Neotabrizicola shimadae strain N10 plasmid unnamed3, complete sequence.
type: Entry
definition: Neotabrizicola shimadae strain N10 plasmid unnamed3, complete sequence.
sequence version: NZ_CP069373.1
sequence date: 2022-09-07
sequence: sequence
division: CON
label: NZ_CP069373.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN17704904
keyword: RefSeq
source: Neotabrizicola shimadae
organism: Neotabrizicola shimadae
taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Neotabrizicola.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP069373.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 15-MAY-2020\nAssembly Method :: Unicycler v. 0.4.7\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 325.0x\nSequencing Technology :: Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/07/2022 01:45:18\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 4,272\nCDSs (total) :: 4,215\nGenes (coding) :: 4,155\nCDSs (with protein) :: 4,155\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 3\nPseudo Genes (total) :: 60\nCDSs (without protein) :: 60\nPseudo Genes (ambiguous residues) :: 0 of 60\nPseudo Genes (frameshifted) :: 9 of 60\nPseudo Genes (incomplete) :: 52 of 60\nPseudo Genes (internal stop) :: 6 of 60\nPseudo Genes (multiple problems) :: 7 of 60\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 32096
topology: linear
so has quality: SO_0000987
location: 1..32096
location: region:1-32096:1
RO_0002162: 2807096

NZ_CP069373
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN17704904
type: BioSample
SIO_000068: biosample

1
title: Rhodobacter shimadae sp. nov., an aerobic anoxygenic phototrophic bacterium isolated from a hot spring
author: Muramatsu, S.
author: Haruta, S.
author: Hirose, S.
author: Hanada, S.
journal: Unpublished

2
title: Direct Submission
author: Muramatsu, S.
author: Haruta, S.
author: Hirose, S.
author: Hanada, S.
journal: Submitted (03-FEB-2021) Biological Sciences, Tokyo Metropolitan University, 1-1 Minami-osawa, Hachioji, Tokyo 192-0397, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32096:1
position: 32096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

feature:1-32096:1:source
so part of: sequence
organism: Neotabrizicola shimadae
mol type: genomic DNA
strain: N10
isolation source: biofilm, Nakabusa hotspring
type material: type strain of Neotabrizicola shimadae
plasmid: unnamed3
country: Japan: Nakabusa Hotspring Nagano
collection date: 2016-05-28

2807096
type: Taxonomy
SIO_000068: taxonomy

JO391_RS21200
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21200
old locus tag: JO391_21180
so part of: sequence
location: 1..945
location: region:1-945:1
so has part: feature:1-945:1:exon
subclass of: SO_0000010

position:945:1
position: 945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-945:1:exon

JO391_RS21200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21200
old locus tag: JO391_21180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011453126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MTGTPAAPAPRPPGTQPSTRPMHEGLYRWSASFDAPALIAAFHDTLQQPEPGVIRNFLGTRIEALVYPPILAGREGMVEPVPDPGNWHADIAEWAAALHSVDKARGSYRIVELGCGWGCWITNMGVAARTRGLQVQLVGVEGDRRHLENAARTLALNGFGPGDWALHHAVAGPRHGKAIFPDPEGQSHWGAEPVFYPDAAQLAEAERSPGLQVLDCMTLADLADGGMIDLLHIDIQGGEADFVEGNAEGLAAHVRRVLIGTHSRVIEGRLIAHFLAAGWRMEMERPAIMELVGGRPDIRIDGVQLWANPALATE
SIO_010081: JO391_RS21200
subclass of: SO_0000673
so part of: JO391_RS21200
location: 1..945
location: region:1-945:1
so has part: feature:1-945:1:exon

WP_259444946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-945:1:exon

JO391_RS21205
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21205
old locus tag: JO391_21185
so part of: sequence
location: 956..2377
location: region:956-2377:1
so has part: feature:956-2377:1:exon
subclass of: SO_0000010

position:956:1
position: 956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2377:1
position: 2377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956-2377:1:exon

JO391_RS21205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21205
old locus tag: JO391_21185
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDHPPLAAVVWPAGQKSLLLRILVEGGVLPRAVLRASAEGAGRLIVETESFPEAVVNRFEAAVAAGKAEDSAAGFYRFASVFFSRLADFRQAWAPAGGDETHLLVARGDLRAAPEIWMRRVLAFLDPSGVPAEEEVRALVQVADQVLKSEPPPDLTAFRHYEADRFAKLERVSLRRDVVQDVFRKFMGRDLDEHGILHFQALASVTRLGEALAKTPEFARRKQRWAASSAERTIIHLHVPKTAGTSLNAILSSNWPAGSILEAHTGDLEPLESLSQEERRKLRVIRGHLQYGLHTMLPQDVVYLCVLRRPGPRIFSFYRYVQRMTTHPLHDVVVQQNLGFGGFLSLAAGQRPDLRNEIDNGQMRRIAGHLTAGAIPRIETFQTAVQHLFAPNMIFGLTEHFSLFLAKLAEQNLLHLPFEMEQNVAPPGPDYASAVAGLTPEERAVHDDFCSWDEELYSMCKTFLFGPSTSED
SIO_010081: JO391_RS21205
subclass of: SO_0000673
so part of: JO391_RS21205
location: 956..2377
location: region:956-2377:1
so has part: feature:956-2377:1:exon

WP_220664816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:956-2377:1:exon

JO391_RS21210
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21210
old locus tag: JO391_21190
so part of: sequence
location: 2382..3794
location: region:2382-3794:1
so has part: feature:2382-3794:1:exon
subclass of: SO_0000010

position:2382:1
position: 2382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3794:1
position: 3794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382-3794:1:exon

JO391_RS21210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21210
old locus tag: JO391_21190
EC number: 2.7.7.13
EC number: 5.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014876620.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]; GO:0008905 - mannose-phosphate guanylyltransferase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
translation: MITPILLCGGSGTRLWPLSRKSYPKQFAHILGDESLFQASARRFVGPGFADPLVVTGNEFRFIVTEQLEACGIRPAGILIEPEGRNTAPAAVAAALEVMRRDPEGIMLLVPSDHAVADPAAFRAAVETGLPAAEAGRIVTFGIAPSRAETGYGWLEAGEPIHPGVHVLTRFVEKPDAARAAELLADPRNLWNAGVFLARASTLVEAFREHAPDILARVSDALGAAETDLNFTRIDAAIWSRVPEDSIDYAVMEKAKNVAVVRFAGHWSDLGGWESVWQESAQDASGNALSANATAIDCAHTLLRSEDPGIELVGIGLSNVVAVAMRDAVMVADISKAQNVKQVVKILKDRGAKQAVQFPVDHRPWGWFETLILADRFQVKRIHVHPGASLSLQSHVHRSEHWIVVKGTARVTVGDEVKLLTENQSVYIPLGAIHRMENPGKVPMVLIEVQTGSYLGEDDIIRYEDIYARK
SIO_010081: JO391_RS21210
subclass of: SO_0000673
so part of: JO391_RS21210
location: 2382..3794
location: region:2382-3794:1
so has part: feature:2382-3794:1:exon

WP_220664817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2382-3794:1:exon

JO391_RS21215
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21215
old locus tag: JO391_21195
so part of: sequence
location: 3942..8720
location: region:3942-8720:1
so has part: feature:3942-8720:1:exon
subclass of: SO_0000010

position:3942:1
position: 3942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8720:1
position: 8720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3942-8720:1:exon

JO391_RS21215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21215
old locus tag: JO391_21195
inference: COORDINATES: protein motif:HMM:NF020137.2
GO component: GO:0005615 - extracellular space [Evidence IEA]
GO function: GO:0005509 - calcium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M10 family metallopeptidase C-terminal domain-containing protein
translation: MAHDSALNPQDTVLLSDALGDDLLYQINSIDSTTVPEETATSSDLDASDDGLSGDLDPELVAALGPDSPEDQTTISVEGPDLGFLRTAAISAAATGPMRATIQAEYSTSGWESQATSGCACPLCGGNSFGGGGVSGGVGAPAAATTLNTLATYLNERNTGSGGADFWDDFWGGGSDVSTPFWNLTASGTNAQNGTITFNVTSANFFDSNGLAGAALQEAIRNALDVYEDVLGINFVETTDVNADLAFGDWDAGFAYANFDRASDGSISRAWVNIGSGWSGNGTIGDYYFHTALHEIGHTLGLGHQGNYNAGQGSLTYGSQAQWQNDTIQYTMMSYWAQANYTQAGYAGSSGAFLGDVNVIGPQIVDWLALDRIYNPQGYGIDDGATTGNTTWGFNSTWTDSVSPPVENTLNDAFSLISTLLDTNTICIVDGGGIDTLDLSGFANNTLIDLRENSASSTTVYFSNVAGLNGNLSTSVGTVIENVVGGAGAETIHGNSAANDMRGGGGNDTIYGYGGADAIYGDAGADWLYAGGTSGDTVYGGEGADRVYGGLNDQTIYGGNGNDTLYGDDAAPTSTVADYISGEGGDDFVLGANAGDTIYGGLGNDSLRGGGGGDTIYGDAGIDTLRGEDGNDVLSPNSSLETGEIYDGGAGNDTLDFSNFGLDYVVNLVSGTFSTGATSTTLIAIEAVNAGSGNDTISTTNNGGETVWGNGGNDSIAGGLNNQTLYGGAGNDSIYGDGFTSQNSGVGDYIDGGDDNDHIEGAGGADTILGGNGNDFITGDRGFVFADNDSLDGGAGTDTVSYQNSTAGVNVTLNGSSNTGGSAQGDTLAGFEVLVGSSLGDTLYGGSTFGATIQGGAGNDSITGGFSSQSLEGGDGNDTLYVGAVEFLDSVSGGAGIDTLDHSAVSAANVSGATFDFAAGVGTVGWSANGTITLSGIEVYLDGAGGNIIVSDGGGNTYYGGDGNDTMRATSGPETMYGGNGTDDLDLSIGNFIYTFDMTTGLATQYSGELFLGFENVTMGSANDTVTGSGGANIINGGGGNDSLDGGGASDTLYGGDGNDTLIGGTGTDTLYGGAGNDRITSDGDSGYYDGGADDDTMLSGIGGETMDGGNGIDLIDHRAFNGNYLFDMTAGTTNFGGELYTNFENVLMGNGADTVTGSDAANSINGGGGDDVLSGGGGDDTILGGAGNDTIYGGSNIGGGDVLNGGAGNDYFVYVSGEGYDNFYGGGGIDTVVLQTFFTDTYQVDLLAGTFAYNGGAPSRDMVSIERVITGDNADSVTGSTAGNRIELAGGNDTSSGGGGNDQIYGGTGNDQLFGGGGNDQLFGLDDNDTLDGSIGADTLFGGNGNDSLNGGNDNDTLNGGAGDDTLNGGTGADDMTGGGGNDTFYVDDLGDTVSELSGPTQGVDLVYTSIDLSLTVLSANVENLFLLGVGNISGTGNTLDNTITGNSGANGLSGLAGNDTLIGGSGNDTATGGNGNDSLNGGNDNDSLNGGAGTDTLLGGSGNDTMSGGADADTFVFAGSFGVDVINDFATGVFGEVISLSGVAAIVSFADLVANHLSEVAGNAVISAGANTITLVGVSASSLLADDFLF
SIO_010081: JO391_RS21215
subclass of: SO_0000673
so part of: JO391_RS21215
location: 3942..8720
location: region:3942-8720:1
so has part: feature:3942-8720:1:exon

WP_220664818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3942-8720:1:exon

JO391_RS21220
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21220
old locus tag: JO391_21200
so part of: sequence
location: complement(8787..9767)
location: region:8787-9767:-1
so has part: feature:8787-9767:-1:exon
subclass of: SO_0000010

position:8787:-1
position: 8787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9767:-1
position: 9767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8787-9767:-1:exon

JO391_RS21220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21220
old locus tag: JO391_21200
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF025025.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MPVLSPEPARPASPPPAPGHVSILLATFNGARWLPAQLESLARQSHVDWSLWVGDDGSGDDTRRIVADFAAGAGRGHEVRLVEGPRQGAAQNFLALLTHPDLPAGPGRFAALCDQDDVWLPGKLARALDRLGQKDAARPVIYGAQSLHIDEEGRPVGRSRRPRGPVSLGNAVVQNMVSGHSCVLNPAALALAREAGRHPGIAFQDWWLSLLVLAAGGEALIDEETVLLYRQHGQNVLGAPVGLGALLHRIGLLFGHDYARWIAGNLAALRASPVDLTPEARAVLDGLSGPAQPGLARLRALRRLGVHRQSGLGTALLWLGAVLGRV
SIO_010081: JO391_RS21220
subclass of: SO_0000673
so part of: JO391_RS21220
location: complement(8787..9767)
location: region:8787-9767:-1
so has part: feature:8787-9767:-1:exon

WP_220664819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8787-9767:-1:exon

JO391_RS21225
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21225
old locus tag: JO391_21205
so part of: sequence
location: 9891..12401
location: region:9891-12401:1
so has part: feature:9891-12401:1:exon
subclass of: SO_0000010

position:9891:1
position: 9891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12401:1
position: 12401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9891-12401:1:exon

JO391_RS21225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21225
old locus tag: JO391_21205
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MAGRVRRLFQRYALRHLELTAPGPVLRDGAGQAIGRVDRIVLTGDHLRVEGHAAADVVILHLGGRERRAVPRARAGGMPAFRLVLPFAPGRPELELRAGDWTGRAALPGFGALRRQAAALALWPGFAARGAQALPAALRWLRHHDMAAREQIKRRMGLNALADDLELDPALLAPPQAEPSPALRGRVQIVMPVYQAFDDLTEALDRLRRHSDLPWHLILVEDASPDPRIRPWLADWVAQVQAAGEGRACLIENPVNLGFIGAVNLGLARARQQAPDSPVVLLNSDAFVPEGWLSRLVAPILADPLVASVTPMSNDAELASVPAICTRTVLEPGEADAIDAVARSLAPGGGQGAGLAEAPTGVGFCMALSPRFLARLPGFDTAFGRGYGEEVDWCQKAVALGGRHLYLPGLFVEHRGGASFGSAAKAELLRRNGAEISRRYPQFDTEVQGFLGTDPLVTGRLALGLAWAAARAGRARVPVHLAHSMKGGAEMDLVRRLKAEVSVRGAAVVLRVGGTFRWQVELHSAAGVTRAGTNDSDLVLRLLSLLPRRRIIYGCGVGDPDPVEIPGLLLALGAGQQIVVQVHDYLPISPSYALVGEGGLWRGLPRPGTTDRAHMQRRPDGRMVDLAEWQAEWGALIAAAARIEVFSEASGEIIAGIWPEVRDRLVLRPHRMLAEVPRLAPPPEGARPVIGVLGNIGPHKGAAVLAELSRRLARNREADLVLIGNLDPAHRLARPARIHGSYRLAEIPALAARYGITCWLMPAVWPETFSFATHEALATGLPVYCFDLGAQGEAVRRAVAAGAPGAAIPLPAERGAAVTAILDHVLHRRRARPVQR
SIO_010081: JO391_RS21225
subclass of: SO_0000673
so part of: JO391_RS21225
location: 9891..12401
location: region:9891-12401:1
so has part: feature:9891-12401:1:exon

WP_220664820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9891-12401:1:exon

JO391_RS21230
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21230
old locus tag: JO391_21210
so part of: sequence
location: complement(12392..13237)
location: region:12392-13237:-1
so has part: feature:12392-13237:-1:exon
subclass of: SO_0000010

position:12392:-1
position: 12392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13237:-1
position: 13237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12392-13237:-1:exon

JO391_RS21230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21230
old locus tag: JO391_21210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009825770.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MMVSADSPPSAALPPPVEPRLRRVGRRRPFASFRSIGALILREMSSSYGRTPGGYAWAILEPVGGIAILSFIFSVLFRNPQLGISFPLFYATGMLPFMMFSTVNTKVAQALNYSRPLLAYPSVTYLDAILARFILNFLTELMVAYIVFTGIILMFDTRVILDFPSLGLAFALAGALALGVGVLNCFLMTAFPLWQQAWSILMRPMFILSGIMFIYDAVPEPVRDWFWYNPLIHIVGITRRGIYASYDAPYASPLYVMSIAGACGLAGLFLLWRYHRLLLQR
SIO_010081: JO391_RS21230
subclass of: SO_0000673
so part of: JO391_RS21230
location: complement(12392..13237)
location: region:12392-13237:-1
so has part: feature:12392-13237:-1:exon

WP_259444947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12392-13237:-1:exon

JO391_RS21235
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21235
old locus tag: JO391_21215
so part of: sequence
location: 14044..15150
location: region:14044-15150:1
so has part: feature:14044-15150:1:exon
subclass of: SO_0000010

position:14044:1
position: 14044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15150:1
position: 15150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14044-15150:1:exon

JO391_RS21235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21235
old locus tag: JO391_21215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011840036.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHARHWLLAASFLAMVVLPLVVAAWYLYARAVDEYASTVAFSVRREEQGSALEIFGGLSALSGTSSSSDTDVLYEFLQSQKLVEDLNSQLDLRALWSGPRAEDPVFAFDPSGTIEDLVKYWNRMVQVNYDSASGLIEVRVLAFTPEDATRIAQGLFDQSADMVNDLSAVAREDAISYARDDLTAAEDRLRAAREAVTVFRNRNQIIDPALDLQSQAGLLGTLQGQLAEALIELDLLRETAAASDPRITQLERRVEVIKNRIAAERDKLGIGVTEAGDTVYADIVAEYERLTVDREFAEKSYVSALAAYDAAKAEARRKNRYLAAHVLPTHAESSRYPERGTILAVVGVFLFLAWAIAILVAWSIKDRR
SIO_010081: JO391_RS21235
subclass of: SO_0000673
so part of: JO391_RS21235
location: 14044..15150
location: region:14044-15150:1
so has part: feature:14044-15150:1:exon

WP_220664821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14044-15150:1:exon

JO391_RS21240
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21240
old locus tag: JO391_21220
so part of: sequence
location: 15175..15831
location: region:15175-15831:1
so has part: feature:15175-15831:1:exon
subclass of: SO_0000010

position:15175:1
position: 15175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15831:1
position: 15831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15175-15831:1:exon

JO391_RS21240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21240
old locus tag: JO391_21220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008227307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIRFENLTKIFSLEGRRKTVADNICATFPAGKAVALLGRNGTGKSTLLQMIAGTIEPTRGRIVSTGTISWPVGFAGSFHPDMSGLQNTRFVARIYGADSDELADFVEAFAELGPHFHLPVRTYSSGMRSRLAFGVSMGIRFDTYLVDEVTAVGDAAFRARSDQIFRERMRESGAVMVTHSMSQVRQTCDAAAVLENGQLTYYDAVEEAIAHHERNMRG
SIO_010081: JO391_RS21240
subclass of: SO_0000673
so part of: JO391_RS21240
location: 15175..15831
location: region:15175-15831:1
so has part: feature:15175-15831:1:exon

WP_220664822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15175-15831:1:exon

JO391_RS21245
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21245
old locus tag: JO391_21225
so part of: sequence
location: 15953..18646
location: region:15953-18646:1
so has part: feature:15953-18646:1:exon
subclass of: SO_0000010

position:15953:1
position: 15953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18646:1
position: 18646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15953-18646:1:exon

JO391_RS21245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21245
old locus tag: JO391_21225
inference: COORDINATES: protein motif:HMM:NF025314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4214 domain-containing protein
translation: MGTDPFRLVGTLSDAGAAWFAGIGTLVLADTAFGGRLFALSPGGDLLLWSDPETGLYTAGQAVVTTGQAWTGTPLLAQLTLGGGRALAMRDSDGNTVLRWLDDRGGISGPDVLLHGVGAVNRIGSAAMTGGADLLYWTAPGTPGVSLALRSAAGVVTPLSRLAVDGGGDGSDISDIAVITRGGSVFLCVASRGADSVTLLQLDRTSGAMLAATRLSPAENLAVDQPARLVTLQSGGRDYLLIGAAGTSSITVAELTAAGRLAVTDQVGDDLFSRFQGMTVLKAATIGDRSFIIAGGADDGLSLMTLLPGGRLLQLGVIADSTAMALDNPSALTVRAAAGGGLDLFVASGSESGLTRLHVDTGSLAPVLRAAASGSKLAGDARNDLLVGGAGEDKLDGGAGNDILVDGAGRDTLTGGSGADVFVMTADGALDRIAGFTPGEDRLDLSAYGRVYSRDAFSFHSIAGGVELRFGDERLQLFSTDGRGIDPASLGDRDLLDLWHIPVVPVSTSGVRIEGGAAADLLFGTSGNDTMTGGAGRDSLSGGAGEDLVLGQAQDAGFDPFAAQVYRLYRATLDRPPEATGLLGWSGRLAAGMTLQEAAAGFVASREFQLRYGATTDAQFVTLLYNNVLDRAPDPTGFAAWTRAMANGMSRERVVLGFSESQEFRKTTAPETLGASRAGLQADWADDVYRLYRATLDRPPEAAGLLHWSGQMAAGMTPLAAAAGFVASREFQLRYGATTDAQFVTLLYNNVLDRAPDPTGFATWTRAIANGMSRERVVLGFSESQEFRKTTAAALTDWMRAFLPDDQLSVSPGADLLMGGIGADSFVLAPGLGSGHRVADLEPWDRIDLTAFGYADAAAALAHVTTTAAGTLFSDQGVSVTFCDIAPSSITAEMLLI
SIO_010081: JO391_RS21245
subclass of: SO_0000673
so part of: JO391_RS21245
location: 15953..18646
location: region:15953-18646:1
so has part: feature:15953-18646:1:exon

WP_220664823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15953-18646:1:exon

JO391_RS21250
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21250
old locus tag: JO391_21230
so part of: sequence
location: complement(18827..19855)
location: region:18827-19855:-1
so has part: feature:18827-19855:-1:exon
subclass of: SO_0000010

position:18827:-1
position: 18827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19855:-1
position: 19855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18827-19855:-1:exon

JO391_RS21250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21250
old locus tag: JO391_21230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MASAVGLGASGRRGLAPDRHGGDVFVCDIFDALPKDDIGSMEHPVFSLSTRPDLRVLEYAHNGVTVTVVPSVRGLATMFDKDILIYCISQLMAALNAGRPVSRELRLTAHDLMMATNRETSGDGYQRLREAFERLAGTRITTNLVTGGVEATTGFGLIESWQILRATKGGRMVQVAVTLSDWLYRAVLSHSVLTLSRDYFRLRKPLERRVYELARKHCGRQPEWRVGMGTLAKKSGSASPLRVFRRMIRDMVAEDHLPEYRLAEEPGDILRVTRRDLVILPGEGPLLKSATLETAREMMPGWDVHALEAEWRAVWAATGRPKLRAPDAAFLGWLRKRGAASR
SIO_010081: JO391_RS21250
subclass of: SO_0000673
so part of: JO391_RS21250
location: complement(18827..19855)
location: region:18827-19855:-1
so has part: feature:18827-19855:-1:exon

WP_220664824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18827-19855:-1:exon

JO391_RS21255
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21255
old locus tag: JO391_21235
so part of: sequence
location: 20295..21680
location: region:20295-21680:1
so has part: feature:20295-21680:1:exon
subclass of: SO_0000010

position:20295:1
position: 20295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21680:1
position: 21680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20295-21680:1:exon

JO391_RS21255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21255
old locus tag: JO391_21235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017929929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTRESADAPPPYFNISPDAALADLAPAVGTGTLAEIAAACARGRADLASRGLGEEGRKSLRLFSAWEITRYLIPVAPGHFRRVLKQNPDLPQGRAETEAGARWFTFDEVLRLRAHFAAEGSARKEYLPYRPAGLPAKIVAVANFKGGVGKTSTCAHLAMSAALDGYRVLVIDLDSQGSMTSIFGGRVADEWQTVFPLIAGHYARHLQVENRARVGRGEAPVALDATLSEALKIAPDSLVQKTHWPNIDLIGSQLNLYWAEFQIPVWRMQARGWKLWDALAEALAEGGLLDRYDLIFLDTPPALGYLTINGLAAADILLVPLGASFLEFDSTGRFFDMLHSTFSSIEEGENTAARALGRPELAFEWDAVRCLVTRYDGSQQAELSGLMQAYLGRSLTPQRQDFTALIGQAGEQVNGIYEADYRDFNRDTYIRGRETFDVTWAAFKRLLYGIWRRDELEAEAA
SIO_010081: JO391_RS21255
subclass of: SO_0000673
so part of: JO391_RS21255
location: 20295..21680
location: region:20295-21680:1
so has part: feature:20295-21680:1:exon

WP_220664825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20295-21680:1:exon

JO391_RS21260
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21260
old locus tag: JO391_21240
so part of: sequence
location: 21787..22884
location: region:21787-22884:1
so has part: feature:21787-22884:1:exon
subclass of: SO_0000010

position:21787:1
position: 21787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22884:1
position: 22884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21787-22884:1:exon

JO391_RS21260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21260
old locus tag: JO391_21240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MAKRRRLTPAQSDYLGAPGVLETKAWGAPPVRPGLEASAIAPPPIAPPPIAQVAGEASAVAALAEVSGALAAARAEGRLVQRLALDAVEIDYLVRDRLGIDAEEMAALMESIRLHGQRTPIEVTETAPGRYGLISGWRRLTALRQLAEETGEARFDTVLALLRRPETAGAAYVAMVEENEIRLGLSYYERARITGRAVEQGVFADDRSALQALFAAASRAKRSKIGSFLRIWRALDGSLRFPAAIPERLGLALAARLDADPDFPGQLLRDLGARSAATAEEELARLAAALEAPAPPPGAAPRPVASPTPDPVPRPAPPDPGTREIRPGVFLRVEGGFTRPVLIVAGPAVDPAFRERLEAWLANPD
SIO_010081: JO391_RS21260
subclass of: SO_0000673
so part of: JO391_RS21260
location: 21787..22884
location: region:21787-22884:1
so has part: feature:21787-22884:1:exon

WP_220664826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21787-22884:1:exon

JO391_RS21265
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21265
old locus tag: JO391_21245
so part of: sequence
location: 23172..24083
location: region:23172-24083:1
so has part: feature:23172-24083:1:exon
subclass of: SO_0000010

position:23172:1
position: 23172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24083:1
position: 24083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23172-24083:1:exon

JO391_RS21265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21265
old locus tag: JO391_21245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018701290.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MILLTGATGLLGSAIRQNLDRTGGAYVCTSRDAVDLTDFNSTLAFFQEHRPTSVVHSAARVHGLMGNSRFPAEIFDENLTINYNVIAAGYRTGVRKFNVASTVAAYPGELTENIHESQYLMGEPHAGESAYAHSKRAMLAQLEAYAKQYGISYSYAIFTNLYGPGDRFDTENGHVVPSLVAKFHHAARTGTAVPVWGRGRAQRDFIYIDDAAAAMLHVAETGEGRFNIATGTTVPIAEVVQILSDISGVRDIQWQHEKPEGQLTRSYDVSRLRATGFAPRFSLHEGLERTYRWYEQNWPDVRT
SIO_010081: JO391_RS21265
subclass of: SO_0000673
so part of: JO391_RS21265
location: 23172..24083
location: region:23172-24083:1
so has part: feature:23172-24083:1:exon

WP_220664827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23172-24083:1:exon

JO391_RS21270
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21270
old locus tag: JO391_21250
so part of: sequence
location: 24131..24349
location: region:24131-24349:1
so has part: feature:24131-24349:1:exon
subclass of: SO_0000010

position:24131:1
position: 24131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24349:1
position: 24349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24131-24349:1:exon

JO391_RS21270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21270
old locus tag: JO391_21250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTVFLHIGLPKTGTSLVQRRGRAFFGAANLIFLRFEWLCQAGRREFHAVSEMQVALNRERDCGLRRLASA
SIO_010081: JO391_RS21270
subclass of: SO_0000673
so part of: JO391_RS21270
location: 24131..24349
location: region:24131-24349:1
so has part: feature:24131-24349:1:exon

WP_220664828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24131-24349:1:exon

JO391_RS21275
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21275
old locus tag: JO391_21255
so part of: sequence
location: 24390..27890
location: region:24390-27890:1
so has part: feature:24390-27890:1:exon
subclass of: SO_0000010

position:24390:1
position: 24390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27890:1
position: 27890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24390-27890:1:exon

JO391_RS21275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21275
old locus tag: JO391_21255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MDMTADHPAALAKLQAYFDQVLGEAAGAPRRATIAVPLTWPEIRNAEYEVIKRFCNAAERIGSRIIVTDNNGYPVWSSDDAPVDKTRQLGPDDVDFMISLHFESPRLIDVPSYYAIWQPVDFYFDFGYEPSVAKLLTHSDGLSCSADPSDAHFQALMASCGRNRPGHLPYLFHSPSGPYFEPKITEESRLFYIGINWERLGQSKKGRFHELLRLLDDEKLIDIYGPRTFLGAKPWEGYDCYRGELPFDGKSVVRALHNSGICLAMSSKAHQDSGVMSNRLFEGLAAGTAIIANPHPFIDKYFSDLVYQVDDTVGDEEIFFQITDIITEIRADPEAANERARKGQERLRDLFSLEKCLQALITQHPARTAARRGPDAAPITVIFPYAGQRLSAVREVLEDLKAQAGVAIELVLVWDPVFAEGAGKALIEAAQAHFPRVTVITDVFHQDALQPTLGAALHAARGHVTTEAFAVVSTGERFFRDHFRSLAQALTVPGGRARVLAAASGQLDEDYEGAKRDLFVRRTVAGLNMPSDPRDVLVNSDLWRTPGRYLFSAGLLTSAGAEVLPLLDDGATGYLLLQTLIGGRVAQTGEAGYVRIIPDAVTRMPSAQRIARQQQFLRDTLRFDPLPGLPPVPPVTGTGLNGDLAVAPFVPRIFLDEMMDVRTGSAALQYLDTGFSHPEAGGIWIDGGVGTLRFRIANAGKIEDMQIALMLAGRPALADNRPQHVTVAVNGMTLGYFQLSAQPVAITVRLPVGLAKAEVLQVRIIADHAEPVRNAEGAIVDPRRLGILLTGVGIFRSAKVPLPELAPDLDYDLRRTGNGRPLLVEGCFPEEELTWLSDGPALLRFRIRERMPKMRLELDLIAVSSETQHEPIELTCKINDMPVARFKVGERMSTHVIPLPAEAMGDMGNCELTLEPSHAVRMYGGNRILSVGLRRLRLSNLDPIEPDVEYLTTSTGNGKSFLREGFSKIEPVATWIDGDKARIEGRLEPGEFSGEAMHLEIRAGSRAAADGEPHRCRVMLNGEELGTITLDPVKVITARLPLPPTFVTDKEADLRIGLELEAPALPVMDPVTKKVLDPRRLGMNLLAFRLATGEIQPEPEADLAADADQTEEDGDEPAKATKGRTEDAGSAKATKGRRTARAGRVSGHTNSGPVSSGPVSASDKES
SIO_010081: JO391_RS21275
subclass of: SO_0000673
so part of: JO391_RS21275
location: 24390..27890
location: region:24390-27890:1
so has part: feature:24390-27890:1:exon

WP_220664829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24390-27890:1:exon

JO391_RS21280
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21280
old locus tag: JO391_21260
so part of: sequence
location: 27893..28102
location: region:27893-28102:1
so has part: feature:27893-28102:1:exon
subclass of: SO_0000010

position:27893:1
position: 27893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28102:1
position: 28102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27893-28102:1:exon

JO391_RS21280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21280
old locus tag: JO391_21260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANETQAADDDKKAGNQVAARLARVLYARANPGKVSKDAWEAARADYLKQARQLMRALEKQGLSITLAA
SIO_010081: JO391_RS21280
subclass of: SO_0000673
so part of: JO391_RS21280
location: 27893..28102
location: region:27893-28102:1
so has part: feature:27893-28102:1:exon

WP_220664830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27893-28102:1:exon

JO391_RS21285
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21285
old locus tag: JO391_21265
so part of: sequence
location: 28159..28596
location: region:28159-28596:1
so has part: feature:28159-28596:1:exon
subclass of: SO_0000010

position:28159:1
position: 28159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28596:1
position: 28596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28159-28596:1:exon

JO391_RS21285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21285
old locus tag: JO391_21265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESFPARRESFCAQQTLIRSGTLGQMDEPGKLISGFRHPWPGDKCAKGRDSEKYSALYRPKETGILFLFGSSLPETDFSGVSLQNLCSPFCEMDNTGEILRMAGHEKMTGFNKGQAAATYRLQGRDRLSITPPTGKRDKVEIGAL
SIO_010081: JO391_RS21285
subclass of: SO_0000673
so part of: JO391_RS21285
location: 28159..28596
location: region:28159-28596:1
so has part: feature:28159-28596:1:exon

WP_220664831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28159-28596:1:exon

JO391_RS21290
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
gene: gmd
locus tag: JO391_RS21290
old locus tag: JO391_21270
so part of: sequence
location: 28593..29606
location: region:28593-29606:1
so has part: feature:28593-29606:1:exon
subclass of: SO_0000010

position:28593:1
position: 28593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29606:1
position: 29606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28593-29606:1:exon

JO391_RS21290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
gene: gmd
locus tag: JO391_RS21290
old locus tag: JO391_21270
EC number: 4.2.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676863.1
GO function: GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
translation: MKKAFITGITGQDGAYLSKFLLEKGYEVHGGVRRISQPETVRLEQVGVLKDVIIHDFDLSEPYNIVRVLQTVAPDEVYNLGAQSFVGSSWDLPVYAADVNGIGVLRILDALRTFAPQTRFYQASTSEMFGLVQAVPQSETTRFYPRSPYGVAKVYGHYITMNYRESFGMHASSGILFNHESPLRGKEFVTRKITLALARLARGGTDTLVLGNLDAKRDWGFAGDYVKGMWMMLQQPEADDYVLATGVTTPIRDFVRFAAEALGMDPVFEGEGVEETATDRKTGKRIVEISEKFFRPAEVDLLIGDPTKARTRLGWQPEVTVRQLAEMMAKSDYDALG
SIO_010081: JO391_RS21290
subclass of: SO_0000673
so part of: JO391_RS21290
location: 28593..29606
location: region:28593-29606:1
so has part: feature:28593-29606:1:exon

WP_220664832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28593-29606:1:exon

JO391_RS21295
type: Gene
subclass of: SO_0000704
RO_0002162: 2807096
locus tag: JO391_RS21295
old locus tag: JO391_21275
so part of: sequence
location: 29593..>32096
location: region:29593-32096:1
so has part: feature:29593-32096:1:exon
subclass of: SO_0000010

position:29593:1
position: 29593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29593-32096:1:exon

JO391_RS21295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2807096
locus tag: JO391_RS21295
old locus tag: JO391_21275
inference: COORDINATES: protein motif:HMM:NF012744.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MPLAKALRGQVARLVHAMRPYRGNVDGVFDGALTGWVLPRDPAAGPVRVGLYTRRGLLAQGVANIFRGDLKEAGIGTGHHAFALPLPPALLRTIAEDGGRVTVRVLDRTEFILGNQILLVPGAGVLPAGAADRGDPLERLLYGDLQRWRALLEARAGMSLDCLPGEAGWPDLPADAPHRRMFSRSDYLTGGELPPGMTAYGDYVRYRYKLDRQFDLAEEAETAHFQNWYVAGYSTLRKGLRVPMSQELIAWWNGPVVIPGQRTTITRATWSFILGVPPLLHSMDFGNANWLDWVTFWWSVRQARAMNVEDCLVPEAYAERLRRVPEAWEGKPDAPSEFMLRLHAETPELAGFVLEDRAARLRLGAVIALMAAQRPDYLRFLPEGLLGRLFEGQAPLLPALWRELAGEGAPELDRPAFEAALRLQGFDPVGLRFLNFTAGGDRLEAAILPAPPRDETPVDIQIIGPFEKASGLGQATRLSAEVLSRTGWSVNCVNFGLDNPAPEGFSRVGDLSGYRRAKVNLIHLNGESIPLAFAYQPDVFSGAYNIGYFFWELDSPAACHYLGMNMLDEIWVSTEYGVSIFRPNAPGPVTNVGMCFEDLPEIDRDEARAYLQRKTGFSGREFVFFVAFDSFSFVQRKNPLGTLKAFARAFEGVRDVRLVIKTQNRRKVADPAQLRIWEKVDALVAADKRITVIDETLSYDDLLRLKKGADCYISLHKSEGWGFGMIEAMNLKLPVVCTAYSGNMDFCSEETAFLVGYQEVELEDDDYIFVLPGQKWAEPDIADAARQMRLVHDDAALRQAKAEAGHAYVRTHFSAEAISRRYAARMEEIMKGLEA
SIO_010081: JO391_RS21295
subclass of: SO_0000673
so part of: JO391_RS21295
location: 29593..>32096
location: region:29593-32096:1
so has part: feature:29593-32096:1:exon

WP_220664833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29593-32096:1:exon