Pectobacterium parvum strain FN20211 plasmid unnamed1, complete sequence.
type: Entry
definition: Pectobacterium parvum strain FN20211 plasmid unnamed1, complete sequence.
sequence version: NZ_CP087393.1
sequence date: 2023-06-02
sequence: sequence
division: CON
label: NZ_CP087393.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN23227730
keyword: RefSeq
source: Pectobacterium parvum
organism: Pectobacterium parvum
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium.
reference: 1
references: 35491949
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP087393.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 15-NOV-2021\nAssembly Method :: HGAP v. OCT-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 750.0x\nSequencing Technology :: Illumina NovaSeq; Oxford Nanopore\n PromethION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 06/02/2023 00:23:34\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,271\nCDSs (total) :: 4,166\nGenes (coding) :: 4,002\nCDSs (with protein) :: 4,002\nGenes (RNA) :: 105\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 77\nncRNAs :: 6\nPseudo Genes (total) :: 164\nCDSs (without protein) :: 164\nPseudo Genes (ambiguous residues) :: 0 of 164\nPseudo Genes (frameshifted) :: 75 of 164\nPseudo Genes (incomplete) :: 106 of 164\nPseudo Genes (internal stop) :: 51 of 164\nPseudo Genes (multiple problems) :: 60 of 164\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 7703
topology: circular
so has quality: SO_0000988
location: 1..7703
location: region:1-7703:1
RO_0002162: 2778550

NZ_CP087393
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN23227730
type: BioSample
SIO_000068: biosample

1
title: High-Quality Complete Genome Resource of Pectobacterium parvum Isolate FN20211 Causing Aerial Stem Rot of Potato
author: Wang, J.
author: Han, W.
author: Pirhonen, M.
author: Pan, Y.
author: Zhang, D.
author: Zhao, D.
author: Li, Q.
author: Cheng, J.
author: Yang, Z.
author: Zhu, J.
journal: Mol Plant Microbe Interact
volume: 35
issue: 6
pages: 488-491
year: 2022
pubmed: 35491949

35491949
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Wang, J.
journal: Submitted (17-NOV-2021) Plant Pathology, Hebei Agricultural University, Lekai South Street 2596, Baoding, Hebei 071001, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7703:1
position: 7703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7703:1:source
so part of: sequence
organism: Pectobacterium parvum
mol type: genomic DNA
strain: FN20211
isolation source: potato plant
host: Solanum tuberosum
plasmid: unnamed1
country: China:Fengning
lat lon: 41.12 N 116.38 E
collection date: 2020-07

2778550
type: Taxonomy
SIO_000068: taxonomy

LOZ86_RS21215
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21215
old locus tag: LOZ86_21215
so part of: sequence
location: 1..183
location: region:1-183:1
so has part: feature:1-183:1:exon
subclass of: SO_0000010

position:183:1
position: 183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-183:1:exon

LOZ86_RS21215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21215
old locus tag: LOZ86_21215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009112017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDNTPLRPDELLDQCCALSYAVTAITHDQVREILAFVLHEKLRDFYDCYHPEQLPDKDD
SIO_010081: LOZ86_RS21215
subclass of: SO_0000673
so part of: LOZ86_RS21215
location: 1..183
location: region:1-183:1
so has part: feature:1-183:1:exon

WP_072013623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-183:1:exon

LOZ86_RS21220
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21220
old locus tag: LOZ86_21220
so part of: sequence
location: complement(200..577)
location: region:200-577:-1
so has part: feature:200-577:-1:exon
subclass of: SO_0000010

position:200:-1
position: 200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577:-1
position: 577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200-577:-1:exon

LOZ86_RS21220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21220
old locus tag: LOZ86_21220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019454714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAWVSVRQAMELTGKGRSSLYRDMAKGRVSYRSESDGGRSLDTSELMRVYGELKPDETTQWDTRGQGDETDNSVMKDLVLELKALREEVSGLKLELQEIRRLEYKPAPVESENVHPKPWWRRWLG
SIO_010081: LOZ86_RS21220
subclass of: SO_0000673
so part of: LOZ86_RS21220
location: complement(200..577)
location: region:200-577:-1
so has part: feature:200-577:-1:exon

WP_039318321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200-577:-1:exon

LOZ86_RS21225
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21225
old locus tag: LOZ86_21225
so part of: sequence
location: 1133..1357
location: region:1133-1357:1
so has part: feature:1133-1357:1:exon
subclass of: SO_0000010

position:1133:1
position: 1133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357:1
position: 1357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133-1357:1:exon

LOZ86_RS21225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21225
old locus tag: LOZ86_21225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010848996.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEFSVSQELAALQEETRLIRKPRYRKSRLDRYTGELRQLHQAGASAAELQRWLRAKRIRVVLSTVTRWLARHG
SIO_010081: LOZ86_RS21225
subclass of: SO_0000673
so part of: LOZ86_RS21225
location: 1133..1357
location: region:1133-1357:1
so has part: feature:1133-1357:1:exon

WP_103161203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1133-1357:1:exon

LOZ86_RS21230
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21230
old locus tag: LOZ86_21230
so part of: sequence
location: 1432..1692
location: region:1432-1692:1
so has part: feature:1432-1692:1:exon
subclass of: SO_0000010

position:1432:1
position: 1432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692:1
position: 1692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432-1692:1:exon

LOZ86_RS21230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21230
old locus tag: LOZ86_21230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001089474.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSTHYENANFLRELAESLPHLIPSGSSDKAALLQRLANEELAQAEYEERARAKVAEARADTRPSMTTDQLRQQLQRRYQEKHDVV
SIO_010081: LOZ86_RS21230
subclass of: SO_0000673
so part of: LOZ86_RS21230
location: 1432..1692
location: region:1432-1692:1
so has part: feature:1432-1692:1:exon

WP_039318269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1432-1692:1:exon

LOZ86_RS21235
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21235
old locus tag: LOZ86_21235
so part of: sequence
location: 1682..1981
location: region:1682-1981:1
so has part: feature:1682-1981:1:exon
subclass of: SO_0000010

position:1682:1
position: 1682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1981:1
position: 1981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1682-1981:1:exon

LOZ86_RS21235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21235
old locus tag: LOZ86_21235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010848978.1
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MSYDVEWKASATEDVMALFDYIAENASLWDARHVTERLLASTDKLAEFPKLYELDPRYGEGVRRISLTGQHVLYDVDDPTQKVQVLAVIGQRQNPQQIR
SIO_010081: LOZ86_RS21235
subclass of: SO_0000673
so part of: LOZ86_RS21235
location: 1682..1981
location: region:1682-1981:1
so has part: feature:1682-1981:1:exon

WP_230243180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1682-1981:1:exon

LOZ86_RS21240
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21240
old locus tag: LOZ86_21240
so part of: sequence
location: 2047..2889
location: region:2047-2889:1
so has part: feature:2047-2889:1:exon
subclass of: SO_0000010

position:2047:1
position: 2047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889:1
position: 2889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2047-2889:1:exon

LOZ86_RS21240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21240
old locus tag: LOZ86_21240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008091974.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MKAIQGESLRSVGTVRNYEQALTRVAEWVRASRILGGLRELTPSLAVSYLESRGESVGQKTLDMERQAIQAMMHHVTGILPLTERLPVIRADHPQILTGRAYTSEQITRICAAQTPKNALATELAYAAGLRAHELYTLARPDEQPPSVRQADTTKWTGRSGITYTVHGKGGLVREIQLPKALASRLEAVRRDHTVILTDRGVNHTSRYALGGGHLWSNSFSAAALRVLGWSAGAHGVRHSYAQERMRELQHQGLLREAALATVSQEMGHFRPEITETYLR
SIO_010081: LOZ86_RS21240
subclass of: SO_0000673
so part of: LOZ86_RS21240
location: 2047..2889
location: region:2047-2889:1
so has part: feature:2047-2889:1:exon

WP_230243181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2047-2889:1:exon

LOZ86_RS21245
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21245
old locus tag: LOZ86_21245
so part of: sequence
location: 2886..3497
location: region:2886-3497:1
so has part: feature:2886-3497:1:exon
subclass of: SO_0000010

position:2886:1
position: 2886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3497:1
position: 3497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2886-3497:1:exon

LOZ86_RS21245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21245
old locus tag: LOZ86_21245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFVFWRVTVLIVLFALLGAAYVYMSATLENYTLIIRQGEQLIKFSGWYMVAELWPFVLPGILITGSAGGIALLWITVKADNRDQAEKIAHYHRLTSLAQENAVQAEFKANKRLAEQLDRAVQRENAATLREQKANALISAAQNQLENVIAEAQRQVDIAKEESSNAETRRKNATATAERRRRKLEKLKVEQENRELTEFFKS
SIO_010081: LOZ86_RS21245
subclass of: SO_0000673
so part of: LOZ86_RS21245
location: 2886..3497
location: region:2886-3497:1
so has part: feature:2886-3497:1:exon

WP_039318279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2886-3497:1:exon

LOZ86_RS21250
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21250
old locus tag: LOZ86_21250
so part of: sequence
location: complement(3600..3953)
location: region:3600-3953:-1
so has part: feature:3600-3953:-1:exon
subclass of: SO_0000010

position:3600:-1
position: 3600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3953:-1
position: 3953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3600-3953:-1:exon

LOZ86_RS21250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21250
old locus tag: LOZ86_21250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVIFCDTRQEGGAYGKARLADPALGGGGAAVFFSFGGFMTRLSSLSASEKQFIDAAVFAAERAKGARLSGPEKKKVLATARQQIISQRDANRISRQRHEAAQERLFEWKKPSGFRR
SIO_010081: LOZ86_RS21250
subclass of: SO_0000673
so part of: LOZ86_RS21250
location: complement(3600..3953)
location: region:3600-3953:-1
so has part: feature:3600-3953:-1:exon

WP_230243182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3600-3953:-1:exon

LOZ86_RS21255
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21255
old locus tag: LOZ86_21255
pseudo: true
so part of: sequence
location: 4138..4270
location: region:4138-4270:1
so has part: feature:4138-4270:1:exon
subclass of: SO_0000010

position:4138:1
position: 4138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4270:1
position: 4270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4138-4270:1:exon

LOZ86_RS21255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21255
old locus tag: LOZ86_21255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001314450.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: replication initiation protein
SIO_010081: LOZ86_RS21255
subclass of: SO_0000673
so part of: LOZ86_RS21255
location: 4138..4270
location: region:4138-4270:1
so has part: feature:4138-4270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4138-4270:1:exon

LOZ86_RS21260
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21260
old locus tag: LOZ86_21260
so part of: sequence
location: complement(4763..5173)
location: region:4763-5173:-1
so has part: feature:4763-5173:-1:exon
subclass of: SO_0000010

position:4763:-1
position: 4763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5173:-1
position: 5173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4763-5173:-1:exon

LOZ86_RS21260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21260
old locus tag: LOZ86_21260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKISVTFSNHCFTDKKGEGKTLMSGRYFSEARYQCSLNLPCILKDHLINGHIVPHFDRNSNEVYYYAHVFDYAIFFDLRQDTNNSGGLAMFVTSAYELDQWGKGSVPKGTAVKFDYISHLRLNGQTYLAKKMQKRR
SIO_010081: LOZ86_RS21260
subclass of: SO_0000673
so part of: LOZ86_RS21260
location: complement(4763..5173)
location: region:4763-5173:-1
so has part: feature:4763-5173:-1:exon

WP_146044100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4763-5173:-1:exon

LOZ86_RS21265
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21265
old locus tag: LOZ86_21265
so part of: sequence
location: 5747..5983
location: region:5747-5983:1
so has part: feature:5747-5983:1:exon
subclass of: SO_0000010

position:5747:1
position: 5747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5983:1
position: 5983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5747-5983:1:exon

LOZ86_RS21265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21265
old locus tag: LOZ86_21265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004249586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHPVGKHISKEQDHELNYWLKKQGFKESDSNRESLKSLIDAAKIGLDMSSNKHLEHTELDVYFEGVKSIWIDDFEEK
SIO_010081: LOZ86_RS21265
subclass of: SO_0000673
so part of: LOZ86_RS21265
location: 5747..5983
location: region:5747-5983:1
so has part: feature:5747-5983:1:exon

WP_103184882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5747-5983:1:exon

LOZ86_RS21270
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21270
old locus tag: LOZ86_21270
so part of: sequence
location: 6751..7101
location: region:6751-7101:1
so has part: feature:6751-7101:1:exon
subclass of: SO_0000010

position:6751:1
position: 6751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7101:1
position: 7101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6751-7101:1:exon

LOZ86_RS21270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21270
old locus tag: LOZ86_21270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MWEVITTECFDAWFLTQDDSLRESVYEAMGILEKFGPKLGRPYVDTLNGSDFPNMKELRVQHAGKPIRAFFAFDPTRKAIVLCAGDKTGINEKRFYRDMIRLADSEYLKHLANLEK
SIO_010081: LOZ86_RS21270
subclass of: SO_0000673
so part of: LOZ86_RS21270
location: 6751..7101
location: region:6751-7101:1
so has part: feature:6751-7101:1:exon

WP_039318317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6751-7101:1:exon

LOZ86_RS21275
type: Gene
subclass of: SO_0000704
RO_0002162: 2778550
locus tag: LOZ86_RS21275
old locus tag: LOZ86_21275
so part of: sequence
location: 7104..7403
location: region:7104-7403:1
so has part: feature:7104-7403:1:exon
subclass of: SO_0000010

position:7104:1
position: 7104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7403:1
position: 7403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7104-7403:1:exon

LOZ86_RS21275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2778550
locus tag: LOZ86_RS21275
old locus tag: LOZ86_21275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008806992.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MATYRELLEKESPEMQARVAARVEETSLVIALSQLRDELEISQTELARAIGISQPTLAKMENPENDPRLSTLKRYVAALGGELSIDVTLPTGKRVAFHL
SIO_010081: LOZ86_RS21275
subclass of: SO_0000673
so part of: LOZ86_RS21275
location: 7104..7403
location: region:7104-7403:1
so has part: feature:7104-7403:1:exon

WP_039318319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7104-7403:1:exon