Roseomonas haemaphysalidis strain 546 plasmid p546-6.
type: Entry
definition: Roseomonas haemaphysalidis strain 546 plasmid p546-6.
sequence version: NZ_CP061183.1
sequence date: 2023-02-11
sequence: sequence
division: CON
label: NZ_CP061183.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15936122
keyword: RefSeq
source: Roseomonas haemaphysalidis
organism: Roseomonas haemaphysalidis
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP061183.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT v. v5.1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/10/2023 23:50:16\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,580\nCDSs (total) :: 4,516\nGenes (coding) :: 4,480\nCDSs (with protein) :: 4,480\nGenes (RNA) :: 64\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 4\nPseudo Genes (total) :: 36\nCDSs (without protein) :: 36\nPseudo Genes (ambiguous residues) :: 0 of 36\nPseudo Genes (frameshifted) :: 15 of 36\nPseudo Genes (incomplete) :: 26 of 36\nPseudo Genes (internal stop) :: 7 of 36\nPseudo Genes (multiple problems) :: 10 of 36\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 26015
topology: linear
so has quality: SO_0000987
location: 1..26015
location: region:1-26015:1
RO_0002162: 2768162

NZ_CP061183
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15936122
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Zhu, W.
journal: Submitted (03-SEP-2020) National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, No. 155 Changbai Road, Changping District, Beijing 102206, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26015:1
position: 26015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26015:1:source
so part of: sequence
organism: Roseomonas haemaphysalidis
mol type: genomic DNA
strain: 546
host: tick
type material: type strain of Roseomonas haemaphysalidis
plasmid: p546-6
country: China: Jiangxi province
collection date: 2018-06

2768162
type: Taxonomy
SIO_000068: taxonomy

IAI59_RS22585
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22585
so part of: sequence
location: 202..576
location: region:202-576:1
so has part: feature:202-576:1:exon
subclass of: SO_0000010

position:202:1
position: 202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576:1
position: 576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202-576:1:exon

IAI59_RS22585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTARAFRSRPLASQKAGWWDPHEPREPYPPAPMALACAETQQAEQARAALMAAENARLSAVQTSAETEDALPPGHGREDTLACCTARHFTATIRRSGLSRERWDMLMGWTVEKQNRRWSRTCGW
SIO_010081: IAI59_RS22585
subclass of: SO_0000673
so part of: IAI59_RS22585
location: 202..576
location: region:202-576:1
so has part: feature:202-576:1:exon

WP_207444074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202-576:1:exon

IAI59_RS22590
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22590
so part of: sequence
location: 679..1578
location: region:679-1578:1
so has part: feature:679-1578:1:exon
subclass of: SO_0000010

position:679:1
position: 679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1578:1
position: 1578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679-1578:1:exon

IAI59_RS22590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012752403.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MTPEQLRVFVAVAERQHVTRAAEALHLAQSAASAAIAALEQRHGVPLFHRVGRGIELTEEGHAFLPEARAVLARIEAAELALAELGGLVRGTLPIMASQTVSGYWLPRHLVGFRRVYPGVTVRLSIGNTAQVAAAVRGGTAEIGFVEGALDDPELEGLTVATDQLLLVVGPDHPWVEAPPDTVTALAEAGAGDWVLRELGSGTRSAFEASLREAGLDPAALDVALELPSNEAVRAAVEAGMGATVISASVAAPSIEAGLLHHVTLPMPQRAFRAVWHRERRRSRAAGALLDLIHAPNPR
SIO_010081: IAI59_RS22590
subclass of: SO_0000673
so part of: IAI59_RS22590
location: 679..1578
location: region:679-1578:1
so has part: feature:679-1578:1:exon

WP_207419988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:679-1578:1:exon

IAI59_RS22595
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22595
so part of: sequence
location: complement(1596..2687)
location: region:1596-2687:-1
so has part: feature:1596-2687:-1:exon
subclass of: SO_0000010

position:1596:-1
position: 1596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2687:-1
position: 2687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596-2687:-1:exon

IAI59_RS22595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017504174.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative sulfate exporter family transporter
translation: MPQPRAAIVPAANSPFPIRVLPGVALCVAVTLAALALEHAEAALFGRAWLEALVLAILIGTAVRTAWPPGAHWRPGIEFSAKTLLEVAVVLLGASVSAATVLAIGPWMLLGIAGVVAVAILASYGIGRLLGLPVRMALLVACGNSICGNSAIAAVAPVIGADGDDVAASIAFTAVLGVMAVLGLPLLAPLLGLTGHQYGVLAGLTVYAVPQVLAATAPIAAIAVQVGTLVKLVRVLMLGPVVLTLSLLAPRLREETDEPAPHVTAGDRPKAGRLPLHRLLPWFILGFLAMIALRSLGAIPDALLPPLATAATALTVVSMAALGLGVDVRVVARAGGPVTAAVVLSLVVLGAISLGLIRLLGVA
SIO_010081: IAI59_RS22595
subclass of: SO_0000673
so part of: IAI59_RS22595
location: complement(1596..2687)
location: region:1596-2687:-1
so has part: feature:1596-2687:-1:exon

WP_237181262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1596-2687:-1:exon

IAI59_RS22600
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22600
so part of: sequence
location: complement(2837..3370)
location: region:2837-3370:-1
so has part: feature:2837-3370:-1:exon
subclass of: SO_0000010

position:2837:-1
position: 2837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370:-1
position: 3370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2837-3370:-1:exon

IAI59_RS22600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489858.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4142 domain-containing protein
translation: MNKLLIAAIALAMGMAPPVSAQSVGERTGLNALVGVSSSTDDFVREAAIGDMFETVSSELAAIRGNVPIRAFAARMNEAHQKSSAELTLLVRRHAGGTTIPPTMDGSRQAMLARLRGLMGDEFNRQYREDQLTAHRDAISLFQRYAENGDNPQLRAWARNLLPVLREHLRMAEALGH
SIO_010081: IAI59_RS22600
subclass of: SO_0000673
so part of: IAI59_RS22600
location: complement(2837..3370)
location: region:2837-3370:-1
so has part: feature:2837-3370:-1:exon

WP_207444076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2837-3370:-1:exon

IAI59_RS22605
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22605
so part of: sequence
location: complement(3409..4470)
location: region:3409-4470:-1
so has part: feature:3409-4470:-1:exon
subclass of: SO_0000010

position:3409:-1
position: 3409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4470:-1
position: 4470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3409-4470:-1:exon

IAI59_RS22605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019996268.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MIVHRGYPLNAEPRGSALRAAFITPERDFYIRSHGTIPELRAEDYRLRLGGQGLPTQELSLNDLRSRFPQRRVTAVLQCAGNRRADMGLVKHVSGDAWQAGAISNAEWGGVSLGDVLRAAGARERADLHVAFDSHDEIEEEGERFRYGASIPLAKAMSPETLLAFTMNGEPLTARHGFPLRVVTPGYAGVRSPKWLAAITVQDRPSDNHIQAKLYMMLPPDMTKLTEDLSRGVVINDMPLTSAILEPSAGARLPAGDARVRGYAIATGQPIARVEVSADGGRQWMQATVEQHADAPWSWTFWNAALNLPRGEHELVVRAVDGAGRVQPATAEEIWNFPGYLCTAWHRISVTVG
SIO_010081: IAI59_RS22605
subclass of: SO_0000673
so part of: IAI59_RS22605
location: complement(3409..4470)
location: region:3409-4470:-1
so has part: feature:3409-4470:-1:exon

WP_207420007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3409-4470:-1:exon

IAI59_RS22610
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22610
so part of: sequence
location: complement(4805..5608)
location: region:4805-5608:-1
so has part: feature:4805-5608:-1:exon
subclass of: SO_0000010

position:4805:-1
position: 4805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5608:-1
position: 5608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4805-5608:-1:exon

IAI59_RS22610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22610
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MLILAVVPEPGTARACLEHAALARAAVDDARLVVLHPNADPERLIAAAEEVAIQELREAREGSAVSRTAAVRTVFDEWVAASPGGGEAEWRERPGAIGEVVAAAAAGAALVVLARPRNLDGQDALHEAVFHAGPPLLLVPDAPPPAALAHLALAWEPEDAARRALAAALPWLRRATEVTVLVAGGEGDRPDASEAAERLGEAGVGANVLPLEGGGPVGAALLGACGRIGADALVMGSYDRPAVLEWLFGGATRDVLRDATLPVFLHR
SIO_010081: IAI59_RS22610
subclass of: SO_0000673
so part of: IAI59_RS22610
location: complement(4805..5608)
location: region:4805-5608:-1
so has part: feature:4805-5608:-1:exon

WP_207419990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4805-5608:-1:exon

IAI59_RS22615
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22615
so part of: sequence
location: complement(5648..6037)
location: region:5648-6037:-1
so has part: feature:5648-6037:-1:exon
subclass of: SO_0000010

position:5648:-1
position: 5648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6037:-1
position: 6037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5648-6037:-1:exon

IAI59_RS22615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013950454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MSFQNFCYGMVAVAGISLALSGKSPPAPPAPYPPTPEALRFAAAEAAYPFHNASIELPAGDRQFQGSGSEVANTNCLSCHSAGMVLNQPPLSRAVWEEEVRKMRTAYHAPVAEADVEPIAEYLASLPRP
SIO_010081: IAI59_RS22615
subclass of: SO_0000673
so part of: IAI59_RS22615
location: complement(5648..6037)
location: region:5648-6037:-1
so has part: feature:5648-6037:-1:exon

WP_207419991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5648-6037:-1:exon

IAI59_RS22620
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22620
so part of: sequence
location: complement(6049..7254)
location: region:6049-7254:-1
so has part: feature:6049-7254:-1:exon
subclass of: SO_0000010

position:6049:-1
position: 6049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7254:-1
position: 7254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6049-7254:-1:exon

IAI59_RS22620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018913166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MTSSRRHLLGGAAALAATWVSGARAAEVDLNLPGGGGVRPLITDYPQKGAMILQRTRPPLLETPFEVFDEGTFTPNNRFYVRWHWAVIPTEVDVNAFRLEVKGHVNAPLSLTLRELYNLPRVELAAVNQCSGNSRGLFQPRVPGAQWGNGAMGNAKWVGVRLRDVLDRAGVQAGATVVRFGALDQPVVQEGPDFMKSLALDHARDGEVMIAYLMNGEPMTLNHGFPIRLIVPGWFSTYWVKALNSIEVLDGPDENYWMKTAYRIPDTPGANVRPGQTGFGTVPINRMVPRSFVTNLRDGAGLPMGAPTPLRGIAFGGSTGVRAVDVSTDGGASWQPATLGPDEGKYGFRRWEAGFTPTARGEARIMVRCTNNDGLAQPAEPNWNGGGYMRNGIETTSVRIG
SIO_010081: IAI59_RS22620
subclass of: SO_0000673
so part of: IAI59_RS22620
location: complement(6049..7254)
location: region:6049-7254:-1
so has part: feature:6049-7254:-1:exon

WP_207419992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6049-7254:-1:exon

IAI59_RS22625
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22625
so part of: sequence
location: 7476..8024
location: region:7476-8024:1
so has part: feature:7476-8024:1:exon
subclass of: SO_0000010

position:7476:1
position: 7476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8024:1
position: 8024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7476-8024:1:exon

IAI59_RS22625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIEAPAEPRTIREVVGLFDTYPALERAVDELLTSGFARCELSLLAEAGAASGKTSVELADDPAAPHTDHFCTEALGNAEGSLIGGFAIIPAMSGGGVAAAAGATTLAATGVAAATGGFGAVLGTLLAVMLARRRATDQAQQTVEGGQLLWVRTRSPELERRTLDILERNAAHHVHAHDLPV
SIO_010081: IAI59_RS22625
subclass of: SO_0000673
so part of: IAI59_RS22625
location: 7476..8024
location: region:7476-8024:1
so has part: feature:7476-8024:1:exon

WP_207419993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7476-8024:1:exon

IAI59_RS22630
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22630
so part of: sequence
location: complement(8342..9331)
location: region:8342-9331:-1
so has part: feature:8342-9331:-1:exon
subclass of: SO_0000010

position:8342:-1
position: 8342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9331:-1
position: 9331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8342-9331:-1:exon

IAI59_RS22630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010682477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YncE family protein
translation: MTTRLARPRALLLAAGFLLAAALPALAAGFDGSIKNNSLALSPDEGTAVVSYSDDPVVIVYDMAAGRVRQRLEGFTTPRNIVFSPDGARFYVSDSGTGRVSVFETATLRQVDTLAAGAGAFGTTLSRDGARLYVNNQAASTVSVFDTRSGRAEAVVTGLAQPRQGVRLSPDGGTLFVTNFLGDKITLIDTATNRITGEITGFDKLRAISVTADGGTIYAANSGRNTVSVVDVAARRIAAEVPVGRDPYGAALTPDGRYVYSGNLQDNSLSVIDTGTRAVVATVTGLQEPRQAIVFSRDGARAYVLNRDLGIAVVDRAGNRVARTLSPGG
SIO_010081: IAI59_RS22630
subclass of: SO_0000673
so part of: IAI59_RS22630
location: complement(8342..9331)
location: region:8342-9331:-1
so has part: feature:8342-9331:-1:exon

WP_207419994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8342-9331:-1:exon

IAI59_RS22635
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22635
so part of: sequence
location: complement(9351..10217)
location: region:9351-10217:-1
so has part: feature:9351-10217:-1:exon
subclass of: SO_0000010

position:9351:-1
position: 9351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10217:-1
position: 10217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9351-10217:-1:exon

IAI59_RS22635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma factor
translation: MTHDPTPIGSFPVTEDDLQAWIDVRLPSGRQRDIEAWLEANPEAAARCRAMAAEREALRAALRPSHDAPIPARLRVAHIQAQQDHARAQGWRRTAAVLAWVMLGAGLGWAGHGLVPAGAPRPVVAQARPRPMVAEAIAAHLVFVADARRPVEVAAQQEDLLLRWLSNRLSRPVSTPNLAAQGYRLMGGRLLPGAGGDPAAQLMYEDAAGARLTLYLRADRAEEGETAFRFTDDAAGGVSGFWWVDRGFGYAVLAQGIDRPALLGLAEAVHRQVLTTPTAPNGRPAPNL
SIO_010081: IAI59_RS22635
subclass of: SO_0000673
so part of: IAI59_RS22635
location: complement(9351..10217)
location: region:9351-10217:-1
so has part: feature:9351-10217:-1:exon

WP_207419995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9351-10217:-1:exon

IAI59_RS22640
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22640
so part of: sequence
location: complement(10214..10762)
location: region:10214-10762:-1
so has part: feature:10214-10762:-1:exon
subclass of: SO_0000010

position:10214:-1
position: 10214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10762:-1
position: 10762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10214-10762:-1:exon

IAI59_RS22640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003601603.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MFGRGRAADTADAIERHIPALRRFAWALLRDGAAADDLVQDCLERALSRWHLRRAEGDLRAWLFTILHNLFLNGRRGAGRRGKVVPVEGDTGEAFADEAAGTAAESLLVWRDALAGLAALPEEQRVVLLLVGVEDFSYEETARLLGVPPGTVMSRLSRGRARLHRLIEGEDAPARPALRRVK
SIO_010081: IAI59_RS22640
subclass of: SO_0000673
so part of: IAI59_RS22640
location: complement(10214..10762)
location: region:10214-10762:-1
so has part: feature:10214-10762:-1:exon

WP_207419996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10214-10762:-1:exon

IAI59_RS22645
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22645
so part of: sequence
location: complement(10771..11244)
location: region:10771-11244:-1
so has part: feature:10771-11244:-1:exon
subclass of: SO_0000010

position:10771:-1
position: 10771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11244:-1
position: 11244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10771-11244:-1:exon

IAI59_RS22645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013165816.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MRGILPMLYPRRRSLGLLAMGALVLGTGCATLPSPAQAGPAADVAQRRIAAIAAGDTAAVMGSYADNAVMEWVGGPLDGRYAGQAAIGGVWGKFIAAQGPMQTRVGQVLESANPRGQTVVADVAFAGRMTVKVRYVMTYREGRLVSETWQVDPNVPG
SIO_010081: IAI59_RS22645
subclass of: SO_0000673
so part of: IAI59_RS22645
location: complement(10771..11244)
location: region:10771-11244:-1
so has part: feature:10771-11244:-1:exon

WP_237181082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10771-11244:-1:exon

IAI59_RS23420
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS23420
so part of: sequence
location: complement(11392..11727)
location: region:11392-11727:-1
so has part: feature:11392-11727:-1:exon
subclass of: SO_0000010

position:11392:-1
position: 11392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11727:-1
position: 11727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11392-11727:-1:exon

IAI59_RS23420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS23420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015328675.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MAVRQRVTGCGAVHGVDRRNPWGRYADWGGRDRWPGRERHPVRRRGLEQDHRRIKRLVRPGFGFGSFWTARRTLAGYEVMAMVRKEQVRKIGGRDIRAQATFVAELFGVAA
SIO_010081: IAI59_RS23420
subclass of: SO_0000673
so part of: IAI59_RS23420
location: complement(11392..11727)
location: region:11392-11727:-1
so has part: feature:11392-11727:-1:exon

WP_207420009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11392-11727:-1:exon

IAI59_RS22655
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22655
so part of: sequence
location: complement(12129..12590)
location: region:12129-12590:-1
so has part: feature:12129-12590:-1:exon
subclass of: SO_0000010

position:12129:-1
position: 12129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12590:-1
position: 12590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12129-12590:-1:exon

IAI59_RS22655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22655
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEAARKLERRTHQPGLHGGALRRTGILVLWTLLYRGPSKHGVCDPSIGQLAEWSGCARSTVQAALGRIEAAGIMGHVRRGIMVTLRGAARWCQWTNAYLFASVERWHSDTESRSAQVSLEKKKAQERGRRGEGSTLTPAEQVALAAKWGLDIA
SIO_010081: IAI59_RS22655
subclass of: SO_0000673
so part of: IAI59_RS22655
location: complement(12129..12590)
location: region:12129-12590:-1
so has part: feature:12129-12590:-1:exon

WP_207419997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12129-12590:-1:exon

IAI59_RS22665
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22665
so part of: sequence
location: complement(13219..13848)
location: region:13219-13848:-1
so has part: feature:13219-13848:-1:exon
subclass of: SO_0000010

position:13219:-1
position: 13219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13848:-1
position: 13848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13219-13848:-1:exon

IAI59_RS22665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22665
inference: COORDINATES: protein motif:HMM:NF018691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MRTIVVASQKGGVGKTTLTGHLAVEAERQGVGPVAMIDTDPQANLSGWFGVREAETPVLVRLLPGGLRATLSALADAGIALCLIDTPPAITESIAATVGEADLVLIPAKPSPHDLRAVGATVDIVEKAKKPMIFVVNQAVSRSKLKVDAVRALSQHGPLAPVDVHNRVDFAASMTDGRTACEVDAKSPAAEEIHQLWAYIATRLDRVTK
SIO_010081: IAI59_RS22665
subclass of: SO_0000673
so part of: IAI59_RS22665
location: complement(13219..13848)
location: region:13219-13848:-1
so has part: feature:13219-13848:-1:exon

WP_207419999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13219-13848:-1:exon

IAI59_RS22670
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22670
so part of: sequence
location: 14316..15932
location: region:14316-15932:1
so has part: feature:14316-15932:1:exon
subclass of: SO_0000010

position:14316:1
position: 14316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15932:1
position: 15932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14316-15932:1:exon

IAI59_RS22670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22670
inference: COORDINATES: protein motif:HMM:NF020452.2
GO function: GO:0004518 - nuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dsDNA nuclease domain-containing protein
translation: MPDPLIGPTSSDAGGIAARRGFRVQDHVAARLALEMLQDPDIEQLECETADDIILRRRHEGEAVNEYIQVKTTEADKKWSITELSARDNSRKGSSVCEKSLLSDQFDGTAWFRFVTTRAVSTNLSPFLQPRSKRSGSAELDALVSSFRKRYPDVKSKSGLGLGEWAERMFWEVEGEERSLLARNINEMLRLAAGRGPTPAYQLMTDTYGTLVDKVRLMGDASTTSPREKVWTRAECIGWWEDRLRRMREAASSTVKVYQIASRSPFFSELARIDETSIRRALYAFDVEYDDGQWRRGELIEHLLDWLPEMTLPASTLAGINHLTARQLPAQALKALERHGVADIPQVVAAVMLHAILRHHFEAEPIACRIFFRVSGGVRATSAHIVQSADAEEIWLGRSKLITAATHREVVDEVLRELQTALSRDVLVEEREIIVQLREPHHLRADRLAPVLDAMAKTSDLLRVLRLPLLIAYDSATLSPGFAPDYVDHLRAEVDAEYTRIKSQLGSELERVEVAMFLVPIECADTLAVEFEKRLRRA
SIO_010081: IAI59_RS22670
subclass of: SO_0000673
so part of: IAI59_RS22670
location: 14316..15932
location: region:14316-15932:1
so has part: feature:14316-15932:1:exon

WP_207420000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14316-15932:1:exon

IAI59_RS22675
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22675
so part of: sequence
location: 15933..18122
location: region:15933-18122:1
so has part: feature:15933-18122:1:exon
subclass of: SO_0000010

position:15933:1
position: 15933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18122:1
position: 18122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15933-18122:1:exon

IAI59_RS22675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22675
inference: COORDINATES: protein motif:HMM:NF012492.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MDAETIRKHLSHRDAFIENRFAILNALVRMANDERNAVVARELVIRTLALRTALDAGYDELLDSLVRQVGLYPYVDQNRPRSFEDQLVIEAHRVPGLKGDRLFHSLQLSVFQELVGGRNVVLSAPTSVGKSLVIDAVLTTKRHKRAVIIVPTIALIDETRRRINYSLGKSHDIITHPGQRRLDDGRPTVYVLTQERALSRKDLDGVDFFVIDEFYKLDLRGGETDERAVDLNLCFHRFARQGAQFYLIGPNIADVRGLASEYRHVFLPSTFSTVALDIVHFDLKKNAPERAGKLVELCRGFTSPTLVYCQSPRSAREAAKLIYTECDLPMVETTRDAVEWLERNFPSEWEVIQALRRGVGIHHGNVPRALQQYMVRAFEDGHIKFLICTSTMIEGVNTVAENVIIFDRRRGNNKTIDDFTFRNIAGRAGRMNRYFIGKVYVLEGAVDEGDHVVDLPIEKQDDTTPLSLLLDLPNDSLTRYSQGRLTEVFSGSKLSEATIRQNRYVPISTQNALFDAIDELHNRNPALFTWRGMPDSEQLLAVCDLIFDLVDQGSGLRRHGIFKGSQLQAVLTGLMAAPDFGSFIRRRVDERWEGQSVSDAVEHALAFLRNYVGYTFGRQLMAVSRIQADVLSRFKGSRPGDYSLLAARAESLFLPAGLYALDEYGVPAEVALKLMRLTGPIDDVDQGLRMLASVALDKIDLMPFERNIIESVRRSLPPRAFLSADDVAE
SIO_010081: IAI59_RS22675
subclass of: SO_0000673
so part of: IAI59_RS22675
location: 15933..18122
location: region:15933-18122:1
so has part: feature:15933-18122:1:exon

WP_207420001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15933-18122:1:exon

IAI59_RS22680
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22680
pseudo: true
so part of: sequence
location: <18146..18329
location: region:18146-18329:1
so has part: feature:18146-18329:1:exon
subclass of: SO_0000010

position:18146:1
position: 18146
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:18329:1
position: 18329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18146-18329:1:exon

IAI59_RS22680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007558530.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: IAI59_RS22680
subclass of: SO_0000673
so part of: IAI59_RS22680
location: <18146..18329
location: region:18146-18329:1
so has part: feature:18146-18329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18146-18329:1:exon

IAI59_RS22685
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22685
so part of: sequence
location: 18492..19091
location: region:18492-19091:1
so has part: feature:18492-19091:1:exon
subclass of: SO_0000010

position:18492:1
position: 18492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19091:1
position: 19091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18492-19091:1:exon

IAI59_RS22685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008492067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MITSTRATPAAAVSTLSDAAALAIQAHQGQVRKGTSIPYVSHLFAVAGLVMEFGGDEEQACAALLHDLIEDCGAEYEAVILERFGPRVASIVRSCTDADTQPKPPWRARKEAYLAHLEEVDADAALISACDKLHNARAIVADIQAHGADAVFSRFKGGRDGTLWYYAGVSEILSRRLDGALPKALAHAVAELQAAAGEA
SIO_010081: IAI59_RS22685
subclass of: SO_0000673
so part of: IAI59_RS22685
location: 18492..19091
location: region:18492-19091:1
so has part: feature:18492-19091:1:exon

WP_237181084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18492-19091:1:exon

IAI59_RS22690
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22690
so part of: sequence
location: 19160..19552
location: region:19160-19552:1
so has part: feature:19160-19552:1:exon
subclass of: SO_0000010

position:19160:1
position: 19160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19552:1
position: 19552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19160-19552:1:exon

IAI59_RS22690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPALADRNTFTVSDEAGTDPQWTVTAAVLQRVHQRLKQAGGTLPVWAIMDEDTYETFFGDGFYLHLRAIAWSANDAEQMLQQMPSEHMTSWHLRSYTLGVHNDRPALLHPWPKSEEFYLAQLLRLVAETA
SIO_010081: IAI59_RS22690
subclass of: SO_0000673
so part of: IAI59_RS22690
location: 19160..19552
location: region:19160-19552:1
so has part: feature:19160-19552:1:exon

WP_207420002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19160-19552:1:exon

IAI59_RS22695
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22695
so part of: sequence
location: complement(19644..20513)
location: region:19644-20513:-1
so has part: feature:19644-20513:-1:exon
subclass of: SO_0000010

position:19644:-1
position: 19644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20513:-1
position: 20513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19644-20513:-1:exon

IAI59_RS22695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22695
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MEPDPAARLSRPQVLAFIAALREGRSWRTVTSLLSHLAMAAAVMFGEQDWRWLKRLNSQARQRVTPSDRKLGRLVSPRQLLELGQTLMAEADQVNGATTAALRHRDGLMIALLALRPLRRRNLMRLTLGTQLRQQDGRWDILIAGEQTKNHRPIELPFPAILVPALEHYLAVHRPTLLARGAAAEASLWIGNTGRPLAELRAWQVITSHTRERLGVSVNPHLFRDCAASFLGEVDPEHVRMAAPLLGHASYATTERHYILAQSRTALTQYQALLESLRRPPRQGHRSSR
SIO_010081: IAI59_RS22695
subclass of: SO_0000673
so part of: IAI59_RS22695
location: complement(19644..20513)
location: region:19644-20513:-1
so has part: feature:19644-20513:-1:exon

WP_207420003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19644-20513:-1:exon

IAI59_RS22700
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22700
so part of: sequence
location: complement(20781..22517)
location: region:20781-22517:-1
so has part: feature:20781-22517:-1:exon
subclass of: SO_0000010

position:20781:-1
position: 20781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22517:-1
position: 22517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20781-22517:-1:exon

IAI59_RS22700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22700
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSTETLLAAPAFAPRPTTLAELRRHVLANPTLPLRRQRDLASALNSLAKASGQRLEAIAATPEAVRALFGSMTPAQMGHRPSRWRNIRSLVGAALATAGQISVPARINQPASPAWEALLGLLTSRDTRYRMGRFARYCTGQGIAPEQVDDAVLLAFGAALQAGSLVAEPARCQRETAVQWNRAADSTPAWPQRRLEVLDRRLYYTPSWDTYPASLLQEVEVWIGRLSDGGLDELDYETALAQPLRPTTLKNRRALLRLYLGSLVLTGMDPAEMLDFRSVVTSSRALQGLTFFYKRGDSKPRHQVAEIARLLIGIARHHLKLPEDDLRRLRTMASKVTPDKRGMTERNRDRLLPLKNDQTLQRVLNLPEVLCGEVEQHARKLGAANTALARQWQSALLIDLLLKVPMRLANLAGLRLDTHLLRLPRGGDSFLMLGETETKNGQPLEARLPASTAQMLDRYLAVYRPLLLGEQASAWLFPGRTVGSRKSHDALRHQITGTLAERCGVAMHPHLFRHLAGMVILRRNPAAHGLVQRTLGHKQLSSTMGFYTGMETTQAIEHYQDTLLALSQAGPSALRPRR
SIO_010081: IAI59_RS22700
subclass of: SO_0000673
so part of: IAI59_RS22700
location: complement(20781..22517)
location: region:20781-22517:-1
so has part: feature:20781-22517:-1:exon

WP_207420004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20781-22517:-1:exon

IAI59_RS22705
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22705
so part of: sequence
location: complement(22727..22903)
location: region:22727-22903:-1
so has part: feature:22727-22903:-1:exon
subclass of: SO_0000010

position:22727:-1
position: 22727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22903:-1
position: 22903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22727-22903:-1:exon

IAI59_RS22705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22705
inference: COORDINATES: protein motif:HMM:NF024139.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MPRRSPMLTVDQVAEHLAISTKTVRRWIADGRLNAHQIGRQLRISERDLQVFVAQQRR
SIO_010081: IAI59_RS22705
subclass of: SO_0000673
so part of: IAI59_RS22705
location: complement(22727..22903)
location: region:22727-22903:-1
so has part: feature:22727-22903:-1:exon

WP_207420005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22727-22903:-1:exon

IAI59_RS22710
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22710
so part of: sequence
location: complement(23948..25816)
location: region:23948-25816:-1
so has part: feature:23948-25816:-1:exon
subclass of: SO_0000010

position:23948:-1
position: 23948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25816:-1
position: 25816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23948-25816:-1:exon

IAI59_RS22710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006726528.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: voltage-gated chloride channel family protein
translation: MTPSAFLGERLRHFGLAAKWLAIILPVAATVGTLCAAFLWTLDRVTAIRFDNPALLFALPLAGVAVGLVYHWVGRPAEGGNNLIVEQIHQPGGGVPLRMAPLILVSTIVSHLFGASVGREGTAVQVGGSIAGGVAKALFLKPDEVRILLMVGIAAGFGAVFGTPIAGAVFALEVLTVGQVEYTALVPAVLAAIVADYTCHAWGVTHIAYHLGFAGYAEAGVTAFHIDPVLLAKVAVAGVAFGLCSLLFSELAHRVGGLAKRLCPVAWLRPAIGGVLIIALVYATGSRDYIGLGVISPEPGGASIMNFFGPAHYGWAWVWKIAFTVLALATGFKGGEVTPLFFVGAALGNALSAPLNAPVDLMAALGFVALFAGAANTPLACTLMGIELFGAANTAYIATACFVAYLCSGHSGIYLSQRIGVPKTRIPRLPPDASLRHARDLHPVLWKWRSPSAGAAADGTKLTPAISRTAQDDTPMHTAHDLTSKEIGMIWIYMKPREKYRRHAGIRGALSSRPLFRELVLRAKQAGLVNATAHHTHFGFSNHGAVQEPMAEISNPELTMCVEMIGPRDTLERFCRDHGAMLENKVIVYKHLEHWHVSGGGGGAVRLQEEAVANPGELLAPQ
SIO_010081: IAI59_RS22710
subclass of: SO_0000673
so part of: IAI59_RS22710
location: complement(23948..25816)
location: region:23948-25816:-1
so has part: feature:23948-25816:-1:exon

WP_207444078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23948-25816:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 2768162
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01734
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: fluoride
so part of: sequence
location: complement(25920..26002)
location: region:25920-26002:-1
so has part: feature:25920-26002:-1:region

position:25920:-1
position: 25920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26002:-1
position: 26002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25920-26002:-1:region