Brevibacillus composti strain FJAT-54423 plasmid unnamed1, complete sequence.
Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.
strain FJAT-54423T represents a novel species of the genus Brevibacillus
Submitted (16-DEC-2020) Fujian Academy of Agricultural Sciences, Agricultural Bio-resources Research Institute, 247 Wusi Road, Fuzhou City 350000, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP066309.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2.3\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 120.0x\nSequencing Technology :: Illumina NovaSeq; Oxford Nanopore\n PromethION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/02/2022 01:29:07\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,467\nCDSs (total) :: 4,316\nGenes (coding) :: 4,227\nCDSs (with protein) :: 4,227\nGenes (RNA) :: 151\nrRNAs :: 9, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 10, 10 (5S, 16S, 23S)\ntRNAs :: 116\nncRNAs :: 6\nPseudo Genes (total) :: 89\nCDSs (without protein) :: 89\nPseudo Genes (ambiguous residues) :: 0 of 89\nPseudo Genes (frameshifted) :: 32 of 89\nPseudo Genes (incomplete) :: 69 of 89\nPseudo Genes (internal stop) :: 8 of 89\nPseudo Genes (multiple problems) :: 19 of 89\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_016822651.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013540.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018783082.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF019450.2
copper amine oxidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015354.2
COORDINATES: similar to AA sequence:RefSeq:WP_001293227.1
COORDINATES: protein motif:HMM:NF024803.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]