Roseomonas haemaphysalidis strain 546 plasmid p546-5.
type: Entry
definition: Roseomonas haemaphysalidis strain 546 plasmid p546-5.
sequence version: NZ_CP061182.1
sequence date: 2023-02-11
sequence: sequence
division: CON
label: NZ_CP061182.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15936122
keyword: RefSeq
source: Roseomonas haemaphysalidis
organism: Roseomonas haemaphysalidis
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP061182.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT v. v5.1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/10/2023 23:50:16\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,580\nCDSs (total) :: 4,516\nGenes (coding) :: 4,480\nCDSs (with protein) :: 4,480\nGenes (RNA) :: 64\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 4\nPseudo Genes (total) :: 36\nCDSs (without protein) :: 36\nPseudo Genes (ambiguous residues) :: 0 of 36\nPseudo Genes (frameshifted) :: 15 of 36\nPseudo Genes (incomplete) :: 26 of 36\nPseudo Genes (internal stop) :: 7 of 36\nPseudo Genes (multiple problems) :: 10 of 36\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 39905
topology: linear
so has quality: SO_0000987
location: 1..39905
location: region:1-39905:1
RO_0002162: 2768162

NZ_CP061182
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15936122
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Zhu, W.
journal: Submitted (03-SEP-2020) National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, No. 155 Changbai Road, Changping District, Beijing 102206, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:39905:1
position: 39905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

feature:1-39905:1:source
so part of: sequence
organism: Roseomonas haemaphysalidis
mol type: genomic DNA
strain: 546
host: tick
type material: type strain of Roseomonas haemaphysalidis
plasmid: p546-5
country: China: Jiangxi province
collection date: 2018-06

2768162
type: Taxonomy
SIO_000068: taxonomy

IAI59_RS22420
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
gene: istB
locus tag: IAI59_RS22420
so part of: sequence
location: <1..682
location: region:1-682:1
so has part: feature:1-682:1:exon
subclass of: SO_0000010

position:682:1
position: 682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-682:1:exon

IAI59_RS22420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
gene: istB
locus tag: IAI59_RS22420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330531.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 2
transl table: 11
product: IS21-like element helper ATPase IstB
translation: GMKAAYDELLSTALKRQYPAQQLVGTLLEAEITEKQARSIRYQVGVAKLPLIKEIAEFDFADTPINEGLVREMATGAFLDDQRNAVLVGGTGTGKTHLAVAIALSCIRLGRRARFYTVIDLVNRLEAEARAGKTGRLAEQLTRLDLVVLDELGYLPFAQSGGQLLFHLISRLYEQTSILVTTNLLFAEWPTVFNDAKMTTALLDRLTHHCDIIETGNASWRFRNRN
SIO_010081: IAI59_RS22420
subclass of: SO_0000673
so part of: IAI59_RS22420
location: <1..682
location: region:1-682:1
so has part: feature:1-682:1:exon

WP_207444058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-682:1:exon

IAI59_RS22425
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22425
so part of: sequence
location: 786..1379
location: region:786-1379:1
so has part: feature:786-1379:1:exon
subclass of: SO_0000010

position:786:1
position: 786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379:1
position: 1379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786-1379:1:exon

IAI59_RS22425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22425
inference: COORDINATES: protein motif:HMM:NF017116.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VapE family protein
translation: MQHLNGKWLIEVAELSALGKAEAATLKAFITRREERYRPSYGRHEVHEPRQCVFIGTTNKAAYLRDETGGRRFWPVRVGTIDVQALTADRDQLFAEAVQLYQQGASWWPTAEFEATHIRPQQEARYEADVWEEVIKAYLSDKERVTVLELAKEALGYSVDRVGTADQRRLTALLEHLGWEHAPRGHGGVRYWRPRPQ
SIO_010081: IAI59_RS22425
subclass of: SO_0000673
so part of: IAI59_RS22425
location: 786..1379
location: region:786-1379:1
so has part: feature:786-1379:1:exon

WP_207419905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:786-1379:1:exon

IAI59_RS22430
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22430
so part of: sequence
location: 1804..3525
location: region:1804-3525:1
so has part: feature:1804-3525:1:exon
subclass of: SO_0000010

position:1804:1
position: 1804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3525:1
position: 3525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804-3525:1:exon

IAI59_RS22430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22430
inference: COORDINATES: protein motif:HMM:NF024880.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MSWDWYENHAAAVVPQYEAAEPAVLHAWLADLLPAQPAAILDIGAGSGRDAAWLAAQGHDVVAAEPAAAMRAEALQRHPEPRIRWVADALPELTGVLQAGLSFAVILVSAVWQHLHPSHRPRAFRKLVSLLQPGGLLALTLRHGPAETDRGMHPVSLEEIEALARDHGLAVIRRVAQADSLGRPEVSWTGVALRLPDDGTGALPLLRHVILNDQKQSSYKLGLLRVLCRAADGAAGLAQPASDAEVVLPLGLIALHWLRLYAPLVQAGLPQGPGNQGPDGLSFAGPGFLALLSGALPLAELRIGTRCSGAAAQALHTALKEAARTVAVMPARFMTYPNGGPILPVERGRPGAAPSALLVDAAYLRSFGSLRVPLHLWRALQRFSAWVEPALVAEWSRLMGDYARRMGRALDPGQVAQAMVWAEPERDVALSRRLALQQLQRGQPLHCVWTGKVLTADSLDIDHLFPWSAWPCGDLWNLLPAHRVVNQRLKRDRLPAAVTLAQAEERIQSWWQAAYLAPADPLLPGRFVQEARASLPRLGETTANPRLPEAVFAAVGLQRLRLHHDQQVPEWIA
SIO_010081: IAI59_RS22430
subclass of: SO_0000673
so part of: IAI59_RS22430
location: 1804..3525
location: region:1804-3525:1
so has part: feature:1804-3525:1:exon

WP_207419906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1804-3525:1:exon

IAI59_RS22435
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22435
so part of: sequence
location: complement(3769..4485)
location: region:3769-4485:-1
so has part: feature:3769-4485:-1:exon
subclass of: SO_0000010

position:3769:-1
position: 3769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4485:-1
position: 4485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3769-4485:-1:exon

IAI59_RS22435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLGAAGMGEQGKRYEAWLMLEVALAFRNRGHQATWITCHVGGPPRKALFRGSPGSMKKCGVTVDAPGYIQLINNGRHYELHNSIQFRGVSGALHEVDLSIIPARVGNGLRAAGGGYPDGKPCVALELKRFKLTGSFSIGLMRAMLLAAVDLSLELYPSAPKTSFDIAHISPTGVFACGELRESAWIAVTTVANIGASQRLAARYGASVEATFQVDIRQVAGTNTRVGILVDQLLQYL
SIO_010081: IAI59_RS22435
subclass of: SO_0000673
so part of: IAI59_RS22435
location: complement(3769..4485)
location: region:3769-4485:-1
so has part: feature:3769-4485:-1:exon

WP_207444060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3769-4485:-1:exon

IAI59_RS22440
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
gene: mcrC
locus tag: IAI59_RS22440
so part of: sequence
location: complement(5269..6324)
location: region:5269-6324:-1
so has part: feature:5269-6324:-1:exon
subclass of: SO_0000010

position:5269:-1
position: 5269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6324:-1
position: 6324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5269-6324:-1:exon

IAI59_RS22440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
gene: mcrC
locus tag: IAI59_RS22440
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF007277.0
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-methylcytosine-specific restriction endonuclease system specificity protein McrC
translation: MAPSSPIPIQNLYYLFLYAWDRFPEGQAIEVAATDSPDLVDLFAKVLSNGVRRLLRRGLDRHYLELEEETASPRGRFLLSETFKRSTLIRGRAVCAFDELSADIPHNQVLKATLRTLAAREGLDPKQAQALRTLHRQMAGVSDRPLTRALFQRVQLGRNNRHYDLLLRICSLILDSLLPGEGAGRTRFADILEDEAKMSTVFEAFVRNFYRSEQTAFQVGADHLTWDANSEDPNHARFLPAMRTDVTLRSPERTIVLDAKFYKTTLAQYRGGTDKVRSGHLYQLLTYLRHIHPRGQPAEQVEGILLYPRTSTQDLRLDYRIAGHRVRIHTLALDRPWQEIEQCLLNMVSRV
SIO_010081: IAI59_RS22440
subclass of: SO_0000673
so part of: IAI59_RS22440
location: complement(5269..6324)
location: region:5269-6324:-1
so has part: feature:5269-6324:-1:exon

WP_207419908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5269-6324:-1:exon

IAI59_RS22445
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22445
so part of: sequence
location: complement(6337..9174)
location: region:6337-9174:-1
so has part: feature:6337-9174:-1:exon
subclass of: SO_0000010

position:6337:-1
position: 6337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9174:-1
position: 9174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6337-9174:-1:exon

IAI59_RS22445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22445
inference: COORDINATES: protein motif:HMM:NF023524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3578 domain-containing protein
translation: MDRITRTDIELLRHSRSRPRYKDLSPEELQAYQRITTALQHLAGVAVEALGGSQQFDAKLTSGYSVAAGVRGALPKDLWFGAFNRRNLGGFVGMPQVFAIVSGSGIELGLAATIHPSDFSTKVIKDAARAAAPKIFRALPAPGSAAAAALEARINAAPGPWFFRRKTRLQPNQADFPSLDAWLRFLWSETGALWASGAISRTVSAEELDALGEGGLEALVRSTATLFAPLMASTVPDAAASSAAQPLFPADEEAETVPEQDEVVRPELEGFLQRFADARQGPFAGQAGLGAVLERIKAALSRMPALQAHPEVQVSWSLGKGNWATVPWIALMDRRVTTSTQRGFYVVFLFPQDLSGVYLTLNQGVTDVIQGLKRVAGRQELQSRAQRARVAVPELATAGYVLDDTLGLRTNAALAADYESSTIAYKFYPAGAVPADAEIEADLRVALDAYARVIEAVPTRTGDAVGEAEEEADDDEPSVVEPGQGVWLWAPGQNASHWDELYEQGRIAIGWDEMGDLSRYPSLEQMTAALRQVYARSDNPFNDARACHGFAHVMRPGDLVFAKRGRSTLIGYGVVTGDYSFDPSRPSMQSVRSVRWVQRGEWPAPYQLPMKTLTRLTGDPEAIASLKAAVGAATPEAPKAVAVQERKPFTVDDAMRGLFMPQTTFERSLEVWRHKQNLILQGAPGVGKSYVARRMAYALMGYEDPSRVRTVQFHQAYAYEDFVQGFRPNGGGFELKEGVFLEFCRRALADPNETYVFIIDEINRGNLAKILGELMLLIEPDKRGPEWGVKLAYAKEADARFYVPQNLFVLGMMNTADRSLTMVDYALRRRFAFVSVEPGFAEDSFAAHLADKKVSAGMLARIRSRIGNLNATIREDRANLGPGFCIGHSFFAGPPEAEPGQDSLTPEAEDAWYQRVVDTEIVPLLEEYWFDDPSRAEQWRSTLLS
SIO_010081: IAI59_RS22445
subclass of: SO_0000673
so part of: IAI59_RS22445
location: complement(6337..9174)
location: region:6337-9174:-1
so has part: feature:6337-9174:-1:exon

WP_207419909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6337-9174:-1:exon

IAI59_RS22450
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22450
so part of: sequence
location: complement(9290..9700)
location: region:9290-9700:-1
so has part: feature:9290-9700:-1:exon
subclass of: SO_0000010

position:9290:-1
position: 9290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9700:-1
position: 9700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9290-9700:-1:exon

IAI59_RS22450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007560635.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKLLLDTHALLWWLSDDPRLGNAARECITDPANDILVSAVSLWEILVKVRVGKLLADIEDILAELQAQSFTLLPIAPTHLVVLVGLPMHHRDPFDHLLIAQAIAEGATFLSADSFTPRYPVQHLTCSDSASGSSVG
SIO_010081: IAI59_RS22450
subclass of: SO_0000673
so part of: IAI59_RS22450
location: complement(9290..9700)
location: region:9290-9700:-1
so has part: feature:9290-9700:-1:exon

WP_207419910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9290-9700:-1:exon

IAI59_RS22455
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22455
so part of: sequence
location: complement(9697..9972)
location: region:9697-9972:-1
so has part: feature:9697-9972:-1:exon
subclass of: SO_0000010

position:9697:-1
position: 9697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9972:-1
position: 9972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9697-9972:-1:exon

IAI59_RS22455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012813325.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MAEQDKAPLPTPQRIGIREFRGNLPGYLRQVRQGSSFLVTSRGEVVALVQPPQPPAPPHRRPGTLRGKIRMTADFDTLPDDVLSLMENGGL
SIO_010081: IAI59_RS22455
subclass of: SO_0000673
so part of: IAI59_RS22455
location: complement(9697..9972)
location: region:9697-9972:-1
so has part: feature:9697-9972:-1:exon

WP_207419911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9697-9972:-1:exon

IAI59_RS22460
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22460
so part of: sequence
location: 9971..10966
location: region:9971-10966:1
so has part: feature:9971-10966:1:exon
subclass of: SO_0000010

position:9971:1
position: 9971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10966:1
position: 10966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9971-10966:1:exon

IAI59_RS22460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22460
inference: COORDINATES: protein motif:HMM:NF016163.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF429 domain-containing protein
translation: MATPHVFTYCVRFAAATVKPNSVKAESLAGWHQSQTVCDKGERVAGLGIADYLGAMTPPTLPQASDLPASGSVLGVDVGFSQTRRSSAVCRLDWNAEQVSWTIQRFRAIPAEQQATIAVVAGQVQLQAAALDGPLRAGFDVIGRYRTAERMLTRRLGAKIGKPGQASVPIGRQLNAAANDCANIVLKQGHLAPAMHEIRIDDRCIAEAFPSAFLGVLLADPVAVAARRKDRSDTFYRHLAENGALVRLVNVLLPRRRLSVPFESVTKHDDRAALICALTALCVATGDFTAVGDADGWIILPPRRIVQDWAWQDLAANTENEVSGCLYQSLP
SIO_010081: IAI59_RS22460
subclass of: SO_0000673
so part of: IAI59_RS22460
location: 9971..10966
location: region:9971-10966:1
so has part: feature:9971-10966:1:exon

WP_207419912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9971-10966:1:exon

IAI59_RS23250
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS23250
so part of: sequence
location: 11000..11758
location: region:11000-11758:1
so has part: feature:11000-11758:1:exon
subclass of: SO_0000010

position:11000:1
position: 11000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11758:1
position: 11758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11000-11758:1:exon

IAI59_RS23250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS23250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006552809.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease
translation: MVALSKLDDPAPVLRALAEYDQLGEDAFLAKYGFDPSRAYWLPYNGKRYVSKAVVGAAFGYLAPSAYPLKASEFAGGKATVQKALTRLGFTIEVNDASHPTTKPTGLSANDADEAAFNPNGMLDAREKVLREIKARRGQKAFRDQLLKAYDGRCAISGCAVLDVLEAVHIVPYRGDNTNHPINGLLLRADLHTLFDCGLIAIDPDTLKVLVASAIKDPSYREFHGHMLRRAIDLRLAPSLAALRHHRKAALV
SIO_010081: IAI59_RS23250
subclass of: SO_0000673
so part of: IAI59_RS23250
location: 11000..11758
location: region:11000-11758:1
so has part: feature:11000-11758:1:exon

WP_207419913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11000-11758:1:exon

IAI59_RS22470
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22470
so part of: sequence
location: 12132..14141
location: region:12132-14141:1
so has part: feature:12132-14141:1:exon
subclass of: SO_0000010

position:12132:1
position: 12132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14141:1
position: 14141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12132-14141:1:exon

IAI59_RS22470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22470
inference: COORDINATES: protein motif:HMM:NF024642.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MSPYWIMSRPFLPVSIVELEKIAAHARTSNDKQTLNLVVYELSFRAVPRAVALLKELTEAAGPTTSVERSSPASGNEIAKSRNAERKPIPKTVIATSNKTPSHRPTHEQDQAIQLFGTGRNLKINAYAGTGKTSTLEMLSHSTKRRGQYLAFNRDIVADARKKFPNTVNCATTHSLAFRSVAARYGGNAAKLTEKINANQLVELFQLKGMRFGGSHVVKPRSLGFLIIDTVRRFTMSSDAEPLSSHVPLHGSLVAASEASKEEARDFATHGAKMLWKRMCDAGDSIPLGFDGYLKLWTMSAPAIAADFILLDEAQDTNPAVLDLLRKQKCQIVYVGDKYQQIYEWRGAVNAMDKVQTEESTYLTTSFRFGPSIAEAATKLLQRMGETRPLTGNSALASRIGATPQARTILCRTNASTMTTIISALNAGQRPHLVGGKDELMRMLEGVSELKRGEPSSVPDFFGFTRWDEVIEFVSSGDGEHLQTFVNLVQTTGERQLMWALRRTADADACDVVVSTAHRAKGREWPTVLLTDDFVKSWQKPSAKTQTEDLDEHSETRLLYVAMTRARESIEVPQPILRALGLTTGNDSPRGQSAATTRSPSAPPRPDTLPTSRSEAFASSPPSAPAATESSTRGDGFPPMRPGTSSPPSATVAPAAPKTKNLLKRLLGF
SIO_010081: IAI59_RS22470
subclass of: SO_0000673
so part of: IAI59_RS22470
location: 12132..14141
location: region:12132-14141:1
so has part: feature:12132-14141:1:exon

WP_207419914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12132-14141:1:exon

IAI59_RS23255
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS23255
pseudo: true
so part of: sequence
location: 14206..>14689
location: region:14206-14689:1
so has part: feature:14206-14689:1:exon
subclass of: SO_0000010

position:14206:1
position: 14206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14689:1
position: 14689
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14206-14689:1:exon

IAI59_RS23255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS23255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611628.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: IAI59_RS23255
subclass of: SO_0000673
so part of: IAI59_RS23255
location: 14206..>14689
location: region:14206-14689:1
so has part: feature:14206-14689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14206-14689:1:exon

IAI59_RS22480
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22480
so part of: sequence
location: complement(14667..15119)
location: region:14667-15119:-1
so has part: feature:14667-15119:-1:exon
subclass of: SO_0000010

position:14667:-1
position: 14667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15119:-1
position: 15119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14667-15119:-1:exon

IAI59_RS22480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22480
inference: COORDINATES: protein motif:HMM:NF015658.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MGPGDAYDSAADDNAPFPRTWWDLSSAAAVEAGQQANLRYVEGMRPHHAGALMLARDYLASRTAATTCCALAQSIIPNQGFEILLLDEVGRLTRIDPSGPGWLSARPMATERLGYHLRFQKLPPGLGALIFPGSSITACDIRFAKELADD
SIO_010081: IAI59_RS22480
subclass of: SO_0000673
so part of: IAI59_RS22480
location: complement(14667..15119)
location: region:14667-15119:-1
so has part: feature:14667-15119:-1:exon

WP_272874704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14667-15119:-1:exon

IAI59_RS22485
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22485
so part of: sequence
location: 15520..16866
location: region:15520-16866:1
so has part: feature:15520-16866:1:exon
subclass of: SO_0000010

position:15520:1
position: 15520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16866:1
position: 16866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15520-16866:1:exon

IAI59_RS22485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007427728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D family protein
translation: MRLILGGINGQYLLNITENAARDTDEVLAAVAYATNTDLLFDWCWNNKIPLRFYGRLDDQVAVAAPVLENFLRRRSGIHVCKLVQHHHAKVIWWRGVGVYIGSANLTDRAWYKNVEAGCFFTDDEITDEMAADLHGLFATLEEHATPLTQELLSEMRARAHEVHQARSDAKRFWGHPSLITWPGLVQTTPKGAAQKRRDSFLKEWHATLEHLRNIGLTVSHPENRPIWVNGAVPIGAQADQFLHAFYYQRTFAGTKANYAAHYEQNKMRPDSALAEAVTWWRGLATAPQSEDYMLNVSAPALQAALAEPQLATMTGEQFREVCDRVHAIRDYSRRVRNQAVNLPDGTNYNILQKLDALADRIWNDQGSMGGRVRDLLHHILYNGSSDQLPERLWQGIVDPKWKIEGLGVSALGELVGWALPDHFPPRNGRTSKALRALGYPVTIHVGQ
SIO_010081: IAI59_RS22485
subclass of: SO_0000673
so part of: IAI59_RS22485
location: 15520..16866
location: region:15520-16866:1
so has part: feature:15520-16866:1:exon

WP_207419917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15520-16866:1:exon

IAI59_RS22490
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22490
so part of: sequence
location: 17713..18186
location: region:17713-18186:1
so has part: feature:17713-18186:1:exon
subclass of: SO_0000010

position:17713:1
position: 17713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18186:1
position: 18186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17713-18186:1:exon

IAI59_RS22490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRALALSLLLTGGFVAAASADESPPPSRVTYLLGGVVSGPYRLVVDLENDRLSEAKPPPGVNGDGARVSAVDIPETARRALTPVEHDRFRALAAAVWRDGAARRGCLEFNVDAMVRLTITAGGVERRSDAPAQCLTPDADALLGALLCAANPTTGCS
SIO_010081: IAI59_RS22490
subclass of: SO_0000673
so part of: IAI59_RS22490
location: 17713..18186
location: region:17713-18186:1
so has part: feature:17713-18186:1:exon

WP_207444062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17713-18186:1:exon

IAI59_RS22495
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22495
so part of: sequence
location: complement(18475..19074)
location: region:18475-19074:-1
so has part: feature:18475-19074:-1:exon
subclass of: SO_0000010

position:18475:-1
position: 18475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19074:-1
position: 19074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18475-19074:-1:exon

IAI59_RS22495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22495
inference: COORDINATES: protein motif:HMM:NF018525.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MRRDGSNLRVMVLHGAHGGPDTNWFPWLQSELSAQGIEVIVPRFPTPEGQSLQAWFDAYDRATNALPAVPTMIVGHSLGAAFALRLVERADKPFEGLLLASGFVGALDLPDYDPINASFFVAPFDWTDIRKRRGRTCRCWAGDDDPYVPLPRSQDVADHLHAPLEVIGQGGHLNSETGFNTFPHLRDAILTHRATVLAG
SIO_010081: IAI59_RS22495
subclass of: SO_0000673
so part of: IAI59_RS22495
location: complement(18475..19074)
location: region:18475-19074:-1
so has part: feature:18475-19074:-1:exon

WP_207419919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18475-19074:-1:exon

IAI59_RS22500
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22500
so part of: sequence
location: complement(19263..19985)
location: region:19263-19985:-1
so has part: feature:19263-19985:-1:exon
subclass of: SO_0000010

position:19263:-1
position: 19263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19985:-1
position: 19985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19263-19985:-1:exon

IAI59_RS22500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006470666.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate/glutamate racemase family protein
translation: MPQKVIGLIGGMSWESSAEYYRIINQAVRTRLGGLHSARCLMWSFDFAEIEALQHAGRWDDAASEMIAAARGLEAGGADFVVICTNTMHRMADQVQQAIGLPLLHIADPTAARIKAAGLTRVGLLGTAFTMEQGFYKGRLTERHGLEVLVPGDEDRALVHRVIYEELVKGRATPSSRQAYRDVIARLVDQGAEAIILGCTEIMLLVTPEDSAVPLFDTTAIHAQAAVDLALAELDQLPSH
SIO_010081: IAI59_RS22500
subclass of: SO_0000673
so part of: IAI59_RS22500
location: complement(19263..19985)
location: region:19263-19985:-1
so has part: feature:19263-19985:-1:exon

WP_207419920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19263-19985:-1:exon

IAI59_RS22505
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22505
so part of: sequence
location: 20191..20565
location: region:20191-20565:1
so has part: feature:20191-20565:1:exon
subclass of: SO_0000010

position:20191:1
position: 20191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20565:1
position: 20565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20191-20565:1:exon

IAI59_RS22505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017978032.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF393 domain-containing protein
translation: MSQLQVWHDGACPLCQREIALMRRLDRRGAIAFIDVATPEAACPLDRAALLARFHAREDGQMLSGAAAFAAMWRAIPVLRPLGLIARHPAVLWLLERAYRGFLRGRPALQRWMRRHTPSPGASR
SIO_010081: IAI59_RS22505
subclass of: SO_0000673
so part of: IAI59_RS22505
location: 20191..20565
location: region:20191-20565:1
so has part: feature:20191-20565:1:exon

WP_207419921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20191-20565:1:exon

IAI59_RS22510
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22510
so part of: sequence
location: 20562..21056
location: region:20562-21056:1
so has part: feature:20562-21056:1:exon
subclass of: SO_0000010

position:20562:1
position: 20562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21056:1
position: 21056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20562-21056:1:exon

IAI59_RS22510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010161579.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF427 domain-containing protein
translation: MSVVPDPARPGQESVWAFPRPAVAEACARHIRIQHAGFVIADSRRSVRTLETSHPPSYYLPPQDVAMTQLRPSSRRSLCEWKGQAVYFDLVLDGIVLPEIAWSYPRPTSAFQALAGYLAFYAAPLDLCEVDGERVTPQPGGFYGGWITSHVAGPFKGGTGSLGW
SIO_010081: IAI59_RS22510
subclass of: SO_0000673
so part of: IAI59_RS22510
location: 20562..21056
location: region:20562-21056:1
so has part: feature:20562-21056:1:exon

WP_207419922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20562-21056:1:exon

IAI59_RS22515
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22515
so part of: sequence
location: complement(21140..21745)
location: region:21140-21745:-1
so has part: feature:21140-21745:-1:exon
subclass of: SO_0000010

position:21140:-1
position: 21140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21745:-1
position: 21745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21140-21745:-1:exon

IAI59_RS22515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22515
inference: COORDINATES: protein motif:HMM:NF014045.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MHLAYVDCSNLFIEAQKVSAVARGMAPSLAAVNHRHASDFAYRLDFHRLMALLREVDDPLRAAAFGSITDANETLWSHAQAAGFDVQVVERGADGREKRVDTGVVTRICRDAYRLADPDRDRITLVAGDGDYEPLVRQLVADRFHVTLLFWAHASRELQQAVSHFHALDPYIAELALGCRDTSGGKDIHRSRGQSCGSAGG
SIO_010081: IAI59_RS22515
subclass of: SO_0000673
so part of: IAI59_RS22515
location: complement(21140..21745)
location: region:21140-21745:-1
so has part: feature:21140-21745:-1:exon

WP_207419923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21140-21745:-1:exon

IAI59_RS22520
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22520
so part of: sequence
location: complement(22257..22880)
location: region:22257-22880:-1
so has part: feature:22257-22880:-1:exon
subclass of: SO_0000010

position:22257:-1
position: 22257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22880:-1
position: 22880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22257-22880:-1:exon

IAI59_RS22520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007967576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MQIITMASRKGGAGKTTLTCHLAVEAERCGQGPVAIIDTDDMAGLTKWWHARSADTPVLAEIQGGVAATLEGLKAAGFKIVIVDTPPALTQDVTDAVMAADLVLIPVQPSPDDLRAVGETVSLVQQAKKPTAFALNRVKKRVRLTAEAAVALSQHGAIAPSMVHDRTDYAGAKTGGLTAPEVDPSGAAAGEIAALWAYVASRLGGPR
SIO_010081: IAI59_RS22520
subclass of: SO_0000673
so part of: IAI59_RS22520
location: complement(22257..22880)
location: region:22257-22880:-1
so has part: feature:22257-22880:-1:exon

WP_207419924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22257-22880:-1:exon

IAI59_RS22525
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22525
so part of: sequence
location: 23459..23932
location: region:23459-23932:1
so has part: feature:23459-23932:1:exon
subclass of: SO_0000010

position:23459:1
position: 23459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23932:1
position: 23932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23459-23932:1:exon

IAI59_RS22525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDAARRLERRSHQPGLHGGALRRTGILVLWTLLYRGPSKHGVCDPSISQLAEWSGCARSTVQTALGRIEAAGIMGHVRRGIVVTVRGAARWCQWTNAYLFASVERWHSDTENWSAQVSLTRKKAQEGEGVGKDNPLSAAEQQALLVKWGLAMPSSPV
SIO_010081: IAI59_RS22525
subclass of: SO_0000673
so part of: IAI59_RS22525
location: 23459..23932
location: region:23459-23932:1
so has part: feature:23459-23932:1:exon

WP_207419925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23459-23932:1:exon

IAI59_RS22530
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22530
so part of: sequence
location: complement(23916..25031)
location: region:23916-25031:-1
so has part: feature:23916-25031:-1:exon
subclass of: SO_0000010

position:23916:-1
position: 23916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25031:-1
position: 25031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23916-25031:-1:exon

IAI59_RS22530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013556082.1
GO function: GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0036297 - interstrand cross-link repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: crosslink repair DNA glycosylase YcaQ family protein
translation: MTSRLLTLAQLRALARANTLFPPLPLADALHRLGFVQADPIRAPARAQDLILRHRVRGYRAGDLDRAFARLGLEEDFLYAYGFMPAATRHLLHPRADPLHPAGLHQPDTLAAAVLDFVRTAGPTHPRDLEVRFGRDRAINAWGGFSKATTRALESLHHFGLLRVAQRRDGIRIYAAAPQPPALLDAAERARRAVLLIAQILAPVSLTSLHGALALMARRNPGLGPLPPVVVALRKTGALEQAIVEGERYLWPAGMADSPQPPIPRDVRILAPFDPLVWDRRRFEHLWGWAYRFEAYTPPVRRQFGYYAMPLLHGDAVVGWINLALIGGQLQVDLGYAVRPPHSQAFQRALEAELARFQRFLIARTSLTQAS
SIO_010081: IAI59_RS22530
subclass of: SO_0000673
so part of: IAI59_RS22530
location: complement(23916..25031)
location: region:23916-25031:-1
so has part: feature:23916-25031:-1:exon

WP_207419926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23916-25031:-1:exon

IAI59_RS22535
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22535
so part of: sequence
location: 25614..26348
location: region:25614-26348:1
so has part: feature:25614-26348:1:exon
subclass of: SO_0000010

position:25614:1
position: 25614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26348:1
position: 26348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25614-26348:1:exon

IAI59_RS22535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MADTPQQVDIFRTSPLHFLRGPEQSEGVVVYGHGYGGPDADGRSSRAPGWLSGFNDAGWDILRYDRHPAEDELYNTLPRLIRAVPRLRALGYRRIVLAGGSRGGWQSLLAAGEASGVDTVLAIAPAAHGRSGAGHSAVLDDWQRGLGALPSKQVRVAAVLFDDDRFDPDPERRASMLMANGLQRGVPVLALRPQQPVRGHSGDALWQFTHDYTQCLVSFVMDASPPSAIRRLPCGTESNPAVSP
SIO_010081: IAI59_RS22535
subclass of: SO_0000673
so part of: IAI59_RS22535
location: 25614..26348
location: region:25614-26348:1
so has part: feature:25614-26348:1:exon

WP_207419927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25614-26348:1:exon

IAI59_RS22540
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22540
so part of: sequence
location: 26498..27340
location: region:26498-27340:1
so has part: feature:26498-27340:1:exon
subclass of: SO_0000010

position:26498:1
position: 26498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27340:1
position: 27340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26498-27340:1:exon

IAI59_RS22540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22540
inference: COORDINATES: protein motif:HMM:NF024758.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine protease
translation: MNREPYRIAHTPVHPISASIVMIEMIAELSDHSEISLGTGTGFLEDFEGKKYLVTNWHCVTGRDPLSGQPRATDGVIPNKFKIRFHKIKENSIDVGNPIIGVFDLDEPWIMHPAGQDIDIAAVEIPNDWDFIKYSIRSVVGAFDPMLAVGDEVFIIGFPLSMGPSGSLPLWKRGSVASEPAVPAFGQPCYLVDSASRPGMSGSPILGRIISAKDYPNLPGNGPVTKDTLISYTPTWSFLGIYSGRIGVKDLFEAQIGKVWRPETIQEMLGNPRKLDFILK
SIO_010081: IAI59_RS22540
subclass of: SO_0000673
so part of: IAI59_RS22540
location: 26498..27340
location: region:26498-27340:1
so has part: feature:26498-27340:1:exon

WP_207419928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26498-27340:1:exon

IAI59_RS22545
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22545
so part of: sequence
location: complement(27990..28838)
location: region:27990-28838:-1
so has part: feature:27990-28838:-1:exon
subclass of: SO_0000010

position:27990:-1
position: 27990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28838:-1
position: 28838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27990-28838:-1:exon

IAI59_RS22545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLLADDDTLLALLLIENKVLSGFQDGQPERYQAEVAAARDQLGHWRAAAVLVVPENNLHVRSGPGRTAFDADITIEAITAYMEQRAEQILSEQADSTLAVETASRLRNRAVLLSALLGRAPRQTTSFGPDPERLSFMGAYRAMAREALGPDFLITDSSGGKKSTTMIFKPARPIAGNLPVQYIRHDFGAKQEVSLVLNDFGYRVASLGTALASLPGAKAEVGKVSRVEGKQPSVMVRLISPALDVDVPPQEQRMALEGALGLIRQMHDWVVRVSPTISQSE
SIO_010081: IAI59_RS22545
subclass of: SO_0000673
so part of: IAI59_RS22545
location: complement(27990..28838)
location: region:27990-28838:-1
so has part: feature:27990-28838:-1:exon

WP_207419929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27990-28838:-1:exon

IAI59_RS22550
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22550
so part of: sequence
location: complement(29136..29654)
location: region:29136-29654:-1
so has part: feature:29136-29654:-1:exon
subclass of: SO_0000010

position:29136:-1
position: 29136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29654:-1
position: 29654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29136-29654:-1:exon

IAI59_RS22550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATDLTIASLLPFLGTQRTWFHATLAGPGIRSFTGMHWGTRAAALARLRDVLDLPGAARPWGMPEGPGQPTLYKAEIRPQRPLEIADGLHDTDHLGDEFLARGIVCQAQATAMLAGEIEPFEALTVQGIDALVYRNAHEDPGSVSVVPLTQAIVRLIEITAITENIIRHQSE
SIO_010081: IAI59_RS22550
subclass of: SO_0000673
so part of: IAI59_RS22550
location: complement(29136..29654)
location: region:29136-29654:-1
so has part: feature:29136-29654:-1:exon

WP_207419930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29136-29654:-1:exon

IAI59_RS22555
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22555
so part of: sequence
location: complement(30059..35011)
location: region:30059-35011:-1
so has part: feature:30059-35011:-1:exon
subclass of: SO_0000010

position:30059:-1
position: 30059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35011:-1
position: 35011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30059-35011:-1:exon

IAI59_RS22555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007552943.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MAAGIRELLERYRAGAKTQREKGTYFERLCIEFLKHDPEMAQQFEEAWTFGDFAKAAGVKQSDTGIDLVAKLRNEDGYCAIQCKFYAPGHTIQKTDIDSFFTASGKAPFTRRLVIDTTEVPWGKNAEDALAGQSIATSRISLERLEQSPIDWRAYLADDKIILAPKKELRPHQREALEAVRAGLAEADRGKLIMACGTGKTFTGLKISEDLAGPGKFVLFLVPSLALMSQTVREWSIDTTTPLRSFAVCSDVQVGRRSRSNEDIGEIDIHDLAYPATTDAVKLAAKATSTASEMTVVFSTYQSIQVIADAQTKHDFPEFDLIICDEAHRTTGATLEGEDESNFVKIHNQDFIAGKKRIYMTATPRIFGDAVRTKANEVSAELYSMNNPAYYGETLFQRGFGWAVENGLLTDYKVIVLAVDEQMVSTSIQNRLKDTDNELKLDDATKIIGCYKALTKADLAADVASDTRPMSRALAFCKDIASSKLVRDQFAAVVEDYLDALPADDQEPLRCEVHHVDGTFNAKTRTQELEWLKADHEEHTCRILSNARCLSEGVDVPALDAIMFLHPRKSQIDVVQSVGRVMRRAPNKKMGYVILPVGIPADMTPEEALNQNERYRVVWQILNALRAHDERFDATINKMELGVDVSTQIEVIAVSDRLPTKTAKEGHQLDLGAGGGEADDRDYGDSQPKPSGLEQLAFTFDEFTSAIRAKIVKKCGQRDYWENWATDIADIARKHITRIAAVIQQPGSPERVAFEKFLAEIRDDLNGSISEAEAIEMLAQHIITRPVFEALFDGYSFAQRNPVSVAMQQVLDTLNEHNLEKESESLQKFYGSVRRRAEGIDNAGAKQRIIVELYDKFFRKAFPEMTERLGIVYTPVEVVDFIIHSVNEILQSEFGQTLGSKGVHILDPFTGTGTFITRLLQSGLIKPEELKHKYRHEIHANEIVLLAYYIAAINIEAAYHGVAGGDYVPFEGICLTDTFQLYEQDRDLVGDLMVDNSSRRSRQKKLGIRVIVGNPPYSVGQGSANDNAANIVYPKLDGRIRKTYAAQTSATNKNALYDSYIRAIRWASDRLGDNGVIAYVSNAGWIEGNATDGLRKCLTKEFSTIYIFHLRGNQRTSGDRSRREGGKIFGSGSRTPVAITLLIKNPASTNHGQIHFYDIGDYLSQKEKLDIIKRFGSISGISVDDKWQRIAPNVQSDWINQRDSSFSDFLPMGDKGNGHAAPIFVTYSQGAQSARDAWVFNFSHASLIKNVSAMVSAYNFERSKFVDLRKTFPSAKARDLFVSNFVTKDEKRISWSRALKSDVGKGTSFEVSPDKVVTSLYRPFTKQWMYFDRKMNEYVFQIPKIFPKQETQNRVICVIGVGEANLPSALMLDAVPEFKTHYNGQNFPRYVYTLEDEEADDLLFQAVDKKCGPKIKRNDGITDAALAYFESAYQGEQITKDDLFYYVYGLLHSEDYRARYADNLSKQLPRIPAVKKAADFRAFVEAGRKLGELHVGYEAVEPYPATIVQGDLRLKNILDPEAYFHVLQMKFGGKRPKQDKTTVIYNANITMTGIPLEAYDYVVNGKPALEWVMERQCVKTDRASGIVNDANRYATETIGDPAYPLKLFQRVITVSLETMKIVRALPELDILDMASENPVFRKPDEWTARG
SIO_010081: IAI59_RS22555
subclass of: SO_0000673
so part of: IAI59_RS22555
location: complement(30059..35011)
location: region:30059-35011:-1
so has part: feature:30059-35011:-1:exon

WP_207419931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30059-35011:-1:exon

IAI59_RS22560
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22560
so part of: sequence
location: complement(35125..35436)
location: region:35125-35436:-1
so has part: feature:35125-35436:-1:exon
subclass of: SO_0000010

position:35125:-1
position: 35125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35436:-1
position: 35436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35125-35436:-1:exon

IAI59_RS22560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSIGEVIAAEALGLTLYPMPRAGHDAYDANGDIQIKMMGGSSVAMYATCDRLLVLRVVSPQEAELVYDGPGAPAWERAGKMDKNGQRVVSLSRLRAIQAALA
SIO_010081: IAI59_RS22560
subclass of: SO_0000673
so part of: IAI59_RS22560
location: complement(35125..35436)
location: region:35125-35436:-1
so has part: feature:35125-35436:-1:exon

WP_207419932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35125-35436:-1:exon

IAI59_RS22565
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22565
pseudo: true
so part of: sequence
location: 35898..>36361
location: region:35898-36361:1
so has part: feature:35898-36361:1:exon
subclass of: SO_0000010

position:35898:1
position: 35898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36361:1
position: 36361
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35898-36361:1:exon

IAI59_RS22565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611370.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: IAI59_RS22565
subclass of: SO_0000673
so part of: IAI59_RS22565
location: 35898..>36361
location: region:35898-36361:1
so has part: feature:35898-36361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35898-36361:1:exon

IAI59_RS22570
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS22570
so part of: sequence
location: 36575..37219
location: region:36575-37219:1
so has part: feature:36575-37219:1:exon
subclass of: SO_0000010

position:36575:1
position: 36575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37219:1
position: 37219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36575-37219:1:exon

IAI59_RS22570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS22570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVDSELLQKDLERLCRQRFELGVVAEVTGVPLPRLSQWLKGQAFVLFEEQAPGTGRRRLFHLVDVYTVRFFAVLTDVEGGLGLPLKTASRVLDTAWGLTETDEAATMAPGSWIDPRSDFDRGHFGHLNPCRPRTRPQWLIGVRVHHVHPRHSFWRGRFTEQAERPDRSGDRTPADLFFALEATPHLLDVNAQLFQRLRWADALNRLPPAFEIP
SIO_010081: IAI59_RS22570
subclass of: SO_0000673
so part of: IAI59_RS22570
location: 36575..37219
location: region:36575-37219:1
so has part: feature:36575-37219:1:exon

WP_207419933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36575-37219:1:exon

IAI59_RS23260
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
locus tag: IAI59_RS23260
so part of: sequence
location: 37242..38279
location: region:37242-38279:1
so has part: feature:37242-38279:1:exon
subclass of: SO_0000010

position:37242:1
position: 37242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38279:1
position: 38279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37242-38279:1:exon

IAI59_RS23260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
locus tag: IAI59_RS23260
inference: COORDINATES: protein motif:HMM:NF017116.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VapE family protein
translation: MTHVQSSPAAVSPAGRPPLALLQAAPARRKRPSLVAFLKATDQQALANIEPWFRALFPTAQRQPGTGAWYVLAQDIGREPEEDLSIDPIEGGYDHGIGRPRSPVDVVLQWQRLATREEAALWLCGKMALDPTRLGWAGAAAAARAAGLPAWQQECQVTSDGIPRPNLANALLALRGDPALAELLAQDEMLRAPLLRAAVPGSNGPKDRFPCPLRDTDVTAIQEYLQHIGIPGLSKDVVNQAVERRAAECAVHPVRDYLDALVWDGTPRLQGWLSTYLGAVHTPYTSGIGTLFLTAMVARVYAPGCKADYMMVLEGDQGARKSTACGILGGAWFSDALPVWIGVED
SIO_010081: IAI59_RS23260
subclass of: SO_0000673
so part of: IAI59_RS23260
location: 37242..38279
location: region:37242-38279:1
so has part: feature:37242-38279:1:exon

WP_207419934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37242-38279:1:exon

IAI59_RS22580
type: Gene
subclass of: SO_0000704
RO_0002162: 2768162
gene: istA
locus tag: IAI59_RS22580
so part of: sequence
location: 38361..>39905
location: region:38361-39905:1
so has part: feature:38361-39905:1:exon
subclass of: SO_0000010

position:38361:1
position: 38361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38361-39905:1:exon

IAI59_RS22580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768162
gene: istA
locus tag: IAI59_RS22580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611638.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MLTVDMMARVRRAHFVDGKSIKQITRELGLARNTVRRVLRSGETAFTYERQVQPRPKLGAWTQLLEQRLSANERLPSRERLDLIRVFEDLQQQGFTGGYDTVRRYARARQRQRGTATSDAYIPLSFEPGEAYQFDWSQEVVVLHGATVAVRVAQMRLCHSRMLFVRAYPRESQEMVFDAHDKAFAFFRGTCQRGIYDNMRTAVDVVGVGRERQFNRRFLQMCSHYLVEPTACTPASGWEKGQVENQVGLVRNRFFKPRLKFASLHDMNGWLLEQCVLYARSHPHPERRDCPVWEMFEQERPALVPYVGTFDGFNARTSAVSKTCLVAYDKNRYSVMAQAVGRPVEVHAYAERILIRQDGQVVGEHPRCFGREQIVYDPWHYVPVLARKPGALRNGAPFKGWVLPGALGRVQGRLRGSADGDRQMVAILQAVSLDGLPAVEAACAEALAAGLCSSDVVLNALSRQRPATTPPDIATPDALRLRHEPIADCARYDTLRSQSHGTTSGAGADERAQAG
SIO_010081: IAI59_RS22580
subclass of: SO_0000673
so part of: IAI59_RS22580
location: 38361..>39905
location: region:38361-39905:1
so has part: feature:38361-39905:1:exon

WP_207444064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38361-39905:1:exon