Maniola hyperantus chromosome 18, iAphHyp1.1, whole genome shotgun sequence.
type: Entry
definition: Maniola hyperantus chromosome 18, iAphHyp1.1, whole genome shotgun sequence.
sequence version: NC_048553.1
sequence date: 2021-01-28
sequence: sequence
division: CON
label: NC_048553.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA637620
dblink: SAMEA994723
keyword: WGS
keyword: RefSeq
source: Maniola hyperantus (ringlet)
organism: Maniola hyperantus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Satyrinae; Satyrini; Maniolina; Maniola; Aphantopus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR761665.1.\nAssembly name: iAphHyp1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the SC on 2020/02/22. The\noriginal whole-genome shotgun project has the accession\nCADCXM000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Maniola hyperantus Updated\n Annotation Release 100.20201218\nAnnotation Version :: 100.20201218\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 13795885
topology: linear
so has quality: SO_0000987
location: 1..13795885
location: region:1-13795885:1
RO_0002162: 2795564

NC_048553
type: RefSeq
SIO_000068: refseq

PRJNA637620
type: BioProject
SIO_000068: bioproject

SAMEA994723
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13795885:1
position: 13795885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-13795885:1:source
so part of: sequence
organism: Maniola hyperantus
mol type: genomic DNA
chromosome: 18

2795564
type: Taxonomy
SIO_000068: taxonomy

LOC117990784
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1050..11518)
location: region:1050-11518:-1
so has part: feature:1050-11518:-1:exon
subclass of: SO_0000010

117990784
type: Gene
SIO_000068: ncbigene

position:1050:-1
position: 1050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11518:-1
position: 11518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050-11518:-1:exon

LOC117990784
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990784
product: protein serrate-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978277.1
SIO_010081: LOC117990784
subclass of: SO_0000673
so part of: LOC117990784
location: complement(join(1050..1633,1957..2550,4653..5144,5218..5313,5385..5517,5708..6066,6150..6689,6769..7417,11007..11102,11414..11518))
location: region:1050-11518:-1
so has part: feature:11414-11518:-1:exon
so has part: feature:11007-11102:-1:exon
so has part: feature:6769-7417:-1:exon
so has part: feature:6150-6689:-1:exon
so has part: feature:5708-6066:-1:exon
so has part: feature:5385-5517:-1:exon
so has part: feature:5218-5313:-1:exon
so has part: feature:4653-5144:-1:exon
so has part: feature:1957-2550:-1:exon
so has part: feature:1050-1633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11414-11518:-1:exon

position:11414:-1
position: 11414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11007-11102:-1:exon

position:11007:-1
position: 11007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11102:-1
position: 11102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6769-7417:-1:exon

position:6769:-1
position: 6769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7417:-1
position: 7417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6150-6689:-1:exon

position:6150:-1
position: 6150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6689:-1
position: 6689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5708-6066:-1:exon

position:5708:-1
position: 5708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6066:-1
position: 6066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5385-5517:-1:exon

position:5385:-1
position: 5385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5517:-1
position: 5517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5218-5313:-1:exon

position:5218:-1
position: 5218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5313:-1
position: 5313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4653-5144:-1:exon

position:4653:-1
position: 4653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5144:-1
position: 5144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1957-2550:-1:exon

position:1957:-1
position: 1957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2550:-1
position: 2550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1050-1633:-1:exon

position:1633:-1
position: 1633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990784
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990784
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein serrate-like
translation: MRGVGTCAPHAYSFRMPARRAHADTVSRQACGPSLCAVAPPTWARNAAHHVTSFPTRYLQLSPQQMEWQHTSASRSCTRVVLLQCAAGAGVFELQILEFSNYRLQLASGACCGGTARAHDACAAPCRTRFALCLKEYQSAAAPGACSFGRAASPVLGTDSFTLADPLYTLALPFSFRWTRSFTLVLQAYDDAAPPGDDDEPGLIEQAWWSGIVEPGAEWHALRHAGAAASVAYRVRVTCQPNYYNATCTTFCRARDDKFGHYACSADGGKRCLPGWQGDNCEKPVCKEGCHATHGRCDRPGECLCRPGWRGELCAQCTPYPGCKHGYCNGSSWDCTCDTNWGGILCDQDLNYCGTHEPCRHGGTCENTAPDQYLCTCAEGFSGADCERVDNPCAPQPCAHGACALAPTGFTCACERGWGGARCDVDVDDCASAPCRHGAACRDRLDAFQCDCAAGWQGPTCADDVDECATRGGAEGALGPCVNAAACNNTQGGYACTCLAGWSGRDCELNVDDCTGQCLHGATCIDLVDDFHCACAAGYAGRTCARDVDDCASRPCRHGGECVDLLDAYRCICPVGFSGADCEDDRDHCAGSPCGNGAPCYTAQSDYFCHCTPGWTGKNCTQRASRDQVDECSPSPCHNNGSCVAAPAGPACVCLAGWTGDTCSARVEAACEPPCANGGSCVRGAAPAAPAHCACAPGWAGAACDASVAPSAPAACACLHGGSCEARAGAWACACRPGWEGARCERAAPGCASAPCRHGARCVGGAGWWGCECAPGWAGADCGAPACDPACPAPAECRAAGAGDAPRCVCPAPPGRVARRCLELIAGLGAEGGEAAGEAGEAGEADEADEAGGEAAAGAAGGACGADNGTWWWGCNACRCTTAAPVCTRLWCGLPDCLAPGAPPCRADEVCVPAAPALCLRAPCAALGECRRVAGRRVEPPALPAPAACWPGARAAVPPGCARAELRLARERLAPGAHVERACGALRRALAAALAERVPAPPLTLLCDLAPDDDDALDLAIWAGEEDEGADVLAAAVRALSELVARRRLAQHALLAAALRLRVQPRRAARRARRRAAAGGALLALAGAAPLLLLGAGAAAALLLRRRRAAARERRSRDEEKSNNLQNEENLRRYANPLRDEPLPRAHSLYKAQNADARNHTPPRDKELTKRALAPPAAPFAAPPASPLAAPPAAPPPAPPALRHPPPERLTVLV
SIO_010081: LOC117990784
subclass of: SO_0000673
so part of: LOC117990784
location: complement(join(1052..1633,1957..2550,4653..5144,5218..5313,5385..5517,5708..6066,6150..6689,6769..7417,11007..11102,11414..11518))
location: region:1052-11518:-1
so has part: feature:11414-11518:-1:exon
so has part: feature:11007-11102:-1:exon
so has part: feature:6769-7417:-1:exon
so has part: feature:6150-6689:-1:exon
so has part: feature:5708-6066:-1:exon
so has part: feature:5385-5517:-1:exon
so has part: feature:5218-5313:-1:exon
so has part: feature:4653-5144:-1:exon
so has part: feature:1957-2550:-1:exon
so has part: feature:1052-1633:-1:exon

XP_034834168.1
type: Protein
SIO_000068: ncbiprotein

position:1052:-1
position: 1052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11414-11518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11007-11102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6769-7417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6150-6689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5708-6066:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5385-5517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5218-5313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4653-5144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1957-2550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1052-1633:-1:exon

LOC117990785
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16355..17134
location: region:16355-17134:1
so has part: feature:16355-17134:1:exon
subclass of: SO_0000010

117990785
type: Gene
SIO_000068: ncbigene

position:16355:1
position: 16355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17134:1
position: 17134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16355-17134:1:exon

LOC117990785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990785
product: uncharacterized LOC117990785
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034978278.1
SIO_010081: LOC117990785
subclass of: SO_0000673
so part of: LOC117990785
location: 16355..17134
location: region:16355-17134:1
so has part: feature:16355-17134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16355-17134:1:exon

LOC117990785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117990785
translation: MIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQAGNKNTTASSQRASDYWGVMIQTNYYYLNCFNRIPS
SIO_010081: LOC117990785
subclass of: SO_0000673
so part of: LOC117990785
location: 16355..17134
location: region:16355-17134:1
so has part: feature:16355-17134:1:exon

XP_034834169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16355-17134:1:exon

LOC117990374
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990374
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 236812..249773
location: region:236812-249773:1
so has part: feature:236812-249773:1:exon
subclass of: SO_0000011

117990374
type: Gene
SIO_000068: ncbigene

position:236812:1
position: 236812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249773:1
position: 249773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236812-249773:1:exon

LOC117990374
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2795564
nc RNA class: lncRNA
gene: LOC117990374
product: uncharacterized LOC117990374
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004674748.1
SIO_010081: LOC117990374
subclass of: SO_0000673
so part of: LOC117990374
location: join(236812..236822,243532..243534,249675..249773)
location: region:236812-249773:1
so has part: feature:236812-236822:1:exon
so has part: feature:243532-243534:1:exon
so has part: feature:249675-249773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236812-236822:1:exon

position:236822:1
position: 236822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243532-243534:1:exon

position:243532:1
position: 243532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243534:1
position: 243534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:249675-249773:1:exon

position:249675:1
position: 249675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990376
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(242262..253350)
location: region:242262-253350:-1
so has part: feature:242262-253350:-1:exon
subclass of: SO_0000011

117990376
type: Gene
SIO_000068: ncbigene

position:242262:-1
position: 242262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253350:-1
position: 253350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242262-253350:-1:exon

LOC117990376
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2795564
nc RNA class: lncRNA
gene: LOC117990376
product: uncharacterized LOC117990376
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004674750.1
SIO_010081: LOC117990376
subclass of: SO_0000673
so part of: LOC117990376
location: complement(join(242262..242272,246069..246074,253297..253350))
location: region:242262-253350:-1
so has part: feature:253297-253350:-1:exon
so has part: feature:246069-246074:-1:exon
so has part: feature:242262-242272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253297-253350:-1:exon

position:253297:-1
position: 253297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246069-246074:-1:exon

position:246069:-1
position: 246069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246074:-1
position: 246074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:242262-242272:-1:exon

position:242272:-1
position: 242272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990371
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(265672..286324)
location: region:265672-286324:-1
so has part: feature:265672-286324:-1:exon
subclass of: SO_0000010

117990371
type: Gene
SIO_000068: ncbigene

position:265672:-1
position: 265672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286324:-1
position: 286324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265672-286324:-1:exon

LOC117990371
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990371
product: protein kinase C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034977805.1
SIO_010081: LOC117990371
subclass of: SO_0000673
so part of: LOC117990371
location: complement(join(265672..266055,266260..266358,267047..267183,268063..268249,268630..268682,269148..269296,269795..270027,271513..271637,274672..274749,276593..276655,277911..277989,279454..279590,280058..280205,280707..280809,281019..281196,281546..281606,285239..285353,285705..285837,286008..286324))
location: region:265672-286324:-1
so has part: feature:286008-286324:-1:exon
so has part: feature:285705-285837:-1:exon
so has part: feature:285239-285353:-1:exon
so has part: feature:281546-281606:-1:exon
so has part: feature:281019-281196:-1:exon
so has part: feature:280707-280809:-1:exon
so has part: feature:280058-280205:-1:exon
so has part: feature:279454-279590:-1:exon
so has part: feature:277911-277989:-1:exon
so has part: feature:276593-276655:-1:exon
so has part: feature:274672-274749:-1:exon
so has part: feature:271513-271637:-1:exon
so has part: feature:269795-270027:-1:exon
so has part: feature:269148-269296:-1:exon
so has part: feature:268630-268682:-1:exon
so has part: feature:268063-268249:-1:exon
so has part: feature:267047-267183:-1:exon
so has part: feature:266260-266358:-1:exon
so has part: feature:265672-266055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286008-286324:-1:exon

position:286008:-1
position: 286008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:285705-285837:-1:exon

position:285705:-1
position: 285705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285837:-1
position: 285837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:285239-285353:-1:exon

position:285239:-1
position: 285239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285353:-1
position: 285353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:281546-281606:-1:exon

position:281546:-1
position: 281546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281606:-1
position: 281606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:281019-281196:-1:exon

position:281019:-1
position: 281019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281196:-1
position: 281196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:280707-280809:-1:exon

position:280707:-1
position: 280707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280809:-1
position: 280809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:280058-280205:-1:exon

position:280058:-1
position: 280058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280205:-1
position: 280205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:279454-279590:-1:exon

position:279454:-1
position: 279454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279590:-1
position: 279590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:277911-277989:-1:exon

position:277911:-1
position: 277911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277989:-1
position: 277989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:276593-276655:-1:exon

position:276593:-1
position: 276593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276655:-1
position: 276655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:274672-274749:-1:exon

position:274672:-1
position: 274672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274749:-1
position: 274749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:271513-271637:-1:exon

position:271513:-1
position: 271513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271637:-1
position: 271637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:269795-270027:-1:exon

position:269795:-1
position: 269795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270027:-1
position: 270027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:269148-269296:-1:exon

position:269148:-1
position: 269148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269296:-1
position: 269296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:268630-268682:-1:exon

position:268630:-1
position: 268630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268682:-1
position: 268682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:268063-268249:-1:exon

position:268063:-1
position: 268063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268249:-1
position: 268249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:267047-267183:-1:exon

position:267047:-1
position: 267047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267183:-1
position: 267183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:266260-266358:-1:exon

position:266260:-1
position: 266260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266358:-1
position: 266358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:265672-266055:-1:exon

position:266055:-1
position: 266055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990371
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C
translation: MFSGTVRVKVCEATGLRPTDFQKRHNMTFGKPDDQPIDPYVSIDADEHHLDRSNTKPKTFDPVWNETFIHEVQNATNLGFTVFHDAAIPPDDFVANCTIPFEDLMHRDKDATDFWVDLEPQGKLHLKIDLKWNSQPSTGSTSTRAVRGREFKEGAGFNRRRGALRRRVHQVNGHKFMATFLRQPTFCSHCREFIWGLGKQGYQCQVCTCVVHKRCHSSVVTKCPGMKEEQLAVGVSGGQRFSVNVPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCEVCSMNVHKRCQKNVANNCGINTKAMAAILNEMGISPDKNPRPRASKYLNTPLLEGPPDLVSEDGKDPDKQDKSAAPPWESEWAELQDIFTCYEGTLAKQAPVWRSAWDELQDIFGSYEEGGDGAGDAAGIKVALDDFHFIKVLGKGSFGKVMLAEKKGTDEVYAVKVLKKDAIIQDDDVECTLTERRVLALAARHPFLTALHCAFQTPERLFFVMEYVDGGDLMFQIQRARKFDEPRARFYAAEVTLALQFLHSHGVIYRDLKLDNILLDSEGHCKLADFGMCKEGILDGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLLYEMLAGQPPFEADNEDDLFESILHDDVLYPVWLSKDAVSILKGFMTKNPSRRLGVAGGAAGIRAHAFFRDMDWDALAQRRLRPPFRPKKSKREAANFDAEFTKEEPCLTPVPQDVLRAINQEEFKGFSFVNQDFNPTPPAVPLA
SIO_010081: LOC117990371
subclass of: SO_0000673
so part of: LOC117990371
location: complement(join(265984..266055,266260..266358,267047..267183,268063..268249,268630..268682,269148..269296,269795..270027,271513..271637,274672..274749,276593..276655,277911..277989,279454..279590,280058..280205,280707..280809,281019..281196,281546..281606,285239..285353,285705..285837,286008..286104))
location: region:265984-286104:-1
so has part: feature:286008-286104:-1:exon
so has part: feature:285705-285837:-1:exon
so has part: feature:285239-285353:-1:exon
so has part: feature:281546-281606:-1:exon
so has part: feature:281019-281196:-1:exon
so has part: feature:280707-280809:-1:exon
so has part: feature:280058-280205:-1:exon
so has part: feature:279454-279590:-1:exon
so has part: feature:277911-277989:-1:exon
so has part: feature:276593-276655:-1:exon
so has part: feature:274672-274749:-1:exon
so has part: feature:271513-271637:-1:exon
so has part: feature:269795-270027:-1:exon
so has part: feature:269148-269296:-1:exon
so has part: feature:268630-268682:-1:exon
so has part: feature:268063-268249:-1:exon
so has part: feature:267047-267183:-1:exon
so has part: feature:266260-266358:-1:exon
so has part: feature:265984-266055:-1:exon

XP_034833696.1
type: Protein
SIO_000068: ncbiprotein

position:265984:-1
position: 265984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286104:-1
position: 286104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286008-286104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285705-285837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285239-285353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:281546-281606:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281019-281196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280707-280809:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280058-280205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279454-279590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:277911-277989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276593-276655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274672-274749:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:271513-271637:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:269795-270027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269148-269296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:268630-268682:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268063-268249:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267047-267183:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266260-266358:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265984-266055:-1:exon

LOC117990375
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281289..301613
location: region:281289-301613:1
so has part: feature:281289-301613:1:exon
subclass of: SO_0000011

117990375
type: Gene
SIO_000068: ncbigene

position:281289:1
position: 281289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301613:1
position: 301613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281289-301613:1:exon

LOC117990375
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2795564
nc RNA class: lncRNA
gene: LOC117990375
product: uncharacterized LOC117990375
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004674749.1
SIO_010081: LOC117990375
subclass of: SO_0000673
so part of: LOC117990375
location: join(281289..281342,295536..295539,301601..301613)
location: region:281289-301613:1
so has part: feature:281289-281342:1:exon
so has part: feature:295536-295539:1:exon
so has part: feature:301601-301613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281289-281342:1:exon

position:281342:1
position: 281342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295536-295539:1:exon

position:295536:1
position: 295536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295539:1
position: 295539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301601-301613:1:exon

position:301601:1
position: 301601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990373
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 287909..289711
location: region:287909-289711:1
so has part: feature:287909-289711:1:exon
subclass of: SO_0000010

117990373
type: Gene
SIO_000068: ncbigene

position:287909:1
position: 287909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289711:1
position: 289711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287909-289711:1:exon

LOC117990373
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990373
product: ADP-ribosylation factor-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_034977809.1
SIO_010081: LOC117990373
subclass of: SO_0000673
so part of: LOC117990373
location: join(287909..288032,288190..288345,288892..289090,289368..289711)
location: region:287909-289711:1
so has part: feature:287909-288032:1:exon
so has part: feature:288190-288345:1:exon
so has part: feature:288892-289090:1:exon
so has part: feature:289368-289711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287909-288032:1:exon

position:288032:1
position: 288032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288190-288345:1:exon

position:288190:1
position: 288190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288345:1
position: 288345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288892-289090:1:exon

position:288892:1
position: 288892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289090:1
position: 289090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289368-289711:1:exon

position:289368:1
position: 289368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990373
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 2
translation: MGFLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHRGYKLNIWDVGGQKSLRSYWKNYFESTDGVVWVVDSADARRLSDCAKELHTLLREERLAGATLLVLANKVDLPGALTLQEIREALDLDNIKTHHWRIMRCSAVTGENLLEGIDWMLDDIANRIFTLD
SIO_010081: LOC117990373
subclass of: SO_0000673
so part of: LOC117990373
location: join(287968..288032,288190..288345,288892..289090,289368..289502)
location: region:287968-289502:1
so has part: feature:287968-288032:1:exon
so has part: feature:288190-288345:1:exon
so has part: feature:288892-289090:1:exon
so has part: feature:289368-289502:1:exon

XP_034833700.1
type: Protein
SIO_000068: ncbiprotein

position:287968:1
position: 287968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289502:1
position: 289502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287968-288032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288190-288345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288892-289090:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289368-289502:1:exon

LOC117990372
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(293216..297632)
location: region:293216-297632:-1
so has part: feature:293216-297632:-1:exon
subclass of: SO_0000010

117990372
type: Gene
SIO_000068: ncbigene

position:293216:-1
position: 293216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297632:-1
position: 297632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293216-297632:-1:exon

LOC117990372
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990372
product: pinin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034977807.1
SIO_010081: LOC117990372
subclass of: SO_0000673
so part of: LOC117990372
location: complement(join(293216..293235,293780..293862,293905..294024,294558..294914,295918..296212,296577..296796,297217..297351,297422..297632))
location: region:293216-297632:-1
so has part: feature:297422-297632:-1:exon
so has part: feature:297217-297351:-1:exon
so has part: feature:296577-296796:-1:exon
so has part: feature:295918-296212:-1:exon
so has part: feature:294558-294914:-1:exon
so has part: feature:293905-294024:-1:exon
so has part: feature:293780-293862:-1:exon
so has part: feature:293216-293235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297422-297632:-1:exon

position:297422:-1
position: 297422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297217-297351:-1:exon

position:297217:-1
position: 297217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297351:-1
position: 297351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:296577-296796:-1:exon

position:296577:-1
position: 296577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296796:-1
position: 296796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:295918-296212:-1:exon

position:295918:-1
position: 295918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296212:-1
position: 296212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:294558-294914:-1:exon

position:294558:-1
position: 294558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294914:-1
position: 294914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:293905-294024:-1:exon

position:293905:-1
position: 293905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294024:-1
position: 294024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:293780-293862:-1:exon

position:293780:-1
position: 293780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293862:-1
position: 293862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:293216-293235:-1:exon

position:293235:-1
position: 293235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990372
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990372
product: pinin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034977806.1
SIO_010081: LOC117990372
subclass of: SO_0000673
so part of: LOC117990372
location: complement(join(293773..293862,293905..294024,294558..294914,295918..296212,296577..296796,297217..297351,297422..297632))
location: region:293773-297632:-1
so has part: feature:297422-297632:-1:exon
so has part: feature:297217-297351:-1:exon
so has part: feature:296577-296796:-1:exon
so has part: feature:295918-296212:-1:exon
so has part: feature:294558-294914:-1:exon
so has part: feature:293905-294024:-1:exon
so has part: feature:293773-293862:-1:exon

position:293773:-1
position: 293773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297422-297632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297217-297351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296577-296796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295918-296212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:294558-294914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293905-294024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293773-293862:-1:exon

LOC117990372
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pinin
translation: MGTEVAISFSSLRAQLESEKSSLFKIDENIKKIVQTSGRFTDRFNASGDYTRGGSRQAGRNLYPDVANNYKIEDQTRRKHETKTVFSRLSARHDSDGEDDGPGTKRARVPSAVCRELPSRAAVLRAQGDDEQARKRNRRIFGSLLGTLQKFKQEEIVLQTKEDKKAQVERKIEEQARQEKEREQKERKTLFAEREHKKATIKALEAKMARVQEFEKWEASQQCLENFILTKASPNMYWIPKKMSEKAQEKLDASRKYHEKCMSRKRLELQDELRRIEQKCLRPRTFAAKENAQVAHGGERGPGGDAGAQENVAEGEGERGHRRDKFAMDVDDKEGEDSEGEERHEGDKAVKQEKVVKEEKGVKEEKGLKEEKGVDKEKELDQSKMDTSVEPNTSMEVDDTIDTNTNITKDTSATNDTNITNDTNTNDTSVTNEVVNADEVVTVPE
SIO_010081: LOC117990372
subclass of: SO_0000673
so part of: LOC117990372
location: complement(join(293780..293862,293905..294024,294558..294914,295918..296212,296577..296796,297217..297351,297422..297549))
location: region:293780-297549:-1
so has part: feature:297422-297549:-1:exon
so has part: feature:297217-297351:-1:exon
so has part: feature:296577-296796:-1:exon
so has part: feature:295918-296212:-1:exon
so has part: feature:294558-294914:-1:exon
so has part: feature:293905-294024:-1:exon
so has part: feature:293780-293862:-1:exon

XP_034833697.1
type: Protein
SIO_000068: ncbiprotein

position:297549:-1
position: 297549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297422-297549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297217-297351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296577-296796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295918-296212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:294558-294914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293905-294024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293780-293862:-1:exon

LOC117990372
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pinin
translation: MGTEVAISFSSLRAQLESEKSSLFKIDENIKKIVQTSGRFTDRFNASGDYTRGGSRQAGRNLYPDVANNYKIEDQTRRKHETKTVFSRLSARHDSDGEDDGPGTKRARVPSAVCRELPSRAAVLRAQGDDEQARKRNRRIFGSLLGTLQKFKQEEIVLQTKEDKKAQVERKIEEQARQEKEREQKERKTLFAEREHKKATIKALEAKMARVQEFEKWEASQQCLENFILTKASPNMYWIPKKMSEKAQEKLDASRKYHEKCMSRKRLELQDELRRIEQKCLRPRTFAAKENAQVAHGGERGPGGDAGAQENVAEGEGERGHRRDKFAMDVDDKEGEDSEGEERHEGDKAVKQEKVVKEEKGVKEEKGLKEEKGVDKEKELDQSKMDTSVEPNTSMEVDDTIDTNTNITKDTSATNDTNITNDTNTNDTSVTNEVVNADEVVTVPE
SIO_010081: LOC117990372
subclass of: SO_0000673
so part of: LOC117990372
location: complement(join(293780..293862,293905..294024,294558..294914,295918..296212,296577..296796,297217..297351,297422..297549))
location: region:293780-297549:-1
so has part: feature:297422-297549:-1:exon
so has part: feature:297217-297351:-1:exon
so has part: feature:296577-296796:-1:exon
so has part: feature:295918-296212:-1:exon
so has part: feature:294558-294914:-1:exon
so has part: feature:293905-294024:-1:exon
so has part: feature:293780-293862:-1:exon

XP_034833698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297422-297549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297217-297351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296577-296796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295918-296212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:294558-294914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293905-294024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293780-293862:-1:exon

LOC117990435
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 322224..369630
location: region:322224-369630:1
so has part: feature:322224-369630:1:exon
subclass of: SO_0000010

117990435
type: Gene
SIO_000068: ncbigene

position:322224:1
position: 322224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369630:1
position: 369630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322224-369630:1:exon

LOC117990435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990435
product: paired box protein Pax-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034977875.1
SIO_010081: LOC117990435
subclass of: SO_0000673
so part of: LOC117990435
location: join(322224..322367,357294..357447,358225..358357,358895..359137,369435..369630)
location: region:322224-369630:1
so has part: feature:322224-322367:1:exon
so has part: feature:357294-357447:1:exon
so has part: feature:358225-358357:1:exon
so has part: feature:358895-359137:1:exon
so has part: feature:369435-369630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322224-322367:1:exon

position:322367:1
position: 322367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357294-357447:1:exon

position:357294:1
position: 357294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357447:1
position: 357447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358225-358357:1:exon

position:358225:1
position: 358225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358357:1
position: 358357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:358895-359137:1:exon

position:358895:1
position: 358895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359137:1
position: 359137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369435-369630:1:exon

position:369435:1
position: 369435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-1-like
translation: MMLGGMDGKEYGALHAAAAAAGYAMEADPNAGAMGNPGMGAGAQQYGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYHETGSILPGAIGGSKPRVTTPKVVSYIKQLKAKDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKLGGALYPVPPLYPVPPQRCWPLHQPYDYYVYLQGRQHAASAQHGLPHTHAPPPPHHAHAHAL
SIO_010081: LOC117990435
subclass of: SO_0000673
so part of: LOC117990435
location: join(322286..322367,357294..357447,358225..358357,358895..359137,369435..369524)
location: region:322286-369524:1
so has part: feature:322286-322367:1:exon
so has part: feature:357294-357447:1:exon
so has part: feature:358225-358357:1:exon
so has part: feature:358895-359137:1:exon
so has part: feature:369435-369524:1:exon

XP_034833766.1
type: Protein
SIO_000068: ncbiprotein

position:322286:1
position: 322286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369524:1
position: 369524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322286-322367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357294-357447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358225-358357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358895-359137:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369435-369524:1:exon

LOC117990642
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 382591..401818
location: region:382591-401818:1
so has part: feature:382591-401818:1:exon
subclass of: SO_0000010

117990642
type: Gene
SIO_000068: ncbigene

position:382591:1
position: 382591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401818:1
position: 401818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382591-401818:1:exon

LOC117990642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990642
product: high affinity copper uptake protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034978114.1
SIO_010081: LOC117990642
subclass of: SO_0000673
so part of: LOC117990642
location: join(382591..382799,398436..398540,400175..400410,401599..401818)
location: region:382591-401818:1
so has part: feature:382591-382799:1:exon
so has part: feature:398436-398540:1:exon
so has part: feature:400175-400410:1:exon
so has part: feature:401599-401818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382591-382799:1:exon

position:382799:1
position: 382799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398436-398540:1:exon

position:398436:1
position: 398436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398540:1
position: 398540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:400175-400410:1:exon

position:400175:1
position: 400175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400410:1
position: 400410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:401599-401818:1:exon

position:401599:1
position: 401599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity copper uptake protein 1-like
translation: MNHNDMMAAHDHADHDHGDHGDAHSCGGHGHAMVFHAGVEQEILFRGWETTNALELFGSAVAIFLASVLYEGFKYYREALHANAVTPTGDSQVNIAKSECGARGSCAGPAVVKYSMFSSAHVVQTCLHVVQATVSYVLMLVFMTYNVWLCLALVLGLGVGYFCFGWKKSSVVDTNEHCQ
SIO_010081: LOC117990642
subclass of: SO_0000673
so part of: LOC117990642
location: join(398439..398540,400175..400410,401599..401800)
location: region:398439-401800:1
so has part: feature:398439-398540:1:exon
so has part: feature:400175-400410:1:exon
so has part: feature:401599-401800:1:exon

XP_034834005.1
type: Protein
SIO_000068: ncbiprotein

position:398439:1
position: 398439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401800:1
position: 401800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398439-398540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400175-400410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401599-401800:1:exon

LOC117990619
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 404878..491981
location: region:404878-491981:1
so has part: feature:404878-491981:1:exon
subclass of: SO_0000010

117990619
type: Gene
SIO_000068: ncbigene

position:404878:1
position: 404878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491981:1
position: 491981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404878-491981:1:exon

LOC117990619
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990619
product: serine/threonine-protein kinase D1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978075.1
SIO_010081: LOC117990619
subclass of: SO_0000673
so part of: LOC117990619
location: join(404878..405111,419299..419343,474062..474219,474940..475084,475177..475314,475973..476151,478748..478985,480599..480732,484573..484652,485627..485756,486945..487077,487427..487603,488062..488243,488924..489154,489937..490120,490313..490495,491399..491615,491893..491981)
location: region:404878-491981:1
so has part: feature:404878-405111:1:exon
so has part: feature:419299-419343:1:exon
so has part: feature:474062-474219:1:exon
so has part: feature:474940-475084:1:exon
so has part: feature:475177-475314:1:exon
so has part: feature:475973-476151:1:exon
so has part: feature:478748-478985:1:exon
so has part: feature:480599-480732:1:exon
so has part: feature:484573-484652:1:exon
so has part: feature:485627-485756:1:exon
so has part: feature:486945-487077:1:exon
so has part: feature:487427-487603:1:exon
so has part: feature:488062-488243:1:exon
so has part: feature:488924-489154:1:exon
so has part: feature:489937-490120:1:exon
so has part: feature:490313-490495:1:exon
so has part: feature:491399-491615:1:exon
so has part: feature:491893-491981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404878-405111:1:exon

position:405111:1
position: 405111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419299-419343:1:exon

position:419299:1
position: 419299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419343:1
position: 419343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:474062-474219:1:exon

position:474062:1
position: 474062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474219:1
position: 474219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474940-475084:1:exon

position:474940:1
position: 474940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475084:1
position: 475084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:475177-475314:1:exon

position:475177:1
position: 475177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475314:1
position: 475314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:475973-476151:1:exon

position:475973:1
position: 475973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476151:1
position: 476151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478748-478985:1:exon

position:478748:1
position: 478748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478985:1
position: 478985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:480599-480732:1:exon

position:480599:1
position: 480599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480732:1
position: 480732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:484573-484652:1:exon

position:484573:1
position: 484573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484652:1
position: 484652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:485627-485756:1:exon

position:485627:1
position: 485627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485756:1
position: 485756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:486945-487077:1:exon

position:486945:1
position: 486945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487077:1
position: 487077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:487427-487603:1:exon

position:487427:1
position: 487427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487603:1
position: 487603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:488062-488243:1:exon

position:488062:1
position: 488062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488243:1
position: 488243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:488924-489154:1:exon

position:488924:1
position: 488924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489154:1
position: 489154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:489937-490120:1:exon

position:489937:1
position: 489937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490120:1
position: 490120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:490313-490495:1:exon

position:490313:1
position: 490313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490495:1
position: 490495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:491399-491615:1:exon

position:491399:1
position: 491399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491615:1
position: 491615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:491893-491981:1:exon

position:491893:1
position: 491893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990787
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(406407..411898)
location: region:406407-411898:-1
so has part: feature:406407-411898:-1:exon
subclass of: SO_0000010

117990787
type: Gene
SIO_000068: ncbigene

position:406407:-1
position: 406407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411898:-1
position: 411898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406407-411898:-1:exon

LOC117990787
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990787
product: esterase FE4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978279.1
SIO_010081: LOC117990787
subclass of: SO_0000673
so part of: LOC117990787
location: complement(join(406407..406415,406466..407067,408222..408439,409473..409648,411695..411898))
location: region:406407-411898:-1
so has part: feature:411695-411898:-1:exon
so has part: feature:409473-409648:-1:exon
so has part: feature:408222-408439:-1:exon
so has part: feature:406466-407067:-1:exon
so has part: feature:406407-406415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411695-411898:-1:exon

position:411695:-1
position: 411695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:409473-409648:-1:exon

position:409473:-1
position: 409473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409648:-1
position: 409648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:408222-408439:-1:exon

position:408222:-1
position: 408222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408439:-1
position: 408439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:406466-407067:-1:exon

position:406466:-1
position: 406466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407067:-1
position: 407067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406407-406415:-1:exon

position:406415:-1
position: 406415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990787
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: esterase FE4-like
translation: MLDRLRLVLCLFHLLAHSACGAGSPPARHRLAGTTQGAVRGYYAPRPPHYAYRGVPYARPPTAYDRFKAPEPPPPWSGIFEASHRVKCPQPDGSGEENCLVVNVFTPEHAASQPVIVHFHAGGFQQGWGLHNGPKRLLEQGFVFVTFNYRLTVLGFLCLGSPDVPGNAGLKDQVAALYWVNRNIEQFGGNPADVTAYGTGSGAASIELLLFSGLTKDLFHKVILESGSALSPSAISHEPVLNAFNLAKHLGYKDDPERELIQEFFYKVSYKKIVNITTNFLPCIETEYSLNSLLDKDPREYLKSGKYQKVPMMVIYTNAEEISVITGNIDRFNVIPEYFDSLLPNNLIFDSEKVRHKVASVVKEFYFDDLGLTESVLQSYVGYVNDILMEYPVIKSAANHAE
SIO_010081: LOC117990787
subclass of: SO_0000673
so part of: LOC117990787
location: complement(join(406407..406415,406466..407067,408222..408439,409473..409648,411695..411898))
location: region:406407-411898:-1
so has part: feature:411695-411898:-1:exon
so has part: feature:409473-409648:-1:exon
so has part: feature:408222-408439:-1:exon
so has part: feature:406466-407067:-1:exon
so has part: feature:406407-406415:-1:exon

XP_034834170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411695-411898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409473-409648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:408222-408439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406466-407067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406407-406415:-1:exon

LOC117990788
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(413734..424377)
location: region:413734-424377:-1
so has part: feature:413734-424377:-1:exon
subclass of: SO_0000010

117990788
type: Gene
SIO_000068: ncbigene

position:413734:-1
position: 413734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424377:-1
position: 424377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413734-424377:-1:exon

LOC117990788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990788
product: uncharacterized LOC117990788
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978280.1
SIO_010081: LOC117990788
subclass of: SO_0000673
so part of: LOC117990788
location: complement(join(413734..413986,414768..415957,416581..416684,420284..420456,420953..421207,421680..422375,423118..423332,424210..424377))
location: region:413734-424377:-1
so has part: feature:424210-424377:-1:exon
so has part: feature:423118-423332:-1:exon
so has part: feature:421680-422375:-1:exon
so has part: feature:420953-421207:-1:exon
so has part: feature:420284-420456:-1:exon
so has part: feature:416581-416684:-1:exon
so has part: feature:414768-415957:-1:exon
so has part: feature:413734-413986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424210-424377:-1:exon

position:424210:-1
position: 424210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:423118-423332:-1:exon

position:423118:-1
position: 423118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423332:-1
position: 423332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421680-422375:-1:exon

position:421680:-1
position: 421680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422375:-1
position: 422375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420953-421207:-1:exon

position:420953:-1
position: 420953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421207:-1
position: 421207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:420284-420456:-1:exon

position:420284:-1
position: 420284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420456:-1
position: 420456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:416581-416684:-1:exon

position:416581:-1
position: 416581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416684:-1
position: 416684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:414768-415957:-1:exon

position:414768:-1
position: 414768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415957:-1
position: 415957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:413734-413986:-1:exon

position:413986:-1
position: 413986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117990788
translation: MLLLFLVAIACRMHVAYQNIVSTAQGKIRGVLRDGYVAYNGIPYASVSTGPGGRFKRGSLAPVWPNIREPHESHCSSSSAVEDCLQLNVNTPTGSSLPVLAWVTGGRGHYNPTRLVKEGIIVVIVRHRLGPQGFLCSSEDKIPGNAGVKDVVLALRWIRDNIVAFSGNPNKVVVAGQGFGAAMVEALTLTPMAHGLFHGVILQSGTVLAPWAFNFDAENRTKFLKMSLNGSRDMLTRSSAIELSSKVDQLRLPYLPFGMCIENSIKNEERLLSSSPFEILSKGEILSVPMIMGFTNNEGYIFAPTLKEAKVVRRMSKEMSFLLPIELQTRKRDVSKIMKEIDGMYFSDNMTMAAVLAYHRDAYFLSYIDRSARFHAHTHHPVYYYQFSHTGNTGVEEEPGTAKWGAAHSDELAYLFPDKGRGLNGDDGTVQGNLVRLWTNFVKHLNPTPANAKDPVWVPLNPHDPKVLDISTEMEMKEFPFVKEAQMWEDIYEKYYFDRRGRLETTSGSVRGVVDNADGIVQYFDVPYGVFSENPLQEPDKPVKAEDILEKKTHNSQCPQLKNGAYHGDPDCLTLSVFRALEQVKTRSASAAVLFHIHDSSFSTGSADPQVYGSKYLVKNGIILVLPNYRLGALGFLCLRNETAPGNAALKDLTLALKWTVENIALFGGDPSNIVVSGSGAGGALVEYLLMSNISRAYISRAITESGFSLSPWAIDRNPIATASSLPTGILEGTIDLEALVKSSADIEFRPCIEKESGFITESPWLLLKRNQTQLAYMAGTANHAAWGEALRQITTENNLSELNTNFSLSLPNDLVFENNEEKLRVGRQVRSFYFGERDITPTDVNQLSQLLTDTGYLNPGLRGARLLVKGGVTVYFYEYSFNNPDLKLAFDASTRGDSLNFVFSRSGVTTESEEQIQMRDTMTSLWVSFIKKGKPSVAEGISWIQMRDVAPAEEDWLSIGSTVQMQKGLHVNRLRVWQEIYDNYFIDNSPGFVHKPSVYILVSGLSILVRFGVVRG
SIO_010081: LOC117990788
subclass of: SO_0000673
so part of: LOC117990788
location: complement(join(413734..413986,414768..415957,416581..416684,420284..420456,420953..421207,421680..422375,423118..423332,424210..424377))
location: region:413734-424377:-1
so has part: feature:424210-424377:-1:exon
so has part: feature:423118-423332:-1:exon
so has part: feature:421680-422375:-1:exon
so has part: feature:420953-421207:-1:exon
so has part: feature:420284-420456:-1:exon
so has part: feature:416581-416684:-1:exon
so has part: feature:414768-415957:-1:exon
so has part: feature:413734-413986:-1:exon

XP_034834171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424210-424377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423118-423332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421680-422375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420953-421207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420284-420456:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416581-416684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414768-415957:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413734-413986:-1:exon

LOC117990628
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990628
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(430834..448547)
location: region:430834-448547:-1
so has part: feature:430834-448547:-1:exon
subclass of: SO_0000010

117990628
type: Gene
SIO_000068: ncbigene

position:430834:-1
position: 430834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448547:-1
position: 448547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430834-448547:-1:exon

LOC117990628
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990628
product: juvenile hormone esterase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034978092.1
SIO_010081: LOC117990628
subclass of: SO_0000673
so part of: LOC117990628
location: complement(join(430834..431046,431622..432425,434817..435029,440325..440513,441462..441640,442525..442694,448371..448547))
location: region:430834-448547:-1
so has part: feature:448371-448547:-1:exon
so has part: feature:442525-442694:-1:exon
so has part: feature:441462-441640:-1:exon
so has part: feature:440325-440513:-1:exon
so has part: feature:434817-435029:-1:exon
so has part: feature:431622-432425:-1:exon
so has part: feature:430834-431046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448371-448547:-1:exon

position:448371:-1
position: 448371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442525-442694:-1:exon

position:442525:-1
position: 442525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442694:-1
position: 442694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:441462-441640:-1:exon

position:441462:-1
position: 441462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441640:-1
position: 441640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:440325-440513:-1:exon

position:440325:-1
position: 440325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440513:-1
position: 440513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:434817-435029:-1:exon

position:434817:-1
position: 434817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435029:-1
position: 435029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431622-432425:-1:exon

position:431622:-1
position: 431622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432425:-1
position: 432425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:430834-431046:-1:exon

position:431046:-1
position: 431046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990628
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990628
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: juvenile hormone esterase-like
translation: MLLYSCVVSVFTIFAVHAQGAPRSLQEGAPCEVRARLEAGWVCGVKRVADNRTIFASFLGVAYASQPVDERRFSELEPVVPWDEFYDASAEGPICPQHDVFYGPLQDSTNMSEACIYANIHVPIDALPGYNILRPARHLQPPYEAGLADGEVEEDPGLPILVFIHGGGFAFGSGGTGLHGPEYLMHRDVIVITFNYRLNVFGFLSLNSTSIPGNNGLRDAVTLLKWVQANARSFGGDPSDVTLAGQSAGASMVHLLTLSTAAEGLFRRAILMSGTGIRSFHTTSPVYAEIVANLFLSNLGLNATDPEDIHQQLVKMPLQDIMEANKLVQDTLGIIAFLPVVESPFPGFTTILDNDPEILVSKGYGKDIPLIIGSTNKECESFRPNFEKFDILSRIMENPTLILSPDLLFKVPPKVAVDMAKRTIKRYFNEEPTMDKYLKSCSDTFYVYPALKLAEKRALQHGAPVFLYQFTYTADFSAIKESKGLKFKGAGHVEDMTFVFRPNSMEGTKGFSPPTPTDQLMAGWMTKFVKNFMYCNDPACNQYPLSMWPPVDKDTLPPNYQEIEMPMFVHFTEIPREQQEMMEFFDSLQNQTS
SIO_010081: LOC117990628
subclass of: SO_0000673
so part of: LOC117990628
location: complement(join(430872..431046,431622..432425,434817..435029,440325..440513,441462..441640,442525..442694,448371..448422))
location: region:430872-448422:-1
so has part: feature:448371-448422:-1:exon
so has part: feature:442525-442694:-1:exon
so has part: feature:441462-441640:-1:exon
so has part: feature:440325-440513:-1:exon
so has part: feature:434817-435029:-1:exon
so has part: feature:431622-432425:-1:exon
so has part: feature:430872-431046:-1:exon

XP_034833983.1
type: Protein
SIO_000068: ncbiprotein

position:430872:-1
position: 430872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448422:-1
position: 448422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448371-448422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442525-442694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441462-441640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:440325-440513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434817-435029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431622-432425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:430872-431046:-1:exon

LOC117990619
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase D1
translation: MEDEVTFLFQLGVLRDAASAPAHRLTLAHLKELAVKFVHDKIPDNGLNRLSDRILLFRHDYCSPNVLQLINSATDVTDETLVEIVLTANPLICDGAEQPAPRPHALAVHSYKAPTFCDFCGEMLFGLVRQGLKCEGCGLNYHKRCAVKVPSNCTTPTGATSLAGSRRASAAPRSPSRASATSHASQLSAPNDDSLVGTIASAKRSGGAWTSSLGIPHTFQVHTYTRPTVCRLCKKLLRGLFKQGLQCGDCHYNAHRKCLPFVPKDCGGEIRDHHGENQDSCSTSSEISEPRPPLDDDSDDADLDHDQRNHNHNHHDNHETSLRTTEEDEEPQRDVMPERAASRPSSSSSSPSANIPLMRIVQSVKHTKKRDGQWIKEGWLVHFTNKDKTIKRHYWRLDSKSITLFTSEQGTKYYKEIPLNEILAVDTARQPQADVMHCFELRTANVDYLVGVDPAWQGGATPLPPPDSGVGAYLARSWETTLRHALMPHTHSAEASPGSAGGGGASGSSGGGERVAEMAQLYQIHPDEVLGSGQFGIVYGGMHRATDRPVAIKVIDKLRFPTKQEAQLKNEVAILQNLSHPGVVNLERMFETPERIFVVMEKLKGDMLEMILSHEKGRLTERITKFIVAQILVALKHLHEKNIVHCDLKPENVLLSTDETFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIVYVSLSGTFPFNEDEDINEQIQNAAFMYPPAPWREISEEAIDLINNLLQVKQRKRLSVDKCLMHAWLQTREAWNDLRTLERRVGVRYLTHPSDDARLASPASPEAESTPH
SIO_010081: LOC117990619
subclass of: SO_0000673
so part of: LOC117990619
location: join(474097..474219,474940..475084,475177..475314,475973..476151,478748..478985,480599..480732,484573..484652,485627..485756,486945..487077,487427..487603,488062..488243,488924..489154,489937..490120,490313..490495,491399..491613)
location: region:474097-491613:1
so has part: feature:474097-474219:1:exon
so has part: feature:474940-475084:1:exon
so has part: feature:475177-475314:1:exon
so has part: feature:475973-476151:1:exon
so has part: feature:478748-478985:1:exon
so has part: feature:480599-480732:1:exon
so has part: feature:484573-484652:1:exon
so has part: feature:485627-485756:1:exon
so has part: feature:486945-487077:1:exon
so has part: feature:487427-487603:1:exon
so has part: feature:488062-488243:1:exon
so has part: feature:488924-489154:1:exon
so has part: feature:489937-490120:1:exon
so has part: feature:490313-490495:1:exon
so has part: feature:491399-491613:1:exon

XP_034833966.1
type: Protein
SIO_000068: ncbiprotein

position:474097:1
position: 474097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491613:1
position: 491613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474097-474219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474940-475084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475177-475314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475973-476151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478748-478985:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480599-480732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484573-484652:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485627-485756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:486945-487077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487427-487603:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:488062-488243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488924-489154:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:489937-490120:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:490313-490495:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:491399-491613:1:exon

LOC117990789
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 498520..501056
location: region:498520-501056:1
so has part: feature:498520-501056:1:exon
subclass of: SO_0000010

117990789
type: Gene
SIO_000068: ncbigene

position:498520:1
position: 498520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501056:1
position: 501056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498520-501056:1:exon

LOC117990789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990789
product: uncharacterized LOC117990789
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978281.1
SIO_010081: LOC117990789
subclass of: SO_0000673
so part of: LOC117990789
location: join(498520..499771,500213..500376,500958..501056)
location: region:498520-501056:1
so has part: feature:498520-499771:1:exon
so has part: feature:500213-500376:1:exon
so has part: feature:500958-501056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:498520-499771:1:exon

position:499771:1
position: 499771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500213-500376:1:exon

position:500213:1
position: 500213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500376:1
position: 500376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500958-501056:1:exon

position:500958:1
position: 500958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117990789
translation: MFILLLLLPQAGCEWVEISQNHYRKEPIHKVINFEHTTKTNTIYRNISVTEKQWHRGAVDKVSNVANIRRVQHPSVKTNSLKTRHEDKRYNNNFNDHTHTMEAEYDFITIKPNIQKFHKPNERDDVLDNQNKVTVVRTTTDNIRNVQRPNSKPIKKLPAAVASIDRRKHYDEKQNEEMNDVFNTNHRKQVQINKPVVEIDKLDFNDNDKFYTIEKPNFNRVSLVDEVNVDVPNYSENKYSNYSITNEPKAPKIKLIQKEENDHVKKTDVYKTAILIDEKMKHEPDDTKLYPLEGYFDSGNNFKNPTGSVDKNTEEIVKGPNPQKAVHNKDMEITPSMSDKETTFPNAQDFRSKDMLNVVKGNPVKGIWKLIKVVADTIYKNTHRSFKSKIKYLEGLKTTILTSIEDQIDSAWPDDARGAPSRHRRAAQARGHLEFPSSESTLMTISFLTFAVFLIKLVLQVIHTYKNKTMMVTPAVVAAVGRAAAAFRTHA
SIO_010081: LOC117990789
subclass of: SO_0000673
so part of: LOC117990789
location: join(498559..499771,500213..500376,500958..501056)
location: region:498559-501056:1
so has part: feature:498559-499771:1:exon
so has part: feature:500213-500376:1:exon
so has part: feature:500958-501056:1:exon

XP_034834172.1
type: Protein
SIO_000068: ncbiprotein

position:498559:1
position: 498559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498559-499771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:500213-500376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500958-501056:1:exon

LOC117990633
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990633
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 502158..506840
location: region:502158-506840:1
so has part: feature:502158-506840:1:exon
subclass of: SO_0000010

117990633
type: Gene
SIO_000068: ncbigene

position:502158:1
position: 502158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506840:1
position: 506840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502158-506840:1:exon

LOC117990633
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990633
product: zinc finger protein 41-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034978104.1
SIO_010081: LOC117990633
subclass of: SO_0000673
so part of: LOC117990633
location: join(502158..502323,502547..502674,503434..503562,504279..504334,505678..506840)
location: region:502158-506840:1
so has part: feature:502158-502323:1:exon
so has part: feature:502547-502674:1:exon
so has part: feature:503434-503562:1:exon
so has part: feature:504279-504334:1:exon
so has part: feature:505678-506840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502158-502323:1:exon

position:502323:1
position: 502323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:502547-502674:1:exon

position:502547:1
position: 502547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502674:1
position: 502674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:503434-503562:1:exon

position:503434:1
position: 503434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503562:1
position: 503562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:504279-504334:1:exon

position:504279:1
position: 504279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504334:1
position: 504334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:505678-506840:1:exon

position:505678:1
position: 505678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990633
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990633
product: zinc finger protein 41-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034978103.1
SIO_010081: LOC117990633
subclass of: SO_0000673
so part of: LOC117990633
location: join(502158..502323,502547..502674,503434..503562,504279..504334,504408..505754)
location: region:502158-505754:1
so has part: feature:502158-502323:1:exon
so has part: feature:502547-502674:1:exon
so has part: feature:503434-503562:1:exon
so has part: feature:504279-504334:1:exon
so has part: feature:504408-505754:1:exon

position:505754:1
position: 505754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502158-502323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502547-502674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503434-503562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504279-504334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504408-505754:1:exon

position:504408:1
position: 504408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990633
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990633
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 41-like isoform X2
translation: MFNMNFSETDSGQNYRNNENGSCLLFNNLLEHQELVDFTNVCRICASTADQSCPVFDEHGQHNDLAGKINKYLPIKVSQEDGLPQVICEQCRNTLLAWDELVQCCVQANVVLQQKLLDPDKPKQEEQARFTKSPIQTGTPRRVSFEAFLLEEENDDLSDHKYDTENTHAEIVSEDDDKPLAAIAKSKSNLYQDFYEALVNFRTHFVTEHDNQIACSDFSDSSDSEDANEKKMERDSEKVDLSSFDDLTDYNMRKDKMDEQTRTELNQVQTKINGKIYYTCKICGKHLSSTHTYIFHKRIHTGERPCVCHICGKQFRAPNGLKRHVTETHEKQRWYTCIVCFKNFANSQNLKQHMRIHTGERPFVCPHCGKRFTQSGSLHVHLKTHSDHYPHHCAECGAKFRLRSGLTRHRLKHTGLRPHVCVHCGKGFRQKHELNSHILAHTDSKPHACTFCGSAFRQRRALRHHCKRLHQNEVRDTTQIPNVYNHVGQYEG
SIO_010081: LOC117990633
subclass of: SO_0000673
so part of: LOC117990633
location: join(502224..502323,502547..502674,503434..503562,504279..504334,505678..506743)
location: region:502224-506743:1
so has part: feature:502224-502323:1:exon
so has part: feature:502547-502674:1:exon
so has part: feature:503434-503562:1:exon
so has part: feature:504279-504334:1:exon
so has part: feature:505678-506743:1:exon

XP_034833995.1
type: Protein
SIO_000068: ncbiprotein

position:502224:1
position: 502224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506743:1
position: 506743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502224-502323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502547-502674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503434-503562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504279-504334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505678-506743:1:exon

LOC117990633
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990633
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 660-like isoform X1
translation: MFNMNFSETDSGQNYRNNENGSCLLFNNLLEHQELVDFTNVCRICASTADQSCPVFDEHGQHNDLAGKINKYLPIKVSQEDGLPQVICEQCRNTLLAWDELVQCCVQANVVLQQKLLDPDKPKQEEQARFTKSPIQTGTPSWFYNTVREILTDYFKELNIEEENADLEYVCQMCTECSASKSVEELTGHLSSFHGCLLQNKLSVEDFVKDNITFEEALIMDKDDDDNESVQNETDSVIDTKEIKLQNYCCPLCENVFSSPSRLIYHLSKHIDISIADGIVCCGQLYDNKLDFAAHIQDEHVSKVLSENTCKSCGITANNLEELQTHINEEHPESNDLNERTEILHISNRQKYIPVACPKCNKIISNKYNLHLHIMHSHNQPTTFICEKCNKSYKSRGSLKYHHKIYHEGNLRYLCSFCGEAFPTRGTRNVHARIHTGAKPFECYKCGKCYRAKNTLNRHMEMHLDIRKYACNLCPKKFRKRTHLTYHLRTHEKKLNKINSK
SIO_010081: LOC117990633
subclass of: SO_0000673
so part of: LOC117990633
location: join(502224..502323,502547..502674,503434..503562,504279..504334,504408..505500)
location: region:502224-505500:1
so has part: feature:502224-502323:1:exon
so has part: feature:502547-502674:1:exon
so has part: feature:503434-503562:1:exon
so has part: feature:504279-504334:1:exon
so has part: feature:504408-505500:1:exon

XP_034833994.1
type: Protein
SIO_000068: ncbiprotein

position:505500:1
position: 505500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502224-502323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502547-502674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503434-503562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504279-504334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504408-505500:1:exon

LOC117990641
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(519577..523626)
location: region:519577-523626:-1
so has part: feature:519577-523626:-1:exon
subclass of: SO_0000010

117990641
type: Gene
SIO_000068: ncbigene

position:519577:-1
position: 519577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523626:-1
position: 523626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519577-523626:-1:exon

LOC117990641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990641
product: transmembrane protein 179
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034978113.1
SIO_010081: LOC117990641
subclass of: SO_0000673
so part of: LOC117990641
location: complement(join(519577..519799,520566..520650,521172..521333,522632..522775,523344..523626))
location: region:519577-523626:-1
so has part: feature:523344-523626:-1:exon
so has part: feature:522632-522775:-1:exon
so has part: feature:521172-521333:-1:exon
so has part: feature:520566-520650:-1:exon
so has part: feature:519577-519799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523344-523626:-1:exon

position:523344:-1
position: 523344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:522632-522775:-1:exon

position:522632:-1
position: 522632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522775:-1
position: 522775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:521172-521333:-1:exon

position:521172:-1
position: 521172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521333:-1
position: 521333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:520566-520650:-1:exon

position:520566:-1
position: 520566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520650:-1
position: 520650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:519577-519799:-1:exon

position:519799:-1
position: 519799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 179
translation: MALTNVLLLSQIAGYVIGLILSLCIIVPMGMHQDEFKGHCLLFSKGVWQEEDGQLLVSWASSSYCNYVIAVGVLMFLVCFLQIYRLSMFMYRGIDSSFLSAFIEAVGCAVLCALAVSAASMVTLGFMTWCQNIVERFPSCEDATGQDIDKKDKISTHGFYIELGTAQFGAWGAFATWVGLAVFAVLKVCRYHQLQNIQVSMYRERQRLVREGGSTPPLLAHPN
SIO_010081: LOC117990641
subclass of: SO_0000673
so part of: LOC117990641
location: complement(join(519629..519799,520566..520650,521172..521333,522632..522775,523344..523453))
location: region:519629-523453:-1
so has part: feature:523344-523453:-1:exon
so has part: feature:522632-522775:-1:exon
so has part: feature:521172-521333:-1:exon
so has part: feature:520566-520650:-1:exon
so has part: feature:519629-519799:-1:exon

XP_034834004.1
type: Protein
SIO_000068: ncbiprotein

position:519629:-1
position: 519629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523453:-1
position: 523453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523344-523453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:522632-522775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521172-521333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520566-520650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519629-519799:-1:exon

LOC117990636
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 523963..531758
location: region:523963-531758:1
so has part: feature:523963-531758:1:exon
subclass of: SO_0000010

117990636
type: Gene
SIO_000068: ncbigene

position:523963:1
position: 523963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531758:1
position: 531758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523963-531758:1:exon

LOC117990636
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990636
product: protein YIF1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_034978106.1
SIO_010081: LOC117990636
subclass of: SO_0000673
so part of: LOC117990636
location: join(523963..524110,526141..526332,527701..527786,528619..528786,529549..529672,530058..530320,531441..531758)
location: region:523963-531758:1
so has part: feature:523963-524110:1:exon
so has part: feature:526141-526332:1:exon
so has part: feature:527701-527786:1:exon
so has part: feature:528619-528786:1:exon
so has part: feature:529549-529672:1:exon
so has part: feature:530058-530320:1:exon
so has part: feature:531441-531758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523963-524110:1:exon

position:524110:1
position: 524110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:526141-526332:1:exon

position:526141:1
position: 526141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526332:1
position: 526332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:527701-527786:1:exon

position:527701:1
position: 527701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527786:1
position: 527786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:528619-528786:1:exon

position:528619:1
position: 528619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528786:1
position: 528786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529549-529672:1:exon

position:529549:1
position: 529549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529672:1
position: 529672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:530058-530320:1:exon

position:530058:1
position: 530058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530320:1
position: 530320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:531441-531758:1:exon

position:531441:1
position: 531441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990636
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIF1B
translation: MNFNASRNVGAGGPRKPKRVSDVTAMGTPSPAPSFSPAAAYNPAFTQGPPPPYSQGIQLDGAQNFAAPDPAGNFGYMGGFSQSPMASPANIGSMLQQPIVQDMAMQYGNQLAAQGREVVKRELDKFVPVSRLRYYFAVDTKYVLSKLLLILFPYRHKEWMVKYDQENPVAPRYDVNAPDLYIPSMGYVTYVLLAGFMLGLQHRFSPEQISIQASSALAYIIFEMVLYLVTLYITNTTTALKTLDLLAFSGYKYTVMIFSLLGALTLGPMGYYCCLVVCSFGLSYFLVKTLRLQLLSGATQAPEQPSYGGYAAPNPYAESWTKSSNSGTKRRVYFLLFVAITQPLLSWWLTYHLVPSSAVLPVTSAR
SIO_010081: LOC117990636
subclass of: SO_0000673
so part of: LOC117990636
location: join(524086..524110,526141..526332,527701..527786,528619..528786,529549..529672,530058..530320,531441..531683)
location: region:524086-531683:1
so has part: feature:524086-524110:1:exon
so has part: feature:526141-526332:1:exon
so has part: feature:527701-527786:1:exon
so has part: feature:528619-528786:1:exon
so has part: feature:529549-529672:1:exon
so has part: feature:530058-530320:1:exon
so has part: feature:531441-531683:1:exon

XP_034833997.1
type: Protein
SIO_000068: ncbiprotein

position:524086:1
position: 524086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531683:1
position: 531683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524086-524110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526141-526332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527701-527786:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528619-528786:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529549-529672:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530058-530320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531441-531683:1:exon

LOC117990631
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 536086..631885
location: region:536086-631885:1
so has part: feature:536086-631885:1:exon
subclass of: SO_0000010

117990631
type: Gene
SIO_000068: ncbigene

position:536086:1
position: 536086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631885:1
position: 631885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536086-631885:1:exon

LOC117990631
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990631
product: RNA-binding protein Nova-2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978094.1
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536086..536497,536903..536965,594051..594197,607596..607750,617035..617188,620855..621024,625075..625257,626304..626499,630871..631095,631627..631885)
location: region:536086-631885:1
so has part: feature:536086-536497:1:exon
so has part: feature:536903-536965:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621024:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630871-631095:1:exon
so has part: feature:631627-631885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536086-536497:1:exon

position:536497:1
position: 536497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:536903-536965:1:exon

position:536903:1
position: 536903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536965:1
position: 536965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:594051-594197:1:exon

position:594051:1
position: 594051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594197:1
position: 594197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:607596-607750:1:exon

position:607596:1
position: 607596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607750:1
position: 607750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:617035-617188:1:exon

position:617035:1
position: 617035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617188:1
position: 617188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:620855-621024:1:exon

position:620855:1
position: 620855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621024:1
position: 621024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:625075-625257:1:exon

position:625075:1
position: 625075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625257:1
position: 625257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:626304-626499:1:exon

position:626304:1
position: 626304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626499:1
position: 626499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:630871-631095:1:exon

position:630871:1
position: 630871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631095:1
position: 631095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:631627-631885:1:exon

position:631627:1
position: 631627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990631
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990631
product: RNA-binding protein Nova-2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978097.1
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536086..536497,536903..536965,594051..594197,607596..607750,617035..617188,620855..621024,625075..625257,626304..626499,630943..631095,631627..631885)
location: region:536086-631885:1
so has part: feature:536086-536497:1:exon
so has part: feature:536903-536965:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621024:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630943-631095:1:exon
so has part: feature:631627-631885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536086-536497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536903-536965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620855-621024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626304-626499:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630943-631095:1:exon

position:630943:1
position: 630943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:631627-631885:1:exon

LOC117990631
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990631
product: RNA-binding protein Nova-2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978095.1
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536086..536497,536903..536965,594051..594197,607596..607750,617035..617188,620855..621015,625075..625257,626304..626499,630871..631095,631627..631885)
location: region:536086-631885:1
so has part: feature:536086-536497:1:exon
so has part: feature:536903-536965:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621015:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630871-631095:1:exon
so has part: feature:631627-631885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536086-536497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536903-536965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620855-621015:1:exon

position:621015:1
position: 621015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626304-626499:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630871-631095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:631627-631885:1:exon

LOC117990631
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990631
product: RNA-binding protein Nova-2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978098.1
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536086..536497,594051..594197,607596..607750,617035..617188,620855..621015,625075..625257,626304..626499,630871..631095,631627..631885)
location: region:536086-631885:1
so has part: feature:536086-536497:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621015:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630871-631095:1:exon
so has part: feature:631627-631885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536086-536497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620855-621015:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:626304-626499:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:630871-631095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:631627-631885:1:exon

LOC117990631
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990631
product: RNA-binding protein Nova-2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978100.1
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536086..536497,536903..536965,594051..594197,607596..607750,617035..617188,620855..621024,625075..625257,626304..626641,627834..627872)
location: region:536086-627872:1
so has part: feature:536086-536497:1:exon
so has part: feature:536903-536965:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621024:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626641:1:exon
so has part: feature:627834-627872:1:exon

position:627872:1
position: 627872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536086-536497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536903-536965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620855-621024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626304-626641:1:exon

position:626641:1
position: 626641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:627834-627872:1:exon

position:627834:1
position: 627834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990631
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein Nova-1 isoform X1
translation: MAADTGMDTCPSPEITDSRKRPLDGDSENGDVKRSHFSSVQDLVTALPLANGHGNITSHFAVEPTYHFKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIGKGGNYIKLIKEQSGSYVQISQKAKELSLQERCITVVGEKENNKKACVMILQKVVDDPQSGSCPNVSYADVAGPVANYNPTGSPYAVPATEVTESHALVGGGSVGGVGGVGGVGGVGGVLMNGSGLGALSLSLSLAPPGTPPQSPLTQHTLDHIKVALRQAGYSEGGISEIGAALSLLVKHGVLGLALPTALPAPLSAAYFPLPAQDSSAVFGPLAQVQLGGARGGACGLERFAEVAFEALRPPAVAPISLSGGAVPAFPSASLLPLSKSPTPADAGAKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQEEELKRTRHNALTGLMQ
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536380..536497,536903..536965,594051..594197,607596..607750,617035..617188,620855..621024,625075..625257,626304..626499,630871..631095,631627..631847)
location: region:536380-631847:1
so has part: feature:536380-536497:1:exon
so has part: feature:536903-536965:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621024:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630871-631095:1:exon
so has part: feature:631627-631847:1:exon

XP_034833985.1
type: Protein
SIO_000068: ncbiprotein

position:536380:1
position: 536380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631847:1
position: 631847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536380-536497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536903-536965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620855-621024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626304-626499:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630871-631095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:631627-631847:1:exon

LOC117990631
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein Nova-1 isoform X3
translation: MAADTGMDTCPSPEITDSRKRPLDGDSENGDVKRSHFSSVQDLVTALPLANGHGNITSHFAVEPTYHFKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIGKGGNYIKLIKEQSGSYVQISQKAKELSLQERCITVVGEKENNKKACVMILQKVVDDPQSGSCPNVSYADVAGPVANYNPTGSPYAVPATEVTESHALVGGGSVGGVGGVGGVGGVGGVLMNGSGLGALSLSLSLAPPGTPPQSPLTQHTLDHIKVALRQAGYSEGGISEIGAALSLLVKHGVLGLALPTALPAPLSAAYFPLPAQDSSAVFGPLAQVQLAVAPISLSGGAVPAFPSASLLPLSKSPTPADAGAKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQEEELKRTRHNALTGLMQ
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536380..536497,536903..536965,594051..594197,607596..607750,617035..617188,620855..621024,625075..625257,626304..626499,630943..631095,631627..631847)
location: region:536380-631847:1
so has part: feature:536380-536497:1:exon
so has part: feature:536903-536965:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621024:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630943-631095:1:exon
so has part: feature:631627-631847:1:exon

XP_034833988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536380-536497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536903-536965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620855-621024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626304-626499:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630943-631095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:631627-631847:1:exon

LOC117990631
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein Nova-1 isoform X2
translation: MAADTGMDTCPSPEITDSRKRPLDGDSENGDVKRSHFSSVQDLVTALPLANGHGNITSHFAVEPTYHFKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIGKGGNYIKLIKEQSGSYVQISQKAKELSLQERCITVVGEKENNKKACVMILQKVVDDPQSGSCPNVSYADVAGPVANYNPTGSPYAVPATESHALVGGGSVGGVGGVGGVGGVGGVLMNGSGLGALSLSLSLAPPGTPPQSPLTQHTLDHIKVALRQAGYSEGGISEIGAALSLLVKHGVLGLALPTALPAPLSAAYFPLPAQDSSAVFGPLAQVQLGGARGGACGLERFAEVAFEALRPPAVAPISLSGGAVPAFPSASLLPLSKSPTPADAGAKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQEEELKRTRHNALTGLMQ
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536380..536497,536903..536965,594051..594197,607596..607750,617035..617188,620855..621015,625075..625257,626304..626499,630871..631095,631627..631847)
location: region:536380-631847:1
so has part: feature:536380-536497:1:exon
so has part: feature:536903-536965:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621015:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630871-631095:1:exon
so has part: feature:631627-631847:1:exon

XP_034833986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536380-536497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536903-536965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620855-621015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626304-626499:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630871-631095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:631627-631847:1:exon

LOC117990631
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein Nova-1 isoform X4
translation: MAADTGMDTCPSPEITDSRKRPLDGDSENGDVKRSHFSSAVEPTYHFKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIGKGGNYIKLIKEQSGSYVQISQKAKELSLQERCITVVGEKENNKKACVMILQKVVDDPQSGSCPNVSYADVAGPVANYNPTGSPYAVPATESHALVGGGSVGGVGGVGGVGGVGGVLMNGSGLGALSLSLSLAPPGTPPQSPLTQHTLDHIKVALRQAGYSEGGISEIGAALSLLVKHGVLGLALPTALPAPLSAAYFPLPAQDSSAVFGPLAQVQLGGARGGACGLERFAEVAFEALRPPAVAPISLSGGAVPAFPSASLLPLSKSPTPADAGAKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQEEELKRTRHNALTGLMQ
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536380..536497,594051..594197,607596..607750,617035..617188,620855..621015,625075..625257,626304..626499,630871..631095,631627..631847)
location: region:536380-631847:1
so has part: feature:536380-536497:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621015:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630871-631095:1:exon
so has part: feature:631627-631847:1:exon

XP_034833989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536380-536497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620855-621015:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:626304-626499:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:630871-631095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:631627-631847:1:exon

LOC117990631
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein Nova-1 isoform X6
translation: MAADTGMDTCPSPEITDSRKRPLDGDSENGDVKRSHFSSVQDLVTALPLANGHGNITSHFAVEPTYHFKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIGKGGNYIKLIKEQSGSYVQISQKAKELSLQERCITVVGEKENNKKACVMILQKVVDDPQSGSCPNVSYADVAGPVANYNPTGSPYAVPATEVTESHALVGGGSVGGVGGVGGVGGVGGVLMNGSGLGALSLSLSLAPPGTPPQSPLTQHTLDHIKVALRQAGYSEGGISEIGAALSLLVKHGVLGLALPTALPAPLSAAYFPLPAQDSSAVFGPLAQVQLGEDSRTHALRGYYMSPHDNTQTPPGYYMELDNHIQRFAHRLLQYS
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536380..536497,536903..536965,594051..594197,607596..607750,617035..617188,620855..621024,625075..625257,626304..626636)
location: region:536380-626636:1
so has part: feature:536380-536497:1:exon
so has part: feature:536903-536965:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621024:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626636:1:exon

XP_034833991.1
type: Protein
SIO_000068: ncbiprotein

position:626636:1
position: 626636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536380-536497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536903-536965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620855-621024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626304-626636:1:exon

LOC117990631
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990631
product: RNA-binding protein Nova-2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034978099.1
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(536941..536965,578803..578886,594051..594197,607596..607750,617035..617188,620855..621015,625075..625257,626304..626499,630871..631095,631627..631885)
location: region:536941-631885:1
so has part: feature:536941-536965:1:exon
so has part: feature:578803-578886:1:exon
so has part: feature:594051-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621015:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630871-631095:1:exon
so has part: feature:631627-631885:1:exon

position:536941:1
position: 536941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536941-536965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578803-578886:1:exon

position:578803:1
position: 578803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578886:1
position: 578886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:594051-594197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620855-621015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626304-626499:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630871-631095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:631627-631885:1:exon

LOC117990631
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein Nova-2 isoform X5
translation: MVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIGKGGNYIKLIKEQSGSYVQISQKAKELSLQERCITVVGEKENNKKACVMILQKVVDDPQSGSCPNVSYADVAGPVANYNPTGSPYAVPATESHALVGGGSVGGVGGVGGVGGVGGVLMNGSGLGALSLSLSLAPPGTPPQSPLTQHTLDHIKVALRQAGYSEGGISEIGAALSLLVKHGVLGLALPTALPAPLSAAYFPLPAQDSSAVFGPLAQVQLGGARGGACGLERFAEVAFEALRPPAVAPISLSGGAVPAFPSASLLPLSKSPTPADAGAKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQEEELKRTRHNALTGLMQ
SIO_010081: LOC117990631
subclass of: SO_0000673
so part of: LOC117990631
location: join(594092..594197,607596..607750,617035..617188,620855..621015,625075..625257,626304..626499,630871..631095,631627..631847)
location: region:594092-631847:1
so has part: feature:594092-594197:1:exon
so has part: feature:607596-607750:1:exon
so has part: feature:617035-617188:1:exon
so has part: feature:620855-621015:1:exon
so has part: feature:625075-625257:1:exon
so has part: feature:626304-626499:1:exon
so has part: feature:630871-631095:1:exon
so has part: feature:631627-631847:1:exon

XP_034833990.1
type: Protein
SIO_000068: ncbiprotein

position:594092:1
position: 594092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594092-594197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:607596-607750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617035-617188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620855-621015:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625075-625257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:626304-626499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630871-631095:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631627-631847:1:exon

LOC117990624
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(642008..644509)
location: region:642008-644509:-1
so has part: feature:642008-644509:-1:exon
subclass of: SO_0000010

117990624
type: Gene
SIO_000068: ncbigene

position:642008:-1
position: 642008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644509:-1
position: 644509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642008-644509:-1:exon

LOC117990624
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990624
product: putative tyrosine-protein kinase Wsck
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978085.1
SIO_010081: LOC117990624
subclass of: SO_0000673
so part of: LOC117990624
location: complement(642008..644509)
location: region:642008-644509:-1
so has part: feature:642008-644509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642008-644509:-1:exon

LOC117990624
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative tyrosine-protein kinase Wsck
translation: MEPPCPLLVAVIFLYINYASTDRGDYIGCYRFKEDVLNTHTGQSVDVCLSACEQVYYKYALIGNESTCFCGNEPGQFKLELDSCDTPCPKNETQKCGGDNAASVYDTEVTAPGPPMSIQVLNITETTVRLRWTPPQAFTRITGYVIKASVVETYATAALLPVAWAVPNTTLQSELPNLQPGSVYNISVAATNYKEEGASIGTVVETIIGTPDPSPPNIEMRERHGDEMLVHIPEAKNVNGPVSMYRIVVSIELYQQGIIIENLGNHSYADEQGLPYYITAELDPDDIKNDFIIGNGRTYNGYYNAPLPLTNDIEVSLGVVSEKNHVKKVRYAESTKKIILNINEIEEYSPMVVALGAGIAIGVVLLLIGVGALIVLRKKIHMVRMQRCSQSMPLSLSEPCMEIENSGFLQEQDERVDYYGNLKRKLWNIPRDLIEIDISCVVGLGSYGKFTRGKVQQHGAQTPGLVQVISDRDLEKPDKKLMLQELDLLIKSNEHENLIAFIGICETSTTLFVVLQDTKITLKELLLQSRHRDLQNNKFCLLSESKAVQVCVDVASGMEYLHTKKIMHKRLSCRNIVIGDNGVAKVAGFGLSHIRPLHETPDYTRWTSHEMLRQSRFNFKADVWSYGVLVWEALTIGATPYAHTGNKDVAARVLRGMRPSQPSYVADGLFQLCLQCWQVDPDERPPFSSLLNELTHFAEGPGSSCLSFTHYNGFSYEPHVPQYEIVT
SIO_010081: LOC117990624
subclass of: SO_0000673
so part of: LOC117990624
location: complement(642142..644325)
location: region:642142-644325:-1
so has part: feature:642142-644325:-1:exon

XP_034833976.1
type: Protein
SIO_000068: ncbiprotein

position:642142:-1
position: 642142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644325:-1
position: 644325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642142-644325:-1:exon

LOC117990790
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 645469..681746
location: region:645469-681746:1
so has part: feature:645469-681746:1:exon
subclass of: SO_0000010

117990790
type: Gene
SIO_000068: ncbigene

position:645469:1
position: 645469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681746:1
position: 681746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645469-681746:1:exon

LOC117990790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990790
product: integrator complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978282.1
SIO_010081: LOC117990790
subclass of: SO_0000673
so part of: LOC117990790
location: join(645469..645694,646281..646453,647165..647434,648131..648266,648832..648925,650090..650225,650463..650668,651270..651432,651721..651867,652185..652382,652674..652820,653142..653314,654173..654325,654827..654974,655188..655393,655880..656102,656736..656806,657749..657920,658363..658515,659152..659332,659770..660004,661942..662108,667357..667532,668248..668406,668866..669010,670800..670933,671240..671365,672451..672569,673863..673995,674863..675060,676239..676426,677446..677631,678533..678697,679079..679208,680396..680567,681524..681746)
location: region:645469-681746:1
so has part: feature:645469-645694:1:exon
so has part: feature:646281-646453:1:exon
so has part: feature:647165-647434:1:exon
so has part: feature:648131-648266:1:exon
so has part: feature:648832-648925:1:exon
so has part: feature:650090-650225:1:exon
so has part: feature:650463-650668:1:exon
so has part: feature:651270-651432:1:exon
so has part: feature:651721-651867:1:exon
so has part: feature:652185-652382:1:exon
so has part: feature:652674-652820:1:exon
so has part: feature:653142-653314:1:exon
so has part: feature:654173-654325:1:exon
so has part: feature:654827-654974:1:exon
so has part: feature:655188-655393:1:exon
so has part: feature:655880-656102:1:exon
so has part: feature:656736-656806:1:exon
so has part: feature:657749-657920:1:exon
so has part: feature:658363-658515:1:exon
so has part: feature:659152-659332:1:exon
so has part: feature:659770-660004:1:exon
so has part: feature:661942-662108:1:exon
so has part: feature:667357-667532:1:exon
so has part: feature:668248-668406:1:exon
so has part: feature:668866-669010:1:exon
so has part: feature:670800-670933:1:exon
so has part: feature:671240-671365:1:exon
so has part: feature:672451-672569:1:exon
so has part: feature:673863-673995:1:exon
so has part: feature:674863-675060:1:exon
so has part: feature:676239-676426:1:exon
so has part: feature:677446-677631:1:exon
so has part: feature:678533-678697:1:exon
so has part: feature:679079-679208:1:exon
so has part: feature:680396-680567:1:exon
so has part: feature:681524-681746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:645469-645694:1:exon

position:645694:1
position: 645694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646281-646453:1:exon

position:646281:1
position: 646281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646453:1
position: 646453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:647165-647434:1:exon

position:647165:1
position: 647165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647434:1
position: 647434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:648131-648266:1:exon

position:648131:1
position: 648131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648266:1
position: 648266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:648832-648925:1:exon

position:648832:1
position: 648832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648925:1
position: 648925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:650090-650225:1:exon

position:650090:1
position: 650090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650225:1
position: 650225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:650463-650668:1:exon

position:650463:1
position: 650463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650668:1
position: 650668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:651270-651432:1:exon

position:651270:1
position: 651270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651432:1
position: 651432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:651721-651867:1:exon

position:651721:1
position: 651721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651867:1
position: 651867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:652185-652382:1:exon

position:652185:1
position: 652185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652382:1
position: 652382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:652674-652820:1:exon

position:652674:1
position: 652674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652820:1
position: 652820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:653142-653314:1:exon

position:653142:1
position: 653142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653314:1
position: 653314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:654173-654325:1:exon

position:654173:1
position: 654173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654325:1
position: 654325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:654827-654974:1:exon

position:654827:1
position: 654827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654974:1
position: 654974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:655188-655393:1:exon

position:655188:1
position: 655188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655393:1
position: 655393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:655880-656102:1:exon

position:655880:1
position: 655880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656102:1
position: 656102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:656736-656806:1:exon

position:656736:1
position: 656736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656806:1
position: 656806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:657749-657920:1:exon

position:657749:1
position: 657749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657920:1
position: 657920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:658363-658515:1:exon

position:658363:1
position: 658363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658515:1
position: 658515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:659152-659332:1:exon

position:659152:1
position: 659152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659332:1
position: 659332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:659770-660004:1:exon

position:659770:1
position: 659770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660004:1
position: 660004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:661942-662108:1:exon

position:661942:1
position: 661942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662108:1
position: 662108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:667357-667532:1:exon

position:667357:1
position: 667357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667532:1
position: 667532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:668248-668406:1:exon

position:668248:1
position: 668248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668406:1
position: 668406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:668866-669010:1:exon

position:668866:1
position: 668866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669010:1
position: 669010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:670800-670933:1:exon

position:670800:1
position: 670800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670933:1
position: 670933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:671240-671365:1:exon

position:671240:1
position: 671240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671365:1
position: 671365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:672451-672569:1:exon

position:672451:1
position: 672451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672569:1
position: 672569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:673863-673995:1:exon

position:673863:1
position: 673863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673995:1
position: 673995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:674863-675060:1:exon

position:674863:1
position: 674863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675060:1
position: 675060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:676239-676426:1:exon

position:676239:1
position: 676239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676426:1
position: 676426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:677446-677631:1:exon

position:677446:1
position: 677446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677631:1
position: 677631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:678533-678697:1:exon

position:678533:1
position: 678533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678697:1
position: 678697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:679079-679208:1:exon

position:679079:1
position: 679079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679208:1
position: 679208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:680396-680567:1:exon

position:680396:1
position: 680396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680567:1
position: 680567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:681524-681746:1:exon

position:681524:1
position: 681524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 1
translation: MERGKMSSTGRGGKSKAPQHPQDIFALGSKSTVVVSRDSEKRNIHKPSTSGVGERKREPAGFGSAPPSKRARIGSPAEAVTGTSLEVDPVDLVPNVLQALDTHNSDKLLGLLTGSIRLLKSQRSKPDPILCMSMLYLTKIRPNMFAHETVTQTLCTLLKREQGAAFKSKGNPLVFVLACNMLYAGHRDSNNWPDTFIKVYIEDALNERWWVECAWCKCLVDNIVTAFATKQPPAHLIPSDNTLGTMSPSGSGSPLMGSTEEDVDNTELEYSVFPRYSSSYESVEALVLEAIREQIQRRAAPDAIGKGFLKLLSATCGFPEIRMIAASRLEAWLHSGKLWRAAQELLAHVCANAAASGPSAARDHEVLAQLARMRLKTKPLQAAYQSCLREMVSESPALLRSVVTHTIYNELSNVRSPNNMAVLAALINAQPQLVPAAMADTYQELMVRTEDYLRPLRALTRECVRAARSDAAALLPLACALAHPPPMDPPQEIRERAFQSIADLFCVCCLVTAAHSKHSADYRAQLTALQQQALGWLRDTAATVYRPARHDYLHVLHKIMFVEPAETYSKVDNWPPESERALTYRLCTETPLPQNTLLRLIFIGLSKEIPVSPTEVFELIEQLVRRACALPPEDQPLTVDKLEIADYIFQLCQFHPPDNITLPASYTAPALAITSLYWRGWMLLTMLAAHNPQGFAERAAAAYPTLRALIECCITSKPSIEWNGTAEGERAEAERAVVLQLETHLAAASNAKLPVTEHSSRLLAQLTTLEPLGPARRPPAGVLEALQTLSSQLRLGRLLCRQPALLLQLVERHGTRRAMPWLHQLLRHDRLELSVLPVQCLCEFLSAGGAGGAGGAGGAGSGEAGKAGELCAHLRRTLHSEEGARAVLHYYLQRLAHTHKHTRQSANRGLKLVLSQTDDATDMDYNADVSPESWLPLLPSLVHWEALRGEAVRRVRAACLVECVPQHVAAYLGFLACHAEPHDLTDIVLDLSQVLMERTTVMGYVLPPVDAKEVPRDDQYLGQHKALHSLTTIFYTHLKQMLSSTEPTEAQEMLEEGAEGASGLYAGDKVTLQWANGRRATLYVVVAHAHLKLLCYGPSCLDTNQEMYSWLQSTWVGSDAPEAFVSESPDEAVLLPDWLRLSLVRSARKPLVEAGLRGLPANKLSLFIQTFGMPVSSMSALLETLDACPVGAINRLGVERGYMAQLLLVQRARGAVGGHAFAAALRLSRPQYPPDDTLFTEEVLPEEEEDPWASPREPVRLDAGSVGALLATTFSAADMFRGDLDAAFRQLHGLISDEARGGEGPCTRATLAFLLTANVAGLLRQPAYAAPLLRALTHARPKGFTEVAKGLLSQCKCARGPVADALRSAAGAAVLSDSPLPTVPAHATKDQLVAAFESTTPSTLEVVGNKIIESQDTQVVIDTITQLLDKNQKNCYEITVKVEEDEKYTSMPAHVLSVRGLGCGLLLDWLSELQRETRDNQMRLMFVRDGGSWRPLLVTLLAHRASWRTLHGCLAALLQPGGWSATAVLDFAETLIGSPRVWQGRDRATPKHHTPEDSLRLTHTQLDVLIQYVAEEASEAEAAEGMEAARRSIEARLPLILRCCSAPHALLAAALAASKAHPLLLLLLYMKVPKILQLLRECEDRPPATCHDIAPVDMMSAARRSTSATDRVSHSLLSTLAAAPPHHSKEHSQKMWRTEANVRAVWARCRGAGERALPLTGALLRGVRGRTHHHHQHLLSALEILPDKELFANHVSDEIHNILECFLNMVKEGGAGSGSLAHRVAALLRRYRAARPSRATALLAAHRDTVSSQAALSGLMTAEGPPASVAPPPHALHALQRRVAPPPELHWLVQEVEAWGVRRGGAWGGARAADALLRAVAPLAASPHAPLRTCALSLLAKLLPAAPDLHPGLQAILECLESNQPEVAQSVIDKLPELVVGMQEHAARILMRVFELGMKSRLPVEQCIAKCVATINLNRGC
SIO_010081: LOC117990790
subclass of: SO_0000673
so part of: LOC117990790
location: join(645544..645694,646281..646453,647165..647434,648131..648266,648832..648925,650090..650225,650463..650668,651270..651432,651721..651867,652185..652382,652674..652820,653142..653314,654173..654325,654827..654974,655188..655393,655880..656102,656736..656806,657749..657920,658363..658515,659152..659332,659770..660004,661942..662108,667357..667532,668248..668406,668866..669010,670800..670933,671240..671365,672451..672569,673863..673995,674863..675060,676239..676426,677446..677631,678533..678697,679079..679208,680396..680567,681524..681735)
location: region:645544-681735:1
so has part: feature:645544-645694:1:exon
so has part: feature:646281-646453:1:exon
so has part: feature:647165-647434:1:exon
so has part: feature:648131-648266:1:exon
so has part: feature:648832-648925:1:exon
so has part: feature:650090-650225:1:exon
so has part: feature:650463-650668:1:exon
so has part: feature:651270-651432:1:exon
so has part: feature:651721-651867:1:exon
so has part: feature:652185-652382:1:exon
so has part: feature:652674-652820:1:exon
so has part: feature:653142-653314:1:exon
so has part: feature:654173-654325:1:exon
so has part: feature:654827-654974:1:exon
so has part: feature:655188-655393:1:exon
so has part: feature:655880-656102:1:exon
so has part: feature:656736-656806:1:exon
so has part: feature:657749-657920:1:exon
so has part: feature:658363-658515:1:exon
so has part: feature:659152-659332:1:exon
so has part: feature:659770-660004:1:exon
so has part: feature:661942-662108:1:exon
so has part: feature:667357-667532:1:exon
so has part: feature:668248-668406:1:exon
so has part: feature:668866-669010:1:exon
so has part: feature:670800-670933:1:exon
so has part: feature:671240-671365:1:exon
so has part: feature:672451-672569:1:exon
so has part: feature:673863-673995:1:exon
so has part: feature:674863-675060:1:exon
so has part: feature:676239-676426:1:exon
so has part: feature:677446-677631:1:exon
so has part: feature:678533-678697:1:exon
so has part: feature:679079-679208:1:exon
so has part: feature:680396-680567:1:exon
so has part: feature:681524-681735:1:exon

XP_034834173.1
type: Protein
SIO_000068: ncbiprotein

position:645544:1
position: 645544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681735:1
position: 681735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645544-645694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646281-646453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647165-647434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648131-648266:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648832-648925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:650090-650225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:650463-650668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651270-651432:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:651721-651867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:652185-652382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:652674-652820:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:653142-653314:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:654173-654325:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:654827-654974:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:655188-655393:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:655880-656102:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:656736-656806:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:657749-657920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:658363-658515:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:659152-659332:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:659770-660004:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:661942-662108:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:667357-667532:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:668248-668406:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:668866-669010:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:670800-670933:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:671240-671365:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:672451-672569:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:673863-673995:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:674863-675060:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:676239-676426:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:677446-677631:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:678533-678697:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:679079-679208:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:680396-680567:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:681524-681735:1:exon

LOC117990640
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(683147..686396)
location: region:683147-686396:-1
so has part: feature:683147-686396:-1:exon
subclass of: SO_0000010

117990640
type: Gene
SIO_000068: ncbigene

position:683147:-1
position: 683147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686396:-1
position: 686396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683147-686396:-1:exon

LOC117990640
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990640
product: viral IAP-associated factor homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_034978112.1
SIO_010081: LOC117990640
subclass of: SO_0000673
so part of: LOC117990640
location: complement(join(683147..683258,683428..683566,684565..684773,685356..685584,686092..686224,686304..686396))
location: region:683147-686396:-1
so has part: feature:686304-686396:-1:exon
so has part: feature:686092-686224:-1:exon
so has part: feature:685356-685584:-1:exon
so has part: feature:684565-684773:-1:exon
so has part: feature:683428-683566:-1:exon
so has part: feature:683147-683258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686304-686396:-1:exon

position:686304:-1
position: 686304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686092-686224:-1:exon

position:686092:-1
position: 686092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686224:-1
position: 686224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685356-685584:-1:exon

position:685356:-1
position: 685356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685584:-1
position: 685584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:684565-684773:-1:exon

position:684565:-1
position: 684565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684773:-1
position: 684773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:683428-683566:-1:exon

position:683428:-1
position: 683428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683566:-1
position: 683566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:683147-683258:-1:exon

position:683258:-1
position: 683258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: viral IAP-associated factor homolog
translation: MQNPNEDTEWNDVLRSKGILPPKEKEISEDEIVNMIEQTIQKKQEEKDKQLSELDLDGLDELEDSEDEAVIEEYRRKRIAELKRLSEKPRFGDVREVSGQDYVQEVNKAGEGIWVVIHLYKQGIQQCALINQHMAQLAAKFPYTKFIKAIAQTCIPNFPERNLPSLFVYFEGDMKKQLVGPHELRGTALTCDELEYILGQVGAVDTKITEDPKPKIKDKLFTDLGSNDW
SIO_010081: LOC117990640
subclass of: SO_0000673
so part of: LOC117990640
location: complement(join(683454..683566,684565..684773,685356..685584,686092..686224,686304..686309))
location: region:683454-686309:-1
so has part: feature:686304-686309:-1:exon
so has part: feature:686092-686224:-1:exon
so has part: feature:685356-685584:-1:exon
so has part: feature:684565-684773:-1:exon
so has part: feature:683454-683566:-1:exon

XP_034834003.1
type: Protein
SIO_000068: ncbiprotein

position:683454:-1
position: 683454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686309:-1
position: 686309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686304-686309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686092-686224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685356-685584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684565-684773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683454-683566:-1:exon

LOC117990627
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 686924..711164
location: region:686924-711164:1
so has part: feature:686924-711164:1:exon
subclass of: SO_0000010

117990627
type: Gene
SIO_000068: ncbigene

position:686924:1
position: 686924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711164:1
position: 711164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686924-711164:1:exon

LOC117990627
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990627
product: atlastin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034978088.1
SIO_010081: LOC117990627
subclass of: SO_0000673
so part of: LOC117990627
location: join(686924..687054,698579..698632,703565..703788,704332..704481,705079..705234,705537..705686,706649..706787,707331..707515,708023..708244,709106..709320,709653..709719,709944..711164)
location: region:686924-711164:1
so has part: feature:686924-687054:1:exon
so has part: feature:698579-698632:1:exon
so has part: feature:703565-703788:1:exon
so has part: feature:704332-704481:1:exon
so has part: feature:705079-705234:1:exon
so has part: feature:705537-705686:1:exon
so has part: feature:706649-706787:1:exon
so has part: feature:707331-707515:1:exon
so has part: feature:708023-708244:1:exon
so has part: feature:709106-709320:1:exon
so has part: feature:709653-709719:1:exon
so has part: feature:709944-711164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686924-687054:1:exon

position:687054:1
position: 687054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698579-698632:1:exon

position:698579:1
position: 698579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698632:1
position: 698632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:703565-703788:1:exon

position:703565:1
position: 703565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703788:1
position: 703788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:704332-704481:1:exon

position:704332:1
position: 704332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704481:1
position: 704481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:705079-705234:1:exon

position:705079:1
position: 705079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705234:1
position: 705234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:705537-705686:1:exon

position:705537:1
position: 705537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705686:1
position: 705686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:706649-706787:1:exon

position:706649:1
position: 706649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706787:1
position: 706787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:707331-707515:1:exon

position:707331:1
position: 707331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707515:1
position: 707515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:708023-708244:1:exon

position:708023:1
position: 708023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708244:1
position: 708244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:709106-709320:1:exon

position:709106:1
position: 709106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709320:1
position: 709320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:709653-709719:1:exon

position:709653:1
position: 709653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709719:1
position: 709719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:709944-711164:1:exon

position:709944:1
position: 709944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990627
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990627
product: atlastin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_034978090.1
SIO_010081: LOC117990627
subclass of: SO_0000673
so part of: LOC117990627
location: join(686924..687054,703565..703788,704332..704481,705079..705234,705537..705686,706649..706787,707331..707515,708023..708244,709106..709320,709653..709719,709944..711164)
location: region:686924-711164:1
so has part: feature:686924-687054:1:exon
so has part: feature:703565-703788:1:exon
so has part: feature:704332-704481:1:exon
so has part: feature:705079-705234:1:exon
so has part: feature:705537-705686:1:exon
so has part: feature:706649-706787:1:exon
so has part: feature:707331-707515:1:exon
so has part: feature:708023-708244:1:exon
so has part: feature:709106-709320:1:exon
so has part: feature:709653-709719:1:exon
so has part: feature:709944-711164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686924-687054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:703565-703788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704332-704481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:705079-705234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705537-705686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:706649-706787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707331-707515:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:708023-708244:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:709106-709320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:709653-709719:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:709944-711164:1:exon

LOC117990627
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin isoform X1
translation: MSLCSVKSNLEINKIKLVMAETEGHKHRDINFHEGEGDEVVGKLSLQISCKTKHMTEKPAPAPKAGPHGVQIVNTGPDHSFILDEDALEELLLQEDIKDRSAVVISVAGAFRKGKSFLLDFFLRYMHHKYGAGGGGGEWLGSEDEPLVGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDGGRTPFQRLQFVVRDWSFPYEAPYGAQGGQTILQRRLKVSDKQHPELQSLRKHITSCFAEIACFLMPHPGLKVATSPDFDGRLNDIEPEFKRSLQQLVPMLLAPHNLMPKQINGQRVRSKELLHYFKSYMNIYRGNELPEPKSMLVATAEANNLTAVAEAREVYTTLMEEICGGARPFLQAQLLEAEHARIRDKALHAFRAKRKMGGDDFSRAYCEQLIQDLEDQFLQFRAHNESKNIFKAARTPSVLFAIALVFYVLSGVLGLVGLYPLANLCNLTMGVALLTLALWAYIRYSGEMRELGVTIDESASWLWENVMKPVYQAGIEKGMEHAAAAAAERAMGPSTPNANGKHKHL
SIO_010081: LOC117990627
subclass of: SO_0000673
so part of: LOC117990627
location: join(686946..687054,698579..698632,703565..703788,704332..704481,705079..705234,705537..705686,706649..706787,707331..707515,708023..708244,709106..709320,709653..709719,709944..710066)
location: region:686946-710066:1
so has part: feature:686946-687054:1:exon
so has part: feature:698579-698632:1:exon
so has part: feature:703565-703788:1:exon
so has part: feature:704332-704481:1:exon
so has part: feature:705079-705234:1:exon
so has part: feature:705537-705686:1:exon
so has part: feature:706649-706787:1:exon
so has part: feature:707331-707515:1:exon
so has part: feature:708023-708244:1:exon
so has part: feature:709106-709320:1:exon
so has part: feature:709653-709719:1:exon
so has part: feature:709944-710066:1:exon

XP_034833979.1
type: Protein
SIO_000068: ncbiprotein

position:686946:1
position: 686946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710066:1
position: 710066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686946-687054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698579-698632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703565-703788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704332-704481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705079-705234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:705537-705686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706649-706787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707331-707515:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:708023-708244:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:709106-709320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:709653-709719:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:709944-710066:1:exon

LOC117990627
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin isoform X3
translation: MSLCSVKSNLEINKIKLVMAETEGHKHRDINFHEGEVTEKPAPAPKAGPHGVQIVNTGPDHSFILDEDALEELLLQEDIKDRSAVVISVAGAFRKGKSFLLDFFLRYMHHKYGAGGGGGEWLGSEDEPLVGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDGGRTPFQRLQFVVRDWSFPYEAPYGAQGGQTILQRRLKVSDKQHPELQSLRKHITSCFAEIACFLMPHPGLKVATSPDFDGRLNDIEPEFKRSLQQLVPMLLAPHNLMPKQINGQRVRSKELLHYFKSYMNIYRGNELPEPKSMLVATAEANNLTAVAEAREVYTTLMEEICGGARPFLQAQLLEAEHARIRDKALHAFRAKRKMGGDDFSRAYCEQLIQDLEDQFLQFRAHNESKNIFKAARTPSVLFAIALVFYVLSGVLGLVGLYPLANLCNLTMGVALLTLALWAYIRYSGEMRELGVTIDESASWLWENVMKPVYQAGIEKGMEHAAAAAAERAMGPSTPNANGKHKHL
SIO_010081: LOC117990627
subclass of: SO_0000673
so part of: LOC117990627
location: join(686946..687054,703565..703788,704332..704481,705079..705234,705537..705686,706649..706787,707331..707515,708023..708244,709106..709320,709653..709719,709944..710066)
location: region:686946-710066:1
so has part: feature:686946-687054:1:exon
so has part: feature:703565-703788:1:exon
so has part: feature:704332-704481:1:exon
so has part: feature:705079-705234:1:exon
so has part: feature:705537-705686:1:exon
so has part: feature:706649-706787:1:exon
so has part: feature:707331-707515:1:exon
so has part: feature:708023-708244:1:exon
so has part: feature:709106-709320:1:exon
so has part: feature:709653-709719:1:exon
so has part: feature:709944-710066:1:exon

XP_034833981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:686946-687054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:703565-703788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704332-704481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:705079-705234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705537-705686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:706649-706787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707331-707515:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:708023-708244:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:709106-709320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:709653-709719:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:709944-710066:1:exon

LOC117990627
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990627
product: atlastin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034978089.1
SIO_010081: LOC117990627
subclass of: SO_0000673
so part of: LOC117990627
location: join(686950..687054,687220..687313,698579..698632,703565..703788,704332..704481,705079..705234,705537..705686,706649..706787,707331..707515,708023..708244,709106..709320,709653..709719,709944..711164)
location: region:686950-711164:1
so has part: feature:686950-687054:1:exon
so has part: feature:687220-687313:1:exon
so has part: feature:698579-698632:1:exon
so has part: feature:703565-703788:1:exon
so has part: feature:704332-704481:1:exon
so has part: feature:705079-705234:1:exon
so has part: feature:705537-705686:1:exon
so has part: feature:706649-706787:1:exon
so has part: feature:707331-707515:1:exon
so has part: feature:708023-708244:1:exon
so has part: feature:709106-709320:1:exon
so has part: feature:709653-709719:1:exon
so has part: feature:709944-711164:1:exon

position:686950:1
position: 686950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686950-687054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687220-687313:1:exon

position:687220:1
position: 687220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687313:1
position: 687313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:698579-698632:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703565-703788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704332-704481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:705079-705234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:705537-705686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706649-706787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707331-707515:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708023-708244:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:709106-709320:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:709653-709719:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:709944-711164:1:exon

LOC117990627
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990627
product: atlastin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978091.1
SIO_010081: LOC117990627
subclass of: SO_0000673
so part of: LOC117990627
location: join(686950..687054,687220..687313,703565..703788,704332..704481,705079..705234,705537..705686,706649..706787,707331..707515,708023..708244,709106..709320,709653..709719,709944..711164)
location: region:686950-711164:1
so has part: feature:686950-687054:1:exon
so has part: feature:687220-687313:1:exon
so has part: feature:703565-703788:1:exon
so has part: feature:704332-704481:1:exon
so has part: feature:705079-705234:1:exon
so has part: feature:705537-705686:1:exon
so has part: feature:706649-706787:1:exon
so has part: feature:707331-707515:1:exon
so has part: feature:708023-708244:1:exon
so has part: feature:709106-709320:1:exon
so has part: feature:709653-709719:1:exon
so has part: feature:709944-711164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686950-687054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687220-687313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703565-703788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704332-704481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705079-705234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:705537-705686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706649-706787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707331-707515:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:708023-708244:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:709106-709320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:709653-709719:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:709944-711164:1:exon

LOC117990627
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin isoform X2
translation: MREKEPSVPTASSVERRFDGTGARMTGGSDRTLESGDEVVGKLSLQISCKTKHMTEKPAPAPKAGPHGVQIVNTGPDHSFILDEDALEELLLQEDIKDRSAVVISVAGAFRKGKSFLLDFFLRYMHHKYGAGGGGGEWLGSEDEPLVGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDGGRTPFQRLQFVVRDWSFPYEAPYGAQGGQTILQRRLKVSDKQHPELQSLRKHITSCFAEIACFLMPHPGLKVATSPDFDGRLNDIEPEFKRSLQQLVPMLLAPHNLMPKQINGQRVRSKELLHYFKSYMNIYRGNELPEPKSMLVATAEANNLTAVAEAREVYTTLMEEICGGARPFLQAQLLEAEHARIRDKALHAFRAKRKMGGDDFSRAYCEQLIQDLEDQFLQFRAHNESKNIFKAARTPSVLFAIALVFYVLSGVLGLVGLYPLANLCNLTMGVALLTLALWAYIRYSGEMRELGVTIDESASWLWENVMKPVYQAGIEKGMEHAAAAAAERAMGPSTPNANGKHKHL
SIO_010081: LOC117990627
subclass of: SO_0000673
so part of: LOC117990627
location: join(687043..687054,687220..687313,698579..698632,703565..703788,704332..704481,705079..705234,705537..705686,706649..706787,707331..707515,708023..708244,709106..709320,709653..709719,709944..710066)
location: region:687043-710066:1
so has part: feature:687043-687054:1:exon
so has part: feature:687220-687313:1:exon
so has part: feature:698579-698632:1:exon
so has part: feature:703565-703788:1:exon
so has part: feature:704332-704481:1:exon
so has part: feature:705079-705234:1:exon
so has part: feature:705537-705686:1:exon
so has part: feature:706649-706787:1:exon
so has part: feature:707331-707515:1:exon
so has part: feature:708023-708244:1:exon
so has part: feature:709106-709320:1:exon
so has part: feature:709653-709719:1:exon
so has part: feature:709944-710066:1:exon

XP_034833980.1
type: Protein
SIO_000068: ncbiprotein

position:687043:1
position: 687043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687043-687054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687220-687313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:698579-698632:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703565-703788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704332-704481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:705079-705234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:705537-705686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706649-706787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707331-707515:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708023-708244:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:709106-709320:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:709653-709719:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:709944-710066:1:exon

LOC117990627
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin isoform X4
translation: MREKEPSVPTASSVERRFDGTGARMTGGSDRTLESVTEKPAPAPKAGPHGVQIVNTGPDHSFILDEDALEELLLQEDIKDRSAVVISVAGAFRKGKSFLLDFFLRYMHHKYGAGGGGGEWLGSEDEPLVGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDGGRTPFQRLQFVVRDWSFPYEAPYGAQGGQTILQRRLKVSDKQHPELQSLRKHITSCFAEIACFLMPHPGLKVATSPDFDGRLNDIEPEFKRSLQQLVPMLLAPHNLMPKQINGQRVRSKELLHYFKSYMNIYRGNELPEPKSMLVATAEANNLTAVAEAREVYTTLMEEICGGARPFLQAQLLEAEHARIRDKALHAFRAKRKMGGDDFSRAYCEQLIQDLEDQFLQFRAHNESKNIFKAARTPSVLFAIALVFYVLSGVLGLVGLYPLANLCNLTMGVALLTLALWAYIRYSGEMRELGVTIDESASWLWENVMKPVYQAGIEKGMEHAAAAAAERAMGPSTPNANGKHKHL
SIO_010081: LOC117990627
subclass of: SO_0000673
so part of: LOC117990627
location: join(687043..687054,687220..687313,703565..703788,704332..704481,705079..705234,705537..705686,706649..706787,707331..707515,708023..708244,709106..709320,709653..709719,709944..710066)
location: region:687043-710066:1
so has part: feature:687043-687054:1:exon
so has part: feature:687220-687313:1:exon
so has part: feature:703565-703788:1:exon
so has part: feature:704332-704481:1:exon
so has part: feature:705079-705234:1:exon
so has part: feature:705537-705686:1:exon
so has part: feature:706649-706787:1:exon
so has part: feature:707331-707515:1:exon
so has part: feature:708023-708244:1:exon
so has part: feature:709106-709320:1:exon
so has part: feature:709653-709719:1:exon
so has part: feature:709944-710066:1:exon

XP_034833982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:687043-687054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687220-687313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703565-703788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704332-704481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705079-705234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:705537-705686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706649-706787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707331-707515:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:708023-708244:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:709106-709320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:709653-709719:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:709944-710066:1:exon

LOC117990632
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(717981..727542)
location: region:717981-727542:-1
so has part: feature:717981-727542:-1:exon
subclass of: SO_0000010

117990632
type: Gene
SIO_000068: ncbigene

position:717981:-1
position: 717981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727542:-1
position: 727542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717981-727542:-1:exon

LOC117990632
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990632
product: atlastin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034978102.1
SIO_010081: LOC117990632
subclass of: SO_0000673
so part of: LOC117990632
location: complement(join(717981..718242,719472..719526,719885..720099,721318..721539,722066..722250,722496..722634,722841..722990,723499..723654,724102..724248,724984..725212,727395..727542))
location: region:717981-727542:-1
so has part: feature:727395-727542:-1:exon
so has part: feature:724984-725212:-1:exon
so has part: feature:724102-724248:-1:exon
so has part: feature:723499-723654:-1:exon
so has part: feature:722841-722990:-1:exon
so has part: feature:722496-722634:-1:exon
so has part: feature:722066-722250:-1:exon
so has part: feature:721318-721539:-1:exon
so has part: feature:719885-720099:-1:exon
so has part: feature:719472-719526:-1:exon
so has part: feature:717981-718242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727395-727542:-1:exon

position:727395:-1
position: 727395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:724984-725212:-1:exon

position:724984:-1
position: 724984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725212:-1
position: 725212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724102-724248:-1:exon

position:724102:-1
position: 724102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724248:-1
position: 724248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:723499-723654:-1:exon

position:723499:-1
position: 723499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723654:-1
position: 723654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:722841-722990:-1:exon

position:722841:-1
position: 722841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722990:-1
position: 722990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:722496-722634:-1:exon

position:722496:-1
position: 722496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722634:-1
position: 722634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:722066-722250:-1:exon

position:722066:-1
position: 722066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722250:-1
position: 722250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:721318-721539:-1:exon

position:721318:-1
position: 721318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721539:-1
position: 721539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:719885-720099:-1:exon

position:719885:-1
position: 719885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720099:-1
position: 720099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:719472-719526:-1:exon

position:719472:-1
position: 719472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719526:-1
position: 719526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:717981-718242:-1:exon

position:718242:-1
position: 718242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990632
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990632
product: atlastin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034978101.1
SIO_010081: LOC117990632
subclass of: SO_0000673
so part of: LOC117990632
location: complement(join(717981..718242,719472..719526,719885..720099,721318..721539,722066..722250,722496..722634,722841..722990,723499..723654,724102..724248,724984..725197,727389..727540))
location: region:717981-727540:-1
so has part: feature:727389-727540:-1:exon
so has part: feature:724984-725197:-1:exon
so has part: feature:724102-724248:-1:exon
so has part: feature:723499-723654:-1:exon
so has part: feature:722841-722990:-1:exon
so has part: feature:722496-722634:-1:exon
so has part: feature:722066-722250:-1:exon
so has part: feature:721318-721539:-1:exon
so has part: feature:719885-720099:-1:exon
so has part: feature:719472-719526:-1:exon
so has part: feature:717981-718242:-1:exon

position:727540:-1
position: 727540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727389-727540:-1:exon

position:727389:-1
position: 727389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:724984-725197:-1:exon

position:725197:-1
position: 725197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724102-724248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723499-723654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722841-722990:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722496-722634:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722066-722250:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:721318-721539:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:719885-720099:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:719472-719526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717981-718242:-1:exon

LOC117990632
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin-like
translation: MEDLKSGRGIQVVTPGPEHTFALDEEALESLLLRDDVKDCSIVVISVAGAFRKGKSFLLDFFLRYMHHKYNLGGSGDWLGSEDEPLQGFGWRGGSERDTTGLLLWSQPFKTTLENGEKVVIYLMDTQGTFDSESTVRDNATVFALSTMLSSVQIYNLSQNIEEDDLQHLQLFTDYGRLAQETSGGKPFQRLQLLVRDWSFPYEHAYGVEGGQELLTKRLTVREGQHHELQSLRKHIASCFEELACFLMPHPGLNVATNPEFNGKLSAISQDFKIALKQFVPMLLAPQNLIPKRIGSQQLKSRDLLLYFRSYMNIFNGTSLPEPKTILEATAEANNLSAVAEAKEVYETLMEEIAGGAKPYLQPQLLEEEHRRARDKALHSFHSKKKMGGDSLSATYRIKLTKELEEQYEQYRLHNEDKNLLRKLGTAAVLGALALACYLVSILAGVLGLQTFAMLGQTAAIACVGMLFVWAYSRATGNMRELGSQMDQIADSVMELAGQYAGRQAAAVAMSYSTDKTSYSTDKKQS
SIO_010081: LOC117990632
subclass of: SO_0000673
so part of: LOC117990632
location: complement(join(718138..718242,719472..719526,719885..720099,721318..721539,722066..722250,722496..722634,722841..722990,723499..723654,724102..724248,724984..725190))
location: region:718138-725190:-1
so has part: feature:724984-725190:-1:exon
so has part: feature:724102-724248:-1:exon
so has part: feature:723499-723654:-1:exon
so has part: feature:722841-722990:-1:exon
so has part: feature:722496-722634:-1:exon
so has part: feature:722066-722250:-1:exon
so has part: feature:721318-721539:-1:exon
so has part: feature:719885-720099:-1:exon
so has part: feature:719472-719526:-1:exon
so has part: feature:718138-718242:-1:exon

XP_034833992.1
type: Protein
SIO_000068: ncbiprotein

position:718138:-1
position: 718138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725190:-1
position: 725190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724984-725190:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724102-724248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723499-723654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722841-722990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722496-722634:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722066-722250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721318-721539:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:719885-720099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:719472-719526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718138-718242:-1:exon

LOC117990632
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin-like
translation: MEDLKSGRGIQVVTPGPEHTFALDEEALESLLLRDDVKDCSIVVISVAGAFRKGKSFLLDFFLRYMHHKYNLGGSGDWLGSEDEPLQGFGWRGGSERDTTGLLLWSQPFKTTLENGEKVVIYLMDTQGTFDSESTVRDNATVFALSTMLSSVQIYNLSQNIEEDDLQHLQLFTDYGRLAQETSGGKPFQRLQLLVRDWSFPYEHAYGVEGGQELLTKRLTVREGQHHELQSLRKHIASCFEELACFLMPHPGLNVATNPEFNGKLSAISQDFKIALKQFVPMLLAPQNLIPKRIGSQQLKSRDLLLYFRSYMNIFNGTSLPEPKTILEATAEANNLSAVAEAKEVYETLMEEIAGGAKPYLQPQLLEEEHRRARDKALHSFHSKKKMGGDSLSATYRIKLTKELEEQYEQYRLHNEDKNLLRKLGTAAVLGALALACYLVSILAGVLGLQTFAMLGQTAAIACVGMLFVWAYSRATGNMRELGSQMDQIADSVMELAGQYAGRQAAAVAMSYSTDKTSYSTDKKQS
SIO_010081: LOC117990632
subclass of: SO_0000673
so part of: LOC117990632
location: complement(join(718138..718242,719472..719526,719885..720099,721318..721539,722066..722250,722496..722634,722841..722990,723499..723654,724102..724248,724984..725190))
location: region:718138-725190:-1
so has part: feature:724984-725190:-1:exon
so has part: feature:724102-724248:-1:exon
so has part: feature:723499-723654:-1:exon
so has part: feature:722841-722990:-1:exon
so has part: feature:722496-722634:-1:exon
so has part: feature:722066-722250:-1:exon
so has part: feature:721318-721539:-1:exon
so has part: feature:719885-720099:-1:exon
so has part: feature:719472-719526:-1:exon
so has part: feature:718138-718242:-1:exon

XP_034833993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:724984-725190:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724102-724248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723499-723654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722841-722990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722496-722634:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722066-722250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721318-721539:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:719885-720099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:719472-719526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718138-718242:-1:exon

LOC117990637
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(734760..737467)
location: region:734760-737467:-1
so has part: feature:734760-737467:-1:exon
subclass of: SO_0000010

117990637
type: Gene
SIO_000068: ncbigene

position:734760:-1
position: 734760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737467:-1
position: 737467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734760-737467:-1:exon

LOC117990637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990637
product: peptidyl-prolyl cis-trans isomerase FKBP65-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_034978107.1
SIO_010081: LOC117990637
subclass of: SO_0000673
so part of: LOC117990637
location: complement(join(734760..735061,736413..736559,736878..737467))
location: region:734760-737467:-1
so has part: feature:736878-737467:-1:exon
so has part: feature:736413-736559:-1:exon
so has part: feature:734760-735061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:736878-737467:-1:exon

position:736878:-1
position: 736878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736413-736559:-1:exon

position:736413:-1
position: 736413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736559:-1
position: 736559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734760-735061:-1:exon

position:735061:-1
position: 735061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP65-like
translation: MSIYEKQRKSSSGPRVHEFSVDKICMEKKVLLENYHRRLLAEVQNCELITTMNKETIVSSRPDREIRKTVVRPGDYTMVPYEDSRCKIRLCNVKSENKAGPCEIDPECRILNSPFDGNVIIGDMDSYIDKDFELVLQQMCLGEVCDARFIYRNVFGDLMQEISCRLELVDLTEEQLISDWSWARLFESAVHHKERGVQLVKDKRIVDGFRRFSKALKMLVAIEPVDRVRVDEERIKELLNMRVKLFNNMAHCQLQFEEYGATLDLCSRALTLDPDNIKSLYRRSIAYTGLFMYEEAWGDIQRALEIDPMDKASIAKAKELRPHIERINKDYSNVIKKMFG
SIO_010081: LOC117990637
subclass of: SO_0000673
so part of: LOC117990637
location: complement(join(734765..735061,736413..736559,736878..737456))
location: region:734765-737456:-1
so has part: feature:736878-737456:-1:exon
so has part: feature:736413-736559:-1:exon
so has part: feature:734765-735061:-1:exon

XP_034833998.1
type: Protein
SIO_000068: ncbiprotein

position:734765:-1
position: 734765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737456:-1
position: 737456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736878-737456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736413-736559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:734765-735061:-1:exon

LOC117990626
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 737777..741962
location: region:737777-741962:1
so has part: feature:737777-741962:1:exon
subclass of: SO_0000010

117990626
type: Gene
SIO_000068: ncbigene

position:737777:1
position: 737777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741962:1
position: 741962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737777-741962:1:exon

LOC117990626
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990626
product: uncharacterized LOC117990626
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034978087.1
SIO_010081: LOC117990626
subclass of: SO_0000673
so part of: LOC117990626
location: join(737777..737871,738029..738121,738341..738512,738650..739391,739914..740448,741146..741251,741634..741962)
location: region:737777-741962:1
so has part: feature:737777-737871:1:exon
so has part: feature:738029-738121:1:exon
so has part: feature:738341-738512:1:exon
so has part: feature:738650-739391:1:exon
so has part: feature:739914-740448:1:exon
so has part: feature:741146-741251:1:exon
so has part: feature:741634-741962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:737777-737871:1:exon

position:737871:1
position: 737871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:738029-738121:1:exon

position:738029:1
position: 738029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738121:1
position: 738121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:738341-738512:1:exon

position:738341:1
position: 738341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738512:1
position: 738512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:738650-739391:1:exon

position:738650:1
position: 738650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739391:1
position: 739391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:739914-740448:1:exon

position:739914:1
position: 739914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740448:1
position: 740448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:741146-741251:1:exon

position:741146:1
position: 741146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741251:1
position: 741251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:741634-741962:1:exon

position:741634:1
position: 741634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990626
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117990626
translation: MTLLLKSVWRNVLRGGQLNNTLRCTSFSSVSVTETRSKTPDNIMMTIKTAPSAGEVLAAVQANLPLLTHRHMLQALRSLFELQKTSKYDKNQDTNAIIKNPTFSVLCQNFKKHARALETNEIVEAVKVLSYLKVPVDSLIVQTMLQMIRCNINMLNTQQIMFVDFILSQFDEKNYLVDALKLALPLAFQIHLPLELDNQDLPLLRDMLIYSCSRDLPDRCINNVVTGLLLHDQAINAHMAKSIIWALCQVNCTEQAFPTRVQLLNICCDILTHSLDNLSYDDVLRTAARLKGRILEKHPEYYHQQLMDAIANYVINNNVDFEKGLLVARVLSRIAHTHLALVEYLCQKAASNPETLSNARTNIFFGFINCLANNNFTPEPDQWVELRRQISANPVLNATNAALPWAKLCLELASLGHYEDRLLNRVFSKEFLDEYLARDNNTLDYLQLLTLYQAVQTFYSEDYKLPENVLERAKDMYPVHSLTGVLVEHLARGLGGPEYVAKNVVLPNGIVSDVLVAVKGGYPMELPAISSNLKLPLQQLNIPQDAIVICIMNFNQGCFSMNSNRLRGPFRLILDILEKQSYATVAFNVNEWLSSPAHERTPYLMREIGYKCGEIGLKLSAT
SIO_010081: LOC117990626
subclass of: SO_0000673
so part of: LOC117990626
location: join(738034..738121,738341..738512,738650..739391,739914..740448,741146..741251,741634..741859)
location: region:738034-741859:1
so has part: feature:738034-738121:1:exon
so has part: feature:738341-738512:1:exon
so has part: feature:738650-739391:1:exon
so has part: feature:739914-740448:1:exon
so has part: feature:741146-741251:1:exon
so has part: feature:741634-741859:1:exon

XP_034833978.1
type: Protein
SIO_000068: ncbiprotein

position:738034:1
position: 738034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741859:1
position: 741859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738034-738121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738341-738512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738650-739391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739914-740448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741146-741251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741634-741859:1:exon

LOC117990630
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 743079..754613
location: region:743079-754613:1
so has part: feature:743079-754613:1:exon
subclass of: SO_0000010

117990630
type: Gene
SIO_000068: ncbigene

position:743079:1
position: 743079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754613:1
position: 754613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743079-754613:1:exon

LOC117990630
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990630
product: putative phospholipase B-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978093.1
SIO_010081: LOC117990630
subclass of: SO_0000673
so part of: LOC117990630
location: join(743079..743322,743910..744038,744532..744646,745387..745481,746415..746573,747560..747680,748585..748689,749160..749266,750641..750757,751538..751697,752117..752261,753414..753558,754325..754613)
location: region:743079-754613:1
so has part: feature:743079-743322:1:exon
so has part: feature:743910-744038:1:exon
so has part: feature:744532-744646:1:exon
so has part: feature:745387-745481:1:exon
so has part: feature:746415-746573:1:exon
so has part: feature:747560-747680:1:exon
so has part: feature:748585-748689:1:exon
so has part: feature:749160-749266:1:exon
so has part: feature:750641-750757:1:exon
so has part: feature:751538-751697:1:exon
so has part: feature:752117-752261:1:exon
so has part: feature:753414-753558:1:exon
so has part: feature:754325-754613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743079-743322:1:exon

position:743322:1
position: 743322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:743910-744038:1:exon

position:743910:1
position: 743910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744038:1
position: 744038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:744532-744646:1:exon

position:744532:1
position: 744532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744646:1
position: 744646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:745387-745481:1:exon

position:745387:1
position: 745387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745481:1
position: 745481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:746415-746573:1:exon

position:746415:1
position: 746415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746573:1
position: 746573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:747560-747680:1:exon

position:747560:1
position: 747560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747680:1
position: 747680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:748585-748689:1:exon

position:748585:1
position: 748585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748689:1
position: 748689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:749160-749266:1:exon

position:749160:1
position: 749160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749266:1
position: 749266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:750641-750757:1:exon

position:750641:1
position: 750641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750757:1
position: 750757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:751538-751697:1:exon

position:751538:1
position: 751538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751697:1
position: 751697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:752117-752261:1:exon

position:752117:1
position: 752117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752261:1
position: 752261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:753414-753558:1:exon

position:753414:1
position: 753414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753558:1
position: 753558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:754325-754613:1:exon

position:754325:1
position: 754325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative phospholipase B-like 2
translation: MFLHGSYLLKCCVLVLLSVVTLGESKYGFVTWSYGKAEVSVTDISAEIPDVHIARATYTNEINTTGWAYLELHTTPGASDEKQAYAAGFLEGFLTRDLIWMHWQNVLKGYCYNKTEVCGMIEDFVDQNEDYIASMIADNPSDPYWYQMKLYYIQIEGLAVGYNQATSDAYEWLTVRDIIWLNMLGDLDDIAFALSMPRETPEGLLFGEHCSGLIKLLPDLSNLYTSHVTWNSYQSMLRFQKMYVLNYKLSPDSEELIPGRKMAFTSYPGFVQSTDDFYIISTGLVTAETTIGNSNRTLYEYIEPVGQIMEYARAMVANRIASDGKQWVETFRLHNSGTYNNQWYVVDYNKFKASKGQTPGVVEPGLLWVVEQLPGNTEAADLTEHLKKTSYFPSYNIPYFPRIFNLSGGNDRVATFGDWFGYHTNPRAKIFAEKQANIGNVRDMFTTMRYNDFKHDPLARCECRPPYSACNAIAARNDLNLANGTYPFRALGHRSHGATDAKVTSATLRRTLQFLSVASPTYNISRGIPPFRWSEFDMGPHISHVGHPDLWMFPPVLHRWEWG
SIO_010081: LOC117990630
subclass of: SO_0000673
so part of: LOC117990630
location: join(743126..743322,743910..744038,744532..744646,745387..745481,746415..746573,747560..747680,748585..748689,749160..749266,750641..750757,751538..751697,752117..752261,753414..753558,754325..754421)
location: region:743126-754421:1
so has part: feature:743126-743322:1:exon
so has part: feature:743910-744038:1:exon
so has part: feature:744532-744646:1:exon
so has part: feature:745387-745481:1:exon
so has part: feature:746415-746573:1:exon
so has part: feature:747560-747680:1:exon
so has part: feature:748585-748689:1:exon
so has part: feature:749160-749266:1:exon
so has part: feature:750641-750757:1:exon
so has part: feature:751538-751697:1:exon
so has part: feature:752117-752261:1:exon
so has part: feature:753414-753558:1:exon
so has part: feature:754325-754421:1:exon

XP_034833984.1
type: Protein
SIO_000068: ncbiprotein

position:743126:1
position: 743126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754421:1
position: 754421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743126-743322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743910-744038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744532-744646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745387-745481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746415-746573:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:747560-747680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748585-748689:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749160-749266:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750641-750757:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751538-751697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:752117-752261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:753414-753558:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:754325-754421:1:exon

LOC117990643
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(755294..757236)
location: region:755294-757236:-1
so has part: feature:755294-757236:-1:exon
subclass of: SO_0000010

117990643
type: Gene
SIO_000068: ncbigene

position:755294:-1
position: 755294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757236:-1
position: 757236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755294-757236:-1:exon

LOC117990643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990643
product: AP-2 complex subunit sigma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034978115.1
SIO_010081: LOC117990643
subclass of: SO_0000673
so part of: LOC117990643
location: complement(join(755294..755458,755786..755896,756171..756344,757071..757236))
location: region:755294-757236:-1
so has part: feature:757071-757236:-1:exon
so has part: feature:756171-756344:-1:exon
so has part: feature:755786-755896:-1:exon
so has part: feature:755294-755458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757071-757236:-1:exon

position:757071:-1
position: 757071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:756171-756344:-1:exon

position:756171:-1
position: 756171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756344:-1
position: 756344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:755786-755896:-1:exon

position:755786:-1
position: 755786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755896:-1
position: 755896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:755294-755458:-1:exon

position:755458:-1
position: 755458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-2 complex subunit sigma
translation: MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLNSLE
SIO_010081: LOC117990643
subclass of: SO_0000673
so part of: LOC117990643
location: complement(join(755795..755896,756171..756344,757071..757163))
location: region:755795-757163:-1
so has part: feature:757071-757163:-1:exon
so has part: feature:756171-756344:-1:exon
so has part: feature:755795-755896:-1:exon

XP_034834006.1
type: Protein
SIO_000068: ncbiprotein

position:755795:-1
position: 755795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757163:-1
position: 757163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757071-757163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:756171-756344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755795-755896:-1:exon

LOC117990634
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 757799..759828
location: region:757799-759828:1
so has part: feature:757799-759828:1:exon
subclass of: SO_0000010

117990634
type: Gene
SIO_000068: ncbigene

position:757799:1
position: 757799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759828:1
position: 759828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757799-759828:1:exon

LOC117990634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990634
product: hippocampus abundant transcript 1 protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978105.1
SIO_010081: LOC117990634
subclass of: SO_0000673
so part of: LOC117990634
location: 757799..759828
location: region:757799-759828:1
so has part: feature:757799-759828:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757799-759828:1:exon

LOC117990634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hippocampus abundant transcript 1 protein
translation: MTPTKTVEVEMVVIRNRKTVMKDGIMTMSGIGEPSVFHALVVIFLEFFAWGLLTMPIMTVLNATFPEHTFLMNGLIMGIKGILSFLSAPLIGALSDVWGRKFFLLVTVFFTCAPIPLMTINTWWFFAMISISGVFAVTFSIVFAYVADVTTEAERSRAYGLVSATFAASMVISPALGTYLMHTYSESLVVAAATAVAVLDVFFIMVAVPESLPEKVRPSGWGANISWEQADPFAALRKVGAERTVLMLCVAVFLSYLPEAGEYSCIFMYLKLVMGFGMTKVAIFIALVGVLSIAVQVVLGFLMRSLGAKHTIMLGLLFEMMQLMWYGFGSRSWMMWAAGVLAALGSVTYPAISAYVSVNSRADRQGVVQGMVTGVRGLCNGLGPAMFGVIFSLFHVDLNEEHAAADIDRPDEEKYTRLVPGPPFVLGALLVICALLVAAFLPEDGTVGARRASPDLRFEMEHGRRVAGPLSPLMAPESAAL
SIO_010081: LOC117990634
subclass of: SO_0000673
so part of: LOC117990634
location: 757972..759417
location: region:757972-759417:1
so has part: feature:757972-759417:1:exon

XP_034833996.1
type: Protein
SIO_000068: ncbiprotein

position:757972:1
position: 757972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759417:1
position: 759417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757972-759417:1:exon

LOC117990791
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(792065..799103)
location: region:792065-799103:-1
so has part: feature:792065-799103:-1:exon
subclass of: SO_0000010

117990791
type: Gene
SIO_000068: ncbigene

position:792065:-1
position: 792065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799103:-1
position: 799103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:792065-799103:-1:exon

LOC117990791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990791
product: hyphal wall protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978283.1
SIO_010081: LOC117990791
subclass of: SO_0000673
so part of: LOC117990791
location: complement(join(792065..792471,793244..793501,793789..793932,794660..797024,798140..798852,798935..799103))
location: region:792065-799103:-1
so has part: feature:798935-799103:-1:exon
so has part: feature:798140-798852:-1:exon
so has part: feature:794660-797024:-1:exon
so has part: feature:793789-793932:-1:exon
so has part: feature:793244-793501:-1:exon
so has part: feature:792065-792471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798935-799103:-1:exon

position:798935:-1
position: 798935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:798140-798852:-1:exon

position:798140:-1
position: 798140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798852:-1
position: 798852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:794660-797024:-1:exon

position:794660:-1
position: 794660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797024:-1
position: 797024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:793789-793932:-1:exon

position:793789:-1
position: 793789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793932:-1
position: 793932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:793244-793501:-1:exon

position:793244:-1
position: 793244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793501:-1
position: 793501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:792065-792471:-1:exon

position:792471:-1
position: 792471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyphal wall protein 2-like
translation: MLKMSTRSGKRIHGSIHENAVDSVAEVKSERKTRGKHQKENYNDVSLKKKRKNYVRYPCEEDVAAASNAEKLLQRTPRNTLKEQNVIATESETLNDDRTARLLRRTRKSEPANNTETIDSNKEIKTKSSKTNKKIKIVTSENTLEPILQPIKKKSNKKKNKLSSGSLIVEDIPQTNNGKTNLSDMSLETFYSAAGSPVKDNEIIENSKKKLDALSKSTRTTRSHGQENVVVNHEFEDMLSKATRSKMHSVENTNLENAELKTIKKKNIKRKKKLTNENAINNSLGKATNAEDVNNSPVMGVDNIIQDKQLTDSFYNSLSFNNSLKNSSKKRRSKINSSNDKIENLSTFETVYNVNTPDKLIILDTTKENNSKKNSTYDKINVSETNLNASFNKEVFNSISVNHNDETQDVFLKRTKKSLKKKKTSTYDKINVSETNSNATFEKDISNECVNQSEHSENDSTNLNITDKNSIKKGRNLTYDKINDTATNFNATFETEITNGSDNRSKNLQDKSILNSTNSNRKTRNSTYDKINFSETSLNATLDEEMCENPMINVSEESQNVLTNGMKSSDKKKRKSSKRKSTFDEIDTSIINLDATYEKDNSNPKIQTVHNETQDKELRKLRQFSKISLDQDESSNLNTTYDKNSITNSQPNSRNNSTFDKSAKISTTFEMVINAKLDATFDKSENNGMRRGSSLISSDTTDNVSSDMSKDISRISVTSDESMVDNVVNTTPFLIESSMDDSRVNISSHEAKKSTKQNTEIENAVSPPKLQKANKDNKDATLEGTNIEMKSKTPPNCEEKGTEMTSKTPLLKRDGTYTEIKYSTPTKSEGRFIETKKVTTPKSKGTFTETKVPNTPIREGTYTELKTAITPLKREGTYTELNPTTPPPKNNKINTRNTAKTPIKFNNTVENNNATSPLKREGTFTKYLNVPESPKVINVNKTPTRRKSLPSPGRTPFPAFKNSSKELEKSEKSILNVTRSVEKPKRRSSLVEYLPRATKVMFCSPVATPIVVGQMKGKIIKSNLKGSDKSFVFDESASRSARPPRKRSHTQSEAEGVGSKRKRLTEDQEQSAARLSRPRTASASGKLQDPGTPSKKASTSNKSKTGVTPTKSKSEGRVLRTKLPNFAALHQKRFAKMESLDECQERKAKRARQLLTPTGSVNLLERISPKEMQPSTEAQPNPKKAETPKKSIIPSEYKGYTRFGFKLNTEVNPFSVSAKTETKPKENQESTIKPLKRQETRLPLPSLAGATKQRKEAAKLTVMREKSFTERRDVKRQENRTIIKGVRTNRRFDLQMKMRNVNN
SIO_010081: LOC117990791
subclass of: SO_0000673
so part of: LOC117990791
location: complement(join(792071..792471,793244..793501,793789..793932,794660..797024,798140..798852,798935..798965))
location: region:792071-798965:-1
so has part: feature:798935-798965:-1:exon
so has part: feature:798140-798852:-1:exon
so has part: feature:794660-797024:-1:exon
so has part: feature:793789-793932:-1:exon
so has part: feature:793244-793501:-1:exon
so has part: feature:792071-792471:-1:exon

XP_034834174.1
type: Protein
SIO_000068: ncbiprotein

position:792071:-1
position: 792071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798965:-1
position: 798965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798935-798965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798140-798852:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794660-797024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793789-793932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793244-793501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:792071-792471:-1:exon

LOC117990644
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 800228..801722
location: region:800228-801722:1
so has part: feature:800228-801722:1:exon
subclass of: SO_0000010

117990644
type: Gene
SIO_000068: ncbigene

position:800228:1
position: 800228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801722:1
position: 801722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800228-801722:1:exon

LOC117990644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990644
product: ATP synthase-coupling factor 6, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034978116.1
SIO_010081: LOC117990644
subclass of: SO_0000673
so part of: LOC117990644
location: join(800228..800257,800405..800550,801465..801722)
location: region:800228-801722:1
so has part: feature:800228-800257:1:exon
so has part: feature:800405-800550:1:exon
so has part: feature:801465-801722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:800228-800257:1:exon

position:800257:1
position: 800257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:800405-800550:1:exon

position:800405:1
position: 800405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800550:1
position: 800550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:801465-801722:1:exon

position:801465:1
position: 801465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial
translation: MLTSSLLGGLRAARASVVVTRNLAAAQKVADPIQQLFLDKIREYKQKSVGGKLVDPSPAIEKELKAEQEKLERQFGGGSGVDMTSFPSFKFEEPKLDPIDEQAAPAKK
SIO_010081: LOC117990644
subclass of: SO_0000673
so part of: LOC117990644
location: join(800405..800550,801465..801645)
location: region:800405-801645:1
so has part: feature:800405-800550:1:exon
so has part: feature:801465-801645:1:exon

XP_034834007.1
type: Protein
SIO_000068: ncbiprotein

position:801645:1
position: 801645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800405-800550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801465-801645:1:exon

LOC117990793
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 807654..809438
location: region:807654-809438:1
so has part: feature:807654-809438:1:exon
subclass of: SO_0000010

117990793
type: Gene
SIO_000068: ncbigene

position:807654:1
position: 807654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809438:1
position: 809438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807654-809438:1:exon

LOC117990793
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990793
product: uncharacterized LOC117990793
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034978284.1
SIO_010081: LOC117990793
subclass of: SO_0000673
so part of: LOC117990793
location: join(807654..807692,807936..809438)
location: region:807654-809438:1
so has part: feature:807654-807692:1:exon
so has part: feature:807936-809438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807654-807692:1:exon

position:807692:1
position: 807692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807936-809438:1:exon

position:807936:1
position: 807936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990793
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117990793
translation: MDSKNPHPPEIKEWSDIRCLKIASQDQFPAAVKDLKVQRNIISRYLNFYLGGKIQKGLNARDLTLAVVAIMPISSSSEEFIWPESEYGENGNLFFLTPHDKLKYDLSKVFEKRAVEKDPEDDNSNGEEVDNQADTDVDAYMNKEDITNNNSDTDHDSENEEETSSNKETTHETHDQRNGTSTSRPSSSKPVPSITALQWYRPKRPPINVTPSEETTYGPVENANFCTACNRLLEAWDHNVTARISLKYFFAMAALFVMRAKAKTFHNLTKYFSKRIFNNYFLRELNHYTPPHRGFLKKSWKAFRETDTRNQVMFAKLVITSLMHPTRLSNFEKQNIIKYAVLSHIAYFGMGIINMLQQLAIFTDSEFKILFKSLYSEETAASWNRVNDFFKKYLNKEAKQYTIHWAGVIESESVKQLSCSNNYELAVVIAVFVEKLTNNSGVWQSAWVGKGSRLDKCKQLGCKLYNDYQELSKEQTLFSDTEMLQKILGGIISSF
SIO_010081: LOC117990793
subclass of: SO_0000673
so part of: LOC117990793
location: 807951..809438
location: region:807951-809438:1
so has part: feature:807951-809438:1:exon

XP_034834175.1
type: Protein
SIO_000068: ncbiprotein

position:807951:1
position: 807951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807951-809438:1:exon

LOC117990620
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 811025..860433
location: region:811025-860433:1
so has part: feature:811025-860433:1:exon
subclass of: SO_0000010

117990620
type: Gene
SIO_000068: ncbigene

position:811025:1
position: 811025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860433:1
position: 860433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811025-860433:1:exon

LOC117990620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990620
product: AMP deaminase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 428 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034978076.1
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(811025..811189,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,860297..860433)
location: region:811025-860433:1
so has part: feature:811025-811189:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:860297-860433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811025-811189:1:exon

position:811189:1
position: 811189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

position:829520:1
position: 829520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829661:1
position: 829661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

position:833140:1
position: 833140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833305:1
position: 833305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

position:833569:1
position: 833569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833755:1
position: 833755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

position:834226:1
position: 834226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834439:1
position: 834439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

position:835023:1
position: 835023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835148:1
position: 835148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

position:845642:1
position: 845642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845735:1
position: 845735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

position:845807:1
position: 845807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845911:1
position: 845911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

position:846357:1
position: 846357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846488:1
position: 846488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

position:846911:1
position: 846911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847074:1
position: 847074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

position:847371:1
position: 847371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847494:1
position: 847494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

position:847839:1
position: 847839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848005:1
position: 848005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

position:849077:1
position: 849077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849197:1
position: 849197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

position:849861:1
position: 849861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850034:1
position: 850034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

position:850410:1
position: 850410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850520:1
position: 850520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

position:851031:1
position: 851031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851168:1
position: 851168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:860297-860433:1:exon

position:860297:1
position: 860297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990620
product: AMP deaminase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 428 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034978079.1
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(811025..811189,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,856332..856365,860297..860353)
location: region:811025-860353:1
so has part: feature:811025-811189:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:856332-856365:1:exon
so has part: feature:860297-860353:1:exon

position:860353:1
position: 860353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811025-811189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:856332-856365:1:exon

position:856332:1
position: 856332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856365:1
position: 856365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:860297-860353:1:exon

LOC117990620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990620
product: AMP deaminase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 428 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_034978080.1
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(811025..811189,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,852839..853030)
location: region:811025-853030:1
so has part: feature:811025-811189:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:852839-853030:1:exon

position:853030:1
position: 853030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811025-811189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:852839-853030:1:exon

position:852839:1
position: 852839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 2 isoform X1
translation: MAAGFVGSTKSFPFSFDMDVEEEEPERDTPHLNKRIGSESPTSAVGAEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAECGQSTRSFAGSDAGGVAGVFDETSRLRIDDDDLDVILPHFQRVAISGEDTSGVPLEDLQQASSYLVQALEIRKRYMDMSQQSFVTITTRFLRSMDADAPPNHTPGIKVPKSHIADHIVHPPFKDKDPWECPMPEPKGYTIKSDRGVFNLYRNTEKGEERVPYEYVDLTQYIQDMNIMCNMIADGPLKSFCYRRLSYLSSKFQLHVLLNELRELASQKAVPHRDFYNIRKVDTHIHAASCMNQKHLLRFIKKTLKNHADEVVTLHKGTPMTLKAVFQSMNLSTYDLTVDMLDVHADRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYMNGKYFARIIKEVASDLEESKYQNAELRLSIYGKSPGEWAKLAKWAIQYDVHSNNVRWLLQIPRLYDIFKSNKIMNNFQEFLSNIFQPLFEVTNDPNSNLELHKFLTHVIGFDSVDDESKPENPMLDADVRIPADWDDEENPPYAYYLYYMFANITVLNHFRKEQGLNTFVLRPHCGEAGPVQHLVCGFMLAENISHGLLLRKVPVLQYLYYLAQISIAMSPLSNNSLFLNYHRNPLPEFLARGLCITLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHEMKQYWLGPYYQKEGVAGNDITRTNVPDIRISFRYETLLDELTNIFKARHGFSLLQTCPAPPAPPVTPPPPNFNAPIVSLKRPSLV
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(811081..811189,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,860297..860416)
location: region:811081-860416:1
so has part: feature:811081-811189:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:860297-860416:1:exon

XP_034833967.1
type: Protein
SIO_000068: ncbiprotein

position:811081:1
position: 811081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860416:1
position: 860416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811081-811189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860297-860416:1:exon

LOC117990620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 2 isoform X4
translation: MAAGFVGSTKSFPFSFDMDVEEEEPERDTPHLNKRIGSESPTSAVGAEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAECGQSTRSFAGSDAGGVAGVFDETSRLRIDDDDLDVILPHFQRVAISGEDTSGVPLEDLQQASSYLVQALEIRKRYMDMSQQSFVTITTRFLRSMDADAPPNHTPGIKVPKSHIADHIVHPPFKDKDPWECPMPEPKGYTIKSDRGVFNLYRNTEKGEERVPYEYVDLTQYIQDMNIMCNMIADGPLKSFCYRRLSYLSSKFQLHVLLNELRELASQKAVPHRDFYNIRKVDTHIHAASCMNQKHLLRFIKKTLKNHADEVVTLHKGTPMTLKAVFQSMNLSTYDLTVDMLDVHADRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYMNGKYFARIIKEVASDLEESKYQNAELRLSIYGKSPGEWAKLAKWAIQYDVHSNNVRWLLQIPRLYDIFKSNKIMNNFQEFLSNIFQPLFEVTNDPNSNLELHKFLTHVIGFDSVDDESKPENPMLDADVRIPADWDDEENPPYAYYLYYMFANITVLNHFRKEQGLNTFVLRPHCGEAGPVQHLVCGFMLAENISHGLLLRKVPVLQYLYYLAQISIAMSPLSNNSLFLNYHRNPLPEFLARGLCITLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHEMKQYWLGPYYQKEGVAGNDITRTNVPDIRISFRYETLLDELTNIFKIKRSGSPMPP
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(811081..811189,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,856332..856364)
location: region:811081-856364:1
so has part: feature:811081-811189:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:856332-856364:1:exon

XP_034833970.1
type: Protein
SIO_000068: ncbiprotein

position:856364:1
position: 856364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811081-811189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:856332-856364:1:exon

LOC117990620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 2 isoform X5
translation: MAAGFVGSTKSFPFSFDMDVEEEEPERDTPHLNKRIGSESPTSAVGAEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAECGQSTRSFAGSDAGGVAGVFDETSRLRIDDDDLDVILPHFQRVAISGEDTSGVPLEDLQQASSYLVQALEIRKRYMDMSQQSFVTITTRFLRSMDADAPPNHTPGIKVPKSHIADHIVHPPFKDKDPWECPMPEPKGYTIKSDRGVFNLYRNTEKGEERVPYEYVDLTQYIQDMNIMCNMIADGPLKSFCYRRLSYLSSKFQLHVLLNELRELASQKAVPHRDFYNIRKVDTHIHAASCMNQKHLLRFIKKTLKNHADEVVTLHKGTPMTLKAVFQSMNLSTYDLTVDMLDVHADRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYMNGKYFARIIKEVASDLEESKYQNAELRLSIYGKSPGEWAKLAKWAIQYDVHSNNVRWLLQIPRLYDIFKSNKIMNNFQEFLSNIFQPLFEVTNDPNSNLELHKFLTHVIGFDSVDDESKPENPMLDADVRIPADWDDEENPPYAYYLYYMFANITVLNHFRKEQGLNTFVLRPHCGEAGPVQHLVCGFMLAENISHGLLLRKVPVLQYLYYLAQISIAMSPLSNNSLFLNYHRNPLPEFLARGLCITLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHEMKQYWLGPYYQKEGVAGNDITRTNVPDIRISFRYETLLDELTNIFKEGMSTPR
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(811081..811189,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,852839..852862)
location: region:811081-852862:1
so has part: feature:811081-811189:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:852839-852862:1:exon

XP_034833971.1
type: Protein
SIO_000068: ncbiprotein

position:852862:1
position: 852862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811081-811189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:852839-852862:1:exon

LOC117990620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990620
product: AMP deaminase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 428 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034978078.1
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(820490..820581,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,860297..860433)
location: region:820490-860433:1
so has part: feature:820490-820581:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:860297-860433:1:exon

position:820490:1
position: 820490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820490-820581:1:exon

position:820581:1
position: 820581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860297-860433:1:exon

LOC117990620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 2 isoform X3
translation: MSSRGVQDGSRSPLIITDSFFDDARSESPTSAVGAEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAECGQSTRSFAGSDAGGVAGVFDETSRLRIDDDDLDVILPHFQRVAISGEDTSGVPLEDLQQASSYLVQALEIRKRYMDMSQQSFVTITTRFLRSMDADAPPNHTPGIKVPKSHIADHIVHPPFKDKDPWECPMPEPKGYTIKSDRGVFNLYRNTEKGEERVPYEYVDLTQYIQDMNIMCNMIADGPLKSFCYRRLSYLSSKFQLHVLLNELRELASQKAVPHRDFYNIRKVDTHIHAASCMNQKHLLRFIKKTLKNHADEVVTLHKGTPMTLKAVFQSMNLSTYDLTVDMLDVHADRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYMNGKYFARIIKEVASDLEESKYQNAELRLSIYGKSPGEWAKLAKWAIQYDVHSNNVRWLLQIPRLYDIFKSNKIMNNFQEFLSNIFQPLFEVTNDPNSNLELHKFLTHVIGFDSVDDESKPENPMLDADVRIPADWDDEENPPYAYYLYYMFANITVLNHFRKEQGLNTFVLRPHCGEAGPVQHLVCGFMLAENISHGLLLRKVPVLQYLYYLAQISIAMSPLSNNSLFLNYHRNPLPEFLARGLCITLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHEMKQYWLGPYYQKEGVAGNDITRTNVPDIRISFRYETLLDELTNIFKARHGFSLLQTCPAPPAPPVTPPPPNFNAPIVSLKRPSLV
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(820509..820581,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,860297..860416)
location: region:820509-860416:1
so has part: feature:820509-820581:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:860297-860416:1:exon

XP_034833969.1
type: Protein
SIO_000068: ncbiprotein

position:820509:1
position: 820509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820509-820581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860297-860416:1:exon

Trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: Trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(821232..821321)
location: region:821232-821321:-1
so has part: feature:821232-821321:-1:exon
subclass of: SO_0000663

117990935
type: Gene
SIO_000068: ncbigene

position:821232:-1
position: 821232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821321:-1
position: 821321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821232-821321:-1:exon

Trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2795564
gene: Trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(821286..821288),aa:Tyr,seq:gta)
SIO_010081: Trnay-gua
subclass of: SO_0000673
so part of: Trnay-gua
location: complement(join(821232..821267,821285..821321))
location: region:821232-821321:-1
so has part: feature:821285-821321:-1:exon
so has part: feature:821232-821267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821285-821321:-1:exon

position:821285:-1
position: 821285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821232-821267:-1:exon

position:821267:-1
position: 821267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990620
product: AMP deaminase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 428 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034978077.1
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(826006..826170,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,860297..860433)
location: region:826006-860433:1
so has part: feature:826006-826170:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:860297-860433:1:exon

position:826006:1
position: 826006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826006-826170:1:exon

position:826170:1
position: 826170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860297-860433:1:exon

LOC117990620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 2 isoform X2
translation: MYSFDKDLWHVRSRTTSNTQYDDKEQEEKRSESPTSAVGAEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAECGQSTRSFAGSDAGGVAGVFDETSRLRIDDDDLDVILPHFQRVAISGEDTSGVPLEDLQQASSYLVQALEIRKRYMDMSQQSFVTITTRFLRSMDADAPPNHTPGIKVPKSHIADHIVHPPFKDKDPWECPMPEPKGYTIKSDRGVFNLYRNTEKGEERVPYEYVDLTQYIQDMNIMCNMIADGPLKSFCYRRLSYLSSKFQLHVLLNELRELASQKAVPHRDFYNIRKVDTHIHAASCMNQKHLLRFIKKTLKNHADEVVTLHKGTPMTLKAVFQSMNLSTYDLTVDMLDVHADRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYMNGKYFARIIKEVASDLEESKYQNAELRLSIYGKSPGEWAKLAKWAIQYDVHSNNVRWLLQIPRLYDIFKSNKIMNNFQEFLSNIFQPLFEVTNDPNSNLELHKFLTHVIGFDSVDDESKPENPMLDADVRIPADWDDEENPPYAYYLYYMFANITVLNHFRKEQGLNTFVLRPHCGEAGPVQHLVCGFMLAENISHGLLLRKVPVLQYLYYLAQISIAMSPLSNNSLFLNYHRNPLPEFLARGLCITLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHEMKQYWLGPYYQKEGVAGNDITRTNVPDIRISFRYETLLDELTNIFKARHGFSLLQTCPAPPAPPVTPPPPNFNAPIVSLKRPSLV
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(826083..826170,829520..829661,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,860297..860416)
location: region:826083-860416:1
so has part: feature:826083-826170:1:exon
so has part: feature:829520-829661:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:860297-860416:1:exon

XP_034833968.1
type: Protein
SIO_000068: ncbiprotein

position:826083:1
position: 826083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826083-826170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829520-829661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860297-860416:1:exon

LOC117990620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990620
product: AMP deaminase 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 427 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978081.1
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(832292..832512,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,860297..860433)
location: region:832292-860433:1
so has part: feature:832292-832512:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:860297-860433:1:exon

position:832292:1
position: 832292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832292-832512:1:exon

position:832512:1
position: 832512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860297-860433:1:exon

LOC117990620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 2 isoform X6
translation: MFGSKIEFKKFTSIRAAECGQSTRSFAGSDAGGVAGVFDETSRLRIDDDDLDVILPHFQRVAISGEDTSGVPLEDLQQASSYLVQALEIRKRYMDMSQQSFVTITTRFLRSMDADAPPNHTPGIKVPKSHIADHIVHPPFKDKDPWECPMPEPKGYTIKSDRGVFNLYRNTEKGEERVPYEYVDLTQYIQDMNIMCNMIADGPLKSFCYRRLSYLSSKFQLHVLLNELRELASQKAVPHRDFYNIRKVDTHIHAASCMNQKHLLRFIKKTLKNHADEVVTLHKGTPMTLKAVFQSMNLSTYDLTVDMLDVHADRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYMNGKYFARIIKEVASDLEESKYQNAELRLSIYGKSPGEWAKLAKWAIQYDVHSNNVRWLLQIPRLYDIFKSNKIMNNFQEFLSNIFQPLFEVTNDPNSNLELHKFLTHVIGFDSVDDESKPENPMLDADVRIPADWDDEENPPYAYYLYYMFANITVLNHFRKEQGLNTFVLRPHCGEAGPVQHLVCGFMLAENISHGLLLRKVPVLQYLYYLAQISIAMSPLSNNSLFLNYHRNPLPEFLARGLCITLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHEMKQYWLGPYYQKEGVAGNDITRTNVPDIRISFRYETLLDELTNIFKARHGFSLLQTCPAPPAPPVTPPPPNFNAPIVSLKRPSLV
SIO_010081: LOC117990620
subclass of: SO_0000673
so part of: LOC117990620
location: join(832469..832512,833140..833305,833569..833755,834226..834439,835023..835148,845642..845735,845807..845911,846357..846488,846911..847074,847371..847494,847839..848005,849077..849197,849861..850034,850410..850520,851031..851168,860297..860416)
location: region:832469-860416:1
so has part: feature:832469-832512:1:exon
so has part: feature:833140-833305:1:exon
so has part: feature:833569-833755:1:exon
so has part: feature:834226-834439:1:exon
so has part: feature:835023-835148:1:exon
so has part: feature:845642-845735:1:exon
so has part: feature:845807-845911:1:exon
so has part: feature:846357-846488:1:exon
so has part: feature:846911-847074:1:exon
so has part: feature:847371-847494:1:exon
so has part: feature:847839-848005:1:exon
so has part: feature:849077-849197:1:exon
so has part: feature:849861-850034:1:exon
so has part: feature:850410-850520:1:exon
so has part: feature:851031-851168:1:exon
so has part: feature:860297-860416:1:exon

XP_034833972.1
type: Protein
SIO_000068: ncbiprotein

position:832469:1
position: 832469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832469-832512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:833140-833305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833569-833755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:834226-834439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835023-835148:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845642-845735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845807-845911:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846357-846488:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846911-847074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:847371-847494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847839-848005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:849077-849197:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:849861-850034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:850410-850520:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:851031-851168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860297-860416:1:exon

LOC117990623
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 862634..879483
location: region:862634-879483:1
so has part: feature:862634-879483:1:exon
subclass of: SO_0000010

117990623
type: Gene
SIO_000068: ncbigene

position:862634:1
position: 862634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879483:1
position: 879483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862634-879483:1:exon

LOC117990623
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990623
product: AMP deaminase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 480 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034978083.1
SIO_010081: LOC117990623
subclass of: SO_0000673
so part of: LOC117990623
location: join(862634..862770,863713..863851,864507..864705,865109..865213,865493..865573,866065..866269,866753..866878,871376..871574,872061..872192,872647..872810,873764..873887,873988..874154,877037..877157,877592..877765,878000..878110,878798..878935,879428..879483)
location: region:862634-879483:1
so has part: feature:862634-862770:1:exon
so has part: feature:863713-863851:1:exon
so has part: feature:864507-864705:1:exon
so has part: feature:865109-865213:1:exon
so has part: feature:865493-865573:1:exon
so has part: feature:866065-866269:1:exon
so has part: feature:866753-866878:1:exon
so has part: feature:871376-871574:1:exon
so has part: feature:872061-872192:1:exon
so has part: feature:872647-872810:1:exon
so has part: feature:873764-873887:1:exon
so has part: feature:873988-874154:1:exon
so has part: feature:877037-877157:1:exon
so has part: feature:877592-877765:1:exon
so has part: feature:878000-878110:1:exon
so has part: feature:878798-878935:1:exon
so has part: feature:879428-879483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:862634-862770:1:exon

position:862770:1
position: 862770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863713-863851:1:exon

position:863713:1
position: 863713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863851:1
position: 863851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864507-864705:1:exon

position:864507:1
position: 864507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864705:1
position: 864705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:865109-865213:1:exon

position:865109:1
position: 865109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865213:1
position: 865213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:865493-865573:1:exon

position:865493:1
position: 865493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865573:1
position: 865573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:866065-866269:1:exon

position:866065:1
position: 866065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866269:1
position: 866269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:866753-866878:1:exon

position:866753:1
position: 866753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866878:1
position: 866878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:871376-871574:1:exon

position:871376:1
position: 871376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871574:1
position: 871574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:872061-872192:1:exon

position:872061:1
position: 872061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872192:1
position: 872192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:872647-872810:1:exon

position:872647:1
position: 872647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872810:1
position: 872810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:873764-873887:1:exon

position:873764:1
position: 873764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873887:1
position: 873887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:873988-874154:1:exon

position:873988:1
position: 873988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874154:1
position: 874154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:877037-877157:1:exon

position:877037:1
position: 877037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877157:1
position: 877157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:877592-877765:1:exon

position:877592:1
position: 877592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877765:1
position: 877765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:878000-878110:1:exon

position:878000:1
position: 878000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878110:1
position: 878110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:878798-878935:1:exon

position:878798:1
position: 878798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878935:1
position: 878935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:879428-879483:1:exon

position:879428:1
position: 879428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990623
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 2-like
translation: MFGSKKDLKQWAKSRYETRQNISGATRTHIRGPGDAYGRQENAGNNAVNFQRLSVAGIHVTGVPLDDLERSASYLIDALTLRRDYMEMSEQSFPETLAYYITHRQSPPKEARPHDNTIDLSSAVLKFDEAAVEQSIRLRTCSSDDMQIQRGVDRSSWQNSETQFALPGTLSTIFPGHRGFCDSQEDLSANEHAAIQDPWACPFPPARQYVCRWRRGVVRVYRSEADAADHKPLPYRHLPFEKYVEDMAHLTTMISDGPLKSFCYRRLSYLSSKFKMHVLLNELHELALQKAVPHRDFYNVRKVDTHIHAASSMNQKHLLRFIKRTLRAQPEAVVALSGGAPMTLKSVFEEMHLDAYDLNVDILDVHADRNTFHRFDKFNAKYNPVGESRLREVFLKTDNYMNGTYFACIIKEVMSDYEENKYTFAEPRISIYCKNASEWGKLASWAIRHQVHSSHVRWLVQVPRLYDIYRINKLLKNFQEFLNNLFDPLFKVSVDPHTNPELHKFLTHVIGFDSVDDESKPENPNLSEHMRSPEEWDDEENPPYAYYLYYMYANMVTLNQLRKEQGLNTFVLRPHCGEAGPPVHLCAGFLLAENISHGLVLRKVPALQYIYYLTQIFIAMSPLSNNSLFLRYHRNPLPDYHARGLRVTLSTDDPLQFHYTKEPLMEEYSVAAQAWKLSACDMCELARNSVIMSGFPHEMKQRWVGAQYSRAGVAGNDITRTNVPDVRLEYRHETLLDELDYLFQKTISGQMP
SIO_010081: LOC117990623
subclass of: SO_0000673
so part of: LOC117990623
location: join(862724..862770,863713..863851,864507..864705,865109..865213,865493..865573,866065..866269,866753..866878,871376..871574,872061..872192,872647..872810,873764..873887,873988..874154,877037..877157,877592..877765,878000..878110,878798..878935,879428..879454)
location: region:862724-879454:1
so has part: feature:862724-862770:1:exon
so has part: feature:863713-863851:1:exon
so has part: feature:864507-864705:1:exon
so has part: feature:865109-865213:1:exon
so has part: feature:865493-865573:1:exon
so has part: feature:866065-866269:1:exon
so has part: feature:866753-866878:1:exon
so has part: feature:871376-871574:1:exon
so has part: feature:872061-872192:1:exon
so has part: feature:872647-872810:1:exon
so has part: feature:873764-873887:1:exon
so has part: feature:873988-874154:1:exon
so has part: feature:877037-877157:1:exon
so has part: feature:877592-877765:1:exon
so has part: feature:878000-878110:1:exon
so has part: feature:878798-878935:1:exon
so has part: feature:879428-879454:1:exon

XP_034833974.1
type: Protein
SIO_000068: ncbiprotein

position:862724:1
position: 862724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879454:1
position: 879454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862724-862770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863713-863851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864507-864705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865109-865213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865493-865573:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866065-866269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:866753-866878:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871376-871574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872061-872192:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872647-872810:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873764-873887:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:873988-874154:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877037-877157:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:877592-877765:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:878000-878110:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:878798-878935:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:879428-879454:1:exon

LOC117990622
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(880294..894026)
location: region:880294-894026:-1
so has part: feature:880294-894026:-1:exon
subclass of: SO_0000010

117990622
type: Gene
SIO_000068: ncbigene

position:880294:-1
position: 880294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894026:-1
position: 894026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880294-894026:-1:exon

LOC117990622
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990622
product: ribosome-releasing factor 2, mitochondrial
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978082.1
SIO_010081: LOC117990622
subclass of: SO_0000673
so part of: LOC117990622
location: complement(join(880294..880513,882241..882387,884001..884096,885305..885422,885984..886206,887218..887373,889109..889298,890332..890421,890872..891384,892341..892529,893097..893234,893532..893660,893845..894026))
location: region:880294-894026:-1
so has part: feature:893845-894026:-1:exon
so has part: feature:893532-893660:-1:exon
so has part: feature:893097-893234:-1:exon
so has part: feature:892341-892529:-1:exon
so has part: feature:890872-891384:-1:exon
so has part: feature:890332-890421:-1:exon
so has part: feature:889109-889298:-1:exon
so has part: feature:887218-887373:-1:exon
so has part: feature:885984-886206:-1:exon
so has part: feature:885305-885422:-1:exon
so has part: feature:884001-884096:-1:exon
so has part: feature:882241-882387:-1:exon
so has part: feature:880294-880513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893845-894026:-1:exon

position:893845:-1
position: 893845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893532-893660:-1:exon

position:893532:-1
position: 893532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893660:-1
position: 893660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:893097-893234:-1:exon

position:893097:-1
position: 893097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893234:-1
position: 893234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892341-892529:-1:exon

position:892341:-1
position: 892341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892529:-1
position: 892529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:890872-891384:-1:exon

position:890872:-1
position: 890872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891384:-1
position: 891384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:890332-890421:-1:exon

position:890332:-1
position: 890332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890421:-1
position: 890421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:889109-889298:-1:exon

position:889109:-1
position: 889109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889298:-1
position: 889298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:887218-887373:-1:exon

position:887218:-1
position: 887218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887373:-1
position: 887373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:885984-886206:-1:exon

position:885984:-1
position: 885984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886206:-1
position: 886206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:885305-885422:-1:exon

position:885305:-1
position: 885305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885422:-1
position: 885422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:884001-884096:-1:exon

position:884001:-1
position: 884001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884096:-1
position: 884096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:882241-882387:-1:exon

position:882241:-1
position: 882241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882387:-1
position: 882387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:880294-880513:-1:exon

position:880513:-1
position: 880513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990622
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990622
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ribosome-releasing factor 2, mitochondrial
translation: MKSFCIVNYYRKFLKNVQIRNYCSVERGKEKNDINKIRNIGILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGNTVTDYMEQERQRGITITSAAVSFPWQGYQINLIDTPGHIDFTMEVEQSLAVLDGAVVVLDGSAGVEAQTLTVWRQANGYKVPRILYLNKMDRSDSDARACARSVEDKLRVTPLLLHEPIYHEGKLIGLTDLITLEDIIWTKGRGQHYIKRKLSEKTDGKKMGVNLNEHRKIIDTLSSLDDKLADRIIQQESLDNLDYTDIIQAVRRCTVNMSLFPILCGSSYKNIGVQTLIDGVISYLPSPVERSGVFRGFGSDLSARAFKVQHDDQRGVLTFLRVYSGEITKGQKIYNLVRDKSEQTGLLYVALADEYRPVERVAGGNIAVVSALKATMSGDLITTNQAAANRAKEKLTSLLKDPSVCEGLVHPSAKHRLQTMDTDPTAEDIADVLLGIGNTIPEPVFLCSIEPPSATYQNALETALEELQREDPSLRVTTDEDTGQMVLAGMGELHLEIIKERIIREYKIDVELGPPQISYKETLIGTAKQTMTIDRKIGSAKQMAKVVMSAKTVKGIAQDKVLRLDKTADSAANLAHVHPRYMQAIRRGVDAALLHGPKLGCPLVDAQVTLHWFEVGRGTSDSVVAATVTQCLRKVFEEAESVLLEPVMFLELVCPESHSSRLLADLARRRADIQHIHLRQKNKVVECLAPLSELLGYSSSLRSLSSGLASFTMEFHSNRQMSPHDEEKAIRSVTGF
SIO_010081: LOC117990622
subclass of: SO_0000673
so part of: LOC117990622
location: complement(join(880352..880513,882241..882387,884001..884096,885305..885422,885984..886206,887218..887373,889109..889298,890332..890421,890872..891384,892341..892529,893097..893234,893532..893660,893845..893989))
location: region:880352-893989:-1
so has part: feature:893845-893989:-1:exon
so has part: feature:893532-893660:-1:exon
so has part: feature:893097-893234:-1:exon
so has part: feature:892341-892529:-1:exon
so has part: feature:890872-891384:-1:exon
so has part: feature:890332-890421:-1:exon
so has part: feature:889109-889298:-1:exon
so has part: feature:887218-887373:-1:exon
so has part: feature:885984-886206:-1:exon
so has part: feature:885305-885422:-1:exon
so has part: feature:884001-884096:-1:exon
so has part: feature:882241-882387:-1:exon
so has part: feature:880352-880513:-1:exon

XP_034833973.1
type: Protein
SIO_000068: ncbiprotein

position:880352:-1
position: 880352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893989:-1
position: 893989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893845-893989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893532-893660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893097-893234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892341-892529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890872-891384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890332-890421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889109-889298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:887218-887373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:885984-886206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:885305-885422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:884001-884096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882241-882387:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:880352-880513:-1:exon

LOC117990618
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990618
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 894225..932312
location: region:894225-932312:1
so has part: feature:894225-932312:1:exon
subclass of: SO_0000010

117990618
type: Gene
SIO_000068: ncbigene

position:894225:1
position: 894225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932312:1
position: 932312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894225-932312:1:exon

LOC117990618
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990618
product: 5'-3' exoribonuclease 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978074.1
SIO_010081: LOC117990618
subclass of: SO_0000673
so part of: LOC117990618
location: join(894225..894427,894512..894751,894950..895179,895955..896061,896759..896917,906814..906941,907442..907621,908122..908313,909458..909544,910327..910490,910927..911095,912012..912101,912499..912655,912977..913172,913770..913966,915221..915337,931873..932312)
location: region:894225-932312:1
so has part: feature:894225-894427:1:exon
so has part: feature:894512-894751:1:exon
so has part: feature:894950-895179:1:exon
so has part: feature:895955-896061:1:exon
so has part: feature:896759-896917:1:exon
so has part: feature:906814-906941:1:exon
so has part: feature:907442-907621:1:exon
so has part: feature:908122-908313:1:exon
so has part: feature:909458-909544:1:exon
so has part: feature:910327-910490:1:exon
so has part: feature:910927-911095:1:exon
so has part: feature:912012-912101:1:exon
so has part: feature:912499-912655:1:exon
so has part: feature:912977-913172:1:exon
so has part: feature:913770-913966:1:exon
so has part: feature:915221-915337:1:exon
so has part: feature:931873-932312:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:894225-894427:1:exon

position:894427:1
position: 894427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894512-894751:1:exon

position:894512:1
position: 894512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894751:1
position: 894751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:894950-895179:1:exon

position:894950:1
position: 894950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895179:1
position: 895179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:895955-896061:1:exon

position:895955:1
position: 895955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896061:1
position: 896061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:896759-896917:1:exon

position:896759:1
position: 896759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896917:1
position: 896917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:906814-906941:1:exon

position:906814:1
position: 906814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906941:1
position: 906941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:907442-907621:1:exon

position:907442:1
position: 907442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907621:1
position: 907621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:908122-908313:1:exon

position:908122:1
position: 908122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908313:1
position: 908313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:909458-909544:1:exon

position:909458:1
position: 909458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909544:1
position: 909544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:910327-910490:1:exon

position:910327:1
position: 910327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910490:1
position: 910490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:910927-911095:1:exon

position:910927:1
position: 910927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911095:1
position: 911095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:912012-912101:1:exon

position:912012:1
position: 912012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912101:1
position: 912101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:912499-912655:1:exon

position:912499:1
position: 912499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912655:1
position: 912655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:912977-913172:1:exon

position:912977:1
position: 912977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913172:1
position: 913172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:913770-913966:1:exon

position:913770:1
position: 913770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913966:1
position: 913966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:915221-915337:1:exon

position:915221:1
position: 915221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915337:1
position: 915337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:931873-932312:1:exon

position:931873:1
position: 931873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990618
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990618
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exoribonuclease 2 homolog
translation: MGVPAFFRWLSRKYPSVIVECIEQRPTDVDGQLIHVDSSLPNPNGIEFDNLYLDMNGIIHPCTHPEDKPPPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETQEKIEEVARIRSELQAKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIHDRLNSDPGWKGIKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTTPDVSLVRSDPAFGNQDSFIFVRLTVLREYLEKELQMPNLPFDYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKCVYKTKGWITDSGDVNLDRVQVIMDELGRVEDEIFRRRHQNEVSFKAREKAKKQQKVNFGLLEKTQFAPQRLGAGSRAVENPRQEAANIRLAGMQAVAAQEQADNRGRKRSATEAGLDEDEEEKHDEVRLWEEGFKERYYESKFEVASDNLEFRYRVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFVNIQGLSTKFEKGTLPFRPLEQLMGVFPAASSQHVPQPWAKLMSDPFSPIIDFYPIDFKIDLNGKKFAWQGVALLPFVDETRLFKALEPYYKELTQAEIYRNIKGHDRLYVAPSNKSYEFLLALYQEAGQELRKLIEDEQRYPFRSEGVRGDVMLSADNVCIGGQLASPVVGLAPVLGNHVVCVRFQDPQYPDDFIFPARRLHGATEPARVLKPGNLSHQENRNWRPQIGMVRSNTVASLETAGHRMLGHQLSRSGSYSNVPPPQQQHNRSQSFGPQRSGYVPHQGQGNQGYNRNYQSSDRYGSNQDRYGSNNDRYGSNQDRHGSNDRYGSNQGRYGSNQDRYQNQGYQGQNFRSYNQDQGSNQGYSQNKYPRNDQGRDQSQGNQRPNSGSSNRYQGNSTWR
SIO_010081: LOC117990618
subclass of: SO_0000673
so part of: LOC117990618
location: join(894353..894427,894512..894751,894950..895179,895955..896061,896759..896917,906814..906941,907442..907621,908122..908313,909458..909544,910327..910490,910927..911095,912012..912101,912499..912655,912977..913172,913770..913966,915221..915337,931873..932276)
location: region:894353-932276:1
so has part: feature:894353-894427:1:exon
so has part: feature:894512-894751:1:exon
so has part: feature:894950-895179:1:exon
so has part: feature:895955-896061:1:exon
so has part: feature:896759-896917:1:exon
so has part: feature:906814-906941:1:exon
so has part: feature:907442-907621:1:exon
so has part: feature:908122-908313:1:exon
so has part: feature:909458-909544:1:exon
so has part: feature:910327-910490:1:exon
so has part: feature:910927-911095:1:exon
so has part: feature:912012-912101:1:exon
so has part: feature:912499-912655:1:exon
so has part: feature:912977-913172:1:exon
so has part: feature:913770-913966:1:exon
so has part: feature:915221-915337:1:exon
so has part: feature:931873-932276:1:exon

XP_034833965.1
type: Protein
SIO_000068: ncbiprotein

position:894353:1
position: 894353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932276:1
position: 932276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894353-894427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894512-894751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894950-895179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895955-896061:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:896759-896917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906814-906941:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:907442-907621:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:908122-908313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909458-909544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910327-910490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910927-911095:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:912012-912101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912499-912655:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:912977-913172:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913770-913966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915221-915337:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:931873-932276:1:exon

LOC117990648
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(933918..954848)
location: region:933918-954848:-1
so has part: feature:933918-954848:-1:exon
subclass of: SO_0000011

117990648
type: Gene
SIO_000068: ncbigene

position:933918:-1
position: 933918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954848:-1
position: 954848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933918-954848:-1:exon

LOC117990648
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2795564
nc RNA class: lncRNA
gene: LOC117990648
product: uncharacterized LOC117990648
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004674793.1
SIO_010081: LOC117990648
subclass of: SO_0000673
so part of: LOC117990648
location: complement(join(933918..933929,940107..940109,954777..954848))
location: region:933918-954848:-1
so has part: feature:954777-954848:-1:exon
so has part: feature:940107-940109:-1:exon
so has part: feature:933918-933929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:954777-954848:-1:exon

position:954777:-1
position: 954777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:940107-940109:-1:exon

position:940107:-1
position: 940107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940109:-1
position: 940109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:933918-933929:-1:exon

position:933929:-1
position: 933929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990639
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(956065..1014884)
location: region:956065-1014884:-1
so has part: feature:956065-1014884:-1:exon
subclass of: SO_0000010

117990639
type: Gene
SIO_000068: ncbigene

position:956065:-1
position: 956065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014884:-1
position: 1014884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956065-1014884:-1:exon

LOC117990639
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990639
product: homeobox protein Nkx-2.4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034978111.1
SIO_010081: LOC117990639
subclass of: SO_0000673
so part of: LOC117990639
location: complement(join(956065..956573,960167..960253,977216..977311,981204..981352,1005547..1005746,1014648..1014884))
location: region:956065-1014884:-1
so has part: feature:1014648-1014884:-1:exon
so has part: feature:1005547-1005746:-1:exon
so has part: feature:981204-981352:-1:exon
so has part: feature:977216-977311:-1:exon
so has part: feature:960167-960253:-1:exon
so has part: feature:956065-956573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1014648-1014884:-1:exon

position:1014648:-1
position: 1014648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1005547-1005746:-1:exon

position:1005547:-1
position: 1005547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005746:-1
position: 1005746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:981204-981352:-1:exon

position:981204:-1
position: 981204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981352:-1
position: 981352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:977216-977311:-1:exon

position:977216:-1
position: 977216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977311:-1
position: 977311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:960167-960253:-1:exon

position:960167:-1
position: 960167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960253:-1
position: 960253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:956065-956573:-1:exon

position:956573:-1
position: 956573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990639
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-2.4-like
translation: MSAEGGGYSPCPAEALPELSAAELAMSLSPKSVLQQNLSQLQLQHSTPFSVTDILSPIEEYRKLELANNPPSPYRSNSSGSSINSPLGPAASCGMAGNPYAVPLYGGAPVQGYGCAPADLPHYGDMRGAGWYPASNDPRFAISRLMTSTSGGMGHVNQMGGLAACAGPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQSASSPRRVAVPVLVKDGKPCGSGESSSPAHSHCATPTSGYSAPQPSQAACSNPLVSSYRQPTAYQQQCSGYLPLQGRAW
SIO_010081: LOC117990639
subclass of: SO_0000673
so part of: LOC117990639
location: complement(join(956334..956573,960167..960253,977216..977311,981204..981352,1005547..1005746,1014648..1014871))
location: region:956334-1014871:-1
so has part: feature:1014648-1014871:-1:exon
so has part: feature:1005547-1005746:-1:exon
so has part: feature:981204-981352:-1:exon
so has part: feature:977216-977311:-1:exon
so has part: feature:960167-960253:-1:exon
so has part: feature:956334-956573:-1:exon

XP_034834002.1
type: Protein
SIO_000068: ncbiprotein

position:956334:-1
position: 956334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014871:-1
position: 1014871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014648-1014871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1005547-1005746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:981204-981352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977216-977311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960167-960253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956334-956573:-1:exon

LOC117990645
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 979189..984174
location: region:979189-984174:1
so has part: feature:979189-984174:1:exon
subclass of: SO_0000011

117990645
type: Gene
SIO_000068: ncbigene

position:979189:1
position: 979189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984174:1
position: 984174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979189-984174:1:exon

LOC117990645
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2795564
nc RNA class: lncRNA
gene: LOC117990645
product: uncharacterized LOC117990645
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004674791.1
SIO_010081: LOC117990645
subclass of: SO_0000673
so part of: LOC117990645
location: join(979189..979249,981602..981606,984163..984174)
location: region:979189-984174:1
so has part: feature:979189-979249:1:exon
so has part: feature:981602-981606:1:exon
so has part: feature:984163-984174:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979189-979249:1:exon

position:979249:1
position: 979249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:981602-981606:1:exon

position:981602:1
position: 981602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981606:1
position: 981606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:984163-984174:1:exon

position:984163:1
position: 984163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990638
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1019048..1035328
location: region:1019048-1035328:1
so has part: feature:1019048-1035328:1:exon
subclass of: SO_0000010

117990638
type: Gene
SIO_000068: ncbigene

position:1019048:1
position: 1019048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035328:1
position: 1035328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019048-1035328:1:exon

LOC117990638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990638
product: retinol dehydrogenase 13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978108.1
SIO_010081: LOC117990638
subclass of: SO_0000673
so part of: LOC117990638
location: join(1019048..1019213,1028659..1028737,1029874..1030000,1031072..1031208,1032045..1032201,1032778..1032946,1034142..1034346,1035177..1035328)
location: region:1019048-1035328:1
so has part: feature:1019048-1019213:1:exon
so has part: feature:1028659-1028737:1:exon
so has part: feature:1029874-1030000:1:exon
so has part: feature:1031072-1031208:1:exon
so has part: feature:1032045-1032201:1:exon
so has part: feature:1032778-1032946:1:exon
so has part: feature:1034142-1034346:1:exon
so has part: feature:1035177-1035328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019048-1019213:1:exon

position:1019213:1
position: 1019213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028659-1028737:1:exon

position:1028659:1
position: 1028659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028737:1
position: 1028737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1029874-1030000:1:exon

position:1029874:1
position: 1029874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030000:1
position: 1030000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1031072-1031208:1:exon

position:1031072:1
position: 1031072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031208:1
position: 1031208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1032045-1032201:1:exon

position:1032045:1
position: 1032045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032201:1
position: 1032201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1032778-1032946:1:exon

position:1032778:1
position: 1032778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032946:1
position: 1032946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1034142-1034346:1:exon

position:1034142:1
position: 1034142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034346:1
position: 1034346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1035177-1035328:1:exon

position:1035177:1
position: 1035177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990625
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1019176..1021522
location: region:1019176-1021522:1
so has part: feature:1019176-1021522:1:exon
subclass of: SO_0000010

117990625
type: Gene
SIO_000068: ncbigene

position:1019176:1
position: 1019176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021522:1
position: 1021522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019176-1021522:1:exon

LOC117990625
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990625
product: patj homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978086.1
SIO_010081: LOC117990625
subclass of: SO_0000673
so part of: LOC117990625
location: 1019176..1021522
location: region:1019176-1021522:1
so has part: feature:1019176-1021522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019176-1021522:1:exon

LOC117990625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patj homolog
translation: MVRKTMVLSTEWAQVEVVELTNDGNGLGFNLVGGRSTGVVIKYVLPGGIAEKDGRLQSGDHVLQVGSVNLRGFTSEQVAAVLRQAGPTVRLLVARPADPAAALRAPLPGTALVPTKLLGDPELLDRHLIETGYGAVYNLSQCFTDYINGQNDMQNLVAAVSIISDDPQQIPNHPIINAVSPTITITVPVELPPLPEVEIIHVDLNKNVYGLGITVAGYVCEKEELSGIFVKSIIEGSSAEQSGKIRLNDRIIEVDGTSLADKSNPQAVEILRNTGISVHFVLERYLRGPKFEHLQLAIFNEERPSSPSPSSTTLTWFPVPSQADNSITEIEPEPESNTTIDSGVLEVGENEDEPTQEELDKRFDAIFAVDTEEIKKKWESEFGSDKEIIVAEVNKLSGLGISLEGTVDVEGGQEVRPHHYIRSVLPEGPVGVQGLLAAGDELLEANEFRLHGLTHTEVVNILKQLPNRVRLVCARSNTESGPRPVINLAQDREGFEARKIISGSLNNLTTIVKAQSDSSINTSSTATLTNQSGSKKSRSLECVSGLAMWQSKEDIVELFKGDQGLGFSILDYQDPIDPNGTVIVIRSLVPGGVAEKNGEISPGDRVMSVNGASIKNATLDQAVQALKGAPRGIVKVGIARPLPSLESTKSKSTTTLNTKPS
SIO_010081: LOC117990625
subclass of: SO_0000673
so part of: LOC117990625
location: 1019402..1021387
location: region:1019402-1021387:1
so has part: feature:1019402-1021387:1:exon

XP_034833977.1
type: Protein
SIO_000068: ncbiprotein

position:1019402:1
position: 1019402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021387:1
position: 1021387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019402-1021387:1:exon

LOC117990647
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1024712..1042642
location: region:1024712-1042642:1
so has part: feature:1024712-1042642:1:exon
subclass of: SO_0000011

117990647
type: Gene
SIO_000068: ncbigene

position:1024712:1
position: 1024712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042642:1
position: 1042642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024712-1042642:1:exon

LOC117990647
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2795564
nc RNA class: lncRNA
gene: LOC117990647
product: uncharacterized LOC117990647
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004674792.1
SIO_010081: LOC117990647
subclass of: SO_0000673
so part of: LOC117990647
location: join(1024712..1024850,1027905..1027911,1042632..1042642)
location: region:1024712-1042642:1
so has part: feature:1024712-1024850:1:exon
so has part: feature:1027905-1027911:1:exon
so has part: feature:1042632-1042642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1024712-1024850:1:exon

position:1024850:1
position: 1024850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1027905-1027911:1:exon

position:1027905:1
position: 1027905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027911:1
position: 1027911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1042632-1042642:1:exon

position:1042632:1
position: 1042632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 13-like
translation: MWVPNLPVAILTGITAGAGALCLFKDIYGGVAFDKNVSAEGKTVVVTGATGGIGKQAAWEFAQRGAKVFMACRDMTKCEEARRDIVLGTNNKYVYCRPCDLASATSIREFVARFKSEEPYVHILVNNAGVMEPPQGVTKEGFETQLGTNHFGHFLLTELLLDTLKKSTPSRVIIVTCSAHQKGTIHKEDLNMSQKYDPVAAYNQSKLANVLFARELGRRMLDCDVAVTAVDPGFTDTDLTRHMAMMKSVTRFVVYPLFWPVMKKARTGAQTILHAALQPDLQKSKGDYYVDMKKTTPSELAQDYELAQWLWRVSDKWTKVDEHKAELAKALAA
SIO_010081: LOC117990638
subclass of: SO_0000673
so part of: LOC117990638
location: join(1028664..1028737,1029874..1030000,1031072..1031208,1032045..1032201,1032778..1032946,1034142..1034346,1035177..1035309)
location: region:1028664-1035309:1
so has part: feature:1028664-1028737:1:exon
so has part: feature:1029874-1030000:1:exon
so has part: feature:1031072-1031208:1:exon
so has part: feature:1032045-1032201:1:exon
so has part: feature:1032778-1032946:1:exon
so has part: feature:1034142-1034346:1:exon
so has part: feature:1035177-1035309:1:exon

XP_034833999.1
type: Protein
SIO_000068: ncbiprotein

position:1028664:1
position: 1028664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035309:1
position: 1035309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028664-1028737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029874-1030000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031072-1031208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032045-1032201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1032778-1032946:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034142-1034346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035177-1035309:1:exon

LOC117990617
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990617
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1037703..1067420)
location: region:1037703-1067420:-1
so has part: feature:1037703-1067420:-1:exon
subclass of: SO_0000010

117990617
type: Gene
SIO_000068: ncbigene

position:1037703:-1
position: 1037703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067420:-1
position: 1067420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037703-1067420:-1:exon

LOC117990617
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990617
product: DNA-directed RNA polymerase III subunit RPC1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034978073.1
SIO_010081: LOC117990617
subclass of: SO_0000673
so part of: LOC117990617
location: complement(join(1037703..1037935,1038738..1038938,1039240..1039333,1041519..1041731,1042244..1042362,1043143..1043361,1044589..1044778,1045986..1046090,1046939..1047111,1048144..1048301,1048884..1048997,1049969..1050048,1050768..1050887,1051706..1051819,1053085..1053220,1053846..1053946,1054571..1054692,1054846..1054956,1055984..1056095,1057299..1057423,1059018..1059215,1062540..1062677,1063851..1064028,1064382..1064536,1065004..1065345,1066086..1066235,1066759..1066894,1067278..1067420))
location: region:1037703-1067420:-1
so has part: feature:1067278-1067420:-1:exon
so has part: feature:1066759-1066894:-1:exon
so has part: feature:1066086-1066235:-1:exon
so has part: feature:1065004-1065345:-1:exon
so has part: feature:1064382-1064536:-1:exon
so has part: feature:1063851-1064028:-1:exon
so has part: feature:1062540-1062677:-1:exon
so has part: feature:1059018-1059215:-1:exon
so has part: feature:1057299-1057423:-1:exon
so has part: feature:1055984-1056095:-1:exon
so has part: feature:1054846-1054956:-1:exon
so has part: feature:1054571-1054692:-1:exon
so has part: feature:1053846-1053946:-1:exon
so has part: feature:1053085-1053220:-1:exon
so has part: feature:1051706-1051819:-1:exon
so has part: feature:1050768-1050887:-1:exon
so has part: feature:1049969-1050048:-1:exon
so has part: feature:1048884-1048997:-1:exon
so has part: feature:1048144-1048301:-1:exon
so has part: feature:1046939-1047111:-1:exon
so has part: feature:1045986-1046090:-1:exon
so has part: feature:1044589-1044778:-1:exon
so has part: feature:1043143-1043361:-1:exon
so has part: feature:1042244-1042362:-1:exon
so has part: feature:1041519-1041731:-1:exon
so has part: feature:1039240-1039333:-1:exon
so has part: feature:1038738-1038938:-1:exon
so has part: feature:1037703-1037935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1067278-1067420:-1:exon

position:1067278:-1
position: 1067278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066759-1066894:-1:exon

position:1066759:-1
position: 1066759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066894:-1
position: 1066894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066086-1066235:-1:exon

position:1066086:-1
position: 1066086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066235:-1
position: 1066235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1065004-1065345:-1:exon

position:1065004:-1
position: 1065004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065345:-1
position: 1065345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1064382-1064536:-1:exon

position:1064382:-1
position: 1064382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064536:-1
position: 1064536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1063851-1064028:-1:exon

position:1063851:-1
position: 1063851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064028:-1
position: 1064028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1062540-1062677:-1:exon

position:1062540:-1
position: 1062540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062677:-1
position: 1062677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1059018-1059215:-1:exon

position:1059018:-1
position: 1059018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059215:-1
position: 1059215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1057299-1057423:-1:exon

position:1057299:-1
position: 1057299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057423:-1
position: 1057423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1055984-1056095:-1:exon

position:1055984:-1
position: 1055984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056095:-1
position: 1056095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1054846-1054956:-1:exon

position:1054846:-1
position: 1054846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054956:-1
position: 1054956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1054571-1054692:-1:exon

position:1054571:-1
position: 1054571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054692:-1
position: 1054692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1053846-1053946:-1:exon

position:1053846:-1
position: 1053846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053946:-1
position: 1053946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1053085-1053220:-1:exon

position:1053085:-1
position: 1053085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053220:-1
position: 1053220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1051706-1051819:-1:exon

position:1051706:-1
position: 1051706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051819:-1
position: 1051819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1050768-1050887:-1:exon

position:1050768:-1
position: 1050768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050887:-1
position: 1050887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1049969-1050048:-1:exon

position:1049969:-1
position: 1049969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050048:-1
position: 1050048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1048884-1048997:-1:exon

position:1048884:-1
position: 1048884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048997:-1
position: 1048997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1048144-1048301:-1:exon

position:1048144:-1
position: 1048144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048301:-1
position: 1048301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1046939-1047111:-1:exon

position:1046939:-1
position: 1046939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047111:-1
position: 1047111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1045986-1046090:-1:exon

position:1045986:-1
position: 1045986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046090:-1
position: 1046090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1044589-1044778:-1:exon

position:1044589:-1
position: 1044589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044778:-1
position: 1044778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1043143-1043361:-1:exon

position:1043143:-1
position: 1043143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043361:-1
position: 1043361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1042244-1042362:-1:exon

position:1042244:-1
position: 1042244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042362:-1
position: 1042362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1041519-1041731:-1:exon

position:1041519:-1
position: 1041519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041731:-1
position: 1041731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1039240-1039333:-1:exon

position:1039240:-1
position: 1039240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039333:-1
position: 1039333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1038738-1038938:-1:exon

position:1038738:-1
position: 1038738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038938:-1
position: 1038938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1037703-1037935:-1:exon

position:1037935:-1
position: 1037935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990617
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990617
product: DNA-directed RNA polymerase III subunit RPC1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034978072.1
SIO_010081: LOC117990617
subclass of: SO_0000673
so part of: LOC117990617
location: complement(join(1037703..1037935,1038738..1038938,1039240..1039333,1041519..1041731,1042244..1042362,1043143..1043361,1044589..1044778,1045986..1046090,1046939..1047111,1048144..1048301,1048884..1048997,1049969..1050048,1050768..1050887,1051706..1051819,1053085..1053220,1053846..1053946,1054724..1054956,1055984..1056095,1057299..1057423,1059018..1059215,1062540..1062677,1063851..1064028,1064382..1064536,1065004..1065345,1066086..1066235,1066759..1066894,1067278..1067420))
location: region:1037703-1067420:-1
so has part: feature:1067278-1067420:-1:exon
so has part: feature:1066759-1066894:-1:exon
so has part: feature:1066086-1066235:-1:exon
so has part: feature:1065004-1065345:-1:exon
so has part: feature:1064382-1064536:-1:exon
so has part: feature:1063851-1064028:-1:exon
so has part: feature:1062540-1062677:-1:exon
so has part: feature:1059018-1059215:-1:exon
so has part: feature:1057299-1057423:-1:exon
so has part: feature:1055984-1056095:-1:exon
so has part: feature:1054724-1054956:-1:exon
so has part: feature:1053846-1053946:-1:exon
so has part: feature:1053085-1053220:-1:exon
so has part: feature:1051706-1051819:-1:exon
so has part: feature:1050768-1050887:-1:exon
so has part: feature:1049969-1050048:-1:exon
so has part: feature:1048884-1048997:-1:exon
so has part: feature:1048144-1048301:-1:exon
so has part: feature:1046939-1047111:-1:exon
so has part: feature:1045986-1046090:-1:exon
so has part: feature:1044589-1044778:-1:exon
so has part: feature:1043143-1043361:-1:exon
so has part: feature:1042244-1042362:-1:exon
so has part: feature:1041519-1041731:-1:exon
so has part: feature:1039240-1039333:-1:exon
so has part: feature:1038738-1038938:-1:exon
so has part: feature:1037703-1037935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1067278-1067420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066759-1066894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066086-1066235:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065004-1065345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064382-1064536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063851-1064028:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062540-1062677:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1059018-1059215:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057299-1057423:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1055984-1056095:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1054724-1054956:-1:exon

position:1054724:-1
position: 1054724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1053846-1053946:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1053085-1053220:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1051706-1051819:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1050768-1050887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1049969-1050048:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1048884-1048997:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1048144-1048301:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046939-1047111:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1045986-1046090:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1044589-1044778:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1043143-1043361:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1042244-1042362:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1041519-1041731:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1039240-1039333:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1038738-1038938:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1037703-1037935:-1:exon

LOC117990617
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990617
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC1 isoform X2
translation: MPKEQYRETYVGRKISHVTFNVDSASDIQQAAHIQVITKNLYAQDGQRVPASYGVLDRRMGTNQKDANCDTCGLGLAECVGHYGYIELALPVFHVGYFRSIITILQTICKNCAKVMLPETIKKSFRRKFMNPELSYLHKKNLRAAVLKKAKVGTKCPYCDALNGIVKKSPAGILKIIHDKYRTKKPTDAMVQKVLKEFNEAKESNKELATMINSGLIIELSPLEVLNLFRRIPDEDVPLLGMNVKSSRPEDLILTRLPVPPLCIRPSVASDIKAGTNEDDLTMKQSEILLINDVISRHVASGGKSELVQEDWDYLQLHAALYINSEMSGIPHSMQPKKPGRGLVQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRKLVCNGPDVHPGANYVQQRGFSHKKYLKYGNREKIAQELKCGDIVERHLVDGDVVLFNRQPSLHKLSIMCHRARVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKAEAQQLACCLLAGPDCSMRIDMPPAAILKPRVLWTGKQIFSLIMKPNKRCEVKANLETKGKNYAGNQDMCVQDSYVIIRNSELLCGSMDKSTLGSGTKNSIFYILLRDWGEEYAVRAMWRLARMASYYMMNRGFSFGISDVTPGKKLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKACFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFYSGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLHYDMTVRNATSEVVQFRYGSDGLDPSYMEDRDRPVGLGRVLAHVRALCQLRDEEPLDGDGIVVAAEETLALDDFKTCPQEFKAEMLTFLKKLANRVRNLRSKYAACGSIANQLERLTLTQLVRFIRVCHDKYQRSIIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASKNISTPIITAELTDPLDQEFARRVKGRVEKTTLGEITTYIDEVYLPHECFLLVRLDAERVRLLCLEVNVHSIVYSICTSKLKIKPGNVLAVSEWAIKVYAEPAKHGGWLNVALQQLARQLPSIVVKGLTRVSRAVIACDDSGSINRYKLCVEGDGLRDVIATYGVEGRKTSSNNILEVYQTLGIEAAATTIMSEIEAVMAGHGMAVDRRHVALLAAQMCARGEVLGITRYGLARMKESVLNLASFEKTADHLFDAAYYGQRDRIEGVSECIIVGVPAGIGTGVLQLLHKHDHYHKTQPPTLLFDNPEYHSSIWE
SIO_010081: LOC117990617
subclass of: SO_0000673
so part of: LOC117990617
location: complement(join(1037723..1037935,1038738..1038938,1039240..1039333,1041519..1041731,1042244..1042362,1043143..1043361,1044589..1044778,1045986..1046090,1046939..1047111,1048144..1048301,1048884..1048997,1049969..1050048,1050768..1050887,1051706..1051819,1053085..1053220,1053846..1053946,1054571..1054692,1054846..1054956,1055984..1056095,1057299..1057423,1059018..1059215,1062540..1062677,1063851..1064028,1064382..1064536,1065004..1065345,1066086..1066235,1066759..1066894,1067278..1067321))
location: region:1037723-1067321:-1
so has part: feature:1067278-1067321:-1:exon
so has part: feature:1066759-1066894:-1:exon
so has part: feature:1066086-1066235:-1:exon
so has part: feature:1065004-1065345:-1:exon
so has part: feature:1064382-1064536:-1:exon
so has part: feature:1063851-1064028:-1:exon
so has part: feature:1062540-1062677:-1:exon
so has part: feature:1059018-1059215:-1:exon
so has part: feature:1057299-1057423:-1:exon
so has part: feature:1055984-1056095:-1:exon
so has part: feature:1054846-1054956:-1:exon
so has part: feature:1054571-1054692:-1:exon
so has part: feature:1053846-1053946:-1:exon
so has part: feature:1053085-1053220:-1:exon
so has part: feature:1051706-1051819:-1:exon
so has part: feature:1050768-1050887:-1:exon
so has part: feature:1049969-1050048:-1:exon
so has part: feature:1048884-1048997:-1:exon
so has part: feature:1048144-1048301:-1:exon
so has part: feature:1046939-1047111:-1:exon
so has part: feature:1045986-1046090:-1:exon
so has part: feature:1044589-1044778:-1:exon
so has part: feature:1043143-1043361:-1:exon
so has part: feature:1042244-1042362:-1:exon
so has part: feature:1041519-1041731:-1:exon
so has part: feature:1039240-1039333:-1:exon
so has part: feature:1038738-1038938:-1:exon
so has part: feature:1037723-1037935:-1:exon

XP_034833964.1
type: Protein
SIO_000068: ncbiprotein

position:1037723:-1
position: 1037723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067321:-1
position: 1067321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067278-1067321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066759-1066894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066086-1066235:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065004-1065345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064382-1064536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063851-1064028:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062540-1062677:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1059018-1059215:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057299-1057423:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1055984-1056095:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1054846-1054956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1054571-1054692:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1053846-1053946:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1053085-1053220:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1051706-1051819:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1050768-1050887:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1049969-1050048:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1048884-1048997:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1048144-1048301:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1046939-1047111:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1045986-1046090:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1044589-1044778:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1043143-1043361:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1042244-1042362:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1041519-1041731:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1039240-1039333:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1038738-1038938:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1037723-1037935:-1:exon

LOC117990617
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990617
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC1 isoform X1
translation: MPKEQYRETYVGRKISHVTFNVDSASDIQQAAHIQVITKNLYAQDGQRVPASYGVLDRRMGTNQKDANCDTCGLGLAECVGHYGYIELALPVFHVGYFRSIITILQTICKNCAKVMLPETIKKSFRRKFMNPELSYLHKKNLRAAVLKKAKVGTKCPYCDALNGIVKKSPAGILKIIHDKYRTKKPTDAMVQKVLKEFNEAKESNKELATMINSGLIIELSPLEVLNLFRRIPDEDVPLLGMNVKSSRPEDLILTRLPVPPLCIRPSVASDIKAGTNEDDLTMKQSEILLINDVISRHVASGGKSELVQEDWDYLQLHAALYINSEMSGIPHSMQPKKPGRGLVQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRKLVCNGPDVHPGANYVQQRGFSHKKYLKYGNREKIAQELKCGDIVERHLVDGDVVLFNRQPSLHKLSIMCHRARVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKAEAQQLACCLLAGPDCSMRIDMPPPAILKPRVLWTGKQIFSLIMKPNKRCEVKANLETKGKNYAGNQDMCVQDSYVIIRNSELLCGSMDKSTLGSGTKNSIFYILLRDWGEEYAVRAMWRLARMASYYMMNRGFSFGISDVTPGKKLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKACFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFYSGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLHYDMTVRNATSEVVQFRYGSDGLDPSYMEDRDRPVGLGRVLAHVRALCQLRDEEPLDGDGIVVAAEETLALDDFKTCPQEFKAEMLTFLKKLANRVRNLRSKYAACGSIANQLERLTLTQLVRFIRVCHDKYQRSIIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASKNISTPIITAELTDPLDQEFARRVKGRVEKTTLGEITTYIDEVYLPHECFLLVRLDAERVRLLCLEVNVHSIVYSICTSKLKIKPGNVLAVSEWAIKVYAEPAKHGGWLNVALQQLARQLPSIVVKGLTRVSRAVIACDDSGSINRYKLCVEGDGLRDVIATYGVEGRKTSSNNILEVYQTLGIEAAATTIMSEIEAVMAGHGMAVDRRHVALLAAQMCARGEVLGITRYGLARMKESVLNLASFEKTADHLFDAAYYGQRDRIEGVSECIIVGVPAGIGTGVLQLLHKHDHYHKTQPPTLLFDNPEYHSSIWE
SIO_010081: LOC117990617
subclass of: SO_0000673
so part of: LOC117990617
location: complement(join(1037723..1037935,1038738..1038938,1039240..1039333,1041519..1041731,1042244..1042362,1043143..1043361,1044589..1044778,1045986..1046090,1046939..1047111,1048144..1048301,1048884..1048997,1049969..1050048,1050768..1050887,1051706..1051819,1053085..1053220,1053846..1053946,1054724..1054956,1055984..1056095,1057299..1057423,1059018..1059215,1062540..1062677,1063851..1064028,1064382..1064536,1065004..1065345,1066086..1066235,1066759..1066894,1067278..1067321))
location: region:1037723-1067321:-1
so has part: feature:1067278-1067321:-1:exon
so has part: feature:1066759-1066894:-1:exon
so has part: feature:1066086-1066235:-1:exon
so has part: feature:1065004-1065345:-1:exon
so has part: feature:1064382-1064536:-1:exon
so has part: feature:1063851-1064028:-1:exon
so has part: feature:1062540-1062677:-1:exon
so has part: feature:1059018-1059215:-1:exon
so has part: feature:1057299-1057423:-1:exon
so has part: feature:1055984-1056095:-1:exon
so has part: feature:1054724-1054956:-1:exon
so has part: feature:1053846-1053946:-1:exon
so has part: feature:1053085-1053220:-1:exon
so has part: feature:1051706-1051819:-1:exon
so has part: feature:1050768-1050887:-1:exon
so has part: feature:1049969-1050048:-1:exon
so has part: feature:1048884-1048997:-1:exon
so has part: feature:1048144-1048301:-1:exon
so has part: feature:1046939-1047111:-1:exon
so has part: feature:1045986-1046090:-1:exon
so has part: feature:1044589-1044778:-1:exon
so has part: feature:1043143-1043361:-1:exon
so has part: feature:1042244-1042362:-1:exon
so has part: feature:1041519-1041731:-1:exon
so has part: feature:1039240-1039333:-1:exon
so has part: feature:1038738-1038938:-1:exon
so has part: feature:1037723-1037935:-1:exon

XP_034833963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1067278-1067321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066759-1066894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066086-1066235:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065004-1065345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064382-1064536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063851-1064028:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062540-1062677:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1059018-1059215:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057299-1057423:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1055984-1056095:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1054724-1054956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1053846-1053946:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1053085-1053220:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1051706-1051819:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1050768-1050887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1049969-1050048:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1048884-1048997:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1048144-1048301:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046939-1047111:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1045986-1046090:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1044589-1044778:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1043143-1043361:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1042244-1042362:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1041519-1041731:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1039240-1039333:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1038738-1038938:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1037723-1037935:-1:exon

LOC117990713
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1067888..1097772
location: region:1067888-1097772:1
so has part: feature:1067888-1097772:1:exon
subclass of: SO_0000010

117990713
type: Gene
SIO_000068: ncbigene

position:1067888:1
position: 1067888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097772:1
position: 1097772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067888-1097772:1:exon

LOC117990713
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990713
product: bromodomain adjacent to zinc finger domain protein 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978196.1
SIO_010081: LOC117990713
subclass of: SO_0000673
so part of: LOC117990713
location: join(1067888..1068219,1068415..1068744,1070989..1071178,1072031..1072244,1073096..1073295,1073701..1073986,1074328..1074469,1075493..1075662,1075891..1076015,1076355..1076589,1077411..1077587,1078056..1078234,1078945..1079133,1079985..1080149,1081234..1081366,1082146..1082352,1083991..1084265,1087108..1087220,1087602..1087777,1089606..1089686,1091466..1091574,1092385..1092449,1094353..1094504,1095859..1096022,1097587..1097772)
location: region:1067888-1097772:1
so has part: feature:1067888-1068219:1:exon
so has part: feature:1068415-1068744:1:exon
so has part: feature:1070989-1071178:1:exon
so has part: feature:1072031-1072244:1:exon
so has part: feature:1073096-1073295:1:exon
so has part: feature:1073701-1073986:1:exon
so has part: feature:1074328-1074469:1:exon
so has part: feature:1075493-1075662:1:exon
so has part: feature:1075891-1076015:1:exon
so has part: feature:1076355-1076589:1:exon
so has part: feature:1077411-1077587:1:exon
so has part: feature:1078056-1078234:1:exon
so has part: feature:1078945-1079133:1:exon
so has part: feature:1079985-1080149:1:exon
so has part: feature:1081234-1081366:1:exon
so has part: feature:1082146-1082352:1:exon
so has part: feature:1083991-1084265:1:exon
so has part: feature:1087108-1087220:1:exon
so has part: feature:1087602-1087777:1:exon
so has part: feature:1089606-1089686:1:exon
so has part: feature:1091466-1091574:1:exon
so has part: feature:1092385-1092449:1:exon
so has part: feature:1094353-1094504:1:exon
so has part: feature:1095859-1096022:1:exon
so has part: feature:1097587-1097772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1067888-1068219:1:exon

position:1068219:1
position: 1068219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068415-1068744:1:exon

position:1068415:1
position: 1068415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068744:1
position: 1068744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070989-1071178:1:exon

position:1070989:1
position: 1070989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071178:1
position: 1071178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1072031-1072244:1:exon

position:1072031:1
position: 1072031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072244:1
position: 1072244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1073096-1073295:1:exon

position:1073096:1
position: 1073096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073295:1
position: 1073295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1073701-1073986:1:exon

position:1073701:1
position: 1073701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073986:1
position: 1073986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1074328-1074469:1:exon

position:1074328:1
position: 1074328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074469:1
position: 1074469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1075493-1075662:1:exon

position:1075493:1
position: 1075493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075662:1
position: 1075662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1075891-1076015:1:exon

position:1075891:1
position: 1075891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076015:1
position: 1076015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1076355-1076589:1:exon

position:1076355:1
position: 1076355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076589:1
position: 1076589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1077411-1077587:1:exon

position:1077411:1
position: 1077411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077587:1
position: 1077587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1078056-1078234:1:exon

position:1078056:1
position: 1078056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078234:1
position: 1078234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1078945-1079133:1:exon

position:1078945:1
position: 1078945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079133:1
position: 1079133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1079985-1080149:1:exon

position:1079985:1
position: 1079985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080149:1
position: 1080149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1081234-1081366:1:exon

position:1081234:1
position: 1081234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081366:1
position: 1081366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1082146-1082352:1:exon

position:1082146:1
position: 1082146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082352:1
position: 1082352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1083991-1084265:1:exon

position:1083991:1
position: 1083991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084265:1
position: 1084265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1087108-1087220:1:exon

position:1087108:1
position: 1087108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087220:1
position: 1087220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1087602-1087777:1:exon

position:1087602:1
position: 1087602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087777:1
position: 1087777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1089606-1089686:1:exon

position:1089606:1
position: 1089606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089686:1
position: 1089686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1091466-1091574:1:exon

position:1091466:1
position: 1091466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091574:1
position: 1091574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1092385-1092449:1:exon

position:1092385:1
position: 1092385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092449:1
position: 1092449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1094353-1094504:1:exon

position:1094353:1
position: 1094353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094504:1
position: 1094504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1095859-1096022:1:exon

position:1095859:1
position: 1095859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096022:1
position: 1096022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1097587-1097772:1:exon

position:1097587:1
position: 1097587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990713
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain adjacent to zinc finger domain protein 1A
translation: MPLLKRKAFEKASVSEYLRDDDEVFHCEITDEIFKDYEEYCERIILVNSMVWTCEMTGKNNLTYAEALESEKAARRSLKDFPMELRIPILYLATKTKRCSFAEMSEDVFNFVRERFFVGETVEACLEGDTWCEAHVLSVTAQKRHPDNKAMLPASAYCYEVEQFADDPAEQGQMGTAPHDRVRRRKGIYTRDKNRLFLKQFVAPGNVIGIKKAALEKYNIAKVNFDQIFTGSPPEFPSSKKLIKSSMSPPKSRLSGKPGSATKPNKGQVSMDKFVKKTEKTEAKPKAPINPAARKTQQDLADKMRKAEELLRQRKEEEKLKKKEKNARVMAFMKEWQKVKDDQELEDHKMLPKATVVEVEGISHKHFGDFLSVLEFVQNFSELLKVRDVFHNELDFETFRKALTAKEHAWMFSELVQMFLTTIFSLQEDEAEEYNEKKGIQESVENEQIEGPASTMHAIELATKAGKWAQTYLGTSLSKLPLDPTTVSEVLRLHLLSSGGAAGARCAAWRHHQRGGYSSADDPALRLRATTPGVLRRLRSHHLADLPMDDKFIILQCLMNQILSYATVRDQVEEKIEEYKNLKQALRTLQISERKREPQLSAARVELRKETAQKKEELKLTGDKAKQADEQLTVAMEKLKKDSEVKKLDYEKKMKELQVQLFDYTTYVGSDRAFRRYWISKRVAGLFVEAGVEPRGPCRHKPLPPPPAPTNDVMAYVTELYHSEKEQAGSDKENESAANSRSGPPKKPLTNLNGLTHKLNGVDSSTQHCRDLLLCTADVNTCYVHGKEADYRPQWWVYNTEEQIETLIEALNKRGLREGELRQNLELERGNIVEYVKKCPLQYLTPTVALPQPHIAPTTRRRIQPSLRVPPDCSLSEALELSLRDHILELEEKIFHGCLGALKVKDREAWRGTIMLRGYDKQADYLSWGPSRQFRDDYHQPDGQLRLPHDIDKSEIETVAENKYRDPGHCLEVTKVNGVKSEPEEDSPAAKPDVVRDLASALLQVAQSIHQKYLKRPLGLDEKERKDREARNKPLDLEALERWEVSLMECRSFAALVLHLLALDSSVSWAASVLNASCRLCRRRTDPDNMLLCDGCNKGHHLYCLKPKLAKVPEGDWFCEQCKPKEKTPRKRRKLYTEEQPEEELDDSADSFDVDEALSLCGACGSGGRLAAQCRACAARFHEECAAPRQRLSRRFLCEACANPARDRRRCAATAMSNIQQYARAINSRSISSDSEDSEYNTTLVSIKAKKSKSKEPSPMQNGTAKRGRKSKEVLNGSTTRRSKTLTNGVHEETDKNRTGKKRGRRETAEEVLHTEALAQLLREAMKHKDSWPFNEPVTVEEVPDYFKVIDQPMDLTTIKSKLESSQYDTDEALLADVALVFANCYTYNKDTHLVAKAGMRLEKYINKRCSELNLPSLPDTSVEEEPTETQEPRPKAKRAKHD
SIO_010081: LOC117990713
subclass of: SO_0000673
so part of: LOC117990713
location: join(1068107..1068219,1068415..1068744,1070989..1071178,1072031..1072244,1073096..1073295,1073701..1073986,1074328..1074469,1075493..1075662,1075891..1076015,1076355..1076589,1077411..1077587,1078056..1078234,1078945..1079133,1079985..1080149,1081234..1081366,1082146..1082352,1083991..1084265,1087108..1087220,1087602..1087777,1089606..1089686,1091466..1091574,1092385..1092449,1094353..1094504,1095859..1096022,1097587..1097728)
location: region:1068107-1097728:1
so has part: feature:1068107-1068219:1:exon
so has part: feature:1068415-1068744:1:exon
so has part: feature:1070989-1071178:1:exon
so has part: feature:1072031-1072244:1:exon
so has part: feature:1073096-1073295:1:exon
so has part: feature:1073701-1073986:1:exon
so has part: feature:1074328-1074469:1:exon
so has part: feature:1075493-1075662:1:exon
so has part: feature:1075891-1076015:1:exon
so has part: feature:1076355-1076589:1:exon
so has part: feature:1077411-1077587:1:exon
so has part: feature:1078056-1078234:1:exon
so has part: feature:1078945-1079133:1:exon
so has part: feature:1079985-1080149:1:exon
so has part: feature:1081234-1081366:1:exon
so has part: feature:1082146-1082352:1:exon
so has part: feature:1083991-1084265:1:exon
so has part: feature:1087108-1087220:1:exon
so has part: feature:1087602-1087777:1:exon
so has part: feature:1089606-1089686:1:exon
so has part: feature:1091466-1091574:1:exon
so has part: feature:1092385-1092449:1:exon
so has part: feature:1094353-1094504:1:exon
so has part: feature:1095859-1096022:1:exon
so has part: feature:1097587-1097728:1:exon

XP_034834087.1
type: Protein
SIO_000068: ncbiprotein

position:1068107:1
position: 1068107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097728:1
position: 1097728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068107-1068219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068415-1068744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070989-1071178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072031-1072244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1073096-1073295:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073701-1073986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074328-1074469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075493-1075662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075891-1076015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076355-1076589:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1077411-1077587:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1078056-1078234:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1078945-1079133:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1079985-1080149:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1081234-1081366:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1082146-1082352:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1083991-1084265:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087108-1087220:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1087602-1087777:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1089606-1089686:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1091466-1091574:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1092385-1092449:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1094353-1094504:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1095859-1096022:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1097587-1097728:1:exon

LOC117990717
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990717
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1100766..1102342)
location: region:1100766-1102342:-1
so has part: feature:1100766-1102342:-1:exon
subclass of: SO_0000010

117990717
type: Gene
SIO_000068: ncbigene

position:1100766:-1
position: 1100766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102342:-1
position: 1102342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100766-1102342:-1:exon

LOC117990717
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990717
product: uncharacterized LOC117990717
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034978202.1
SIO_010081: LOC117990717
subclass of: SO_0000673
so part of: LOC117990717
location: complement(join(1100766..1100895,1101961..1102136,1102313..1102342))
location: region:1100766-1102342:-1
so has part: feature:1102313-1102342:-1:exon
so has part: feature:1101961-1102136:-1:exon
so has part: feature:1100766-1100895:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102313-1102342:-1:exon

position:1102313:-1
position: 1102313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1101961-1102136:-1:exon

position:1101961:-1
position: 1101961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102136:-1
position: 1102136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1100766-1100895:-1:exon

position:1100895:-1
position: 1100895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990717
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990717
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117990717
translation: MSDSPARPMKYPYTISAKIAQFPFKYYVQNQWIWRYWMIGIAVATPVFYKIHKLANSPENVSKWAEMRKKEAASHH
SIO_010081: LOC117990717
subclass of: SO_0000673
so part of: LOC117990717
location: complement(join(1100828..1100895,1101961..1102123))
location: region:1100828-1102123:-1
so has part: feature:1101961-1102123:-1:exon
so has part: feature:1100828-1100895:-1:exon

XP_034834093.1
type: Protein
SIO_000068: ncbiprotein

position:1100828:-1
position: 1100828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102123:-1
position: 1102123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101961-1102123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1100828-1100895:-1:exon

LOC117990794
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1102967..1145329
location: region:1102967-1145329:1
so has part: feature:1102967-1145329:1:exon
subclass of: SO_0000010

117990794
type: Gene
SIO_000068: ncbigene

position:1102967:1
position: 1102967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145329:1
position: 1145329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102967-1145329:1:exon

LOC117990794
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990794
product: kinesin-like protein Klp98A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978285.1
SIO_010081: LOC117990794
subclass of: SO_0000673
so part of: LOC117990794
location: join(1102967..1103111,1104880..1104949,1105303..1105413,1110488..1110604,1112218..1112457,1112838..1113013,1113464..1113588,1114063..1114175,1114916..1115086,1115969..1116208,1126261..1126450,1127922..1128093,1128862..1129018,1129711..1129884,1132491..1132616,1133047..1133166,1134360..1134507,1136681..1136813,1138321..1138552,1139021..1139108,1140169..1140317,1140850..1141064,1142007..1142220,1142849..1142888,1143535..1143701,1144305..1144493,1145249..1145329)
location: region:1102967-1145329:1
so has part: feature:1102967-1103111:1:exon
so has part: feature:1104880-1104949:1:exon
so has part: feature:1105303-1105413:1:exon
so has part: feature:1110488-1110604:1:exon
so has part: feature:1112218-1112457:1:exon
so has part: feature:1112838-1113013:1:exon
so has part: feature:1113464-1113588:1:exon
so has part: feature:1114063-1114175:1:exon
so has part: feature:1114916-1115086:1:exon
so has part: feature:1115969-1116208:1:exon
so has part: feature:1126261-1126450:1:exon
so has part: feature:1127922-1128093:1:exon
so has part: feature:1128862-1129018:1:exon
so has part: feature:1129711-1129884:1:exon
so has part: feature:1132491-1132616:1:exon
so has part: feature:1133047-1133166:1:exon
so has part: feature:1134360-1134507:1:exon
so has part: feature:1136681-1136813:1:exon
so has part: feature:1138321-1138552:1:exon
so has part: feature:1139021-1139108:1:exon
so has part: feature:1140169-1140317:1:exon
so has part: feature:1140850-1141064:1:exon
so has part: feature:1142007-1142220:1:exon
so has part: feature:1142849-1142888:1:exon
so has part: feature:1143535-1143701:1:exon
so has part: feature:1144305-1144493:1:exon
so has part: feature:1145249-1145329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102967-1103111:1:exon

position:1103111:1
position: 1103111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104880-1104949:1:exon

position:1104880:1
position: 1104880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104949:1
position: 1104949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1105303-1105413:1:exon

position:1105303:1
position: 1105303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105413:1
position: 1105413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1110488-1110604:1:exon

position:1110488:1
position: 1110488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110604:1
position: 1110604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1112218-1112457:1:exon

position:1112218:1
position: 1112218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112457:1
position: 1112457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1112838-1113013:1:exon

position:1112838:1
position: 1112838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113013:1
position: 1113013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1113464-1113588:1:exon

position:1113464:1
position: 1113464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113588:1
position: 1113588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1114063-1114175:1:exon

position:1114063:1
position: 1114063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114175:1
position: 1114175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1114916-1115086:1:exon

position:1114916:1
position: 1114916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115086:1
position: 1115086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1115969-1116208:1:exon

position:1115969:1
position: 1115969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116208:1
position: 1116208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1126261-1126450:1:exon

position:1126261:1
position: 1126261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126450:1
position: 1126450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1127922-1128093:1:exon

position:1127922:1
position: 1127922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128093:1
position: 1128093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1128862-1129018:1:exon

position:1128862:1
position: 1128862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129018:1
position: 1129018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1129711-1129884:1:exon

position:1129711:1
position: 1129711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129884:1
position: 1129884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1132491-1132616:1:exon

position:1132491:1
position: 1132491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132616:1
position: 1132616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1133047-1133166:1:exon

position:1133047:1
position: 1133047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133166:1
position: 1133166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1134360-1134507:1:exon

position:1134360:1
position: 1134360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134507:1
position: 1134507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1136681-1136813:1:exon

position:1136681:1
position: 1136681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136813:1
position: 1136813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1138321-1138552:1:exon

position:1138321:1
position: 1138321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138552:1
position: 1138552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1139021-1139108:1:exon

position:1139021:1
position: 1139021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139108:1
position: 1139108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1140169-1140317:1:exon

position:1140169:1
position: 1140169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140317:1
position: 1140317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1140850-1141064:1:exon

position:1140850:1
position: 1140850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141064:1
position: 1141064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1142007-1142220:1:exon

position:1142007:1
position: 1142007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142220:1
position: 1142220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1142849-1142888:1:exon

position:1142849:1
position: 1142849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142888:1
position: 1142888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1143535-1143701:1:exon

position:1143535:1
position: 1143535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143701:1
position: 1143701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1144305-1144493:1:exon

position:1144305:1
position: 1144305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144493:1
position: 1144493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1145249-1145329:1:exon

position:1145249:1
position: 1145249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990794
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein Klp98A
translation: MASVKVAVRVRPFNQRERDMNAKLIVQMEGKKTRLLTVKNSKEQNDGSREKFKDFTFDHSYWSYDSADAQYASQEQVFADLGLDVIDSAFEGYNACVFAYGQTGSGKTFTMMGSPESQGLIPRICRQLFSRVAAGKESGASYRTEVSYLEIYNERVKDLLSTDAGHSLRVREHPKLGPYVQDLSRHLVSDYDDIQECMHRGNLHRTTASTQMNDVSSRSHAIFTITFVQASYLRHNNMPSETVSKVHLVDLAGSERADATGATGQRLVEGAHINKSLVTLGSVISALAEATQVVDSRNPKNTKKVFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADCNYGETLSTLRYANRAKNIINKPTINEDPNVKLIRELREEIEKLRAQISHNTDPIEAEPAVLATLQRKEAQEKVLTEKWTEKWRETQQILQEQKALGLRKSGLGVVLDSDMPHLVGIDDNLLSTGVTLYHLKEGETLIGSEEFTPTPDIVLTGAGVLPLHCRVTLREGVATITPASGAQCWLNTVLLDKPAKLSQGCILLLGRTNMFRYNDPAEAAKLRQEGASAMNLSRLSLLSWSTTDLAASTENLNTTLSDLESEIRCERIEAQRAELERERQQFELQQEERQRRWHQEREQLLQAQRQLDEERSAMEKEYAAACRRLSGDWRALERGWTLRRRALRCRQRELSARVTRHAAAVRDVIDTIEKEETQIADVRRRLGGKQGELELFVREKIKELVESGCHVDESLTPSPDSPQSETSTESLMHLLQQCEPNTAKSIKETVERHKKELESLEQELQGRVASVAAHRVKIERLQQELAVLAARERGITRALADGEGESEMSPAEGVKRSKSELVLRCHTDVPEPLSADEREHFRAKRLSLSLSLDPLPSPNSTLNSPDTFHTATSSPKLPSSSSVPTPSTTETSALPSDPAPIPQFRLGVAPDDSDDMSSTEDYHKPRIVEGQSSSSVERSPEERQQRTKYRRRIGESKNRRQVTEAEALRAMQRLCSRIASQKMLVISSLENDCSKEELNRQIAVLQELQKKYVRLEMALQYSFFDNQPNKRTIMVTPIQETPSLTLSESDMQVSNEPAPASETHNGHFEDPLLSRLKETEVEASDNVSTSNDELPSEQSWPDPLRALCPPPSPHRTDHDHDHDHDHDHDHDYNNIHQNHRQSVQHPDYSAEGLMHPIDFADVVSVPGWVTRGAGARTHHEYEVRVRLPNASWALLRRYRRFRDLYLAARASYGEKVAAIPFPARTLWSTEALARSRRPQLETFLRRLLTVCSSDRRCPLYSSPLTRESLVAFSPFFRKGVFESGKCGTG
SIO_010081: LOC117990794
subclass of: SO_0000673
so part of: LOC117990794
location: join(1103065..1103111,1104880..1104949,1105303..1105413,1110488..1110604,1112218..1112457,1112838..1113013,1113464..1113588,1114063..1114175,1114916..1115086,1115969..1116208,1126261..1126450,1127922..1128093,1128862..1129018,1129711..1129884,1132491..1132616,1133047..1133166,1134360..1134507,1136681..1136813,1138321..1138552,1139021..1139108,1140169..1140317,1140850..1141064,1142007..1142220,1142849..1142888,1143535..1143701,1144305..1144493,1145249..1145284)
location: region:1103065-1145284:1
so has part: feature:1103065-1103111:1:exon
so has part: feature:1104880-1104949:1:exon
so has part: feature:1105303-1105413:1:exon
so has part: feature:1110488-1110604:1:exon
so has part: feature:1112218-1112457:1:exon
so has part: feature:1112838-1113013:1:exon
so has part: feature:1113464-1113588:1:exon
so has part: feature:1114063-1114175:1:exon
so has part: feature:1114916-1115086:1:exon
so has part: feature:1115969-1116208:1:exon
so has part: feature:1126261-1126450:1:exon
so has part: feature:1127922-1128093:1:exon
so has part: feature:1128862-1129018:1:exon
so has part: feature:1129711-1129884:1:exon
so has part: feature:1132491-1132616:1:exon
so has part: feature:1133047-1133166:1:exon
so has part: feature:1134360-1134507:1:exon
so has part: feature:1136681-1136813:1:exon
so has part: feature:1138321-1138552:1:exon
so has part: feature:1139021-1139108:1:exon
so has part: feature:1140169-1140317:1:exon
so has part: feature:1140850-1141064:1:exon
so has part: feature:1142007-1142220:1:exon
so has part: feature:1142849-1142888:1:exon
so has part: feature:1143535-1143701:1:exon
so has part: feature:1144305-1144493:1:exon
so has part: feature:1145249-1145284:1:exon

XP_034834176.1
type: Protein
SIO_000068: ncbiprotein

position:1103065:1
position: 1103065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145284:1
position: 1145284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103065-1103111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104880-1104949:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1105303-1105413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1110488-1110604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1112218-1112457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1112838-1113013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1113464-1113588:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1114063-1114175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1114916-1115086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115969-1116208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1126261-1126450:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1127922-1128093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1128862-1129018:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1129711-1129884:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1132491-1132616:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1133047-1133166:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1134360-1134507:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1136681-1136813:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1138321-1138552:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1139021-1139108:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1140169-1140317:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1140850-1141064:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1142007-1142220:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1142849-1142888:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1143535-1143701:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1144305-1144493:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1145249-1145284:1:exon

LOC117990718
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1150482..1162257
location: region:1150482-1162257:1
so has part: feature:1150482-1162257:1:exon
subclass of: SO_0000011

117990718
type: Gene
SIO_000068: ncbigene

position:1150482:1
position: 1150482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162257:1
position: 1162257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150482-1162257:1:exon

LOC117990718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2795564
nc RNA class: lncRNA
gene: LOC117990718
product: uncharacterized LOC117990718
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004674801.1
SIO_010081: LOC117990718
subclass of: SO_0000673
so part of: LOC117990718
location: join(1150482..1150617,1158562..1158565,1162243..1162257)
location: region:1150482-1162257:1
so has part: feature:1150482-1150617:1:exon
so has part: feature:1158562-1158565:1:exon
so has part: feature:1162243-1162257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150482-1150617:1:exon

position:1150617:1
position: 1150617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1158562-1158565:1:exon

position:1158562:1
position: 1158562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158565:1
position: 1158565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1162243-1162257:1:exon

position:1162243:1
position: 1162243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990715
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1153169..1155258)
location: region:1153169-1155258:-1
so has part: feature:1153169-1155258:-1:exon
subclass of: SO_0000010

117990715
type: Gene
SIO_000068: ncbigene

position:1153169:-1
position: 1153169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155258:-1
position: 1155258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153169-1155258:-1:exon

LOC117990715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990715
product: EEF1A lysine methyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034978200.1
SIO_010081: LOC117990715
subclass of: SO_0000673
so part of: LOC117990715
location: complement(join(1153169..1153549,1153998..1154148,1154612..1154780,1155228..1155258))
location: region:1153169-1155258:-1
so has part: feature:1155228-1155258:-1:exon
so has part: feature:1154612-1154780:-1:exon
so has part: feature:1153998-1154148:-1:exon
so has part: feature:1153169-1153549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1155228-1155258:-1:exon

position:1155228:-1
position: 1155228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154612-1154780:-1:exon

position:1154612:-1
position: 1154612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154780:-1
position: 1154780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1153998-1154148:-1:exon

position:1153998:-1
position: 1153998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154148:-1
position: 1154148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1153169-1153549:-1:exon

position:1153549:-1
position: 1153549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990715
product: EEF1A lysine methyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034978198.1
SIO_010081: LOC117990715
subclass of: SO_0000673
so part of: LOC117990715
location: complement(join(1153169..1153549,1153998..1154148,1154612..1154799))
location: region:1153169-1154799:-1
so has part: feature:1154612-1154799:-1:exon
so has part: feature:1153998-1154148:-1:exon
so has part: feature:1153169-1153549:-1:exon

position:1154799:-1
position: 1154799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154612-1154799:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153998-1154148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153169-1153549:-1:exon

LOC117990715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 1
translation: MEEDDDIPALSAVTFAALQEFYAEKQKRQEILEKLESQKQLNENIIFEEDWQLSQFWYDEATVQALVKVIDNLLPDSGKVALISCPTLFVSVKRQLGNRANVTLLEYDRRFEVHGSDFIYYDYNSPDKLPADLEHTFDLVIADPPFLSEECITKISKTIQLLAKEKIVVCTGAVMKEHAEKLLSLKQCDFKPQHRNNLANEFSCYANFDLDEVLR
SIO_010081: LOC117990715
subclass of: SO_0000673
so part of: LOC117990715
location: complement(join(1153206..1153549,1153998..1154148,1154612..1154764))
location: region:1153206-1154764:-1
so has part: feature:1154612-1154764:-1:exon
so has part: feature:1153998-1154148:-1:exon
so has part: feature:1153206-1153549:-1:exon

XP_034834089.1
type: Protein
SIO_000068: ncbiprotein

position:1153206:-1
position: 1153206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154764:-1
position: 1154764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154612-1154764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153998-1154148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153206-1153549:-1:exon

LOC117990715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 1
translation: MEEDDDIPALSAVTFAALQEFYAEKQKRQEILEKLESQKQLNENIIFEEDWQLSQFWYDEATVQALVKVIDNLLPDSGKVALISCPTLFVSVKRQLGNRANVTLLEYDRRFEVHGSDFIYYDYNSPDKLPADLEHTFDLVIADPPFLSEECITKISKTIQLLAKEKIVVCTGAVMKEHAEKLLSLKQCDFKPQHRNNLANEFSCYANFDLDEVLR
SIO_010081: LOC117990715
subclass of: SO_0000673
so part of: LOC117990715
location: complement(join(1153206..1153549,1153998..1154148,1154612..1154764))
location: region:1153206-1154764:-1
so has part: feature:1154612-1154764:-1:exon
so has part: feature:1153998-1154148:-1:exon
so has part: feature:1153206-1153549:-1:exon

XP_034834091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154612-1154764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153998-1154148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153206-1153549:-1:exon

LOC117990716
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1155069..1156139
location: region:1155069-1156139:1
so has part: feature:1155069-1156139:1:exon
subclass of: SO_0000010

117990716
type: Gene
SIO_000068: ncbigene

position:1155069:1
position: 1155069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156139:1
position: 1156139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155069-1156139:1:exon

LOC117990716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990716
product: N-alpha-acetyltransferase 80
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_034978201.1
SIO_010081: LOC117990716
subclass of: SO_0000673
so part of: LOC117990716
location: join(1155069..1155252,1155490..1156139)
location: region:1155069-1156139:1
so has part: feature:1155069-1155252:1:exon
so has part: feature:1155490-1156139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1155069-1155252:1:exon

position:1155252:1
position: 1155252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155490-1156139:1:exon

position:1155490:1
position: 1155490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 80
translation: MDSEHLEVVPIHKYPQYLRPCCELINNEWPRSETARMMSLQASCDELPTNLILINKEKHILGHCKLTPIPSMPLSCFIESVVISRLMRGQKLGTFLMKQVEKYCKDVLKLEMIHLSTKGQEDFYAKLGYEVCAPVSIYGSSISYSTGASSSKTIPVPIRNIDKCVALVDVDNNAPPPPPMPKPQNVVNTLKSNRTYMFKNLV
SIO_010081: LOC117990716
subclass of: SO_0000673
so part of: LOC117990716
location: 1155497..1156105
location: region:1155497-1156105:1
so has part: feature:1155497-1156105:1:exon

XP_034834092.1
type: Protein
SIO_000068: ncbiprotein

position:1155497:1
position: 1155497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156105:1
position: 1156105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155497-1156105:1:exon

LOC117990714
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1156918..1177303)
location: region:1156918-1177303:-1
so has part: feature:1156918-1177303:-1:exon
subclass of: SO_0000010

117990714
type: Gene
SIO_000068: ncbigene

position:1156918:-1
position: 1156918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177303:-1
position: 1177303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156918-1177303:-1:exon

LOC117990714
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990714
product: protein RRP5 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978197.1
SIO_010081: LOC117990714
subclass of: SO_0000673
so part of: LOC117990714
location: complement(join(1156918..1157112,1158622..1158787,1160816..1161071,1161470..1161598,1162455..1162667,1162996..1163958,1164044..1164124,1165460..1165579,1166095..1166250,1167523..1167614,1167838..1168026,1169549..1169681,1170664..1170801,1171954..1172061,1172561..1172715,1173706..1173825,1174546..1174693,1175421..1175576,1176688..1176831,1177171..1177303))
location: region:1156918-1177303:-1
so has part: feature:1177171-1177303:-1:exon
so has part: feature:1176688-1176831:-1:exon
so has part: feature:1175421-1175576:-1:exon
so has part: feature:1174546-1174693:-1:exon
so has part: feature:1173706-1173825:-1:exon
so has part: feature:1172561-1172715:-1:exon
so has part: feature:1171954-1172061:-1:exon
so has part: feature:1170664-1170801:-1:exon
so has part: feature:1169549-1169681:-1:exon
so has part: feature:1167838-1168026:-1:exon
so has part: feature:1167523-1167614:-1:exon
so has part: feature:1166095-1166250:-1:exon
so has part: feature:1165460-1165579:-1:exon
so has part: feature:1164044-1164124:-1:exon
so has part: feature:1162996-1163958:-1:exon
so has part: feature:1162455-1162667:-1:exon
so has part: feature:1161470-1161598:-1:exon
so has part: feature:1160816-1161071:-1:exon
so has part: feature:1158622-1158787:-1:exon
so has part: feature:1156918-1157112:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177171-1177303:-1:exon

position:1177171:-1
position: 1177171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176688-1176831:-1:exon

position:1176688:-1
position: 1176688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176831:-1
position: 1176831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175421-1175576:-1:exon

position:1175421:-1
position: 1175421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175576:-1
position: 1175576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1174546-1174693:-1:exon

position:1174546:-1
position: 1174546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174693:-1
position: 1174693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1173706-1173825:-1:exon

position:1173706:-1
position: 1173706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173825:-1
position: 1173825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1172561-1172715:-1:exon

position:1172561:-1
position: 1172561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172715:-1
position: 1172715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1171954-1172061:-1:exon

position:1171954:-1
position: 1171954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172061:-1
position: 1172061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1170664-1170801:-1:exon

position:1170664:-1
position: 1170664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170801:-1
position: 1170801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1169549-1169681:-1:exon

position:1169549:-1
position: 1169549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169681:-1
position: 1169681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1167838-1168026:-1:exon

position:1167838:-1
position: 1167838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168026:-1
position: 1168026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1167523-1167614:-1:exon

position:1167523:-1
position: 1167523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167614:-1
position: 1167614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1166095-1166250:-1:exon

position:1166095:-1
position: 1166095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166250:-1
position: 1166250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1165460-1165579:-1:exon

position:1165460:-1
position: 1165460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165579:-1
position: 1165579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1164044-1164124:-1:exon

position:1164044:-1
position: 1164044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164124:-1
position: 1164124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1162996-1163958:-1:exon

position:1162996:-1
position: 1162996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163958:-1
position: 1163958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1162455-1162667:-1:exon

position:1162455:-1
position: 1162455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162667:-1
position: 1162667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1161470-1161598:-1:exon

position:1161470:-1
position: 1161470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161598:-1
position: 1161598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1160816-1161071:-1:exon

position:1160816:-1
position: 1160816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161071:-1
position: 1161071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1158622-1158787:-1:exon

position:1158622:-1
position: 1158622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158787:-1
position: 1158787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1156918-1157112:-1:exon

position:1157112:-1
position: 1157112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990714
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RRP5 homolog
translation: MADTEEYFPRGGKKPTTTYFKQNENFLGGAQKGERKKKKLKRKTEDDDGYLSEDLVQEVDQSYKICGIGLNYKVVKEGQLFLGRVNQVKETLVRVRLPCRMCGVVMACHISEAYTKMLEAYVNDQIDEVQELKEMFRLGQYVVVKVLEVQTSKLMLSMMPQHVNSTRTQADLHKGALLQAAVSSVEDHGYVMDIGIPGTRAFLPKDSANPEIQFYTGSLTWVAIKSLSQESGVITLSNSLEVLQKALQRKPAALLPGTALEFTVDKPLDNGIEGHVLDNTTAYIQRNQVDTGKGKKPALGHKIRARLLYVVPPKNIPFMTMRNIFETTYPDLTQEQKFKDGDIIKDAQVLKVVGRTVHLKLGEGSVGLLSLRRIAVHEDFTDEQVLLNSYPIGSTHEVRVLCYNLCDYVYSVTDEPAALAEKYFNTSQLHVGDMVDATVTAITDKYLFVTVGRVKGSVPQLHMSETGIFDDPKKASNSKLTKKKFKVGQVVKARVLALNPEKQFLYLTLKPSLLDPELEILQSLDQAAVGKAYTGVIACIKDYLLVSFFNSVTAFVPKRWVCAEPLDNLSDAFHRGQIVKCTIINVNPETKKMCGSLTKAPFKVIENYVRPTKRKFKDRECDAEKQKPDDSETIKQDENEQKDISNSEMNKIDSDEIQEPKKKKKKKNNKVTEEEIDGSNENIETGETNRKKKKKNKIINVDNSTNNADTEINGTTTIKDGKKKKDKKLKKQEVEQKEDSESDPIETDICDDIDQVLTPQNWSFVDLTDCLTAKQYKKRVVALIKCIDERTKRLESIDKNIGNMEEKGLNAKNKKYHTAMHTEKLVIQKQTEKLSEVLKIAQEKLKEFGIEIQKDSKKKEKSVATTSDEIKVEVKEDVDKLKEMKLDIDSLQPVVKVPSAKDFWSLDTDVITDKIKIKESSSSEEEEQEKPKKKRKKLTVAEKASKAREEEERIREMEKRAIESENAPRSSDQFERALLAQPNCSQLWIAYMAFHLQATEIEKARAVGRKALHTINFREEGEKLNVWLALLNLEHRFGTKETQQKTIEDALQMNEPYEIHSKLLDILVETSKPQELVSLVELMLRKYRGRAPVYAACGLACFSAGLTDKARQVMQKGIAALEKKEHVSLLVRFAQLERSHGDRERSEALFEQVLAVYPQRVDVCSAYVDLLIKAKDVDHVRQVMERMTSLQLPARKMKVLYKKWIEAEEKIGDAAHADSARQLAMKFINKAKF
SIO_010081: LOC117990714
subclass of: SO_0000673
so part of: LOC117990714
location: complement(join(1156953..1157112,1158622..1158787,1160816..1161071,1161470..1161598,1162455..1162667,1162996..1163958,1164044..1164124,1165460..1165579,1166095..1166250,1167523..1167614,1167838..1168026,1169549..1169681,1170664..1170801,1171954..1172061,1172561..1172715,1173706..1173825,1174546..1174693,1175421..1175576,1176688..1176831,1177171..1177245))
location: region:1156953-1177245:-1
so has part: feature:1177171-1177245:-1:exon
so has part: feature:1176688-1176831:-1:exon
so has part: feature:1175421-1175576:-1:exon
so has part: feature:1174546-1174693:-1:exon
so has part: feature:1173706-1173825:-1:exon
so has part: feature:1172561-1172715:-1:exon
so has part: feature:1171954-1172061:-1:exon
so has part: feature:1170664-1170801:-1:exon
so has part: feature:1169549-1169681:-1:exon
so has part: feature:1167838-1168026:-1:exon
so has part: feature:1167523-1167614:-1:exon
so has part: feature:1166095-1166250:-1:exon
so has part: feature:1165460-1165579:-1:exon
so has part: feature:1164044-1164124:-1:exon
so has part: feature:1162996-1163958:-1:exon
so has part: feature:1162455-1162667:-1:exon
so has part: feature:1161470-1161598:-1:exon
so has part: feature:1160816-1161071:-1:exon
so has part: feature:1158622-1158787:-1:exon
so has part: feature:1156953-1157112:-1:exon

XP_034834088.1
type: Protein
SIO_000068: ncbiprotein

position:1156953:-1
position: 1156953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177245:-1
position: 1177245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177171-1177245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176688-1176831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175421-1175576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174546-1174693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173706-1173825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1172561-1172715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1171954-1172061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1170664-1170801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1169549-1169681:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1167838-1168026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1167523-1167614:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1166095-1166250:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1165460-1165579:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1164044-1164124:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1162996-1163958:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1162455-1162667:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1161470-1161598:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1160816-1161071:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1158622-1158787:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1156953-1157112:-1:exon

LOC117990586
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1178260..1188475
location: region:1178260-1188475:1
so has part: feature:1178260-1188475:1:exon
subclass of: SO_0000010

117990586
type: Gene
SIO_000068: ncbigene

position:1178260:1
position: 1178260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188475:1
position: 1188475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178260-1188475:1:exon

LOC117990586
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990586
product: flavin reductase (NADPH)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_034978041.1
SIO_010081: LOC117990586
subclass of: SO_0000673
so part of: LOC117990586
location: join(1178260..1178668,1180896..1181282,1188196..1188475)
location: region:1178260-1188475:1
so has part: feature:1178260-1178668:1:exon
so has part: feature:1180896-1181282:1:exon
so has part: feature:1188196-1188475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178260-1178668:1:exon

position:1178668:1
position: 1178668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180896-1181282:1:exon

position:1180896:1
position: 1180896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181282:1
position: 1181282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1188196-1188475:1:exon

position:1188196:1
position: 1188196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990586
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flavin reductase (NADPH)
translation: MKKIVIFGATGTTGLCAVEAALKKSLEVRAFVRDPTKLPDDIKDKVEVFKGDILEPDSVFNAIEGTDGVVIAIGTRGSLDPTSDMSEGTKNIIEGMRAKNVKNVSACISAFLFYEIDKVPPRFVEVTKDHERMFIELKDSGLNWIAVFSPHISDDPSREIIVEVNPEKSPGRSISKCDLGKFLVDSLTEEKYYKSVIGLCNVPQQ
SIO_010081: LOC117990586
subclass of: SO_0000673
so part of: LOC117990586
location: join(1178596..1178668,1180896..1181282,1188196..1188353)
location: region:1178596-1188353:1
so has part: feature:1178596-1178668:1:exon
so has part: feature:1180896-1181282:1:exon
so has part: feature:1188196-1188353:1:exon

XP_034833932.1
type: Protein
SIO_000068: ncbiprotein

position:1178596:1
position: 1178596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188353:1
position: 1188353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178596-1178668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180896-1181282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1188196-1188353:1:exon

LOC117990795
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1190892..1192980)
location: region:1190892-1192980:-1
so has part: feature:1190892-1192980:-1:exon
subclass of: SO_0000010

117990795
type: Gene
SIO_000068: ncbigene

position:1190892:-1
position: 1190892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192980:-1
position: 1192980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190892-1192980:-1:exon

LOC117990795
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990795
product: uncharacterized serine-rich protein C215.13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034978286.1
SIO_010081: LOC117990795
subclass of: SO_0000673
so part of: LOC117990795
location: complement(join(1190892..1191626,1192722..1192980))
location: region:1190892-1192980:-1
so has part: feature:1192722-1192980:-1:exon
so has part: feature:1190892-1191626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1192722-1192980:-1:exon

position:1192722:-1
position: 1192722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1190892-1191626:-1:exon

position:1191626:-1
position: 1191626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized serine-rich protein C215.13-like
translation: MGYRIKKVLTPISSISLTLSSSSPEISSSWTTNSSNTSSTISDVTDASISSKRSSSGTDSTLGMITTPWTTESWSGESVNETIEAYSETVMNTLTSLTVNPESTESIGGVTSELNTASINTVTLLERNEPISYFSVNLNSVPSESTGKLKMKTKAKSYSEIESTFDSWTVESFTSFVEYSDSNIVKVRYPWSPCTYLSSTDIYPDSMDTFRSSVISLINSPTLDSTHETVRYYINVLHESDIICS
SIO_010081: LOC117990795
subclass of: SO_0000673
so part of: LOC117990795
location: complement(join(1190892..1191626,1192722..1192724))
location: region:1190892-1192724:-1
so has part: feature:1192722-1192724:-1:exon
so has part: feature:1190892-1191626:-1:exon

XP_034834177.1
type: Protein
SIO_000068: ncbiprotein

position:1192724:-1
position: 1192724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192722-1192724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1190892-1191626:-1:exon

LOC117990602
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1194006..1198157)
location: region:1194006-1198157:-1
so has part: feature:1194006-1198157:-1:exon
subclass of: SO_0000010

117990602
type: Gene
SIO_000068: ncbigene

position:1194006:-1
position: 1194006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198157:-1
position: 1198157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194006-1198157:-1:exon

LOC117990602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990602
product: mitochondrial GTPase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_034978060.1
SIO_010081: LOC117990602
subclass of: SO_0000673
so part of: LOC117990602
location: complement(join(1194006..1194277,1196133..1196320,1196704..1196912,1197558..1198157))
location: region:1194006-1198157:-1
so has part: feature:1197558-1198157:-1:exon
so has part: feature:1196704-1196912:-1:exon
so has part: feature:1196133-1196320:-1:exon
so has part: feature:1194006-1194277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1197558-1198157:-1:exon

position:1197558:-1
position: 1197558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1196704-1196912:-1:exon

position:1196704:-1
position: 1196704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196912:-1
position: 1196912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1196133-1196320:-1:exon

position:1196133:-1
position: 1196133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196320:-1
position: 1196320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1194006-1194277:-1:exon

position:1194277:-1
position: 1194277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial GTPase 1
translation: MAAKFDAAAYNFRKKCPYVSKDLLRWFPGHMNKGLKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPHVLVLNKQDLTIRSLIPKIKDQLKSEEGVQNVVFTNCKDQHCRGLKTLRPLMIDIIKSSNRYNRSEELDYNVMIIGVPNVGKSSLINMLRSRNMNIRHALPVGAVAGVTRSLMNKIRINNDPKIFMFDTPGILEPSVSNIEMGLKLALCASLQDHLVGEEIIADYLLYWLNSHGNFKYVEYMGLTEPCDDINKVLISGALKFSRVRRTRDFDGRVRDVPDITEVARTMIRAFRIGELGMTLLDIDLLKMDREKVQEVLA
SIO_010081: LOC117990602
subclass of: SO_0000673
so part of: LOC117990602
location: complement(join(1194077..1194277,1196133..1196320,1196704..1196912,1197558..1197961))
location: region:1194077-1197961:-1
so has part: feature:1197558-1197961:-1:exon
so has part: feature:1196704-1196912:-1:exon
so has part: feature:1196133-1196320:-1:exon
so has part: feature:1194077-1194277:-1:exon

XP_034833951.1
type: Protein
SIO_000068: ncbiprotein

position:1194077:-1
position: 1194077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197961:-1
position: 1197961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197558-1197961:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1196704-1196912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1196133-1196320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1194077-1194277:-1:exon

LOC117990438
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1198336..1209143
location: region:1198336-1209143:1
so has part: feature:1198336-1209143:1:exon
subclass of: SO_0000010

117990438
type: Gene
SIO_000068: ncbigene

position:1198336:1
position: 1198336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209143:1
position: 1209143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198336-1209143:1:exon

LOC117990438
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990438
product: radial spoke head protein 6 homolog A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034977878.1
SIO_010081: LOC117990438
subclass of: SO_0000673
so part of: LOC117990438
location: join(1198336..1198529,1198947..1199136,1199896..1200018,1200979..1201067,1201362..1201449,1202212..1202300,1202893..1203025,1203619..1203740,1204228..1204381,1204893..1205038,1205884..1206098,1206676..1206820,1209051..1209143)
location: region:1198336-1209143:1
so has part: feature:1198336-1198529:1:exon
so has part: feature:1198947-1199136:1:exon
so has part: feature:1199896-1200018:1:exon
so has part: feature:1200979-1201067:1:exon
so has part: feature:1201362-1201449:1:exon
so has part: feature:1202212-1202300:1:exon
so has part: feature:1202893-1203025:1:exon
so has part: feature:1203619-1203740:1:exon
so has part: feature:1204228-1204381:1:exon
so has part: feature:1204893-1205038:1:exon
so has part: feature:1205884-1206098:1:exon
so has part: feature:1206676-1206820:1:exon
so has part: feature:1209051-1209143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1198336-1198529:1:exon

position:1198529:1
position: 1198529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1198947-1199136:1:exon

position:1198947:1
position: 1198947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199136:1
position: 1199136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1199896-1200018:1:exon

position:1199896:1
position: 1199896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200018:1
position: 1200018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1200979-1201067:1:exon

position:1200979:1
position: 1200979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201067:1
position: 1201067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1201362-1201449:1:exon

position:1201362:1
position: 1201362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201449:1
position: 1201449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1202212-1202300:1:exon

position:1202212:1
position: 1202212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202300:1
position: 1202300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1202893-1203025:1:exon

position:1202893:1
position: 1202893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1203025:1
position: 1203025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1203619-1203740:1:exon

position:1203619:1
position: 1203619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1203740:1
position: 1203740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1204228-1204381:1:exon

position:1204228:1
position: 1204228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204381:1
position: 1204381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1204893-1205038:1:exon

position:1204893:1
position: 1204893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205038:1
position: 1205038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1205884-1206098:1:exon

position:1205884:1
position: 1205884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1206098:1
position: 1206098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1206676-1206820:1:exon

position:1206676:1
position: 1206676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1206820:1
position: 1206820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1209051-1209143:1:exon

position:1209051:1
position: 1209051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990438
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990438
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: radial spoke head protein 6 homolog A
translation: MSQTFMLEPDIIAATENVMPDLNNDLVLAKNFLKQQCAATGDTLYDHLVDVVHKILSQKPPDVVDQFEQYSWQVKQEKFRPNFDLLNDIYLSPPQLQLVRRVEEMFQLVSSKSLRLEEMGEEQELDLEEESVKPRIADLIEHNYYFREGGYGLPDSECYALYVALNMLAIKEPVAAVRFFGKIFGTRMNYYVAEADLTIDELDRRIREFEMKDMPGEEEGNEDRDQEVAVEEEKEIAGEGEVKEEKPKEPVPPKLPPIPVSTWQPPPPIPVERPGQGVNKKVYYVCNQPGEPWIGLPDVTPAQIRVARLTVRCMTGDLDAEVLTFPPFEGSERNYLRAQIARIAASTSISPQGFYTFGSGEEEEDIDLEEGAGDLAFNPNPFYQGHTLKDLLDPNLTYWVHHGRYILKQGRTLWWNPNVVMEEDLEEEEEEGPAPIPPESGPSLFTPLSEDVRIEGLNSWSARVSSTLVPDRAIAVLRSNVWPGAVAYSTSGKKSECLYVGLGLKFQPLNFSPVQLPRAQDEYIIGPEVMEMADPTFADEEAYRIAHLPPPPPPELLGEGEGFPLEEEEED
SIO_010081: LOC117990438
subclass of: SO_0000673
so part of: LOC117990438
location: join(1198399..1198529,1198947..1199136,1199896..1200018,1200979..1201067,1201362..1201449,1202212..1202300,1202893..1203025,1203619..1203740,1204228..1204381,1204893..1205038,1205884..1206098,1206676..1206820,1209051..1209143)
location: region:1198399-1209143:1
so has part: feature:1198399-1198529:1:exon
so has part: feature:1198947-1199136:1:exon
so has part: feature:1199896-1200018:1:exon
so has part: feature:1200979-1201067:1:exon
so has part: feature:1201362-1201449:1:exon
so has part: feature:1202212-1202300:1:exon
so has part: feature:1202893-1203025:1:exon
so has part: feature:1203619-1203740:1:exon
so has part: feature:1204228-1204381:1:exon
so has part: feature:1204893-1205038:1:exon
so has part: feature:1205884-1206098:1:exon
so has part: feature:1206676-1206820:1:exon
so has part: feature:1209051-1209143:1:exon

XP_034833769.1
type: Protein
SIO_000068: ncbiprotein

position:1198399:1
position: 1198399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198399-1198529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198947-1199136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1199896-1200018:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1200979-1201067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1201362-1201449:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1202212-1202300:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1202893-1203025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1203619-1203740:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1204228-1204381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1204893-1205038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1205884-1206098:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1206676-1206820:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1209051-1209143:1:exon

LOC117990436
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1210537..1227933)
location: region:1210537-1227933:-1
so has part: feature:1210537-1227933:-1:exon
subclass of: SO_0000010

117990436
type: Gene
SIO_000068: ncbigene

position:1210537:-1
position: 1210537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227933:-1
position: 1227933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210537-1227933:-1:exon

LOC117990436
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990436
product: nuclear export mediator factor NEMF homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034977876.1
SIO_010081: LOC117990436
subclass of: SO_0000673
so part of: LOC117990436
location: complement(join(1210537..1210785,1211823..1211950,1213296..1213448,1214065..1214261,1215041..1215110,1215941..1216212,1217314..1217446,1218059..1218230,1218796..1218974,1219958..1220153,1221028..1221278,1221554..1221736,1222593..1222784,1223414..1223589,1224582..1224718,1225836..1226038,1226997..1227168,1227740..1227933))
location: region:1210537-1227933:-1
so has part: feature:1227740-1227933:-1:exon
so has part: feature:1226997-1227168:-1:exon
so has part: feature:1225836-1226038:-1:exon
so has part: feature:1224582-1224718:-1:exon
so has part: feature:1223414-1223589:-1:exon
so has part: feature:1222593-1222784:-1:exon
so has part: feature:1221554-1221736:-1:exon
so has part: feature:1221028-1221278:-1:exon
so has part: feature:1219958-1220153:-1:exon
so has part: feature:1218796-1218974:-1:exon
so has part: feature:1218059-1218230:-1:exon
so has part: feature:1217314-1217446:-1:exon
so has part: feature:1215941-1216212:-1:exon
so has part: feature:1215041-1215110:-1:exon
so has part: feature:1214065-1214261:-1:exon
so has part: feature:1213296-1213448:-1:exon
so has part: feature:1211823-1211950:-1:exon
so has part: feature:1210537-1210785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1227740-1227933:-1:exon

position:1227740:-1
position: 1227740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1226997-1227168:-1:exon

position:1226997:-1
position: 1226997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227168:-1
position: 1227168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1225836-1226038:-1:exon

position:1225836:-1
position: 1225836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226038:-1
position: 1226038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1224582-1224718:-1:exon

position:1224582:-1
position: 1224582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224718:-1
position: 1224718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1223414-1223589:-1:exon

position:1223414:-1
position: 1223414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223589:-1
position: 1223589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1222593-1222784:-1:exon

position:1222593:-1
position: 1222593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222784:-1
position: 1222784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1221554-1221736:-1:exon

position:1221554:-1
position: 1221554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221736:-1
position: 1221736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1221028-1221278:-1:exon

position:1221028:-1
position: 1221028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221278:-1
position: 1221278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1219958-1220153:-1:exon

position:1219958:-1
position: 1219958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220153:-1
position: 1220153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1218796-1218974:-1:exon

position:1218796:-1
position: 1218796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218974:-1
position: 1218974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1218059-1218230:-1:exon

position:1218059:-1
position: 1218059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218230:-1
position: 1218230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1217314-1217446:-1:exon

position:1217314:-1
position: 1217314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217446:-1
position: 1217446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1215941-1216212:-1:exon

position:1215941:-1
position: 1215941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216212:-1
position: 1216212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1215041-1215110:-1:exon

position:1215041:-1
position: 1215041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215110:-1
position: 1215110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1214065-1214261:-1:exon

position:1214065:-1
position: 1214065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214261:-1
position: 1214261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1213296-1213448:-1:exon

position:1213296:-1
position: 1213296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213448:-1
position: 1213448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1211823-1211950:-1:exon

position:1211823:-1
position: 1211823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211950:-1
position: 1211950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1210537-1210785:-1:exon

position:1210785:-1
position: 1210785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990436
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear export mediator factor NEMF homolog
translation: MKNRFNTYDIVCMVAELQRLIGMRVNQVYDIDNRTYVIRLQRSEEKSVLLLESGNRFHTTQFEWPKNVAPSGFTMKLRKHLKNKRLEKLNQLGIDRIVDLQFGSGEAAYHVILELYDRGNIVLTDCDWTILNVLRPHVEGDKIRFAVKEKYPLDRAKTSYEAPSADALKEILANSRPGDNLKKILNPNLEYGAAVIDHVLQENGLSGTMKISADPNKGFQVEQHLDKLLTALKQAEMLIETGKTQVAKGYIIQKKEDRPNPEGGSTFLLTNQEFNPMLYRQNKDQPYAEFDTFDRAVDEFFSALEGQKIDLKTVHVEREAMKKLQNVRKDHEKRITELERVQLEDRKAAEMISRNEPLVEQARLAIQTAIANQMSWDDIQLLVKTAQDNNDPVASAIKQLKLKTNHITLLLKDPYDFDDDNDNDEDDENDDGDEKGKLKPMMIDIDLSLTAFANARRYYDQKRNAAKKQQKTVESADKALKSAERKTKQTLKEAHTISNITKARKTYWFEKFFWFISSDNYLVIGGRDQQQNELLVKRYMRSTDIYVHAEVTGASSVVIKCPSGPPPPRTLSEAGQAAVAYSVAWEAKVLTRAWWVHGHQVSKSAPTGEYLTTGSFMIRGKKNYLVPEHLQFGFSFMFRLEDSCIEKHRDERKCIASDDTNSEVTSVQDTEEEQEIIVSDDGEDELPEENQEAQQKSTLHTISEETINTNTKSLQDITDNDDNKRQESEGPKIQEQEKDDNEQEQEEKREGEENEKENDSDSDSSEGAFDTHIKVDHGTGQVIIESKTRTISEVSDRSDDKTFSFPALPKKGSKPQKQKQKQEQKKEEKPTIKRGQKSKLKKMKEKYKNQDDEDRAAMMEFLQPDKASKESKKALKQASKPKSKAAVRQAKIPQPAPLILEAESDGEEPELEPETDQPGADADTEMLCQLTGNPFPEDELLFAVPVVAPYSSLLSYKYKVKLTPGTNKRGKAAKTAVQVFLKDKAGTNRERDLLKAVKEENIARNFPGKVKLSAPQLHKKKK
SIO_010081: LOC117990436
subclass of: SO_0000673
so part of: LOC117990436
location: complement(join(1210587..1210785,1211823..1211950,1213296..1213448,1214065..1214261,1215041..1215110,1215941..1216212,1217314..1217446,1218059..1218230,1218796..1218974,1219958..1220153,1221028..1221278,1221554..1221736,1222593..1222784,1223414..1223589,1224582..1224718,1225836..1226038,1226997..1227168,1227740..1227795))
location: region:1210587-1227795:-1
so has part: feature:1227740-1227795:-1:exon
so has part: feature:1226997-1227168:-1:exon
so has part: feature:1225836-1226038:-1:exon
so has part: feature:1224582-1224718:-1:exon
so has part: feature:1223414-1223589:-1:exon
so has part: feature:1222593-1222784:-1:exon
so has part: feature:1221554-1221736:-1:exon
so has part: feature:1221028-1221278:-1:exon
so has part: feature:1219958-1220153:-1:exon
so has part: feature:1218796-1218974:-1:exon
so has part: feature:1218059-1218230:-1:exon
so has part: feature:1217314-1217446:-1:exon
so has part: feature:1215941-1216212:-1:exon
so has part: feature:1215041-1215110:-1:exon
so has part: feature:1214065-1214261:-1:exon
so has part: feature:1213296-1213448:-1:exon
so has part: feature:1211823-1211950:-1:exon
so has part: feature:1210587-1210785:-1:exon

XP_034833767.1
type: Protein
SIO_000068: ncbiprotein

position:1210587:-1
position: 1210587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227795:-1
position: 1227795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227740-1227795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1226997-1227168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1225836-1226038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1224582-1224718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1223414-1223589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1222593-1222784:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221554-1221736:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221028-1221278:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1219958-1220153:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1218796-1218974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1218059-1218230:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1217314-1217446:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1215941-1216212:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1215041-1215110:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1214065-1214261:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1213296-1213448:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1211823-1211950:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1210587-1210785:-1:exon

Trnas-cga
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: Trnas-cga
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1217573..1217644)
location: region:1217573-1217644:-1
so has part: feature:1217573-1217644:-1:exon
subclass of: SO_0000663

117990936
type: Gene
SIO_000068: ncbigene

position:1217573:-1
position: 1217573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217644:-1
position: 1217644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217573-1217644:-1:exon

Trnas-cga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2795564
gene: Trnas-cga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon CGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1217609..1217611),aa:Ser, seq:cga)
SIO_010081: Trnas-cga
subclass of: SO_0000673
so part of: Trnas-cga
location: complement(1217573..1217644)
location: region:1217573-1217644:-1
so has part: feature:1217573-1217644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217573-1217644:-1:exon

LOC117990437
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1228650..1232469
location: region:1228650-1232469:1
so has part: feature:1228650-1232469:1:exon
subclass of: SO_0000010

117990437
type: Gene
SIO_000068: ncbigene

position:1228650:1
position: 1228650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232469:1
position: 1232469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228650-1232469:1:exon

LOC117990437
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990437
product: exosome complex component RRP46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034977877.1
SIO_010081: LOC117990437
subclass of: SO_0000673
so part of: LOC117990437
location: join(1228650..1228755,1229126..1229252,1230068..1230176,1230821..1231019,1232295..1232469)
location: region:1228650-1232469:1
so has part: feature:1228650-1228755:1:exon
so has part: feature:1229126-1229252:1:exon
so has part: feature:1230068-1230176:1:exon
so has part: feature:1230821-1231019:1:exon
so has part: feature:1232295-1232469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1228650-1228755:1:exon

position:1228755:1
position: 1228755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1229126-1229252:1:exon

position:1229126:1
position: 1229126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229252:1
position: 1229252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1230068-1230176:1:exon

position:1230068:1
position: 1230068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230176:1
position: 1230176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1230821-1231019:1:exon

position:1230821:1
position: 1230821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231019:1
position: 1231019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1232295-1232469:1:exon

position:1232295:1
position: 1232295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990437
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exosome complex component RRP46
translation: MGAEDLKDFKLKPMKCELNFLSKSDGSAILSQGDTVVLASVNGPLDIKISSQSIEKATLEVLFCSKEGKPSVADRYKENVIRQTCETAILGCLYPRTGISLTIQELENYGGLLTCAVNSACLALINSGVAMRHVVAALCCAVDEVGNLILEPTHQQAQNARAKLYFVFDSRDKNLVTGFTEGSFSEDTYEEALAQCRLASDLVFEFYRDVVKKYSRVI
SIO_010081: LOC117990437
subclass of: SO_0000673
so part of: LOC117990437
location: join(1228659..1228755,1229126..1229252,1230068..1230176,1230821..1231019,1232295..1232419)
location: region:1228659-1232419:1
so has part: feature:1228659-1228755:1:exon
so has part: feature:1229126-1229252:1:exon
so has part: feature:1230068-1230176:1:exon
so has part: feature:1230821-1231019:1:exon
so has part: feature:1232295-1232419:1:exon

XP_034833768.1
type: Protein
SIO_000068: ncbiprotein

position:1228659:1
position: 1228659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232419:1
position: 1232419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228659-1228755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1229126-1229252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1230068-1230176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1230821-1231019:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232295-1232419:1:exon

LOC117990484
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1238917..1243300
location: region:1238917-1243300:1
so has part: feature:1238917-1243300:1:exon
subclass of: SO_0000010

117990484
type: Gene
SIO_000068: ncbigene

position:1238917:1
position: 1238917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243300:1
position: 1243300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238917-1243300:1:exon

LOC117990484
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990484
product: decaprenyl-diphosphate synthase subunit 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034977934.1
SIO_010081: LOC117990484
subclass of: SO_0000673
so part of: LOC117990484
location: join(1238917..1239046,1239412..1239580,1240032..1240338,1240733..1240888,1242747..1243300)
location: region:1238917-1243300:1
so has part: feature:1238917-1239046:1:exon
so has part: feature:1239412-1239580:1:exon
so has part: feature:1240032-1240338:1:exon
so has part: feature:1240733-1240888:1:exon
so has part: feature:1242747-1243300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238917-1239046:1:exon

position:1239046:1
position: 1239046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1239412-1239580:1:exon

position:1239412:1
position: 1239412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239580:1
position: 1239580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1240032-1240338:1:exon

position:1240032:1
position: 1240032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240338:1
position: 1240338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1240733-1240888:1:exon

position:1240733:1
position: 1240733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240888:1
position: 1240888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1242747-1243300:1:exon

position:1242747:1
position: 1242747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990484
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990484
product: decaprenyl-diphosphate synthase subunit 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034977935.1
SIO_010081: LOC117990484
subclass of: SO_0000673
so part of: LOC117990484
location: join(1238917..1239046,1239415..1239580,1240032..1240338,1240733..1240888,1242747..1243300)
location: region:1238917-1243300:1
so has part: feature:1238917-1239046:1:exon
so has part: feature:1239415-1239580:1:exon
so has part: feature:1240032-1240338:1:exon
so has part: feature:1240733-1240888:1:exon
so has part: feature:1242747-1243300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238917-1239046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1239415-1239580:1:exon

position:1239415:1
position: 1239415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1240032-1240338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1240733-1240888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1242747-1243300:1:exon

LOC117990484
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: decaprenyl-diphosphate synthase subunit 2-like isoform X1
translation: MIWDHRFRFLGLKVVNLKFRSEGNFRNLRRTYSRWGGIISQREELDWRDVITEAEQIVGYPTSFLNLRWLFNDEIANTAIHLRKLVGTNHPLLKSAKNLLIGSKSNLQSVGLIVLLVSKAAGFQTQHFTKDLYDSGVLHSQRALAEIVEMKRTGHLIHKTMANLQDKEKHGDKFKDLLYGNKIVLLTGDYLLATCLQHLGGLRNNEVTELISTGLRDLVEGDFFGDHDDDNNSLPSKPKASNEVTSHYNWEHEDNLAKLGSNEYLGQGKDEWLLRTMLTSGSLLGKGCQAAMKLGKQEHLEKDAYKLGGHLAIIWQLYLDVKDFFTHPYSYSLVGAPVTLAIWEYPTVYSYIIEAKLDKKPVEFKQLYYAVRGTRALEYLTKFLEEEMAAILKYSNKFPVEDARVAIQKMAATVHSETLQYME
SIO_010081: LOC117990484
subclass of: SO_0000673
so part of: LOC117990484
location: join(1238961..1239046,1239412..1239580,1240032..1240338,1240733..1240888,1242747..1243300)
location: region:1238961-1243300:1
so has part: feature:1238961-1239046:1:exon
so has part: feature:1239412-1239580:1:exon
so has part: feature:1240032-1240338:1:exon
so has part: feature:1240733-1240888:1:exon
so has part: feature:1242747-1243300:1:exon

XP_034833825.1
type: Protein
SIO_000068: ncbiprotein

position:1238961:1
position: 1238961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238961-1239046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1239412-1239580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1240032-1240338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1240733-1240888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1242747-1243300:1:exon

LOC117990484
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: decaprenyl-diphosphate synthase subunit 2-like isoform X2
translation: MIWDHRFRFLGLKVVNLKFRSEGNFRNLRTYSRWGGIISQREELDWRDVITEAEQIVGYPTSFLNLRWLFNDEIANTAIHLRKLVGTNHPLLKSAKNLLIGSKSNLQSVGLIVLLVSKAAGFQTQHFTKDLYDSGVLHSQRALAEIVEMKRTGHLIHKTMANLQDKEKHGDKFKDLLYGNKIVLLTGDYLLATCLQHLGGLRNNEVTELISTGLRDLVEGDFFGDHDDDNNSLPSKPKASNEVTSHYNWEHEDNLAKLGSNEYLGQGKDEWLLRTMLTSGSLLGKGCQAAMKLGKQEHLEKDAYKLGGHLAIIWQLYLDVKDFFTHPYSYSLVGAPVTLAIWEYPTVYSYIIEAKLDKKPVEFKQLYYAVRGTRALEYLTKFLEEEMAAILKYSNKFPVEDARVAIQKMAATVHSETLQYME
SIO_010081: LOC117990484
subclass of: SO_0000673
so part of: LOC117990484
location: join(1238961..1239046,1239415..1239580,1240032..1240338,1240733..1240888,1242747..1243300)
location: region:1238961-1243300:1
so has part: feature:1238961-1239046:1:exon
so has part: feature:1239415-1239580:1:exon
so has part: feature:1240032-1240338:1:exon
so has part: feature:1240733-1240888:1:exon
so has part: feature:1242747-1243300:1:exon

XP_034833826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1238961-1239046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1239415-1239580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1240032-1240338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1240733-1240888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1242747-1243300:1:exon

LOC117990615
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1249157..1252643)
location: region:1249157-1252643:-1
so has part: feature:1249157-1252643:-1:exon
subclass of: SO_0000010

117990615
type: Gene
SIO_000068: ncbigene

position:1249157:-1
position: 1249157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252643:-1
position: 1252643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1249157-1252643:-1:exon

LOC117990615
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990615
product: decaprenyl-diphosphate synthase subunit 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034978070.1
SIO_010081: LOC117990615
subclass of: SO_0000673
so part of: LOC117990615
location: complement(join(1249157..1250190,1252283..1252643))
location: region:1249157-1252643:-1
so has part: feature:1252283-1252643:-1:exon
so has part: feature:1249157-1250190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1252283-1252643:-1:exon

position:1252283:-1
position: 1252283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1249157-1250190:-1:exon

position:1250190:-1
position: 1250190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: decaprenyl-diphosphate synthase subunit 2-like
translation: MSYAMIRHLRRTSLLCEQIRVESTLNNVTQEEFLFRPPVPQWSKVIREAEKIVGYPTSFMNLRWLLSDEFANLAMHLRKIVDSNHPIMKTAKTVLYNEQNNLQPWGLIILLLSKAISPSTYSLEATTVTEKQRMLAELTEMIRTGHYIHKGLLNIPFEERDKTKETSIFANKIAILIGDYLLVTANGMLARLRNQDLSYLISTALRDLSEGEFFGPRDDQNLPLPGRPVKRNEDNFKISCETIPLDVKNMLGSPEKEWTLRTMYNGGSLFGRGCEGAVLLAGKTNSDQKKAYLFGCHLCLAWQAASELQKFTSNNKNTFSLVSAPVLFALNDSPEIYESLKSVNNVSSIDFDELKMRITETDAIEQTKSLFLQHAEKAKSYVEMFGDNQSVSTIKRLIKTVQC
SIO_010081: LOC117990615
subclass of: SO_0000673
so part of: LOC117990615
location: complement(join(1249219..1250190,1252283..1252522))
location: region:1249219-1252522:-1
so has part: feature:1252283-1252522:-1:exon
so has part: feature:1249219-1250190:-1:exon

XP_034833961.1
type: Protein
SIO_000068: ncbiprotein

position:1249219:-1
position: 1249219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252522:-1
position: 1252522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252283-1252522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1249219-1250190:-1:exon

LOC117990890
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1281028..1803749)
location: region:1281028-1803749:-1
so has part: feature:1281028-1803749:-1:exon
subclass of: SO_0000010

117990890
type: Gene
SIO_000068: ncbigene

position:1281028:-1
position: 1281028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803749:-1
position: 1803749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281028-1803749:-1:exon

LOC117990890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990890
product: homeobox protein homothorax, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034978386.1
SIO_010081: LOC117990890
subclass of: SO_0000673
so part of: LOC117990890
location: complement(join(1281028..1282056,1282975..1283149,1294570..1294628,1398174..1398250,1457532..1457680,1510928..1511026,1546216..1546224,1622404..1622527,1681643..1681813,1695310..1695360,1707978..1708028,1747867..1748008,1760067..1760239,1803460..1803749))
location: region:1281028-1803749:-1
so has part: feature:1803460-1803749:-1:exon
so has part: feature:1760067-1760239:-1:exon
so has part: feature:1747867-1748008:-1:exon
so has part: feature:1707978-1708028:-1:exon
so has part: feature:1695310-1695360:-1:exon
so has part: feature:1681643-1681813:-1:exon
so has part: feature:1622404-1622527:-1:exon
so has part: feature:1546216-1546224:-1:exon
so has part: feature:1510928-1511026:-1:exon
so has part: feature:1457532-1457680:-1:exon
so has part: feature:1398174-1398250:-1:exon
so has part: feature:1294570-1294628:-1:exon
so has part: feature:1282975-1283149:-1:exon
so has part: feature:1281028-1282056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1803460-1803749:-1:exon

position:1803460:-1
position: 1803460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1760067-1760239:-1:exon

position:1760067:-1
position: 1760067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760239:-1
position: 1760239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1747867-1748008:-1:exon

position:1747867:-1
position: 1747867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1748008:-1
position: 1748008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1707978-1708028:-1:exon

position:1707978:-1
position: 1707978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708028:-1
position: 1708028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1695310-1695360:-1:exon

position:1695310:-1
position: 1695310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695360:-1
position: 1695360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1681643-1681813:-1:exon

position:1681643:-1
position: 1681643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1681813:-1
position: 1681813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1622404-1622527:-1:exon

position:1622404:-1
position: 1622404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1622527:-1
position: 1622527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1546216-1546224:-1:exon

position:1546216:-1
position: 1546216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546224:-1
position: 1546224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1510928-1511026:-1:exon

position:1510928:-1
position: 1510928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511026:-1
position: 1511026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1457532-1457680:-1:exon

position:1457532:-1
position: 1457532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457680:-1
position: 1457680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1398174-1398250:-1:exon

position:1398174:-1
position: 1398174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398250:-1
position: 1398250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1294570-1294628:-1:exon

position:1294570:-1
position: 1294570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294628:-1
position: 1294628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1282975-1283149:-1:exon

position:1282975:-1
position: 1282975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283149:-1
position: 1283149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1281028-1282056:-1:exon

position:1282056:-1
position: 1282056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990890
product: homeobox protein homothorax, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034978385.1
SIO_010081: LOC117990890
subclass of: SO_0000673
so part of: LOC117990890
location: complement(join(1281028..1282056,1282975..1283164,1294570..1294628,1398174..1398250,1457532..1457680,1510928..1511026,1546216..1546224,1622404..1622527,1681643..1681813,1695310..1695360,1707978..1708028,1747867..1748008,1760067..1760239,1803460..1803749))
location: region:1281028-1803749:-1
so has part: feature:1803460-1803749:-1:exon
so has part: feature:1760067-1760239:-1:exon
so has part: feature:1747867-1748008:-1:exon
so has part: feature:1707978-1708028:-1:exon
so has part: feature:1695310-1695360:-1:exon
so has part: feature:1681643-1681813:-1:exon
so has part: feature:1622404-1622527:-1:exon
so has part: feature:1546216-1546224:-1:exon
so has part: feature:1510928-1511026:-1:exon
so has part: feature:1457532-1457680:-1:exon
so has part: feature:1398174-1398250:-1:exon
so has part: feature:1294570-1294628:-1:exon
so has part: feature:1282975-1283164:-1:exon
so has part: feature:1281028-1282056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1803460-1803749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1760067-1760239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1747867-1748008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1707978-1708028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1695310-1695360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1681643-1681813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1622404-1622527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546216-1546224:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1510928-1511026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1457532-1457680:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1398174-1398250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1294570-1294628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1282975-1283164:-1:exon

position:1283164:-1
position: 1283164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1281028-1282056:-1:exon

LOC117990890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein homothorax isoform X2
translation: MAQPRYDESLHGGGYMEGGAMYHEHRLTHPHIPPVHYPPPAAPAHALPGEPLVHKRDKDAIYGHPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERESARPPDTNGEPRSAPDSSHDGASTPDVRPPSSSLSYGGAVNDDVRSPGSGGTPGPLSQPPPTLDATDPDAMGKWCGSRREWSSPPDVARRVYSSVFLGSPGEYPGDASNASIGSGEGTGEEDDDTNGKKNQKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVFPHAGPSGAYSPEATMGYMMDGQQMMHRPPTDPAFHQGYAHYPAEYYGHHL
SIO_010081: LOC117990890
subclass of: SO_0000673
so part of: LOC117990890
location: complement(join(1282992..1283149,1294570..1294628,1398174..1398250,1457532..1457680,1510928..1511026,1546216..1546224,1622404..1622527,1681643..1681813,1695310..1695360,1707978..1708028,1747867..1748008,1760067..1760239,1803460..1803474))
location: region:1282992-1803474:-1
so has part: feature:1803460-1803474:-1:exon
so has part: feature:1760067-1760239:-1:exon
so has part: feature:1747867-1748008:-1:exon
so has part: feature:1707978-1708028:-1:exon
so has part: feature:1695310-1695360:-1:exon
so has part: feature:1681643-1681813:-1:exon
so has part: feature:1622404-1622527:-1:exon
so has part: feature:1546216-1546224:-1:exon
so has part: feature:1510928-1511026:-1:exon
so has part: feature:1457532-1457680:-1:exon
so has part: feature:1398174-1398250:-1:exon
so has part: feature:1294570-1294628:-1:exon
so has part: feature:1282992-1283149:-1:exon

XP_034834277.1
type: Protein
SIO_000068: ncbiprotein

position:1282992:-1
position: 1282992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803474:-1
position: 1803474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1803460-1803474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1760067-1760239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1747867-1748008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1707978-1708028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1695310-1695360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1681643-1681813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1622404-1622527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546216-1546224:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1510928-1511026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1457532-1457680:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1398174-1398250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1294570-1294628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1282992-1283149:-1:exon

LOC117990890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein homothorax isoform X1
translation: MAQPRYDESLHGGGYMEGGAMYHEHRLTHPHIPPVHYPPPAAPAHALPGEPLVHKRDKDAIYGHPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERESARPPDTNGEPRSAPDSSHDGASTPDVRPPSSSLSYGGAVNDDVRSPGSGGTPGPLSQPPPTLDATDPDAMGKWCGSRREWSSPPDVARRVYSSVFLGSPGEYPGDASNASIGSGEGTGEEDDDTNGKKNQKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVFYPAVFPHAGPSGAYSPEATMGYMMDGQQMMHRPPTDPAFHQGYAHYPAEYYGHHL
SIO_010081: LOC117990890
subclass of: SO_0000673
so part of: LOC117990890
location: complement(join(1282992..1283164,1294570..1294628,1398174..1398250,1457532..1457680,1510928..1511026,1546216..1546224,1622404..1622527,1681643..1681813,1695310..1695360,1707978..1708028,1747867..1748008,1760067..1760239,1803460..1803474))
location: region:1282992-1803474:-1
so has part: feature:1803460-1803474:-1:exon
so has part: feature:1760067-1760239:-1:exon
so has part: feature:1747867-1748008:-1:exon
so has part: feature:1707978-1708028:-1:exon
so has part: feature:1695310-1695360:-1:exon
so has part: feature:1681643-1681813:-1:exon
so has part: feature:1622404-1622527:-1:exon
so has part: feature:1546216-1546224:-1:exon
so has part: feature:1510928-1511026:-1:exon
so has part: feature:1457532-1457680:-1:exon
so has part: feature:1398174-1398250:-1:exon
so has part: feature:1294570-1294628:-1:exon
so has part: feature:1282992-1283164:-1:exon

XP_034834276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1803460-1803474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1760067-1760239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1747867-1748008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1707978-1708028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1695310-1695360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1681643-1681813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1622404-1622527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546216-1546224:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1510928-1511026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1457532-1457680:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1398174-1398250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1294570-1294628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1282992-1283164:-1:exon

LOC117990891
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1460094..1483289
location: region:1460094-1483289:1
so has part: feature:1460094-1483289:1:exon
subclass of: SO_0000011

117990891
type: Gene
SIO_000068: ncbigene

position:1460094:1
position: 1460094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483289:1
position: 1483289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1460094-1483289:1:exon

LOC117990891
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2795564
nc RNA class: lncRNA
gene: LOC117990891
product: uncharacterized LOC117990891
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004674816.1
SIO_010081: LOC117990891
subclass of: SO_0000673
so part of: LOC117990891
location: join(1460094..1460164,1460340..1460341,1463016..1463024,1466377..1466380,1483278..1483289)
location: region:1460094-1483289:1
so has part: feature:1460094-1460164:1:exon
so has part: feature:1460340-1460341:1:exon
so has part: feature:1463016-1463024:1:exon
so has part: feature:1466377-1466380:1:exon
so has part: feature:1483278-1483289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1460094-1460164:1:exon

position:1460164:1
position: 1460164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1460340-1460341:1:exon

position:1460340:1
position: 1460340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460341:1
position: 1460341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1463016-1463024:1:exon

position:1463016:1
position: 1463016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463024:1
position: 1463024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1466377-1466380:1:exon

position:1466377:1
position: 1466377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466380:1
position: 1466380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1483278-1483289:1:exon

position:1483278:1
position: 1483278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990933
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990933
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(1780892..1781032)
location: region:1780892-1781032:-1
so has part: feature:1780892-1781032:-1:exon

117990933
type: Gene
SIO_000068: ncbigene

position:1780892:-1
position: 1780892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781032:-1
position: 1781032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1780892-1781032:-1:exon

LOC117990933
type: Exon
subclass of: SO_0000147
RO_0002162: 2795564
gene: LOC117990933
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117990933
subclass of: SO_0000673
so part of: LOC117990933
location: complement(1780892..1781032)
location: region:1780892-1781032:-1
so has part: feature:1780892-1781032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1780892-1781032:-1:exon

LOC117990515
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1863593..1868845
location: region:1863593-1868845:1
so has part: feature:1863593-1868845:1:exon
subclass of: SO_0000010

117990515
type: Gene
SIO_000068: ncbigene

position:1863593:1
position: 1863593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868845:1
position: 1868845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863593-1868845:1:exon

LOC117990515
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990515
product: proline-rich protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_034977959.1
SIO_010081: LOC117990515
subclass of: SO_0000673
so part of: LOC117990515
location: join(1863593..1863604,1866498..1866743,1868663..1868845)
location: region:1863593-1868845:1
so has part: feature:1863593-1863604:1:exon
so has part: feature:1866498-1866743:1:exon
so has part: feature:1868663-1868845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1863593-1863604:1:exon

position:1863604:1
position: 1863604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1866498-1866743:1:exon

position:1866498:1
position: 1866498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1866743:1
position: 1866743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1868663-1868845:1:exon

position:1868663:1
position: 1868663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 4-like
translation: MIAFRTTAILLLIAYASARPSDEWEPEGHSHSEHTKPYHVTVVKKIGVPVPHPVAVSVPQYVKIPIPQPYPVHVTIEQPIHVPVYKVVPHVVEKPVPYTVEKPVPYEVEKPYPVEVEKKVEVPIPKPYPVHVPVYKHIYHHKGGKH
SIO_010081: LOC117990515
subclass of: SO_0000673
so part of: LOC117990515
location: join(1863593..1863604,1866498..1866743,1868663..1868845)
location: region:1863593-1868845:1
so has part: feature:1863593-1863604:1:exon
so has part: feature:1866498-1866743:1:exon
so has part: feature:1868663-1868845:1:exon

XP_034833850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1863593-1863604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866498-1866743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868663-1868845:1:exon

LOC117990514
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1895175..1901871
location: region:1895175-1901871:1
so has part: feature:1895175-1901871:1:exon
subclass of: SO_0000010

117990514
type: Gene
SIO_000068: ncbigene

position:1895175:1
position: 1895175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901871:1
position: 1901871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895175-1901871:1:exon

LOC117990514
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990514
product: phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_034977958.1
SIO_010081: LOC117990514
subclass of: SO_0000673
so part of: LOC117990514
location: join(1895175..1895271,1895365..1895511,1896064..1896144,1899374..1899477,1900332..1900458,1901707..1901871)
location: region:1895175-1901871:1
so has part: feature:1895175-1895271:1:exon
so has part: feature:1895365-1895511:1:exon
so has part: feature:1896064-1896144:1:exon
so has part: feature:1899374-1899477:1:exon
so has part: feature:1900332-1900458:1:exon
so has part: feature:1901707-1901871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1895175-1895271:1:exon

position:1895271:1
position: 1895271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1895365-1895511:1:exon

position:1895365:1
position: 1895365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1895511:1
position: 1895511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1896064-1896144:1:exon

position:1896064:1
position: 1896064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896144:1
position: 1896144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1899374-1899477:1:exon

position:1899374:1
position: 1899374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1899477:1
position: 1899477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1900332-1900458:1:exon

position:1900332:1
position: 1900332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900458:1
position: 1900458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1901707-1901871:1:exon

position:1901707:1
position: 1901707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990514
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1
translation: MGTAMFARVTFYPTLLYNVVMERMTSRRWYDRMDDSVILGALPFTGMTKQLVEEENIKGVVSMNETYELKIFSNDAAKWREHNVEFLQLATTDIFEAPDQDKLYEGVQFINRFLPAGCKLPGMPAEGVNSGTVYVHCKAGRTRSATLVGCYLMMRNGWSPDEAVEYMKARRPHILLHTKQWQALDIFYRQHVRTKPMH
SIO_010081: LOC117990514
subclass of: SO_0000673
so part of: LOC117990514
location: join(1895269..1895271,1895365..1895511,1896064..1896144,1899374..1899477,1900332..1900458,1901707..1901841)
location: region:1895269-1901841:1
so has part: feature:1895269-1895271:1:exon
so has part: feature:1895365-1895511:1:exon
so has part: feature:1896064-1896144:1:exon
so has part: feature:1899374-1899477:1:exon
so has part: feature:1900332-1900458:1:exon
so has part: feature:1901707-1901841:1:exon

XP_034833849.1
type: Protein
SIO_000068: ncbiprotein

position:1895269:1
position: 1895269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901841:1
position: 1901841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895269-1895271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1895365-1895511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1896064-1896144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1899374-1899477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1900332-1900458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1901707-1901841:1:exon

LOC117990546
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1905469..1908146)
location: region:1905469-1908146:-1
so has part: feature:1905469-1908146:-1:exon
subclass of: SO_0000010

117990546
type: Gene
SIO_000068: ncbigene

position:1905469:-1
position: 1905469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908146:-1
position: 1908146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1905469-1908146:-1:exon

LOC117990546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990546
product: succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034977992.1
SIO_010081: LOC117990546
subclass of: SO_0000673
so part of: LOC117990546
location: complement(join(1905469..1905732,1906457..1906641,1907443..1907570,1907987..1908146))
location: region:1905469-1908146:-1
so has part: feature:1907987-1908146:-1:exon
so has part: feature:1907443-1907570:-1:exon
so has part: feature:1906457-1906641:-1:exon
so has part: feature:1905469-1905732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1907987-1908146:-1:exon

position:1907987:-1
position: 1907987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1907443-1907570:-1:exon

position:1907443:-1
position: 1907443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907570:-1
position: 1907570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1906457-1906641:-1:exon

position:1906457:-1
position: 1906457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906641:-1
position: 1906641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1905469-1905732:-1:exon

position:1905732:-1
position: 1905732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990546
product: succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034977991.1
SIO_010081: LOC117990546
subclass of: SO_0000673
so part of: LOC117990546
location: complement(join(1905469..1905732,1906457..1906641,1907443..1907579,1907987..1908146))
location: region:1905469-1908146:-1
so has part: feature:1907987-1908146:-1:exon
so has part: feature:1907443-1907579:-1:exon
so has part: feature:1906457-1906641:-1:exon
so has part: feature:1905469-1905732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1907987-1908146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1907443-1907579:-1:exon

position:1907579:-1
position: 1907579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1906457-1906641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1905469-1905732:-1:exon

LOC117990546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial isoform X2
translation: MAFSMLLRRPGSVLMQQAMKLATQPAVRPATQNTLQSLKSTLLKTETAPILNSVRCFRTSAIRFAEGKSQDHSKLWVIERVTSATLIPLIPLALIAPSKILDSALAIIMVAHSFWGLEAIAVDYVRASIFGPVIPKIAIGLVYLISIATLGGLFYVITHDIGIANTVRQFWSIKAGQKA
SIO_010081: LOC117990546
subclass of: SO_0000673
so part of: LOC117990546
location: complement(join(1905537..1905732,1906457..1906641,1907443..1907570,1907987..1908017))
location: region:1905537-1908017:-1
so has part: feature:1907987-1908017:-1:exon
so has part: feature:1907443-1907570:-1:exon
so has part: feature:1906457-1906641:-1:exon
so has part: feature:1905537-1905732:-1:exon

XP_034833883.1
type: Protein
SIO_000068: ncbiprotein

position:1905537:-1
position: 1905537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908017:-1
position: 1908017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1907987-1908017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1907443-1907570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1906457-1906641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1905537-1905732:-1:exon

LOC117990546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial isoform X1
translation: MAFSMLLRRPVCSGSVLMQQAMKLATQPAVRPATQNTLQSLKSTLLKTETAPILNSVRCFRTSAIRFAEGKSQDHSKLWVIERVTSATLIPLIPLALIAPSKILDSALAIIMVAHSFWGLEAIAVDYVRASIFGPVIPKIAIGLVYLISIATLGGLFYVITHDIGIANTVRQFWSIKAGQKA
SIO_010081: LOC117990546
subclass of: SO_0000673
so part of: LOC117990546
location: complement(join(1905537..1905732,1906457..1906641,1907443..1907579,1907987..1908017))
location: region:1905537-1908017:-1
so has part: feature:1907987-1908017:-1:exon
so has part: feature:1907443-1907579:-1:exon
so has part: feature:1906457-1906641:-1:exon
so has part: feature:1905537-1905732:-1:exon

XP_034833882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1907987-1908017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1907443-1907579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1906457-1906641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1905537-1905732:-1:exon

LOC117990489
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990489
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1908493..1912360
location: region:1908493-1912360:1
so has part: feature:1908493-1912360:1:exon
subclass of: SO_0000010

117990489
type: Gene
SIO_000068: ncbigene

position:1908493:1
position: 1908493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912360:1
position: 1912360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908493-1912360:1:exon

LOC117990489
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990489
product: 26S proteasome regulatory subunit 6A-B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034977939.1
SIO_010081: LOC117990489
subclass of: SO_0000673
so part of: LOC117990489
location: join(1908493..1909146,1909641..1909836,1910537..1910733,1911378..1911508,1912086..1912360)
location: region:1908493-1912360:1
so has part: feature:1908493-1909146:1:exon
so has part: feature:1909641-1909836:1:exon
so has part: feature:1910537-1910733:1:exon
so has part: feature:1911378-1911508:1:exon
so has part: feature:1912086-1912360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1908493-1909146:1:exon

position:1909146:1
position: 1909146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1909641-1909836:1:exon

position:1909641:1
position: 1909641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1909836:1
position: 1909836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1910537-1910733:1:exon

position:1910537:1
position: 1910537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910733:1
position: 1910733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1911378-1911508:1:exon

position:1911378:1
position: 1911378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1911508:1
position: 1911508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1912086-1912360:1:exon

position:1912086:1
position: 1912086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990489
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990489
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 6A-B
translation: MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRITHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKKANLSYYA
SIO_010081: LOC117990489
subclass of: SO_0000673
so part of: LOC117990489
location: join(1908592..1909146,1909641..1909836,1910537..1910733,1911378..1911508,1912086..1912293)
location: region:1908592-1912293:1
so has part: feature:1908592-1909146:1:exon
so has part: feature:1909641-1909836:1:exon
so has part: feature:1910537-1910733:1:exon
so has part: feature:1911378-1911508:1:exon
so has part: feature:1912086-1912293:1:exon

XP_034833830.1
type: Protein
SIO_000068: ncbiprotein

position:1908592:1
position: 1908592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912293:1
position: 1912293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908592-1909146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1909641-1909836:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1910537-1910733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1911378-1911508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1912086-1912293:1:exon

LOC117990548
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1919108..1946880
location: region:1919108-1946880:1
so has part: feature:1919108-1946880:1:exon
subclass of: SO_0000010

117990548
type: Gene
SIO_000068: ncbigene

position:1919108:1
position: 1919108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1946880:1
position: 1946880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919108-1946880:1:exon

LOC117990548
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990548
product: tubulin polyglutamylase TTLL5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034977996.1
SIO_010081: LOC117990548
subclass of: SO_0000673
so part of: LOC117990548
location: join(1919108..1919192,1919758..1919888,1934019..1934617,1935054..1935184,1935706..1935923,1937361..1937574,1938439..1938695,1939274..1939473,1940186..1940258,1940345..1940489,1941302..1941521,1941819..1941975,1942327..1942470,1943006..1943162,1945242..1945408,1946024..1946215,1946690..1946880)
location: region:1919108-1946880:1
so has part: feature:1919108-1919192:1:exon
so has part: feature:1919758-1919888:1:exon
so has part: feature:1934019-1934617:1:exon
so has part: feature:1935054-1935184:1:exon
so has part: feature:1935706-1935923:1:exon
so has part: feature:1937361-1937574:1:exon
so has part: feature:1938439-1938695:1:exon
so has part: feature:1939274-1939473:1:exon
so has part: feature:1940186-1940258:1:exon
so has part: feature:1940345-1940489:1:exon
so has part: feature:1941302-1941521:1:exon
so has part: feature:1941819-1941975:1:exon
so has part: feature:1942327-1942470:1:exon
so has part: feature:1943006-1943162:1:exon
so has part: feature:1945242-1945408:1:exon
so has part: feature:1946024-1946215:1:exon
so has part: feature:1946690-1946880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1919108-1919192:1:exon

position:1919192:1
position: 1919192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1919758-1919888:1:exon

position:1919758:1
position: 1919758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1919888:1
position: 1919888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1934019-1934617:1:exon

position:1934019:1
position: 1934019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1934617:1
position: 1934617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1935054-1935184:1:exon

position:1935054:1
position: 1935054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1935184:1
position: 1935184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1935706-1935923:1:exon

position:1935706:1
position: 1935706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1935923:1
position: 1935923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1937361-1937574:1:exon

position:1937361:1
position: 1937361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1937574:1
position: 1937574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1938439-1938695:1:exon

position:1938439:1
position: 1938439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1938695:1
position: 1938695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1939274-1939473:1:exon

position:1939274:1
position: 1939274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1939473:1
position: 1939473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1940186-1940258:1:exon

position:1940186:1
position: 1940186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1940258:1
position: 1940258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1940345-1940489:1:exon

position:1940345:1
position: 1940345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1940489:1
position: 1940489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1941302-1941521:1:exon

position:1941302:1
position: 1941302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1941521:1
position: 1941521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1941819-1941975:1:exon

position:1941819:1
position: 1941819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1941975:1
position: 1941975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1942327-1942470:1:exon

position:1942327:1
position: 1942327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1942470:1
position: 1942470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1943006-1943162:1:exon

position:1943006:1
position: 1943006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1943162:1
position: 1943162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1945242-1945408:1:exon

position:1945242:1
position: 1945242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1945408:1
position: 1945408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1946024-1946215:1:exon

position:1946024:1
position: 1946024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1946215:1
position: 1946215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1946690-1946880:1:exon

position:1946690:1
position: 1946690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117990548
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polyglutamylase TTLL5
translation: MGKVFVPHVSPETTNPSTSGLQTTPQNRDNMRKHDEETNGKEKDNEGSVADWVSGGPIGAKGAVLVFRSCVLASRTPSMESTTKTVGNNTGTTMLLNKAKNMARRLVAEPHSFSVRPKNIMHDVMETFGNSNKYTGQAYIVRHVSEADVPETQSIEEQGHEPLEHKRDIEDVLNDLSKITLKRNLNIENTTANIKPPEEPPPSNKEKDEKKCKKSKCKNKRKNTQRASSPTLDSDDSEHMLVKEMDSIKVLESSHMPARMLKITYKLVNTETKLLHRLLQAHGLQEAPTDAKDFNLMWAGLHPKPDVLRSLTPYQRVNHFPRSYELTRKDKLFKNIEKMQYFRGLKHFDFIPTTFLMPAEYKELCTTHYRTKGPWIVKPAASSRGRGIYIVNTPEQIPKGENVVVAKYIDKPLLIGGHKCDLRLYVCVTSIDPLLIYLYEEGLVRFATVKYDKTNKNLWNPCMHLCNYSINKYHTDYIKCDDPNAGNIGHKWTLSALLRHLRKQGRNTAALMAAIEDLVVKSILSSAQTITAAARVFVPSLFNCFELFGYDILIDDMLKPWLLEINLSPSLACESPLDARVKSALLADTLTLVGLPAVPMSKHEASPQNNSLKMRIGACRRVHSAENTLVRGKSTSASVAAQNQAIGPLAGLLTGEEIRIVRAVRAQYARRGGFVRIFPSQNSWQKYSQYLDPVTGIPVCSTSLNNNAPYTVVQHNYNLLVHSHVLPHFQHATVATSITDTPQRLKRYEAVCIAGAAPAVQLSDNPAPQPPRDARRAKDLVKKQLTDGLRLTTGEVRRAFGLYLTHVLKRVSSPSNELAVQHAALVLKFLRRASSSLRMPYNVKGPPAKMCDKDRCAVIAKQLNDFLYMYYRETDLYTDSEDRTGCVSNIHFAQFLYSASEADLEDVLMLLLRMENYVATFLGDGRGSALCVDLPPARRDPDPPRHTLLRHLAALAHINCRKYRPETETSSRSEPEEASTTDSVPPPPFTSSDVVLKDSLKQEKPLNLALKYARS
SIO_010081: LOC117990548
subclass of: SO_0000673
so part of: LOC117990548
location: join(1919872..1919888,1934019..1934617,1935054..1935184,1935706..1935923,1937361..1937574,1938439..1938695,1939274..1939473,1940186..1940258,1940345..1940489,1941302..1941521,1941819..1941975,1942327..1942470,1943006..1943162,1945242..1945408,1946024..1946215,1946690..1946846)
location: region:1919872-1946846:1
so has part: feature:1919872-1919888:1:exon
so has part: feature:1934019-1934617:1:exon
so has part: feature:1935054-1935184:1:exon
so has part: feature:1935706-1935923:1:exon
so has part: feature:1937361-1937574:1:exon
so has part: feature:1938439-1938695:1:exon
so has part: feature:1939274-1939473:1:exon
so has part: feature:1940186-1940258:1:exon
so has part: feature:1940345-1940489:1:exon
so has part: feature:1941302-1941521:1:exon
so has part: feature:1941819-1941975:1:exon
so has part: feature:1942327-1942470:1:exon
so has part: feature:1943006-1943162:1:exon
so has part: feature:1945242-1945408:1:exon
so has part: feature:1946024-1946215:1:exon
so has part: feature:1946690-1946846:1:exon

XP_034833887.1
type: Protein
SIO_000068: ncbiprotein

position:1919872:1
position: 1919872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1946846:1
position: 1946846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919872-1919888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1934019-1934617:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1935054-1935184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1935706-1935923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1937361-1937574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1938439-1938695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1939274-1939473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1940186-1940258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1940345-1940489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1941302-1941521:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1941819-1941975:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1942327-1942470:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1943006-1943162:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1945242-1945408:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1946024-1946215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1946690-1946846:1:exon

LOC117990502
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1951132..1956612)
location: region:1951132-1956612:-1
so has part: feature:1951132-1956612:-1:exon
subclass of: SO_0000010

117990502
type: Gene
SIO_000068: ncbigene

position:1951132:-1
position: 1951132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956612:-1
position: 1956612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1951132-1956612:-1:exon

LOC117990502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990502
product: RNA-binding protein 4.1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034977950.1
SIO_010081: LOC117990502
subclass of: SO_0000673
so part of: LOC117990502
location: complement(join(1951132..1951293,1954163..1954234,1955562..1956340,1956419..1956612))
location: region:1951132-1956612:-1
so has part: feature:1956419-1956612:-1:exon
so has part: feature:1955562-1956340:-1:exon
so has part: feature:1954163-1954234:-1:exon
so has part: feature:1951132-1951293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1956419-1956612:-1:exon

position:1956419:-1
position: 1956419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1955562-1956340:-1:exon

position:1955562:-1
position: 1955562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956340:-1
position: 1956340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1954163-1954234:-1:exon

position:1954163:-1
position: 1954163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1954234:-1
position: 1954234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1951132-1951293:-1:exon

position:1951293:-1
position: 1951293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 4.1-like isoform X2
translation: MVAQTKVFVGSLPQGSKPEELRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRDLHNSTFNGGVITVERGRIKERGGAPRGGGMRGGMRGSDRRGGMRGGPPRDSPYPPVRDRGMGGSMRGTPMGGSMSMRNGGGGSYDRGMERAPMGGGGYDDRYNGYGGEDRRRLSLMEGRGARDPYAAPPPMYPDDRRSYAAPVDDMAAMYPEERRAPMYPDERDMMDRRAPMHSASMSSGYDRAPPPRAAPVGNDDMYSRRPEPAMRAPTAAAAGYERDPYAQQYPPMGRYWSSPG
SIO_010081: LOC117990502
subclass of: SO_0000673
so part of: LOC117990502
location: complement(join(1951272..1951293,1954163..1954234,1955562..1956340,1956419..1956427))
location: region:1951272-1956427:-1
so has part: feature:1956419-1956427:-1:exon
so has part: feature:1955562-1956340:-1:exon
so has part: feature:1954163-1954234:-1:exon
so has part: feature:1951272-1951293:-1:exon

XP_034833841.1
type: Protein
SIO_000068: ncbiprotein

position:1951272:-1
position: 1951272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956427:-1
position: 1956427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1956419-1956427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1955562-1956340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1954163-1954234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951272-1951293:-1:exon

LOC117990502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990502
product: RNA-binding protein 4.1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034977949.1
SIO_010081: LOC117990502
subclass of: SO_0000673
so part of: LOC117990502
location: complement(join(1952556..1952765,1954163..1954234,1955562..1956340,1956419..1956612))
location: region:1952556-1956612:-1
so has part: feature:1956419-1956612:-1:exon
so has part: feature:1955562-1956340:-1:exon
so has part: feature:1954163-1954234:-1:exon
so has part: feature:1952556-1952765:-1:exon

position:1952556:-1
position: 1952556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1956419-1956612:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1955562-1956340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1954163-1954234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1952556-1952765:-1:exon

position:1952765:-1
position: 1952765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 4.1-like isoform X1
translation: MVAQTKVFVGSLPQGSKPEELRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRDLHNSTFNGGVITVERGRIKERGGAPRGGGMRGGMRGSDRRGGMRGGPPRDSPYPPVRDRGMGGSMRGTPMGGSMSMRNGGGGSYDRGMERAPMGGGGYDDRYNGYGGEDRRRLSLMEGRGARDPYAAPPPMYPDDRRSYAAPVDDMAAMYPEERRAPMYPDERDMMDRRAPMHSASMSSGYDRAPPPRAAPVGNDDMYSRRPEPAMRAPTAAAAGYERDPYAQQYPPMGRGGGAARRY
SIO_010081: LOC117990502
subclass of: SO_0000673
so part of: LOC117990502
location: complement(join(1952738..1952765,1954163..1954234,1955562..1956340,1956419..1956427))
location: region:1952738-1956427:-1
so has part: feature:1956419-1956427:-1:exon
so has part: feature:1955562-1956340:-1:exon
so has part: feature:1954163-1954234:-1:exon
so has part: feature:1952738-1952765:-1:exon

XP_034833840.1
type: Protein
SIO_000068: ncbiprotein

position:1952738:-1
position: 1952738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1956419-1956427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1955562-1956340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1954163-1954234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1952738-1952765:-1:exon

LOC117990767
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1957694..1968913)
location: region:1957694-1968913:-1
so has part: feature:1957694-1968913:-1:exon
subclass of: SO_0000010

117990767
type: Gene
SIO_000068: ncbigene

position:1957694:-1
position: 1957694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968913:-1
position: 1968913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1957694-1968913:-1:exon

LOC117990767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990767
product: RNA-binding protein lark-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034978264.1
SIO_010081: LOC117990767
subclass of: SO_0000673
so part of: LOC117990767
location: complement(join(1957694..1957775,1960770..1960841,1961620..1961901,1962824..1963053,1968436..1968654,1968744..1968913))
location: region:1957694-1968913:-1
so has part: feature:1968744-1968913:-1:exon
so has part: feature:1968436-1968654:-1:exon
so has part: feature:1962824-1963053:-1:exon
so has part: feature:1961620-1961901:-1:exon
so has part: feature:1960770-1960841:-1:exon
so has part: feature:1957694-1957775:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1968744-1968913:-1:exon

position:1968744:-1
position: 1968744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1968436-1968654:-1:exon

position:1968436:-1
position: 1968436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968654:-1
position: 1968654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1962824-1963053:-1:exon

position:1962824:-1
position: 1962824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963053:-1
position: 1963053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1961620-1961901:-1:exon

position:1961620:-1
position: 1961620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961901:-1
position: 1961901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1960770-1960841:-1:exon

position:1960770:-1
position: 1960770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960841:-1
position: 1960841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1957694-1957775:-1:exon

position:1957775:-1
position: 1957775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein lark-like isoform X1
translation: MVAQTKVFVGRLPEDAKPEDLRKLFERFGVVTECDIMNRCGFVHMETEEQAAAAIRDLHNTTFNGGVITVERGRIKERGQRGGGRGMRGGMRGGMDRRGGMRGGMRDAPYPMRDRGMGGPMRDRGMGHMRNSAPYDRSMERAPMGGATGYDDRYNGYGGEDRRGFALMDNRGARDPYAAPPPMYADDRQSYGAPVDSMYPDERDMMDRRAPMRSAPMTMSSGYDRAPPRAAPMASADMYSRRSDQNMWGGAAAAGSYERDPYAQQYPNAGRIIAPG
SIO_010081: LOC117990767
subclass of: SO_0000673
so part of: LOC117990767
location: complement(join(1957757..1957775,1960770..1960841,1961620..1961901,1962824..1963053,1968436..1968654,1968744..1968752))
location: region:1957757-1968752:-1
so has part: feature:1968744-1968752:-1:exon
so has part: feature:1968436-1968654:-1:exon
so has part: feature:1962824-1963053:-1:exon
so has part: feature:1961620-1961901:-1:exon
so has part: feature:1960770-1960841:-1:exon
so has part: feature:1957757-1957775:-1:exon

XP_034834155.1
type: Protein
SIO_000068: ncbiprotein

position:1957757:-1
position: 1957757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968752:-1
position: 1968752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1968744-1968752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1968436-1968654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962824-1963053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1961620-1961901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1960770-1960841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1957757-1957775:-1:exon

LOC117990767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990767
product: RNA-binding protein lark-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034978266.1
SIO_010081: LOC117990767
subclass of: SO_0000673
so part of: LOC117990767
location: complement(join(1959680..1960129,1960770..1960841,1961620..1961901,1962824..1963053,1968436..1968654,1968744..1968913))
location: region:1959680-1968913:-1
so has part: feature:1968744-1968913:-1:exon
so has part: feature:1968436-1968654:-1:exon
so has part: feature:1962824-1963053:-1:exon
so has part: feature:1961620-1961901:-1:exon
so has part: feature:1960770-1960841:-1:exon
so has part: feature:1959680-1960129:-1:exon

position:1959680:-1
position: 1959680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1968744-1968913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1968436-1968654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962824-1963053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1961620-1961901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1960770-1960841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1959680-1960129:-1:exon

position:1960129:-1
position: 1960129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein lark-like isoform X2
translation: MVAQTKVFVGRLPEDAKPEDLRKLFERFGVVTECDIMNRCGFVHMETEEQAAAAIRDLHNTTFNGGVITVERGRIKERGQRGGGRGMRGGMRGGMDRRGGMRGGMRDAPYPMRDRGMGGPMRDRGMGHMRNSAPYDRSMERAPMGGATGYDDRYNGYGGEDRRGFALMDNRGARDPYAAPPPMYADDRQSYGAPVDSMYPDERDMMDRRAPMRSAPMTMSSGYDRAPPRAAPMASADMYSRRSDQNMWGGAAAAGSYERDPYAQQYPNAGRW
SIO_010081: LOC117990767
subclass of: SO_0000673
so part of: LOC117990767
location: complement(join(1960123..1960129,1960770..1960841,1961620..1961901,1962824..1963053,1968436..1968654,1968744..1968752))
location: region:1960123-1968752:-1
so has part: feature:1968744-1968752:-1:exon
so has part: feature:1968436-1968654:-1:exon
so has part: feature:1962824-1963053:-1:exon
so has part: feature:1961620-1961901:-1:exon
so has part: feature:1960770-1960841:-1:exon
so has part: feature:1960123-1960129:-1:exon

XP_034834157.1
type: Protein
SIO_000068: ncbiprotein

position:1960123:-1
position: 1960123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1968744-1968752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1968436-1968654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962824-1963053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1961620-1961901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1960770-1960841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1960123-1960129:-1:exon

LOC117990768
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1975617..1978573)
location: region:1975617-1978573:-1
so has part: feature:1975617-1978573:-1:exon
subclass of: SO_0000010

117990768
type: Gene
SIO_000068: ncbigene

position:1975617:-1
position: 1975617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978573:-1
position: 1978573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1975617-1978573:-1:exon

LOC117990768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990768
product: uncharacterized LOC117990768
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_034978267.1
SIO_010081: LOC117990768
subclass of: SO_0000673
so part of: LOC117990768
location: complement(join(1975617..1975962,1977979..1978573))
location: region:1975617-1978573:-1
so has part: feature:1977979-1978573:-1:exon
so has part: feature:1975617-1975962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1977979-1978573:-1:exon

position:1977979:-1
position: 1977979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1975617-1975962:-1:exon

position:1975962:-1
position: 1975962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117990768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2795564
gene: LOC117990768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117990768
translation: MSIERRSCTGSDPHVTKRLCATLMFFIGVICVFGGYLLGRMARNEVRRSHDIVPINLTVAAEILYKKAKRVSPKAVHHNSPEKITAKLLDAFHCTAHDCGIHSITNNNVADFVKTSIHYHVAKLIRSINNASVYLDSLR
SIO_010081: LOC117990768
subclass of: SO_0000673
so part of: LOC117990768
location: complement(join(1975646..1975962,1977979..1978081))
location: region:1975646-1978081:-1
so has part: feature:1977979-1978081:-1:exon
so has part: feature:1975646-1975962:-1:exon

XP_034834158.1
type: Protein
SIO_000068: ncbiprotein

position:1975646:-1
position: 1975646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978081:-1
position: 1978081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977979-1978081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975646-1975962:-1:exon

LOC117990771
type: Gene
subclass of: SO_0000704
RO_0002162: 2795564
gene: LOC117990771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1984191..2006040)
location: region:1984191-2006040:-1
so has part: feature:1984191-2006040:-1:exon
subclass of: SO_0000010

117990771
type: Gene
SIO_000068: ncbigene

position:1984191:-1
position: 1984191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006040:-1
position: 2006040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1984191-2006040:-1:exon

LOC117990771
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2795564
gene: LOC117990771
product: transcription termination factor 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034978272.1
SIO_010081: LOC117990771
subclass of: SO_0000673
so part of: LOC117990771
location: complement(join(1984191..1984386,1988361..1988518,1989318..1989481,1989992..1990142,1991054..1991250,1992577..1992712,1993603..1993794,1994251..1994460,1995294..1995490,1996061..1996171,1996752..1996952,1997790..1997909,1998413..1998542,1999016..1999252,2002259..2002599,2003095..2003977,2005060..2005137,2005333..2005431,2005805..2006040))
location: region:1984191-2006040:-1
so has part: feature:2005805-2006040:-1:exon
so has part: feature:2005333-2005431:-1:exon
so has part: feature:2005060-2005137:-1:exon
so has part: feature:2003095-2003977:-1:exon
so has part: feature:2002259-2002599:-1:exon
so has part: feature:1999016-1999252:-1:exon
so has part: feature:1998413-1998542:-1:exon
so has part: feature:1997790-1997909:-1:exon
so has part: feature:1996752-1996952:-1:exon
so has part: feature:1996061-1996171:-1:exon
so has part: feature:1995294-1995490:-1:exon
so has part: feature:1994251-1994460:-1:exon
so has part: feature:1993603-1993794:-1:exon
so has part: feature:1992577-1992712:-1:exon
so has part: feature:1991054-1991250:-1:exon
so has part: feature:1989992-1990142:-1:exon
so has part: feature:1989318-1989481:-1:exon
so has part: feature:1988361-1988518:-1:exon
so has part: feature:1984191-1984386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2005805-2006040:-1:exon

position:2005805:-1
position: 2005805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2005333-2005431:-1:exon

position:2005333:-1
position: 2005333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005431:-1
position: 2005431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2005060-2005137:-1:exon

position:2005060:-1
position: 2005060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005137:-1
position: 2005137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2003095-2003977:-1:exon

position:2003095:-1
position: 2003095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003977:-1
position: 2003977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2002259-2002599:-1:exon

position:2002259:-1
position: 2002259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002599:-1
position: 2002599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1999016-1999252:-1:exon

position:1999016:-1
position: 1999016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1999252:-1
position: 1999252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1998413-1998542:-1:exon

position:1998413:-1
position: 1998413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998542:-1
position: 1998542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1997790-1997909:-1:exon

position:1997790:-1
position: 1997790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997909:-1
position: 1997909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1996752-1996952:-1:exon

position:1996752:-1
position: 1996752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996952:-1
position: 1996952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1996061-1996171:-1:exon

position:1996061:-1
position: 1996061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996171:-1
position: 1996171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1995294-1995490:-1:exon

position:1995294:-1
position: 1995294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995490:-1
position: 1995490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1994251-1994460:-1:exon

position:1994251:-1
position: 1994251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994460:-1
position: 1994460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1993603-1993794:-1:exon

position:1993603:-1
position: 1993603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993794:-1
position: 1993794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1992577-1992712:-1:exon

position:1992577:-1
position: 1992577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992712:-1
position: 1992712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1991054-1991250:-1:exon

position:1991054:-1
position: 1991054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1991250:-1
position: 1991250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1989992-1990142:-1:exon

position:1989992:-1
position: 1989992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1990142:-1
position: 1990142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1989318-1989481:-1:exon

position:1989318:-1
position: 1989318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989481:-1
position: 1989481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1988361-1988518:-1:exon

position:1988361:-1
position: 1988361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition