Roseomonas haemaphysalidis strain 546 plasmid p546-1.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.
Submitted (03-SEP-2020) National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, No. 155 Changbai Road, Changping District, Beijing 102206, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP061178.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT v. v5.1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/10/2023 23:50:16\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,580\nCDSs (total) :: 4,516\nGenes (coding) :: 4,480\nCDSs (with protein) :: 4,480\nGenes (RNA) :: 64\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 4\nPseudo Genes (total) :: 36\nCDSs (without protein) :: 36\nPseudo Genes (ambiguous residues) :: 0 of 36\nPseudo Genes (frameshifted) :: 15 of 36\nPseudo Genes (incomplete) :: 26 of 36\nPseudo Genes (internal stop) :: 7 of 36\nPseudo Genes (multiple problems) :: 10 of 36\n##Genome-Annotation-Data-END##
type strain of Roseomonas haemaphysalidis
COORDINATES: protein motif:HMM:NF013793.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007005545.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_007921940.1
COORDINATES: similar to AA sequence:RefSeq:WP_017640931.1
COORDINATES: similar to AA sequence:RefSeq:WP_017277387.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436263.1
PDDEXK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007437138.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007437139.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019461050.1
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF00521
SAM riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_018115832.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435126.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435127.1
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_002711546.1
COORDINATES: similar to AA sequence:RefSeq:WP_012453175.1
COORDINATES: similar to AA sequence:RefSeq:WP_013651814.1
COORDINATES: similar to AA sequence:RefSeq:WP_008134766.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462522.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462521.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462520.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_007436791.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019965885.1
COORDINATES: similar to AA sequence:RefSeq:WP_013232195.1
COORDINATES: protein motif:HMM:NF015366.2
COORDINATES: similar to AA sequence:RefSeq:WP_018902423.1
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_007004079.1
COORDINATES: protein motif:HMM:NF024966.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018509471.1
COORDINATES: similar to AA sequence:RefSeq:WP_014531769.1
COORDINATES: similar to AA sequence:RefSeq:WP_006611603.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046870.1
COORDINATES: similar to AA sequence:RefSeq:WP_002723115.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018181192.1
COORDINATES: similar to AA sequence:RefSeq:WP_007002098.1
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_012405840.1
COORDINATES: similar to AA sequence:RefSeq:WP_019013763.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007002100.1
COORDINATES: similar to AA sequence:RefSeq:WP_007121232.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_019462948.1
COORDINATES: similar to AA sequence:RefSeq:WP_007079746.1
COORDINATES: protein motif:HMM:NF019604.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015597189.1
COORDINATES: similar to AA sequence:RefSeq:WP_002721414.1
COORDINATES: protein motif:HMM:NF016658.2
COORDINATES: protein motif:HMM:NF018942.2
MauE/DoxX family redox-associated membrane protein
COORDINATES: protein motif:HMM:NF027363.2
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020675171.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:TIGR01097.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: similar to AA sequence:RefSeq:WP_020184891.1
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019014097.1
COORDINATES: similar to AA sequence:RefSeq:WP_009338194.1
COORDINATES: similar to AA sequence:RefSeq:WP_012319516.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
TIGR04282 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015665881.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: protein motif:HMM:NF016670.2
COORDINATES: similar to AA sequence:RefSeq:WP_007604279.1
COORDINATES: similar to AA sequence:RefSeq:WP_010685643.1
COORDINATES: similar to AA sequence:RefSeq:WP_012318595.1
COORDINATES: protein motif:HMM:NF012312.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010218091.1
COORDINATES: similar to AA sequence:RefSeq:WP_013393290.1
COORDINATES: similar to AA sequence:RefSeq:WP_003363336.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005729.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007005730.1
COORDINATES: protein motif:HMM:NF015411.2
COORDINATES: similar to AA sequence:RefSeq:WP_007434759.1
COORDINATES: similar to AA sequence:RefSeq:WP_007434760.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005734.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_007005735.1
COORDINATES: similar to AA sequence:RefSeq:WP_007434763.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007434764.1
GO:0018576 - catechol 1,2-dioxygenase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0009712 - catechol-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007005709.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007434767.1
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF019349.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007437602.1
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018746359.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008942743.1
COORDINATES: similar to AA sequence:RefSeq:WP_013385793.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007769641.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015663216.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_020576311.1
COORDINATES: similar to AA sequence:RefSeq:WP_014538195.1
COORDINATES: similar to AA sequence:RefSeq:WP_013385788.1
COORDINATES: similar to AA sequence:RefSeq:WP_013385787.1
COORDINATES: similar to AA sequence:RefSeq:WP_013385786.1
COORDINATES: similar to AA sequence:RefSeq:WP_007752018.1
COORDINATES: similar to AA sequence:RefSeq:WP_020723269.1
COORDINATES: protein motif:HMM:NF012550.2
COORDINATES: similar to AA sequence:RefSeq:WP_007436176.1
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_014749049.1
COORDINATES: similar to AA sequence:RefSeq:WP_018062965.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
fumarate hydratase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010215154.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436221.1
COORDINATES: similar to AA sequence:RefSeq:WP_006462966.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007436219.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013229034.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008996544.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007436216.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014993698.1
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: similar to AA sequence:RefSeq:WP_008139042.1
COORDINATES: similar to AA sequence:RefSeq:WP_007004493.1
COORDINATES: similar to AA sequence:RefSeq:WP_020654150.1
PhzF family phenazine biosynthesis protein
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_019461808.1
COORDINATES: similar to AA sequence:RefSeq:WP_019461807.1
COORDINATES: similar to AA sequence:RefSeq:WP_020382909.1
COORDINATES: similar to AA sequence:RefSeq:WP_007437154.1
COORDINATES: similar to AA sequence:RefSeq:WP_015817175.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
GO:0015840 - urea transport [Evidence IEA]
urea ABC transporter ATP-binding subunit UrtE
COORDINATES: similar to AA sequence:RefSeq:WP_019461287.1
urea ABC transporter ATP-binding protein UrtD
COORDINATES: similar to AA sequence:RefSeq:WP_007439318.1
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
urea ABC transporter permease subunit UrtC
COORDINATES: similar to AA sequence:RefSeq:WP_007439317.1
urea ABC transporter permease subunit UrtB
COORDINATES: similar to AA sequence:RefSeq:WP_007003027.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]; GO:0033219 - urea binding [Evidence IEA]
urea ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007439315.1
COORDINATES: similar to AA sequence:RefSeq:WP_007003029.1
COORDINATES: similar to AA sequence:RefSeq:WP_012453218.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020180765.1
GO:0030745 - dimethylhistidine N-methyltransferase activity [Evidence IEA]
GO:0052699 - ergothioneine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007002670.1
COORDINATES: protein motif:HMM:NF024844.2
MaoC family dehydratase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007436870.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435212.1
COORDINATES: similar to AA sequence:RefSeq:WP_007569421.1
COORDINATES: similar to AA sequence:RefSeq:WP_006157113.1
COORDINATES: similar to AA sequence:RefSeq:WP_007569427.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462918.1
GO:0004673 - protein histidine kinase activity [Evidence IEA]
HWE histidine kinase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006019327.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007923366.1
glutathione-independent formaldehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_003174475.1
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: protein motif:HMM:NF024583.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_008295333.1
PEP-CTERM sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976844.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005449.1
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012631312.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005448.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436133.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007005445.1
COORDINATES: similar to AA sequence:RefSeq:WP_007856180.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439132.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439133.1
COORDINATES: similar to AA sequence:RefSeq:WP_007437108.1
COORDINATES: similar to AA sequence:RefSeq:WP_019400177.1
C45 family autoproteolytic acyltransferase/hydolase
COORDINATES: similar to AA sequence:RefSeq:WP_007001924.1
COORDINATES: protein motif:HMM:NF006093.0
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_018064091.1
COORDINATES: similar to AA sequence:RefSeq:WP_007767193.1
COORDINATES: similar to AA sequence:RefSeq:WP_015319195.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007435153.1
COORDINATES: protein motif:HMM:NF025314.2
COORDINATES: similar to AA sequence:RefSeq:WP_019460625.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019403942.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_007630633.1
COORDINATES: similar to AA sequence:RefSeq:WP_007002711.1
COORDINATES: similar to AA sequence:RefSeq:WP_007002712.1
COORDINATES: similar to AA sequence:RefSeq:WP_007009952.1
COORDINATES: similar to AA sequence:RefSeq:WP_015231574.1
COORDINATES: similar to AA sequence:RefSeq:WP_014684183.1
COORDINATES: similar to AA sequence:RefSeq:WP_009637107.1
COORDINATES: similar to AA sequence:RefSeq:WP_015231577.1
COORDINATES: protein motif:HMM:NF010006.0
GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
2-aminoethylphosphonate--pyruvate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_007437792.1
COORDINATES: similar to AA sequence:RefSeq:WP_011618799.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_010974513.1
COORDINATES: similar to AA sequence:RefSeq:WP_018772061.1
COORDINATES: similar to AA sequence:RefSeq:WP_009493852.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012745276.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241996.1
COORDINATES: similar to AA sequence:RefSeq:WP_007812281.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018643077.1
COORDINATES: similar to AA sequence:RefSeq:WP_008142653.1
COORDINATES: similar to AA sequence:RefSeq:WP_006609048.1
COORDINATES: similar to AA sequence:RefSeq:WP_007812272.1
COORDINATES: similar to AA sequence:RefSeq:WP_008966786.1
COORDINATES: similar to AA sequence:RefSeq:WP_008142667.1
COORDINATES: similar to AA sequence:RefSeq:WP_019105366.1
COORDINATES: similar to AA sequence:RefSeq:WP_002711671.1
COORDINATES: similar to AA sequence:RefSeq:WP_013761152.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_018046177.1
COORDINATES: similar to AA sequence:RefSeq:WP_009285627.1
COORDINATES: similar to AA sequence:RefSeq:WP_016917705.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008945734.1
COORDINATES: similar to AA sequence:RefSeq:WP_007004696.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012189572.1
D-2-hydroxyacid dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007438297.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007438296.1
COORDINATES: similar to AA sequence:RefSeq:WP_007438295.1
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Cu(I)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007175571.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007438292.1
COORDINATES: similar to AA sequence:RefSeq:WP_007438291.1
COORDINATES: similar to AA sequence:RefSeq:WP_008373781.1
COORDINATES: similar to AA sequence:RefSeq:WP_007158983.1
COORDINATES: similar to AA sequence:RefSeq:WP_003508501.1
COORDINATES: protein motif:HMM:NF025605.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007436056.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005519.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436058.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436059.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436060.1
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007436061.1
COORDINATES: protein motif:HMM:NF017257.2
GO:0030244 - cellulose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007437279.1
COORDINATES: similar to AA sequence:RefSeq:WP_012329542.1
COORDINATES: similar to AA sequence:RefSeq:WP_007437275.1
COORDINATES: similar to AA sequence:RefSeq:WP_007004656.1
COORDINATES: similar to AA sequence:RefSeq:WP_006029672.1
COORDINATES: similar to AA sequence:RefSeq:WP_008970548.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007437271.1
COORDINATES: similar to AA sequence:RefSeq:WP_007437270.1
COORDINATES: similar to AA sequence:RefSeq:WP_018641651.1
COORDINATES: similar to AA sequence:RefSeq:WP_012255226.1
COORDINATES: similar to AA sequence:RefSeq:WP_015932767.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436026.1
COORDINATES: similar to AA sequence:RefSeq:WP_007004490.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007439603.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436028.1
COORDINATES: similar to AA sequence:RefSeq:WP_014075180.1
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008889018.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436030.1
COORDINATES: similar to AA sequence:RefSeq:WP_014105629.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436033.1
COORDINATES: similar to AA sequence:RefSeq:WP_020179010.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439611.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005191.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436041.1
COORDINATES: similar to AA sequence:RefSeq:WP_008124541.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter-2 (CPA2) family protein
COORDINATES: protein motif:HMM:NF021541.2
COORDINATES: similar to AA sequence:RefSeq:WP_003164039.1
COORDINATES: similar to AA sequence:RefSeq:WP_008968441.1
COORDINATES: similar to AA sequence:RefSeq:WP_007603595.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011927043.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007436045.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018429949.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_007003070.1
COORDINATES: similar to AA sequence:RefSeq:WP_006464367.1
COORDINATES: similar to AA sequence:RefSeq:WP_000301953.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007437555.1
COORDINATES: protein motif:HMM:NF022605.2
COORDINATES: protein motif:HMM:TIGR00413.1
septal ring lytic transglycosylase RlpA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006116631.1
GO:0003870 - 5-aminolevulinate synthase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_016553430.1
COORDINATES: similar to AA sequence:RefSeq:WP_007434958.1
COORDINATES: similar to AA sequence:RefSeq:WP_007434959.1
aconitase/3-isopropylmalate dehydratase large subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007434960.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007434961.1
isocitrate lyase/PEP mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007434962.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005483.1
COORDINATES: similar to AA sequence:RefSeq:WP_007701779.1
COORDINATES: similar to AA sequence:RefSeq:WP_017487298.1
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018270735.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_010684446.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005574.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436075.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760487.1
COORDINATES: similar to AA sequence:RefSeq:WP_007003323.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462880.1
COORDINATES: similar to AA sequence:RefSeq:WP_019015917.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007437872.1
tellurite resistance TerB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006225880.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005576.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436082.1
COORDINATES: similar to AA sequence:RefSeq:WP_012227842.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007436084.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF025173.2
COORDINATES: similar to AA sequence:RefSeq:WP_007436087.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007438275.1
COORDINATES: similar to AA sequence:RefSeq:WP_011441786.1
COORDINATES: similar to AA sequence:RefSeq:WP_019461497.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0009877 - nodulation [Evidence IEA]; GO:0009312 - oligosaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019902910.1
COORDINATES: similar to AA sequence:RefSeq:WP_018042291.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435963.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017904668.1
COORDINATES: similar to AA sequence:RefSeq:WP_017482494.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435967.1
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: protein motif:HMM:NF025151.2
COORDINATES: similar to AA sequence:RefSeq:WP_010955164.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435970.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435971.1
COORDINATES: similar to AA sequence:RefSeq:WP_018096939.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435974.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435975.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435977.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435978.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435983.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007435984.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435985.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008949530.1
COORDINATES: similar to AA sequence:RefSeq:WP_012585055.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007003051.1
COORDINATES: protein motif:HMM:NF012698.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007435990.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435991.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435992.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011633117.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460326.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435993.1
COORDINATES: similar to AA sequence:RefSeq:WP_012356292.1
COORDINATES: protein motif:HMM:NF025100.2
beta-ketoacyl synthase chain length factor
COORDINATES: similar to AA sequence:RefSeq:WP_007435996.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF039988.1
outer membrane lipoprotein carrier protein LolA
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_007436003.1
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018352.2
COORDINATES: protein motif:HMM:NF025033.2
COORDINATES: similar to AA sequence:RefSeq:WP_009520342.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436006.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006577306.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436009.1
COORDINATES: similar to AA sequence:RefSeq:WP_012332273.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_007005060.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008973830.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02772.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: protein motif:HMM:NF004628.0
COORDINATES: similar to AA sequence:RefSeq:WP_011388455.1
COORDINATES: protein motif:HMM:TIGR03951.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008199 - ferric iron binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0033214 - siderophore-dependent iron import into cell [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424909.1
COORDINATES: similar to AA sequence:RefSeq:WP_009026294.1
COORDINATES: similar to AA sequence:RefSeq:WP_007438322.1
COORDINATES: similar to AA sequence:RefSeq:WP_012753460.1
COORDINATES: similar to AA sequence:RefSeq:WP_007438324.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007003221.1
COORDINATES: similar to AA sequence:RefSeq:WP_010110366.1
COORDINATES: similar to AA sequence:RefSeq:WP_011633088.1
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_007438332.1
COORDINATES: similar to AA sequence:RefSeq:WP_007438333.1
COORDINATES: similar to AA sequence:RefSeq:WP_007001910.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019089714.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439110.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019402753.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439113.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439114.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0048029 - monosaccharide binding [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]