATVFSQSVRHEVMSVEKAELEYNHIDFLSQDDALIGSQLTQSQKQRIRTLVKSLNISQKEALIEEIEFCLINPKHFTACGKDFSRKLNAIRSVILRGDWQTPSGMIQELSIVQNSNDVAVRELEKELREAQAEVVHFKRLLTTAREHTRAHFETIIYQAQNKIKDLEGRIRDFLSQPQEVSC
SIO_010081: DLD14_RS19205
subclass of: SO_0000673
so part of: DLD14_RS19205
location: 5134..6225
location: region:5134-6225:1
so has part: feature:5134-6225:1:exon

WP_019233018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5134-6225:1:exon

DLD14_RS19210
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19210
old locus tag: DLD14_19210
so part of: sequence
location: 6270..7013
location: region:6270-7013:1
so has part: feature:6270-7013:1:exon
subclass of: SO_0000010

position:6270:1
position: 6270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7013:1
position: 7013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6270-7013:1:exon

DLD14_RS19210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19210
old locus tag: DLD14_19210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212604.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: complement resistance protein TraT
translation: MKDNNNIISKTLIVGTIAVLTGCAATQTAIEHGSLQVSTKQSETVFLDPVFNAQKTVYVSVKNTSDEDVDIAPQLKTALSSHGYKVINNPNSAHYLLQANVLKVGKMSVAASQSALGGGYGSAIAGAVAGTAAGSFTQSSTGMIAGGLAGGVIGLAADSLVKDVNYTMITDIQISERVGKGIKVNEQFQSNLKNGRSSVTSQISSRDSQYQRYRTRVVSNADKVNLKFQDARPALEQGLVKVISGIF
SIO_010081: DLD14_RS19210
subclass of: SO_0000673
so part of: DLD14_RS19210
location: 6270..7013
location: region:6270-7013:1
so has part: feature:6270-7013:1:exon

WP_019233017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6270-7013:1:exon

DLD14_RS19215
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19215
old locus tag: DLD14_19215
so part of: sequence
location: 7136..7423
location: region:7136-7423:1
so has part: feature:7136-7423:1:exon
subclass of: SO_0000010

position:7136:1
position: 7136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7423:1
position: 7423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7136-7423:1:exon

DLD14_RS19215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19215
old locus tag: DLD14_19215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019233016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMGKKIGSLIQKGGSVLIFTLLSKGVFANDLLARALEGDVKDSLGSGSMFWKVFILVDIILATAMAVKSKNPMVFVGVTAVAFIPAFLLKTFVF
SIO_010081: DLD14_RS19215
subclass of: SO_0000673
so part of: DLD14_RS19215
location: 7136..7423
location: region:7136-7423:1
so has part: feature:7136-7423:1:exon

WP_019233016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7136-7423:1:exon

DLD14_RS19220
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traL
locus tag: DLD14_RS19220
old locus tag: DLD14_19220
so part of: sequence
location: 7437..7733
location: region:7437-7733:1
so has part: feature:7437-7733:1:exon
subclass of: SO_0000010

position:7437:1
position: 7437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7733:1
position: 7733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7437-7733:1:exon

DLD14_RS19220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traL
locus tag: DLD14_RS19220
old locus tag: DLD14_19220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019233015.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system protein TraL
translation: MSNMNYQFLNHIDAPKRVLTLTIDELVVAGLGFMLLIISNQKILVSMFGLGLLSGLRYLKKGEGPKALLVLAYWYLPSFITQFFLPKLPLSHHRVYVA
SIO_010081: DLD14_RS19220
subclass of: SO_0000673
so part of: DLD14_RS19220
location: 7437..7733
location: region:7437-7733:1
so has part: feature:7437-7733:1:exon

WP_019233015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7437-7733:1:exon

DLD14_RS19225
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traE
locus tag: DLD14_RS19225
old locus tag: DLD14_19225
so part of: sequence
location: 7743..8312
location: region:7743-8312:1
so has part: feature:7743-8312:1:exon
subclass of: SO_0000010

position:7743:1
position: 7743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8312:1
position: 8312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7743-8312:1:exon

DLD14_RS19225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traE
locus tag: DLD14_RS19225
old locus tag: DLD14_19225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019233014.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system protein TraE
translation: MDFKNYQSRLSLLSARFNLMVVLVFGLLVSNVLLSCFLFQAWNHHTIEVTPFNGEPSYLKSASSVDGHYLSLMAENFVNERLNVTPETVDANHQRLLSYVNHQNYTQILRLLTNEAKVIKAKKMSSIFYIDKNKANPHALTVVVSGILKRFVGLQALNDERKTYVLQFQYKDSRLSIVNFSLLKEKQDA
SIO_010081: DLD14_RS19225
subclass of: SO_0000673
so part of: DLD14_RS19225
location: 7743..8312
location: region:7743-8312:1
so has part: feature:7743-8312:1:exon

WP_019233014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7743-8312:1:exon

DLD14_RS19230
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traK
locus tag: DLD14_RS19230
old locus tag: DLD14_19230
so part of: sequence
location: 8305..9024
location: region:8305-9024:1
so has part: feature:8305-9024:1:exon
subclass of: SO_0000010

position:8305:1
position: 8305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9024:1
position: 9024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8305-9024:1:exon

DLD14_RS19230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traK
locus tag: DLD14_RS19230
old locus tag: DLD14_19230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system secretin TraK
translation: MRKPISIALTLLSTLAIGANSIPVKDNSDIALTLSQGNYNRLVVKNDKIMEAVFPPNAMAIKRDEQDGSVYVMLQASNPFTLFLTTENGRHFSVTLNGEESLGKTIELVPSSPIVTASKANSTKTTNTKTITQEAVPEAILAMLTHMEQQKPFADVNVKRQFGKVERWSKGLTLLPKESWDGKLLKGETIELYNGGKEPLELAQEWFAKEGTLAIKFSKPSLVPGEKAMLYRVQGVNHG
SIO_010081: DLD14_RS19230
subclass of: SO_0000673
so part of: DLD14_RS19230
location: 8305..9024
location: region:8305-9024:1
so has part: feature:8305-9024:1:exon

WP_019233013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8305-9024:1:exon

DLD14_RS19235
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19235
old locus tag: DLD14_19235
so part of: sequence
location: 9017..10384
location: region:9017-10384:1
so has part: feature:9017-10384:1:exon
subclass of: SO_0000010

position:9017:1
position: 9017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10384:1
position: 10384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9017-10384:1:exon

DLD14_RS19235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19235
old locus tag: DLD14_19235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212609.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MASWQWNKMVKGRQVRTLIVAGSCLFFLVAMMIVLLADGRPKKTQVLKKSVDLTGIVEESFTDAVADNALTTQQTELESLKKQIGELTQNIKSMGETHQKELQAQKEELTSQVQELVLAHQEKRQEPQNNPQELNQVQNPQLWHNPNTYAMNNIMNGGTVLSDASPRIHTVSFRPKRRSLKTHHNFYLNPAHYVPSNTSVRAVILGGADADASVNGQSKNNGVMLFKFLEDGTLPNGQRSRLRGCRVSANSYGDISSERAYGTLYRLSCAHPGEPIIDKEVTGWVFFNGKVGIKGKPLMRDNKVMTWAGVSGALSGIASAAQYAQSVQAIGPYGATSVVPSSQIAPYAAYGGASKAADTLSQYYVKRAEQYHPVIQVGSGNVVTIVFKDGFYLEPDEDKRQHAMNQVKAQQETHELIASQEDNQNPEMNFTVPPEVLGKIDKANTLSRNETGGLR
SIO_010081: DLD14_RS19235
subclass of: SO_0000673
so part of: DLD14_RS19235
location: 9017..10384
location: region:9017-10384:1
so has part: feature:9017-10384:1:exon

WP_019233012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9017-10384:1:exon

DLD14_RS19240
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19240
old locus tag: DLD14_19240
so part of: sequence
location: 10381..10671
location: region:10381-10671:1
so has part: feature:10381-10671:1:exon
subclass of: SO_0000010

position:10381:1
position: 10381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10671:1
position: 10671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10381-10671:1:exon

DLD14_RS19240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19240
old locus tag: DLD14_19240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010654219.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraV family lipoprotein
translation: MKCPTLSLMPLLALLLTGCGTMNSNFSCNATAGDSCLTIEQVDAMTRFADDVKPAPPRRAKMRAENNFQNFEGKVIKQNNGENVWVAKKVEGQSWA
SIO_010081: DLD14_RS19240
subclass of: SO_0000673
so part of: DLD14_RS19240
location: 10381..10671
location: region:10381-10671:1
so has part: feature:10381-10671:1:exon

WP_019233011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10381-10671:1:exon

DLD14_RS19245
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traC
locus tag: DLD14_RS19245
old locus tag: DLD14_19245
so part of: sequence
location: 10662..13250
location: region:10662-13250:1
so has part: feature:10662-13250:1:exon
subclass of: SO_0000010

position:10662:1
position: 10662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13250:1
position: 13250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10662-13250:1:exon

DLD14_RS19245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traC
locus tag: DLD14_RS19245
old locus tag: DLD14_19245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010654218.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein TraC
translation: MGLTLAAFRDKARNLLHQAATLLGETSGIKPASLHAHDKAHESCALDLPSIKALLPYETVNKRGFFVNRNSMGFGLELLPMAGSDESLMSSLSQLFKNKLSVGTDCTVLLYKHPWLGASLSQNYEPILKQGGIYAELARQTLKYHLNAIKKGYKNGRNVPAGLSDYCCYLFVSRPMQQDVEEQLHLLQADFESELKVAGFGFRRFEEDDFKVLMRALFSPDFNELSWPVINESHELISEGIPNPSTKIEIEDECIQASIVDLKGEIQKTRLVNCELSDYPVKPFALWQTPDLFANLLDTEQGIQCPFLISFTIRGVNQEKVKAKAKARAKSLSANNNAVQGFINPSIREEAAEWQFVHEHATKGELHLLPTFYNVILYTTKSKEREQVAKAIASFRHLGFTLNISRCKQWLRFLSSLPFMLTEGLFSSISFLGMTKKLTHTNVANLLPVIADFKGARQGLIVPTYRHQLFYLNTFDDRVLPITNFNRLTVASPGAGKSFFEQAQILDGLSRGQQIFVIDLGGSYKHLCEMVGGSYINAATLALNPFTLFDFDGVTEINGEQLNDYIQIRDLLAIMASPSEALGEVQKSWLLDAVTECWKAHGRQAKMDDVLACLQGMLEKPQSQGDQRLKDLTILLGKYGSQGIYGHLFNSDTPLLNGSNLIVLEMGELESNPELLTIVMFVMIVIIQGQFYHSDRKREKRCVIDEAWRFLALGSNPVCASFIEQGFRTARKHMGGFAVITQNLVDTMNTIQGRAIAASSDTKIIMRQGGFKQYVDEHPKHFNPLEVKVIESFGEAKTQGFSNLMIQFGNVTTFHRYFCDPFSRVLFSTSGEEVSLIESLTRQGVSLTDAIQRVANKYYGAE
SIO_010081: DLD14_RS19245
subclass of: SO_0000673
so part of: DLD14_RS19245
location: 10662..13250
location: region:10662-13250:1
so has part: feature:10662-13250:1:exon

WP_019233010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10662-13250:1:exon

DLD14_RS19250
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: trbI
locus tag: DLD14_RS19250
old locus tag: DLD14_19250
so part of: sequence
location: 13247..13585
location: region:13247-13585:1
so has part: feature:13247-13585:1:exon
subclass of: SO_0000010

position:13247:1
position: 13247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13585:1
position: 13585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13247-13585:1:exon

DLD14_RS19250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: trbI
locus tag: DLD14_RS19250
old locus tag: DLD14_19250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019350381.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system protein TrbI
translation: MMRLTPLFLGCALAVFGVVCVLYDASPQKSIVIFDKEVVQGQFIRQLAEIKATESQVEQSTRRFNAVLNKVLVDTAQQKKVIILRASDVLAGGIDITDEVRMKLSKAMRNKS
SIO_010081: DLD14_RS19250
subclass of: SO_0000673
so part of: DLD14_RS19250
location: 13247..13585
location: region:13247-13585:1
so has part: feature:13247-13585:1:exon

WP_223499704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13247-13585:1:exon

DLD14_RS19255
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traW
locus tag: DLD14_RS19255
old locus tag: DLD14_19255
so part of: sequence
location: 13582..14217
location: region:13582-14217:1
so has part: feature:13582-14217:1:exon
subclass of: SO_0000010

position:13582:1
position: 13582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14217:1
position: 14217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13582-14217:1:exon

DLD14_RS19255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traW
locus tag: DLD14_RS19255
old locus tag: DLD14_19255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system protein TraW
translation: MNIFCCLILLMISIDQVHAKSFGVVGEVFPIAEKSFLTLIEERLASLKASGELESLNQRWVQTTAEHANRPTALELPRTNRSARHDYVPEITLSQDIRNEKGRILYSKGTHVNALQQMPSYTPCWLFFNADDEAQLNWAVLQKTQCTNPKLILTGGAINTAEKKLNAVIYFDQAGKITTKLHIAHVPAKVTRYQNHLVIAELAIKENGDVL
SIO_010081: DLD14_RS19255
subclass of: SO_0000673
so part of: DLD14_RS19255
location: 13582..14217
location: region:13582-14217:1
so has part: feature:13582-14217:1:exon

WP_019233008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13582-14217:1:exon

DLD14_RS19260
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traU
locus tag: DLD14_RS19260
old locus tag: DLD14_19260
so part of: sequence
location: 14207..15190
location: region:14207-15190:1
so has part: feature:14207-15190:1:exon
subclass of: SO_0000010

position:14207:1
position: 14207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15190:1
position: 15190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14207-15190:1:exon

DLD14_RS19260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traU
locus tag: DLD14_RS19260
old locus tag: DLD14_19260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212613.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer pilus assembly protein TraU
translation: MCFRILFLTTLFLGSAPLYAKQCTGHFVNPVTDVCWRCLFPLSIGNTKVVNSSLPDTENASSPVGVCPASTGIRIGLNIGFWEPMALTDVTDTPYCLVNLGGTKLNLGLKQGRGGRHVVGNGQQRAFFQVHWYKYPLINWLNLITSVGCLQKGDFDIAYLTELDPTWQDSEMSFVLSPESVLFGNPVAASACAADALSSTFTNKPLDSLFWCAGSQGTHYPMTGHVNASVSPVQTALLLTERMNYKMHREFLVSDSSPKSGAICKEHYYTVPPKSRYRYELVNQVADGKHCYPSGHSTLSWEAGKIKPHTPDQYGFLVWRKRHCTFL
SIO_010081: DLD14_RS19260
subclass of: SO_0000673
so part of: DLD14_RS19260
location: 14207..15190
location: region:14207-15190:1
so has part: feature:14207-15190:1:exon

WP_019233007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14207-15190:1:exon

DLD14_RS19265
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: trbC
locus tag: DLD14_RS19265
old locus tag: DLD14_19265
so part of: sequence
location: 15204..15620
location: region:15204-15620:1
so has part: feature:15204-15620:1:exon
subclass of: SO_0000010

position:15204:1
position: 15204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15620:1
position: 15620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15204-15620:1:exon

DLD14_RS19265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: trbC
locus tag: DLD14_RS19265
old locus tag: DLD14_19265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019350384.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly protein TrbC
translation: MLRKGIFLLIGCVIMTSSFAVQLSVFVSFSMPETLLRETLKESAQRNIPAYLNGLYRDSMSETALKVMALNKRIPNLNMAIDPTLFERFGIQKVPALVVDDGKAFDVIYGHLTIQEGLARMAGRGEVYFTSKEIRRLR
SIO_010081: DLD14_RS19265
subclass of: SO_0000673
so part of: DLD14_RS19265
location: 15204..15620
location: region:15204-15620:1
so has part: feature:15204-15620:1:exon

WP_019233006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15204-15620:1:exon

DLD14_RS19270
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traN
locus tag: DLD14_RS19270
old locus tag: DLD14_19270
so part of: sequence
location: 15617..17323
location: region:15617-17323:1
so has part: feature:15617-17323:1:exon
subclass of: SO_0000010

position:15617:1
position: 15617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17323:1
position: 17323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15617-17323:1:exon

DLD14_RS19270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traN
locus tag: DLD14_RS19270
old locus tag: DLD14_19270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212615.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system mating-pair stabilization protein TraN
translation: MRQFGCILIGFLFTTFVSAQNQNDALHARDEALRALNGFNPATVLKGYTANPGESALQPQEGSNALGAAGLNVLKNNEAAREVYSQAGSRAKVQSNPNSPEMQYAERLLENPDGVLDGACYKQAGVCKNESVIKTCDESVHYTTSSCKDTLNVLVKPITQSFSRVVTPNRFQSTATFDLQACPPRDWRCTTANTALIAPNCEYFAVSVSRYNQAMLVTKQPTCTDPTVTVQFSRRGGYSAPLQVTVTEYVSEDQWKTSECERIITEHAKSFCIMDSSQSCLEPNQAKVIGGISVKRSCWGRGYNYQCAAVFDSACTPLINQGCSQTGSTCVQAKANRCERYSQTFSCIQQFCMPEKTVCPGKVGCSDGQCDTSQNEESDDMAEGLSRFGALAGVAGEVSANQIRSGAAVIFTGKNSTCRKVKGNVRNCCRGSYQMTHCSGDEKLLAYAREEGRAFKVGKFCALKKLGICLEEKQSWCVFPTKLAAIIQIQGRNKQLGINFGWAKDEDNRANCRGITPEELERINFAALDLSPIQQELIARMAVPNNGSINNANQSHIERLKQQGRAHD
SIO_010081: DLD14_RS19270
subclass of: SO_0000673
so part of: DLD14_RS19270
location: 15617..17323
location: region:15617-17323:1
so has part: feature:15617-17323:1:exon

WP_019233005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15617-17323:1:exon

DLD14_RS19275
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traF
locus tag: DLD14_RS19275
old locus tag: DLD14_19275
so part of: sequence
location: 17316..18059
location: region:17316-18059:1
so has part: feature:17316-18059:1:exon
subclass of: SO_0000010

position:17316:1
position: 17316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18059:1
position: 18059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17316-18059:1:exon

DLD14_RS19275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traF
locus tag: DLD14_RS19275
old locus tag: DLD14_19275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly protein TraF
translation: MIKMILISLLLFNGVVFADKPVGFLWYTKEKEQKRVESITPSGIAFKSLSYMERDAVLHFYTMEALHKARYTKKVEDMRVFLSLQDYWLKESSRFKSLFQQTMLAHPEYDYAVTHPTSNLGAKITDEVRESQTVEVINRLSKSHGLLFFYRGKSPYDLKQVPIIVDFCKRFRIQLMPVSVDGATSPELLNSRMDQGQANRLGVRYFPALLLVHPASQRVSPVAYGLTTQDVLMERIKQVANQFKGEE
SIO_010081: DLD14_RS19275
subclass of: SO_0000673
so part of: DLD14_RS19275
location: 17316..18059
location: region:17316-18059:1
so has part: feature:17316-18059:1:exon

WP_019233004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17316-18059:1:exon

DLD14_RS19280
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: trbB
locus tag: DLD14_RS19280
old locus tag: DLD14_19280
so part of: sequence
location: 18056..18568
location: region:18056-18568:1
so has part: feature:18056-18568:1:exon
subclass of: SO_0000010

position:18056:1
position: 18056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18568:1
position: 18568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18056-18568:1:exon

DLD14_RS19280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: trbB
locus tag: DLD14_RS19280
old locus tag: DLD14_19280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB
translation: MMIARVFLSVMLAFIGLGARAEGSQWLTNMIAEQEGVVTHQSEAPLNTKGKGFFSTHGLILFYGSQCPHCKQFAPILKQWVTRTNAELLPLSLDNQPLPEFPKFLPATTEWINAAFGGNAINYPALFVVNPKTKALYPVGFGSMTEAELNDRMNALIPKINAYELKGKLS
SIO_010081: DLD14_RS19280
subclass of: SO_0000673
so part of: DLD14_RS19280
location: 18056..18568
location: region:18056-18568:1
so has part: feature:18056-18568:1:exon

WP_223499702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18056-18568:1:exon

DLD14_RS19285
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19285
old locus tag: DLD14_19285
so part of: sequence
location: 18565..19929
location: region:18565-19929:1
so has part: feature:18565-19929:1:exon
subclass of: SO_0000010

position:18565:1
position: 18565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19929:1
position: 19929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18565-19929:1:exon

DLD14_RS19285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19285
old locus tag: DLD14_19285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019233002.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraH
translation: MKKNALTLCLLGFLSTAHANVSQDLDSFFNGMGYASNVTSPAAFESQAAGFFGGGSLYARNQVRQYQLVQLDLPSYRAGCGGIDLFTGSMSFLSEQKLVDLGKSVMTNAGAYAVDVMLASTVPELKQVRDYLQQLEQMANQASINSCQLSQNMVGGIWPKTAESQQKICKDQAAMGKEGLFSDYVKARMACSGSGFDNVMNKASQDPERKKQVVLNKNLVWSLLQAKSFLNSDRELAEMVMSLTGTLIVDKEGKVTNVPSLAGNADLVNALIGTGVGAKTAKIWRCKDAGANSQCMQVSLQDITIPEASTLTYKVREIIRTINTKLINDEKPGNRELNFLSMTSLPVMKFLSVLNSMHYGSSAVDIEEYSMLIAQDLLTNYLTELLGEVSVATVGSELNTDLVKEIQKRINEATTRVASIDPKVGRKLQEKLTLIERMAQIEKQVASQMNSTAG
SIO_010081: DLD14_RS19285
subclass of: SO_0000673
so part of: DLD14_RS19285
location: 18565..19929
location: region:18565-19929:1
so has part: feature:18565-19929:1:exon

WP_019233002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18565-19929:1:exon

DLD14_RS19290
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traG
locus tag: DLD14_RS19290
old locus tag: DLD14_19290
so part of: sequence
location: 19941..22772
location: region:19941-22772:1
so has part: feature:19941-22772:1:exon
subclass of: SO_0000010

position:19941:1
position: 19941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22772:1
position: 22772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19941-22772:1:exon

DLD14_RS19290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traG
locus tag: DLD14_RS19290
old locus tag: DLD14_19290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019350389.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer mating-pair stabilization protein TraG
translation: MITIHVLAGGELFQHVLNAISAFMKQDSFLGLLRITALIGVVMATIGFIKTRDPMAFARWFIGYVLFVNLVLLPKTSVLIDDISSQTPKIVDNVPVVFALSASLVTAIGYGLAQSYDALLTMPDDLQYTKTGALFGSRLVSASTSFRIKDPVLKEEMNEYFRVCVVGDIRLNRKYSVGDLAHSTDIWNLITARASPLRMISVSGKLVTCQEASKPDGQYSLRKKLDVEIKKAYTFFGVNLFGKPKNTTYEALFSTHLKSAFDYYQGLTDSSSNIFLQSMMINAMGDGVAHYQAFTDATAGIVNQQFTKSQVQHRWSWEVLGQKALWILPITHTCLTLLLFGVFPLIIALTTLPGGVKILYGYMQFFMSLQFWPVLFAILNAGMTIYGASSSAEYGQFTMVNLDKIDELHADISGACGYLMMLIPFLSHGLVSNLGGAFSNLATSMMSHMQGSSMSVAGEAASGSFGLGQTSFYNTTANNFSANKHDSNWTHMHGMHTEQLGSGVLKTLTGSGDAVFDVSPGMTKSHIHIADSKALTGSLNKAYEQSTQAAVNESKAYQSALSNFAHRALALSQLAGHDMRLGDGISSSDSAQYSSALSQMSRISEDVAHRNGISKEDAFAAMTSGGHGVSGGVDLQKSVAGKIFGIKGGWDAHLNYERSSTNAYRSQEGYDKVVSAQEAQDFNKASQYVSQFAKNHHFDDSHSEAASLSNQMGVDIREAENASHNYDVSNTRAMRIAEAKQYVESKSEQITADLNQAFPSFVASKVGSSHRDALFSRPGDMNSIHELEGLASTFVNAKREQLIAEYSTRGSSSSIDAFYQNESQILEQMSNNIGTHYQQNNDALTASAKTLGVGLTSDKKNNLVNQVHAKVNETQRAHQNNVKLSSPDHILQTKEAQMSEYNKIEPNWKYDATTGVIPGHVVDKAAHKLGVDNLSERYFNGEK
SIO_010081: DLD14_RS19290
subclass of: SO_0000673
so part of: DLD14_RS19290
location: 19941..22772
location: region:19941-22772:1
so has part: feature:19941-22772:1:exon

WP_019233001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19941-22772:1:exon

DLD14_RS19295
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19295
old locus tag: DLD14_19295
so part of: sequence
location: 22772..23527
location: region:22772-23527:1
so has part: feature:22772-23527:1:exon
subclass of: SO_0000010

position:23527:1
position: 23527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22772-23527:1:exon

DLD14_RS19295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19295
old locus tag: DLD14_19295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019350390.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDLKKAMAMDLEKIKHLDLGIIPAGTYYKNLFLGWLLLFFLIFLIQAAACFFAISIKSWDYAPNIYQYNSIKSMDEFHYSQERKTRDMIKESFPNASEEKLKQLFNEEETRWKEGELTQRKELLRDHKNQVIYMWLSIFFTSLCISLYGVRLIKNYIIFKYQISPKLETGHYLIKKIHLGAKLCFGVFSALAFVIFPILPQEATFFSIIPCFFGTIIVTSIAINMEASRIGMSVLSKALSNFFHKEKEGV
SIO_010081: DLD14_RS19295
subclass of: SO_0000673
so part of: DLD14_RS19295
location: 22772..23527
location: region:22772-23527:1
so has part: feature:22772-23527:1:exon

WP_019233000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22772-23527:1:exon

DLD14_RS19300
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traD
locus tag: DLD14_RS19300
old locus tag: DLD14_19300
so part of: sequence
location: 23527..25392
location: region:23527-25392:1
so has part: feature:23527-25392:1:exon
subclass of: SO_0000010

position:25392:1
position: 25392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23527-25392:1:exon

DLD14_RS19300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traD
locus tag: DLD14_RS19300
old locus tag: DLD14_19300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019350438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system coupling protein TraD
translation: MSKDPNFKHYTRGGQISFHNLRMWDQITKTLSMICLFLWVVFTVVFAWIFIPLEKITHAVAFYYAQFLSVIGQKHHFELSFHGKTYKQSVDTILHYAYYQDNANHVINSLGKSAFWAFCLAFILGLGLAYYFIKRGKEQSDSQYVRGSQLKNSNEVKKKILRDKAHSDIRIDQFPLIRDSEVQHLLVHGTVGTGKSQLIMKIMDCLRKRGDRVIIYDKGCSFIPHYYQDESDVILNPFDKRCANWDMWLEAPRDSDFENMAESSIPMHGESDPFWVNASRTVFSCLGSVMRHHSDRSLDKFLKLILTDEFSALEEYLQGTPAATLVSGKIEKTAISIRATLTTYLKSFSALAELNQEGKQPFSIRDYILDEQQKGWLFISSNGETHKSLKPLISMWLAQASLALLSLTPDRSRRIWFICDELPSLHKLPLLGETIAEVRKFGGCFLLGMQSFSQLTKVYGQAGAKEIFDLLNTRFFFRSPSSDMARLVAAELGEEEIEESRENYSYGANSIRDGISLGAQRVTRPIVSYPQIMELKDLNCFVRLPGHYPITQLTLDLGFRTTKTNGFIERSMPTTFNFSQLTSFDDHLESGTNGHMGSEPLTKNKINATLQCIEELNLEPL
SIO_010081: DLD14_RS19300
subclass of: SO_0000673
so part of: DLD14_RS19300
location: 23527..25392
location: region:23527-25392:1
so has part: feature:23527-25392:1:exon

WP_019232999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23527-25392:1:exon

DLD14_RS19305
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19305
old locus tag: DLD14_19305
so part of: sequence
location: complement(25429..25860)
location: region:25429-25860:-1
so has part: feature:25429-25860:-1:exon
subclass of: SO_0000010

position:25429:-1
position: 25429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25860:-1
position: 25860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25429-25860:-1:exon

DLD14_RS19305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19305
old locus tag: DLD14_19305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MISEQVILNKFIDFTKVAAPVLSLKDEQAYEDALTMMEHLMESVGEQRNKPENILIGLLAHAIEEYESKDEEISDFVSQSMSDRGDVALLRMIIDQHQLTLSDLPEVGHKSLISKILSGERNLTRSHIEKLSKRFHIDPGLFF
SIO_010081: DLD14_RS19305
subclass of: SO_0000673
so part of: DLD14_RS19305
location: complement(25429..25860)
location: region:25429-25860:-1
so has part: feature:25429-25860:-1:exon

WP_019232998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25429-25860:-1:exon

DLD14_RS19310
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19310
old locus tag: DLD14_19310
so part of: sequence
location: complement(25857..26168)
location: region:25857-26168:-1
so has part: feature:25857-26168:-1:exon
subclass of: SO_0000010

position:25857:-1
position: 25857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26168:-1
position: 26168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25857-26168:-1:exon

DLD14_RS19310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19310
old locus tag: DLD14_19310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004948411.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HigB family toxin
translation: MHVISKKPFVEAAKKYPNQRQAILDLYRVLDKITVNTPLEMKAIFPSLDNFKYKDKWWIIDIGGNHLRLMAFIQFSQNRIYVKHIVTHAEYDRLCEQYRRNKQ
SIO_010081: DLD14_RS19310
subclass of: SO_0000673
so part of: DLD14_RS19310
location: complement(25857..26168)
location: region:25857-26168:-1
so has part: feature:25857-26168:-1:exon

WP_019232997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25857-26168:-1:exon

DLD14_RS19315
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19315
old locus tag: DLD14_19315
so part of: sequence
location: complement(26257..26868)
location: region:26257-26868:-1
so has part: feature:26257-26868:-1:exon
subclass of: SO_0000010

position:26257:-1
position: 26257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26868:-1
position: 26868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26257-26868:-1:exon

DLD14_RS19315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19315
old locus tag: DLD14_19315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019350392.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDRDEDEVVDASMVPMSHAKAMDSDIFETVQSLKSVVLLLKGLYGQMNEEREVITLASGQMAHSVKQFEQYLKQFASFEQSCKQAIIERVKTELKQSIQESAKVIAQEVTDIAYEPINRGINSLCQLSSDMAESRKHHERSRLLRVGLFLSAALLGGIVSGFTQHHLTAPSKEIKVKLAAGEMLMRSWSKLSQTEKDKITKS
SIO_010081: DLD14_RS19315
subclass of: SO_0000673
so part of: DLD14_RS19315
location: complement(26257..26868)
location: region:26257-26868:-1
so has part: feature:26257-26868:-1:exon

WP_019232996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26257-26868:-1:exon

DLD14_RS19320
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: traA
locus tag: DLD14_RS19320
old locus tag: DLD14_19320
so part of: sequence
location: complement(26879..29548)
location: region:26879-29548:-1
so has part: feature:26879-29548:-1:exon
subclass of: SO_0000010

position:26879:-1
position: 26879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29548:-1
position: 29548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26879-29548:-1:exon

DLD14_RS19320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: traA
locus tag: DLD14_RS19320
old locus tag: DLD14_19320
inference: COORDINATES: protein motif:HMM:TIGR02768.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIYRFSAQPISRSQGRCVVASSAYRSGEKITDERTGTIYDYTGKNDVVHKEIFLPENAPRWMSERSQLWNAVELGEHRKDAQLAREVQLALPRELTIEQNTELVREFVQSEFVARGMVADFCFHNPKGDDGLTQPHAHILLTLREVNEEGFGLKERAWNDKALLEHWREEWANCQNRHLALHGIDQRVDHRSYKEQGIPLEPQYKIGAKCAQQHMARLEDHQRIAKENGQLIFERPEIALDALTRNQSTFTHQDLARFINRHTEDAEQFKLVFERVKSCDELVLLGVDSEGRQRFSTRDMLSIESSMMKQADKLHHQKGHEVDEHALLHAKSNRTLSQEQEVALDYVTSSGDMKSLLGYAGTGKSYLLGAAREAWEQSGYRVQGAALSGIAALNLSDSSGIESRTIASLFYRLDKGMLTLNSRDILVVDEAGMLGSRTMERLTREVEKASAKLVLVGDWQQLQAIEAGASFRSIAENYQYAELNQIRRQTTPWQVEASFNLAKGDVAHALHAYDIHDHIHRFRTTSEAKHSLIEQWNDVRIAQRCESQIILAYTRKDVKELNDMARLIKRRDGELGEDVVFGMERGERAFAVNDRVYFLKREDSLSVINGTLGTIHGIDAKSGVITVALDRDDLNKKPQLIQVNTHYYKHMEHGYAATVYKAQGVTVDRTYVLPTKHYDAHSTYVAMTRHRKSCDVFVSREVFAHDKALVHALNRNRAKDVTLDYTQMASEFARQRGLVSENMPLRSLLKDEHSRKSEPSLSSLMNQVMGRDVQLEQQKLDAFERQFTKENPSEALHIANSLLSTAAYQAKSLAGLFAPYSKAIARNQLTSVQNEELIRLIGTLPLDSQVMNAFKKDYPELSTQAELFIKRNEQQLMRIKTIDKELDL
SIO_010081: DLD14_RS19320
subclass of: SO_0000673
so part of: DLD14_RS19320
location: complement(26879..29548)
location: region:26879-29548:-1
so has part: feature:26879-29548:-1:exon

WP_019232995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26879-29548:-1:exon

DLD14_RS19325
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19325
old locus tag: DLD14_19325
so part of: sequence
location: 29774..30070
location: region:29774-30070:1
so has part: feature:29774-30070:1:exon
subclass of: SO_0000010

position:29774:1
position: 29774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30070:1
position: 30070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29774-30070:1:exon

DLD14_RS19325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19325
old locus tag: DLD14_19325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEKQSRLDALKKKQEQLRAQIQKLESIEKSRERKRDTRRKILVGSYFIDKANQEGTLFDLYQQIDKYIKRNADRELFHLEPLTEEQSNSKLEELESQ
SIO_010081: DLD14_RS19325
subclass of: SO_0000673
so part of: DLD14_RS19325
location: 29774..30070
location: region:29774-30070:1
so has part: feature:29774-30070:1:exon

WP_019232994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29774-30070:1:exon

DLD14_RS19590
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19590
so part of: sequence
location: 30086..30343
location: region:30086-30343:1
so has part: feature:30086-30343:1:exon
subclass of: SO_0000010

position:30086:1
position: 30086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30343:1
position: 30343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30086-30343:1:exon

DLD14_RS19590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKWIKMMFKPFIWIYNNIDPIDDESSCFNSSKKNDTRINPATGLPMRGAFDTYGNTLGTSSSSWNNDYSRSYSSFSNFNSFNNRF
SIO_010081: DLD14_RS19590
subclass of: SO_0000673
so part of: DLD14_RS19590
location: 30086..30343
location: region:30086-30343:1
so has part: feature:30086-30343:1:exon

WP_127908205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30086-30343:1:exon

DLD14_RS19330
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19330
old locus tag: DLD14_19330
so part of: sequence
location: 30355..30591
location: region:30355-30591:1
so has part: feature:30355-30591:1:exon
subclass of: SO_0000010

position:30355:1
position: 30355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30591:1
position: 30591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30355-30591:1:exon

DLD14_RS19330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19330
old locus tag: DLD14_19330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010655087.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLTLSDQDKEIIRLVEAQVKLLIERTVPDHVIVSTLIDFIPDVRCMVTATCEKQLDLYCKEYQHFNYFLQLINQSSL
SIO_010081: DLD14_RS19330
subclass of: SO_0000673
so part of: DLD14_RS19330
location: 30355..30591
location: region:30355-30591:1
so has part: feature:30355-30591:1:exon

WP_080480132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30355-30591:1:exon

DLD14_RS19335
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19335
old locus tag: DLD14_19335
so part of: sequence
location: complement(30904..31209)
location: region:30904-31209:-1
so has part: feature:30904-31209:-1:exon
subclass of: SO_0000010

position:30904:-1
position: 30904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31209:-1
position: 31209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30904-31209:-1:exon

DLD14_RS19335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19335
old locus tag: DLD14_19335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006869499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTNRNIGNEIIQGMEEAIEYIRGNKGSAKVHKVEIPNEIDVREIRENLNLSRKEFADSFGFSPRTLQHWEQGDRAPHGAAKVLLLLLQREPATIAKILRQN
SIO_010081: DLD14_RS19335
subclass of: SO_0000673
so part of: DLD14_RS19335
location: complement(30904..31209)
location: region:30904-31209:-1
so has part: feature:30904-31209:-1:exon

WP_019232993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30904-31209:-1:exon

DLD14_RS19340
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19340
old locus tag: DLD14_19340
so part of: sequence
location: complement(31202..31564)
location: region:31202-31564:-1
so has part: feature:31202-31564:-1:exon
subclass of: SO_0000010

position:31202:-1
position: 31202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31564:-1
position: 31564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31202-31564:-1:exon

DLD14_RS19340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19340
old locus tag: DLD14_19340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006869498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MKRMITIIEFPGFLSQVGNSISAAERDEFINFIARNPEVGDLIPGTGGVRKVRWGSKNKGKSGGVRVIYYFYDELAPVFLLTAYGKGEKENLTAEQKKQISALAQVLKSECKNRRSQEHD
SIO_010081: DLD14_RS19340
subclass of: SO_0000673
so part of: DLD14_RS19340
location: complement(31202..31564)
location: region:31202-31564:-1
so has part: feature:31202-31564:-1:exon

WP_019232992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31202-31564:-1:exon

DLD14_RS19345
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19345
old locus tag: DLD14_19345
so part of: sequence
location: 31728..33050
location: region:31728-33050:1
so has part: feature:31728-33050:1:exon
subclass of: SO_0000010

position:31728:1
position: 31728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33050:1
position: 33050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31728-33050:1:exon

DLD14_RS19345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19345
old locus tag: DLD14_19345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006870345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1186 domain-containing protein
translation: MTIEQFIESISTIPYRSLEKEFDFARKNQALVTPHLLSILEKTLKSLDKEPAKHRSAHVIAIFLLALFREKAAYPLIIELLNKMPNSFEHRIFNDELEDMPNILASTFNGNIEPIYKLIENTNAYEFARIAAIDSLVALWHTKQISRESVLAYFDNLLTNNFNENANTGLQPWIIHSALRLYPEEVMNSIRLAFYFLGEDLYWSNDPLILPMEFETAMKKGKEYVFKNYLDKDNFHIITCLAEEFKDWYWFAPEPQYQIRAEQMLEPIEVIEEKIISEEEEIKEEDIMFVGDDKHMAYCHKLYGDFNEKGLQCLQDKYDTVHIKHAGELASELQYHASELQESIELMEQASRELIYGESPFSNNYKIDEQGDIGDFASELYQMASSIEDIIAQISKKLAPLGRLLPIGPDDDDDVIFHKEIEDWLDDPKGYQHGIHSYFD
SIO_010081: DLD14_RS19345
subclass of: SO_0000673
so part of: DLD14_RS19345
location: 31728..33050
location: region:31728-33050:1
so has part: feature:31728-33050:1:exon

WP_019232991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31728-33050:1:exon

DLD14_RS19350
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19350
old locus tag: DLD14_19350
so part of: sequence
location: complement(33065..33469)
location: region:33065-33469:-1
so has part: feature:33065-33469:-1:exon
subclass of: SO_0000010

position:33065:-1
position: 33065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33469:-1
position: 33469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33065-33469:-1:exon

DLD14_RS19350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19350
old locus tag: DLD14_19350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212624.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MRYPVVIHKDEQSDFGVSIPDIPGCYSAGSTYDEALTNAIEAIECHLEGLLMDNESLPVGTTIDRWINDEEFQGGVWAFIDIDLSQISGKAKRINITMPERVLSLIDLYAKNHSIKNRSSFLADAALSYMESHK
SIO_010081: DLD14_RS19350
subclass of: SO_0000673
so part of: DLD14_RS19350
location: complement(33065..33469)
location: region:33065-33469:-1
so has part: feature:33065-33469:-1:exon

WP_019232990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33065-33469:-1:exon

DLD14_RS19355
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19355
old locus tag: DLD14_19355
so part of: sequence
location: complement(33466..33663)
location: region:33466-33663:-1
so has part: feature:33466-33663:-1:exon
subclass of: SO_0000010

position:33466:-1
position: 33466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33663:-1
position: 33663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33466-33663:-1:exon

DLD14_RS19355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19355
old locus tag: DLD14_19355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019232989.1
GO function: GO:0003729 - mRNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MKSAEIIKIIERDGWVQCHQKGSHCQFKHPAKKGRVTVPHPKKDLPIKTVVSIFKQAGINKEDIK
SIO_010081: DLD14_RS19355
subclass of: SO_0000673
so part of: DLD14_RS19355
location: complement(33466..33663)
location: region:33466-33663:-1
so has part: feature:33466-33663:-1:exon

WP_019232989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33466-33663:-1:exon

DLD14_RS19360
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19360
old locus tag: DLD14_19360
so part of: sequence
location: complement(33833..34159)
location: region:33833-34159:-1
so has part: feature:33833-34159:-1:exon
subclass of: SO_0000010

position:33833:-1
position: 33833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34159:-1
position: 34159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33833-34159:-1:exon

DLD14_RS19360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19360
old locus tag: DLD14_19360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKTWMTHLPHFLDEHGGLPLEFHASARRMLKALCKFVAYATNFDGEGDELPQCFMVSKRKRCRGKVTPLISMEDDAIIWHCFKCGSGGCISGWQGTLWDLSEHFESH
SIO_010081: DLD14_RS19360
subclass of: SO_0000673
so part of: DLD14_RS19360
location: complement(33833..34159)
location: region:33833-34159:-1
so has part: feature:33833-34159:-1:exon

WP_019232988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33833-34159:-1:exon

DLD14_RS19365
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19365
old locus tag: DLD14_19365
so part of: sequence
location: complement(34183..35202)
location: region:34183-35202:-1
so has part: feature:34183-35202:-1:exon
subclass of: SO_0000010

position:34183:-1
position: 34183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35202:-1
position: 35202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34183-35202:-1:exon

DLD14_RS19365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19365
old locus tag: DLD14_19365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006871708.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNSLDRQNTKNQKFVIDKIFHPLDVHFDTNSLSAWLSYYYSVHVKGAPEKTEQAKMKDLSKFINFFQNEVGHDLVDSWTPAVSKQFQKNLSKTISDKTGKPYKATSINRTMATIRHVGRWLHQQRPLLAGDPLAQVKDLQTDAPDWNGLTSRQLMRLKSACEQRIKSCTRKNQNPLMETALFYLLLGTGLRESEVVSLNVGQYQQKGLCEVLRHKSKRISQKIPLPQESREYLDRYLEKRDTQENGPLFITRYGTRLQTLDVYRICQRVLKQALAFLPEHEKFEFTPHKLRHTFLKKVTDKHGVHFAQELSGNVSIKEIFRYAKPSQEEMQLTIESLFE
SIO_010081: DLD14_RS19365
subclass of: SO_0000673
so part of: DLD14_RS19365
location: complement(34183..35202)
location: region:34183-35202:-1
so has part: feature:34183-35202:-1:exon

WP_019232987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34183-35202:-1:exon

DLD14_RS19375
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19375
old locus tag: DLD14_19375
so part of: sequence
location: complement(35293..35520)
location: region:35293-35520:-1
so has part: feature:35293-35520:-1:exon
subclass of: SO_0000010

position:35293:-1
position: 35293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35520:-1
position: 35520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35293-35520:-1:exon

DLD14_RS19375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19375
old locus tag: DLD14_19375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003635393.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ChaB family protein
translation: MPYKKINELPDSVKDNLPNHAQEIYKEAYNNAWDQYDEPDKRQGDRDREETAHAVAWSAVKKEYEKNSEGKWVKK
SIO_010081: DLD14_RS19375
subclass of: SO_0000673
so part of: DLD14_RS19375
location: complement(35293..35520)
location: region:35293-35520:-1
so has part: feature:35293-35520:-1:exon

WP_019232986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35293-35520:-1:exon

DLD14_RS19380
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19380
old locus tag: DLD14_19380
so part of: sequence
location: complement(35835..36584)
location: region:35835-36584:-1
so has part: feature:35835-36584:-1:exon
subclass of: SO_0000010

position:35835:-1
position: 35835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36584:-1
position: 36584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35835-36584:-1:exon

DLD14_RS19380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19380
old locus tag: DLD14_19380
inference: COORDINATES: protein motif:HMM:NF013117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel family protein
translation: MQTLAKIGWIHFSYALVLALIGFIIAGYVRRITNHAVKKRYSEHEALICGRLVFFGILLIFLITAMQQIGIQMTAILGAAGVVTVALSFAAKTAASNFVSGIFLIFERPFKIGDIIQIKNIQGTVDAIDLLSTKLKTSENTLIRIPNEMINKSEITNLSHFKTRAVSIKIPVSYTVDVNPIKNILLDLANKDKEIMEKPSPEVTLGDFTDSTIDINLKFWAHNRDTNAVKNRLQEAIKQEFEKKKIEIS
SIO_010081: DLD14_RS19380
subclass of: SO_0000673
so part of: DLD14_RS19380
location: complement(35835..36584)
location: region:35835-36584:-1
so has part: feature:35835-36584:-1:exon

WP_019232985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35835-36584:-1:exon

DLD14_RS19385
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19385
old locus tag: DLD14_19385
so part of: sequence
location: 37041..38264
location: region:37041-38264:1
so has part: feature:37041-38264:1:exon
subclass of: SO_0000010

position:37041:1
position: 37041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38264:1
position: 38264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37041-38264:1:exon

DLD14_RS19385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19385
old locus tag: DLD14_19385
inference: COORDINATES: protein motif:HMM:NF020037.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain S-box protein
translation: MDTSQNFKEDAKVILESAPDLYLILCPKLHIVGASDAYLKATMVKREEILGRYLFDVFPDNPDDTLATGVNNLHYSLNRVLKDKTSDSMAIQKYDIKRPASSGGDFEVRYWSPLNCPVLDKKNQVQYIIHRVEDVTEFIRLQQSHDSQLKVIEALQSHEGKINAEILQRAHDIQELNKQLEERERYNLSFLSAIPDAMILTNQEGKIEFINNQVEVMFDCTKEELLGKTVEYLMPDNAAKIHPNHRGNYFKSPRVRPMGQGMELQGKRKNGEIFPVEISLSPLQTTSGLSAIAIIRDVTLRVEQNKLLQQKEASLRKLYDVNEKEKLQLESINQKMFLITQLSETLLACKNIDEILESSSSFANKILDFSDGVLYLMHNSRNYLEKKLPGEIQIIMQKLFPQMNAGL
SIO_010081: DLD14_RS19385
subclass of: SO_0000673
so part of: DLD14_RS19385
location: 37041..38264
location: region:37041-38264:1
so has part: feature:37041-38264:1:exon

WP_019232984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37041-38264:1:exon

DLD14_RS19390
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19390
old locus tag: DLD14_19390
so part of: sequence
location: 38330..39034
location: region:38330-39034:1
so has part: feature:38330-39034:1:exon
subclass of: SO_0000010

position:38330:1
position: 38330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39034:1
position: 39034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38330-39034:1:exon

DLD14_RS19390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19390
old locus tag: DLD14_19390
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor domain-containing diguanylate cyclase
translation: MNQKQHSSLCIPLMAQNEIFGLLFIYRGTDVLPSEKLNTLISVVAETISLAIANIRLKELLHSQSIRDPLTGLLNRRFLDEYLIKQIGQAKRTQTSIAFIMLDVDNFKKVNDTFGHETGDYVLSLLGNLLGASGREGDVTCRYGGEEFLFVLPNCDLEHAKECAETIRNEVHNMPIRIKENVCSITISLGISIFPNSGSTSKELIDTADKALYEAKKRGKNRTFIFSDIDKQEK
SIO_010081: DLD14_RS19390
subclass of: SO_0000673
so part of: DLD14_RS19390
location: 38330..39034
location: region:38330-39034:1
so has part: feature:38330-39034:1:exon

WP_019232983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38330-39034:1:exon

DLD14_RS19975
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19975
old locus tag: DLD14_19395
pseudo: true
so part of: sequence
location: complement(<40016..>40156)
location: region:40016-40156:-1
so has part: feature:40016-40156:-1:exon
subclass of: SO_0000010

position:40016:-1
position: 40016
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:40156:-1
position: 40156
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40016-40156:-1:exon

DLD14_RS19975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19975
old locus tag: DLD14_19395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010654262.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: anion transporter
SIO_010081: DLD14_RS19975
subclass of: SO_0000673
so part of: DLD14_RS19975
location: complement(<40016..>40156)
location: region:40016-40156:-1
so has part: feature:40016-40156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40016-40156:-1:exon

DLD14_RS19400
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19400
old locus tag: DLD14_19400
so part of: sequence
location: 40698..40892
location: region:40698-40892:1
so has part: feature:40698-40892:1:exon
subclass of: SO_0000010

position:40698:1
position: 40698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40892:1
position: 40892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40698-40892:1:exon

DLD14_RS19400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19400
old locus tag: DLD14_19400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014845111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHQYAAKIYVDDTIIANSSGDNVEQLYVWMLAKVNGSRGNIRGEIIENATQKIVRHFKKAAIE
SIO_010081: DLD14_RS19400
subclass of: SO_0000673
so part of: DLD14_RS19400
location: 40698..40892
location: region:40698-40892:1
so has part: feature:40698-40892:1:exon

WP_019232982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40698-40892:1:exon

DLD14_RS19405
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19405
old locus tag: DLD14_19405
so part of: sequence
location: 41167..41559
location: region:41167-41559:1
so has part: feature:41167-41559:1:exon
subclass of: SO_0000010

position:41167:1
position: 41167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41559:1
position: 41559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41167-41559:1:exon

DLD14_RS19405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19405
old locus tag: DLD14_19405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010653248.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLNNSWYGLNLLPIYVDIIDERLESVCLQLKNLENVRTNPQQLNSETLTRIMKYCYAQKENNQAYFEQCSQWRNSTPNEEQLQLIARIEKSAAKLEFINQEILKLVESYQKKDQQWWKKTLKLTFDVFH
SIO_010081: DLD14_RS19405
subclass of: SO_0000673
so part of: DLD14_RS19405
location: 41167..41559
location: region:41167-41559:1
so has part: feature:41167-41559:1:exon

WP_019232981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41167-41559:1:exon

DLD14_RS19410
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19410
old locus tag: DLD14_19410
so part of: sequence
location: 41683..42840
location: region:41683-42840:1
so has part: feature:41683-42840:1:exon
subclass of: SO_0000010

position:41683:1
position: 41683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42840:1
position: 42840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41683-42840:1:exon

DLD14_RS19410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19410
old locus tag: DLD14_19410
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MEQRTADSLRIERFLYLLKGTLRSIPFNSVGAGFLSLAFLYNQGLSLRVLFWFFLISLLSLGRWLYNRIVIAKKSYQSHFELTRSLFLVFIFLTGLAWGSAFFIFPPGINVTEQAIIALVLGGMAAGAIAALSGYLPSFYAYVVPMFLPIILYDFYSLTPNKVIIGVLYCMFLALVFLTAQTNAQLLTNSFKYGHEKDILINELTLMNLRLEKSIEEIKTLSITDSLTGLYNRRHFDALLYNELKTAQHHHYPIHLVLIDIDNFKFINDTYGHPSGDDFLIYVANTLKNATKCASDMIFRLGGDEFALIVSHSVPHDVLYFCNALQDRFSQSNRHKQVTLSIGIISVVSFKSLDKEAVIHAADRTLYQAKKDGKNKIIAEVISEV
SIO_010081: DLD14_RS19410
subclass of: SO_0000673
so part of: DLD14_RS19410
location: 41683..42840
location: region:41683-42840:1
so has part: feature:41683-42840:1:exon

WP_019232980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41683-42840:1:exon

DLD14_RS19415
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19415
old locus tag: DLD14_19415
pseudo: true
so part of: sequence
location: complement(42883..43508)
location: region:42883-43508:-1
so has part: feature:42883-43508:-1:exon
subclass of: SO_0000010

position:42883:-1
position: 42883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43508:-1
position: 43508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42883-43508:-1:exon

DLD14_RS19415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19415
old locus tag: DLD14_19415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019233278.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: response regulator
SIO_010081: DLD14_RS19415
subclass of: SO_0000673
so part of: DLD14_RS19415
location: complement(42883..43508)
location: region:42883-43508:-1
so has part: feature:42883-43508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42883-43508:-1:exon

DLD14_RS19420
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19420
old locus tag: DLD14_19420
so part of: sequence
location: complement(43986..44477)
location: region:43986-44477:-1
so has part: feature:43986-44477:-1:exon
subclass of: SO_0000010

position:43986:-1
position: 43986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44477:-1
position: 44477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43986-44477:-1:exon

DLD14_RS19420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19420
old locus tag: DLD14_19420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014845113.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20/alpha crystallin family protein
translation: MSKLATWKKETPIAVEHSHNPFLRLQNEVDRVFSEFNDFFSPSRFNLGFDNLNLAPSMDVVEDKDHYSIQLEMPGMDEKDIKVSLADNVLTITGEKSTSKKNEDKKFLSREISYGKYERSISLPATVDVDKAKATFKKGMLWVELPKKEEAKRSARDIKIEKA
SIO_010081: DLD14_RS19420
subclass of: SO_0000673
so part of: DLD14_RS19420
location: complement(43986..44477)
location: region:43986-44477:-1
so has part: feature:43986-44477:-1:exon

WP_019232977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43986-44477:-1:exon

DLD14_RS19425
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
gene: phbB
locus tag: DLD14_RS19425
old locus tag: DLD14_19425
so part of: sequence
location: 44680..45420
location: region:44680-45420:1
so has part: feature:44680-45420:1:exon
subclass of: SO_0000010

position:44680:1
position: 44680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45420:1
position: 45420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44680-45420:1:exon

DLD14_RS19425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
gene: phbB
locus tag: DLD14_RS19425
old locus tag: DLD14_19425
EC number: 1.1.1.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010655385.1
GO function: GO:0018454 - acetoacetyl-CoA reductase activity [Evidence IEA]
GO process: GO:0042619 - poly-hydroxybutyrate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetoacetyl-CoA reductase
translation: MDKKIAVVTGGTGGIGSAICKHLASNYQVIACYFKNGNHDEAKRWQEEQRKTGFDMDILYADISKFADCEEMAHLILEKYGQVDVLVNNAGITADTSLKKMSPEQWQQVIDANLTSVFNVTRTILPSMLDKGYGRIISISSINGRKGQFGQCNYAATKAALFGFTKSLALEVASKGITVNTISPGYIETPMLAAMKEEVLNAIISNIPIGRLGKPEEIANVVAFLANPASGFITGANFDINGGQYM
SIO_010081: DLD14_RS19425
subclass of: SO_0000673
so part of: DLD14_RS19425
location: 44680..45420
location: region:44680-45420:1
so has part: feature:44680-45420:1:exon

WP_019232976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44680-45420:1:exon

DLD14_RS19430
type: Gene
subclass of: SO_0000704
RO_0002162: 28082
locus tag: DLD14_RS19430
old locus tag: DLD14_19430
so part of: sequence
location: complement(46240..47316)
location: region:46240-47316:-1
so has part: feature:46240-47316:-1:exon
subclass of: SO_0000010

position:46240:-1
position: 46240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47316:-1
position: 47316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46240-47316:-1:exon

DLD14_RS19430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28082
locus tag: DLD14_RS19430
old locus tag: DLD14_19430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003637171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPYTQIVEDTGIPKSTLERYIKELHEAGFIERRQALYSRTKEQGGFEVKKGTYIHITEKLLNLIKHSAPVSEPPKADTTHIHKDKHDSYQKCNEDQNALKSECNKFDINEGIDPLKMRGLYISDNYTSFFINNIILKKLTCSVDKPTLQRLSQQFETIQNLLSSEIKEEIPDEVKKLVLGTFFNLTFEHKKQFSSPKQLAAEYLFALLNIDFYLPDVACFKHRNNILSKMIRQNLWRTPKGFYKHFYLGQNFKDKHELREQQWQRKKDKEMSQDYNSNSDRKDERLIQLEAQMIAKSTLIDELTQSIYQQSSEEVILKIRENIQSLRNELETLWNQQIFIEQEIEKQQLLHSTRLCA
SIO_010081: DLD14_RS19430
subclass of: SO_0000673
so part of: DLD14_RS19430
location: complement(46240..47316)
location: region:46240-47316:-1
so has part: feature:46240-47316:-1:exon

WP_223499699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46240-47316:-1:exon