Roseomonas marmotae strain 1318 plasmid p1318-7.
type: Entry
definition: Roseomonas marmotae strain 1318 plasmid p1318-7.
sequence version: NZ_CP061098.1
sequence date: 2023-02-11
sequence: sequence
division: CON
label: NZ_CP061098.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15936121
keyword: RefSeq
source: Roseomonas marmotae
organism: Roseomonas marmotae
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP061098.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT v. SMRT Link v5.1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/11/2023 00:10:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,598\nCDSs (total) :: 4,525\nGenes (coding) :: 4,419\nCDSs (with protein) :: 4,419\nGenes (RNA) :: 73\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 54\nncRNAs :: 4\nPseudo Genes (total) :: 106\nCDSs (without protein) :: 106\nPseudo Genes (ambiguous residues) :: 0 of 106\nPseudo Genes (frameshifted) :: 50 of 106\nPseudo Genes (incomplete) :: 72 of 106\nPseudo Genes (internal stop) :: 15 of 106\nPseudo Genes (multiple problems) :: 27 of 106\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 39641
topology: linear
so has quality: SO_0000987
location: 1..39641
location: region:1-39641:1
RO_0002162: 2768161

NZ_CP061098
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15936121
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Zhu, W.
journal: Submitted (02-SEP-2020) National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, No. 155 Changbai Road, Changping District, Beijing 102206, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39641:1
position: 39641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-39641:1:source
so part of: sequence
organism: Roseomonas marmotae
mol type: genomic DNA
strain: 1318
host: Marmota himalayana
type material: type strain of Roseomonas marmotae
plasmid: p1318-7
country: China: Qinghai province
collection date: 2018-08

2768161
type: Taxonomy
SIO_000068: taxonomy

IAI58_RS22560
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22560
old locus tag: IAI58_22545
so part of: sequence
location: 97..744
location: region:97-744:1
so has part: feature:97-744:1:exon
subclass of: SO_0000010

position:97:1
position: 97
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744:1
position: 744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97-744:1:exon

IAI58_RS22560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22560
old locus tag: IAI58_22545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007712074.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MQTIVVASQKGGAGKTTLTSHLAVEAERQGVSPVAVIDTDPQAGLSGWFRVRKPETPALVQVLPEGLKATLDKLAEGGVPLCIIDTPPAITESIASTVALADLVLIPARPSPNDLRAVGATVDIVEEAGRPMVFVVNQAIARSKIKTETIKALSQHGPLAPVEIHHRIDFATSMTDGRTAGELDIKSASAVEITELWTYIADRLARRKRYGIASR
SIO_010081: IAI58_RS22560
subclass of: SO_0000673
so part of: IAI58_RS22560
location: 97..744
location: region:97-744:1
so has part: feature:97-744:1:exon

WP_207450877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97-744:1:exon

IAI58_RS22565
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22565
old locus tag: IAI58_22550
so part of: sequence
location: 725..976
location: region:725-976:1
so has part: feature:725-976:1:exon
subclass of: SO_0000010

position:725:1
position: 725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976:1
position: 976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725-976:1:exon

IAI58_RS22565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22565
old locus tag: IAI58_22550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASPPAKIDASLLVRKSDLPTTVAPPKPEAVVTPSGAPVREGLTIRILASDSERLRTLAYKTRQKKQTLLDEAIRQYLDKMGV
SIO_010081: IAI58_RS22565
subclass of: SO_0000673
so part of: IAI58_RS22565
location: 725..976
location: region:725-976:1
so has part: feature:725-976:1:exon

WP_207450879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:725-976:1:exon

IAI58_RS22570
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22570
old locus tag: IAI58_22555
so part of: sequence
location: 1304..1873
location: region:1304-1873:1
so has part: feature:1304-1873:1:exon
subclass of: SO_0000010

position:1304:1
position: 1304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1873:1
position: 1873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304-1873:1:exon

IAI58_RS22570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22570
old locus tag: IAI58_22555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPASPRPARAGSVRVAAWQRQRLGDADRRRIMEAARRLERRSHQPGLHGGCLKRTGILVLWTLLYRGPSRHGVCDPSLAQLAAWAGCARSTVQLALQRIEAVGIMGHVRRGITVAGRWCQWTSAYLFASPAQWALSDTEARSAEVSSVKKKAQEGRWGGEGSVLTEAERQALAAKWGLLAPTEATYGAW
SIO_010081: IAI58_RS22570
subclass of: SO_0000673
so part of: IAI58_RS22570
location: 1304..1873
location: region:1304-1873:1
so has part: feature:1304-1873:1:exon

WP_207450881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1304-1873:1:exon

IAI58_RS22575
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22575
old locus tag: IAI58_22560
so part of: sequence
location: complement(2018..2320)
location: region:2018-2320:-1
so has part: feature:2018-2320:-1:exon
subclass of: SO_0000010

position:2018:-1
position: 2018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2320:-1
position: 2320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018-2320:-1:exon

IAI58_RS22575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22575
old locus tag: IAI58_22560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAPRLLLLALTGVFLTAPLSAALADPWKHEWRYERRWERQEERRWRERERRADRAWRQEQREGRAASERDRAYEEGRADGYREGAQQNPLATIGRLLQP
SIO_010081: IAI58_RS22575
subclass of: SO_0000673
so part of: IAI58_RS22575
location: complement(2018..2320)
location: region:2018-2320:-1
so has part: feature:2018-2320:-1:exon

WP_207450883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2018-2320:-1:exon

IAI58_RS22580
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22580
old locus tag: IAI58_22565
so part of: sequence
location: complement(2645..4102)
location: region:2645-4102:-1
so has part: feature:2645-4102:-1:exon
subclass of: SO_0000010

position:2645:-1
position: 2645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4102:-1
position: 4102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2645-4102:-1:exon

IAI58_RS22580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22580
old locus tag: IAI58_22565
inference: COORDINATES: protein motif:HMM:NF015366.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate-binding protein
translation: MALMPDEEVESILARSGPRPPTPKTITDLPTLRAKGATARQDGCALALEEGLLDEIMLAAVVHDRQRRPIAVIHIAAYHRGRARPLSVRAARTSSRQAEARAFGRRTPCIPGRSWPREGGGDERLQYAAARDAGGRSRSAALFDALGALPRWRFCVCCSMENERMITRRALGFAAAVAAASPAFAQTGGWPSRPVRVIVPYGAGGATDTLCRLFCARLSAVLSQPFPVENRPGGNAVLGAEAVLRARDGHTMLFAGPGVFSATPKMQSVSYDPLRDFMGVNIVGSNGILLVVNKEFPPSTLPELVAWARANPGRLNTASSSLGTSSHLAPFTLATAAGIELTIVPYPGVPQIVADLVSGRVHAHFGSPADMLQLVQSGAVKAIALTGAHRVPQLPDVPTIAETFPGAIFTTWNGMFAPAGTPPQVVSLLSGHMLTISREPEVLRRLADLGIEPDARTPEEVDATIRQEGKEYERLLRAAGVLRAG
SIO_010081: IAI58_RS22580
subclass of: SO_0000673
so part of: IAI58_RS22580
location: complement(2645..4102)
location: region:2645-4102:-1
so has part: feature:2645-4102:-1:exon

WP_272877192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2645-4102:-1:exon

IAI58_RS22590
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22590
old locus tag: IAI58_22575
so part of: sequence
location: 4784..5566
location: region:4784-5566:1
so has part: feature:4784-5566:1:exon
subclass of: SO_0000010

position:4784:1
position: 4784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5566:1
position: 5566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4784-5566:1:exon

IAI58_RS22590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22590
old locus tag: IAI58_22575
inference: COORDINATES: protein motif:HMM:NF012955.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MRPVTSKPSGSLPRALRGNLLWTGGSLSFIYKDREVRSHISVYALKGSEKIIMVDTGHPSHWDDLERDIDRFLDGRSLDFIFLTHIEFPHIGLLPNWMRKFPDVQVYGMVSDLFHYFPDEAHRFHTVAPGDFLDLGDTKFVFVPAVWRDMNNTLWGFETRDRTLFVADAYGYMHYHDKGETDVLSSERPVPDLEALQFLNERALYWTKYADTRETFGSMDSLLDVLRPHLIAPAHGGVVDTLPAMNPLIKQGMMMMKLPV
SIO_010081: IAI58_RS22590
subclass of: SO_0000673
so part of: IAI58_RS22590
location: 4784..5566
location: region:4784-5566:1
so has part: feature:4784-5566:1:exon

WP_207451523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4784-5566:1:exon

IAI58_RS22595
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22595
old locus tag: IAI58_22580
so part of: sequence
location: 5594..6526
location: region:5594-6526:1
so has part: feature:5594-6526:1:exon
subclass of: SO_0000010

position:5594:1
position: 5594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6526:1
position: 6526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5594-6526:1:exon

IAI58_RS22595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22595
old locus tag: IAI58_22580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSKLASSATLSCTFDPSSGAELVPGLLYALGSSISLDRRPGWMPADSKGWLPMQCYVLRDLETKSLVLIDTASTGQIDAIRAGLSTLAEGTMDRQLLLARREHDCTLNLPLLTREFAVDRVATAGDLNPLDYFSSMEESYSTALVTSQIQSRFFFLRPGNIIEAGRFRIEVLRAPLRVLSTSWFYEHHTKTLFTSDSWGLLTSPTDGPPRAVTPSPAEITPESIANFMGTKFDWVKGIDTAPVIRELEDLLGGLEIDRLCPSYGLIIEGCDVVRQCIENAAEALALLARLPRPDALDTADLEQLRRICS
SIO_010081: IAI58_RS22595
subclass of: SO_0000673
so part of: IAI58_RS22595
location: 5594..6526
location: region:5594-6526:1
so has part: feature:5594-6526:1:exon

WP_208776349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5594-6526:1:exon

IAI58_RS22600
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22600
old locus tag: IAI58_22585
pseudo: true
so part of: sequence
location: complement(6543..7358)
location: region:6543-7358:-1
so has part: feature:6543-7358:-1:exon
subclass of: SO_0000010

position:6543:-1
position: 6543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7358:-1
position: 7358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6543-7358:-1:exon

IAI58_RS22600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22600
old locus tag: IAI58_22585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611187.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: IAI58_RS22600
subclass of: SO_0000673
so part of: IAI58_RS22600
location: complement(6543..7358)
location: region:6543-7358:-1
so has part: feature:6543-7358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6543-7358:-1:exon

IAI58_RS22605
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22605
old locus tag: IAI58_22590
so part of: sequence
location: complement(7445..8266)
location: region:7445-8266:-1
so has part: feature:7445-8266:-1:exon
subclass of: SO_0000010

position:7445:-1
position: 7445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8266:-1
position: 8266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7445-8266:-1:exon

IAI58_RS22605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22605
old locus tag: IAI58_22590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612204.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MWTKEHRARQAGFERRRYPTDLTDQEWRVIRPLLPPSSTRGRRPGVDLREVLNAIRYLARAGCGWRMLPVHFGPWQTIYWWFRRLARRFLFATLHNIALMLDRERVGREASPSAGVLDSQTVKSPQALGGGGFDAAKRLKGRKRHIAVDTDGRLLMVNLTTADVQDASGAEQIVKAIRKRWPWLKHLFADGAYDRGKLMSAAAFHDFVIEVVRKLTDQQGFQVLPRRWVVERTFGWMTRWRRLVRDYERRCDVSEAMIHVSMGALLVRRIAHP
SIO_010081: IAI58_RS22605
subclass of: SO_0000673
so part of: IAI58_RS22605
location: complement(7445..8266)
location: region:7445-8266:-1
so has part: feature:7445-8266:-1:exon

WP_208776004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7445-8266:-1:exon

IAI58_RS23210
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS23210
so part of: sequence
location: complement(9004..9396)
location: region:9004-9396:-1
so has part: feature:9004-9396:-1:exon
subclass of: SO_0000010

position:9004:-1
position: 9004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9396:-1
position: 9396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9004-9396:-1:exon

IAI58_RS23210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS23210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPEALCGSRTQHIGRRALALNAFMMFGMPVAPSDPEDCTLCAGLGLSSHQGYLLTVFIWLGEHDSVSLNPDFRSEGGRADQHQQRSIQMPDDDGNRGWWRSPLNALMVSAAVIVGMIVIGTAVVLWFIF
SIO_010081: IAI58_RS23210
subclass of: SO_0000673
so part of: IAI58_RS23210
location: complement(9004..9396)
location: region:9004-9396:-1
so has part: feature:9004-9396:-1:exon

WP_237182989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9004-9396:-1:exon

IAI58_RS22615
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22615
old locus tag: IAI58_22600
so part of: sequence
location: 9685..10725
location: region:9685-10725:1
so has part: feature:9685-10725:1:exon
subclass of: SO_0000010

position:9685:1
position: 9685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10725:1
position: 10725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9685-10725:1:exon

IAI58_RS22615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22615
old locus tag: IAI58_22600
inference: COORDINATES: protein motif:HMM:NF024109.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MTGKGIPMASSRVTVGLAAAAAALAGMALQVRANARRAEREHPPAGRFIHAGGIRLHYLEAGMGGPPVVLLHGNAVQAEDYVASGVFGLAAERHRVLAFDRPGYGYSERPRDRPWTAEAQAAVLAEALARLGIRRAIVVGHSWGTLTALALALNHPEAVGGLVLLSGYYFPTARADVAMISPTALPVLGDAIRYTVGPLVGRLMAPMMVRTMFAPVPVPAAFTSAVPTSMMLRPWQIKASAEDAAAMIPAAAALVERYGELSRLPVSIIAGAEDMVVDRDRQSARLHREIAASSLQVVSGLGHMVHHGAPDLVAQAIEAIAAPEQPVSAAMTASDVTAEEHTTDIG
SIO_010081: IAI58_RS22615
subclass of: SO_0000673
so part of: IAI58_RS22615
location: 9685..10725
location: region:9685-10725:1
so has part: feature:9685-10725:1:exon

WP_208776351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9685-10725:1:exon

IAI58_RS22620
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22620
old locus tag: IAI58_22605
so part of: sequence
location: 11316..12560
location: region:11316-12560:1
so has part: feature:11316-12560:1:exon
subclass of: SO_0000010

position:11316:1
position: 11316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12560:1
position: 12560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11316-12560:1:exon

IAI58_RS22620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22620
old locus tag: IAI58_22605
inference: COORDINATES: protein motif:HMM:TIGR00229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MPAQRKSRTRQGQAQSERAVVDLAALGGPFVEAFDATRMPMAITDPNVAGNPIIYCNAAFLQMCGYDRKEVLGQDYFFLIGRHTDPSVAQRIKDAVAARREFTEDILFHTKDGREIWVAALVDPMVENDRVVRHFVSFLDITDRVQRVQGLREAKATLDRRVTARTKRLQHAKDKLEEEVERRRRTEALLRDSLAEGEVALSFRDFLIQEVHHRTKNALQLATALLQLQARQSEPLVRSALDVATGRLMRIGEVHEMLAYQSETPNTIEVAPYLLRLGQSMVEGLVTKPGQIEVEVEADEEAVWSPDVVIPLGLIVGEAVTNAFKYAFPEGRRGRILVDLSLADDGLVRLRIEDDGIGLPPSRRKGSLGLKLIETLAQQIQGKVEIVSREGRTGTAVSVTFPDPNTAAGHSDQL
SIO_010081: IAI58_RS22620
subclass of: SO_0000673
so part of: IAI58_RS22620
location: 11316..12560
location: region:11316-12560:1
so has part: feature:11316-12560:1:exon

WP_208776352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11316-12560:1:exon

IAI58_RS22625
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22625
old locus tag: IAI58_22610
so part of: sequence
location: complement(12691..12894)
location: region:12691-12894:-1
so has part: feature:12691-12894:-1:exon
subclass of: SO_0000010

position:12691:-1
position: 12691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12894:-1
position: 12894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12691-12894:-1:exon

IAI58_RS22625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22625
old locus tag: IAI58_22610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007436863.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MSIGTVKWFNSTKGFGFIQPEDGSKDVFLHISDVQRAGMDVREGDKIAYDVQSGQQGKLSAGNLRQA
SIO_010081: IAI58_RS22625
subclass of: SO_0000673
so part of: IAI58_RS22625
location: complement(12691..12894)
location: region:12691-12894:-1
so has part: feature:12691-12894:-1:exon

WP_207451297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12691-12894:-1:exon

IAI58_RS22630
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22630
old locus tag: IAI58_22615
so part of: sequence
location: complement(13818..14255)
location: region:13818-14255:-1
so has part: feature:13818-14255:-1:exon
subclass of: SO_0000010

position:13818:-1
position: 13818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14255:-1
position: 14255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13818-14255:-1:exon

IAI58_RS22630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22630
old locus tag: IAI58_22615
inference: COORDINATES: protein motif:HMM:NF021438.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2147 domain-containing protein
translation: MAALISLVASCTAAWAAVPGGVWLIDGKAAVQIFECSGQLCGRILWLQTPRDTQGQLNRDKNNPDPGLRQRRLCGLTVLWGLHATGPDRWGGGWFYNPDDGKTYNVTAELRTADLIVARIYSGVRLFGKTKTLLRVPHGTSEGWC
SIO_010081: IAI58_RS22630
subclass of: SO_0000673
so part of: IAI58_RS22630
location: complement(13818..14255)
location: region:13818-14255:-1
so has part: feature:13818-14255:-1:exon

WP_207451301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13818-14255:-1:exon

IAI58_RS22635
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22635
old locus tag: IAI58_22620
so part of: sequence
location: complement(14960..15319)
location: region:14960-15319:-1
so has part: feature:14960-15319:-1:exon
subclass of: SO_0000010

position:14960:-1
position: 14960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15319:-1
position: 15319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14960-15319:-1:exon

IAI58_RS22635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22635
old locus tag: IAI58_22620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007436948.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease signature motif containing protein
translation: MGNPARRRAPLKMATQLLPAADLRTARPPPKQASDHYGTPEHRAWAAAVLGRAGSRCQGPGCGRTGTRLYADHIVELQDGGAPLALANGQALCGACHSAKTARVRAERQRTPPPPQRRP
SIO_010081: IAI58_RS22635
subclass of: SO_0000673
so part of: IAI58_RS22635
location: complement(14960..15319)
location: region:14960-15319:-1
so has part: feature:14960-15319:-1:exon

WP_208776353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14960-15319:-1:exon

IAI58_RS22640
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22640
old locus tag: IAI58_22625
so part of: sequence
location: complement(15319..15645)
location: region:15319-15645:-1
so has part: feature:15319-15645:-1:exon
subclass of: SO_0000010

position:15645:-1
position: 15645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15319-15645:-1:exon

IAI58_RS22640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22640
old locus tag: IAI58_22625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQQRTPRLPALLAGRSLAVAYRIATTDFGWRPIAQDRYLTPEGEEVRAVADRSSFHVGLPLGTRIYLLDSWQLRDDWRRIDGLLQIGNLVRAPLPLVRMPRLSAAAR
SIO_010081: IAI58_RS22640
subclass of: SO_0000673
so part of: IAI58_RS22640
location: complement(15319..15645)
location: region:15319-15645:-1
so has part: feature:15319-15645:-1:exon

WP_208776354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15319-15645:-1:exon

IAI58_RS22645
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22645
old locus tag: IAI58_22630
so part of: sequence
location: complement(15645..16007)
location: region:15645-16007:-1
so has part: feature:15645-16007:-1:exon
subclass of: SO_0000010

position:16007:-1
position: 16007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15645-16007:-1:exon

IAI58_RS22645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22645
old locus tag: IAI58_22630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATPAKPRAKKAAPPPEATPAPAGTNHPVITDPALVKLAAEYAKAAPEKNRLEKRLKELKPVLLQAMGDAPLAYAGKLVLTRTEVLGTLDTVGEKITRSMVGQHMPGKKGRPAYVTLEVR
SIO_010081: IAI58_RS22645
subclass of: SO_0000673
so part of: IAI58_RS22645
location: complement(15645..16007)
location: region:15645-16007:-1
so has part: feature:15645-16007:-1:exon

WP_208776355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15645-16007:-1:exon

IAI58_RS22650
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22650
old locus tag: IAI58_22635
so part of: sequence
location: complement(16007..16723)
location: region:16007-16723:-1
so has part: feature:16007-16723:-1:exon
subclass of: SO_0000010

position:16723:-1
position: 16723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16007-16723:-1:exon

IAI58_RS22650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22650
old locus tag: IAI58_22635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012454283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MARKTPLKRLGGGDGVPGFIAYYRVSTDKQGASGLGLEAQQEAVERHVRAAGGRILDVFREVESGKKNDRPEIAAAIAACRSRRATLVIAKLDRLARNVAFVSNLMEAGIEFVACDNPHASRLTIHILAAVAEHEREMISARTKAALQAAKARGVRLGNPHLRAGDGGAISHATQIRIAKAAQHARDVLPAILAAQKAGCANPSQIAEALTARGIRTPAGGDVWHPVQVARILKRTSA
SIO_010081: IAI58_RS22650
subclass of: SO_0000673
so part of: IAI58_RS22650
location: complement(16007..16723)
location: region:16007-16723:-1
so has part: feature:16007-16723:-1:exon

WP_208776356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16007-16723:-1:exon

IAI58_RS23215
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS23215
so part of: sequence
location: 17155..17406
location: region:17155-17406:1
so has part: feature:17155-17406:1:exon
subclass of: SO_0000010

position:17155:1
position: 17155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17406:1
position: 17406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17155-17406:1:exon

IAI58_RS23215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS23215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHEIDAALAVEPVEAFHHVIGLTGARDPLNVEHRASPVAARQQGGHRPEPRLVNGDEGSRAPTRARRRVGGEGHMQVSRWVAS
SIO_010081: IAI58_RS23215
subclass of: SO_0000673
so part of: IAI58_RS23215
location: 17155..17406
location: region:17155-17406:1
so has part: feature:17155-17406:1:exon

WP_237182990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17155-17406:1:exon

IAI58_RS22660
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22660
old locus tag: IAI58_22645
so part of: sequence
location: complement(17495..18202)
location: region:17495-18202:-1
so has part: feature:17495-18202:-1:exon
subclass of: SO_0000010

position:17495:-1
position: 17495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18202:-1
position: 18202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17495-18202:-1:exon

IAI58_RS22660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22660
old locus tag: IAI58_22645
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADLDDACRPKRTILTLPAGAMPRQMPAPLAEVVIFDEARQLPAPHVTTDEEADEARQRGAQERQRERASRAQAAEILRRRREGEEGEDDGEAMLARPYRNVPIAFLSDDTLEAALTRQFADAHLIDRMWDAGQLNDWQYATANRLLQLCDEAGMLASKVALIGRSGTGHAEMSDAMAAAHATWKRLMAEIGYPGDELLISLCQGELTVRGQAARAAALVAGLRHLAQRWGIDMT
SIO_010081: IAI58_RS22660
subclass of: SO_0000673
so part of: IAI58_RS22660
location: complement(17495..18202)
location: region:17495-18202:-1
so has part: feature:17495-18202:-1:exon

WP_208776357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17495-18202:-1:exon

IAI58_RS22665
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22665
old locus tag: IAI58_22650
so part of: sequence
location: complement(18286..19275)
location: region:18286-19275:-1
so has part: feature:18286-19275:-1:exon
subclass of: SO_0000010

position:18286:-1
position: 18286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19275:-1
position: 19275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18286-19275:-1:exon

IAI58_RS22665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22665
old locus tag: IAI58_22650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIDCMNWVKNLCPKFIKSSPRQLLKELADFADEQDECYPSVALLHEVTSQSIRTIHTNLRILQEMELIKISKRPNRSSRYKINRHLPFPNRQSRKRGAKSAYTRNPRPLDSKTSAYDQHGLEGRPCNTRVDAKSAPTPANAAWGAESVSPGVQNLSSRGAKSAHKPPKNHQRTTRGRGARVRATPAPLPPSWQPSAGDAAYARRLGLDPAAVADRFRKHQRASGRACADWSARWELWCDEDAQKAGLASAGAAPAGDAAPAPAEDEQVRRVRCWVERWQAKAAAGQSTQATESVMASVCPEALALVRQRKPEVFRVASAAAGFSFTGM
SIO_010081: IAI58_RS22665
subclass of: SO_0000673
so part of: IAI58_RS22665
location: complement(18286..19275)
location: region:18286-19275:-1
so has part: feature:18286-19275:-1:exon

WP_208776358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18286-19275:-1:exon

IAI58_RS23220
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS23220
so part of: sequence
location: 19464..19871
location: region:19464-19871:1
so has part: feature:19464-19871:1:exon
subclass of: SO_0000010

position:19464:1
position: 19464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19871:1
position: 19871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19464-19871:1:exon

IAI58_RS23220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS23220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRMPSQSMAAHGGGVAESAIIMPLWPVDDVRQPRPAGSAGCDAGPIWAPAQMSGFGSAYAIEPMLEIKVALHKKRERIKALHHATSFTSFVKSVAVTLPSVACSMASSFGQDGRSTPVSHRHTVIAPTPTRAAN
SIO_010081: IAI58_RS23220
subclass of: SO_0000673
so part of: IAI58_RS23220
location: 19464..19871
location: region:19464-19871:1
so has part: feature:19464-19871:1:exon

WP_237182991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19464-19871:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 2768161
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 20687..20707
rpt unit seq: cccctcatggggatggttcac
so part of: sequence
location: 20624..20840
location: region:20624-20840:1
so has part: feature:20624-20840:1:region

position:20624:1
position: 20624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20840:1
position: 20840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20624-20840:1:region

IAI58_RS22675
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22675
old locus tag: IAI58_22660
so part of: sequence
location: complement(20889..21601)
location: region:20889-21601:-1
so has part: feature:20889-21601:-1:exon
subclass of: SO_0000010

position:20889:-1
position: 20889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21601:-1
position: 21601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20889-21601:-1:exon

IAI58_RS22675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22675
old locus tag: IAI58_22660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611663.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MEPHLPRGRPGKPRVDDRRVISGILHVLKTGCRWRDVPAAYGPPTTIYNRFNRWSGRGLWQRLFAKMAASGEIPQELSLDSSHVKAHRSAAGGKGGSGTQAVGRSRGGRTSKIHCLADDRGRPVAFALTPGNTADISMALPLLGAVAAPKCLIADKAYDAESLRRWLKERRIKAVIPSTATRTRPYPLDRQAYRRRNQIERLFCRLKNWRRVATRYDRLAQNYLASLALIAAVTEWI
SIO_010081: IAI58_RS22675
subclass of: SO_0000673
so part of: IAI58_RS22675
location: complement(join(20889..21310,21310..21601))
location: region:20889-21601:-1
so has part: feature:21310-21601:-1:exon
so has part: feature:20889-21310:-1:exon

WP_208776367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21310-21601:-1:exon

position:21310:-1
position: 21310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20889-21310:-1:exon

IAI58_RS22680
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22680
old locus tag: IAI58_22665
so part of: sequence
location: complement(21696..22733)
location: region:21696-22733:-1
so has part: feature:21696-22733:-1:exon
subclass of: SO_0000010

position:21696:-1
position: 21696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22733:-1
position: 22733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21696-22733:-1:exon

IAI58_RS22680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22680
old locus tag: IAI58_22665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013651458.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS481 family transposase
translation: MTREQKIIRGKVGVLELAKQLGSVSQACKIMGYSRDSFYRFKDLYEKGGEVALQELSRRKPNLKNRIDPAIEAAVVEMAIDQPAWGQLRVSNELRKQGVSVSSFGVRNIWLRHDLTSMKARLKALEARVAQEGLVLTEAQLAALERVKQEKEAHGEFESECPGYCGAQDTFYVGNLKGVGRIYQQTFVDTYSKVAFAKLYDRKTPITAADLLNDRVLPFFEDHGIPLLRILTDRGTEFCGSPERHDYELYLAVEDVDHSRTKTKSPQTNGIVERLHKTMLHEFYQIAFRKKLYRAIDELQRDLDAWLAEYNEVRSHQGRWCYGKTPMQTFLAALPLAQEKTLQAQ
SIO_010081: IAI58_RS22680
subclass of: SO_0000673
so part of: IAI58_RS22680
location: complement(21696..22733)
location: region:21696-22733:-1
so has part: feature:21696-22733:-1:exon

WP_208776359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21696-22733:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 2768161
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 22945..22972
rpt unit seq: ctcctgacccctcatggggatggttcac
so part of: sequence
location: 22945..25269
location: region:22945-25269:1
so has part: feature:22945-25269:1:region

position:22945:1
position: 22945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25269:1
position: 25269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22945-25269:1:region

IAI58_RS22685
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: cas2
locus tag: IAI58_RS22685
old locus tag: IAI58_22670
so part of: sequence
location: complement(25392..25691)
location: region:25392-25691:-1
so has part: feature:25392-25691:-1:exon
subclass of: SO_0000010

position:25392:-1
position: 25392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25691:-1
position: 25691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25392-25691:-1:exon

IAI58_RS22685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: cas2
locus tag: IAI58_RS22685
old locus tag: IAI58_22670
inference: COORDINATES: protein motif:HMM:TIGR01573.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MYVLITYDVEARRTRRFHKLLSRYLVQEQNSVFGGEMTNATLLRLHRELAKIARDDDRVFQVIAENRHNVAVSLLCKSDTNATLRNVAHDHHIKNNMVL
SIO_010081: IAI58_RS22685
subclass of: SO_0000673
so part of: IAI58_RS22685
location: complement(25392..25691)
location: region:25392-25691:-1
so has part: feature:25392-25691:-1:exon

WP_208776360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25392-25691:-1:exon

IAI58_RS22690
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: cas1
locus tag: IAI58_RS22690
old locus tag: IAI58_22675
so part of: sequence
location: complement(25699..26676)
location: region:25699-26676:-1
so has part: feature:25699-26676:-1:exon
subclass of: SO_0000010

position:25699:-1
position: 25699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26676:-1
position: 26676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25699-26676:-1:exon

IAI58_RS22690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: cas1
locus tag: IAI58_RS22690
old locus tag: IAI58_22675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018632668.1
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas1
translation: MMETLFVSRDCVLERDGGTLMIRRKTEMPRRFPVHALRHVVVAGEARLTTAVLILLARSGIRLTVLDHYGNASGAFESVGSPASGTVRLAQARHVLDPALRLDLARRIVRGTLRNLRANLNYRIYRGKAALRTSAAAITALEEKLDGAKTIEALMGLEGNARAFYYEAWPMIDERLNFGPRVRRPPNNPINCLLSWFNGLCYAAMRHAIAQTHLDSCLAMLHSPNAARHSLALDLSEPFKPVLTDTLIFETVLRGQIDPGWFYQEEGVCRLSETGRQQTLQLWTTKVEAAGKDGQSLQAAMRAEALALERHVLGLGQYKPFLRSV
SIO_010081: IAI58_RS22690
subclass of: SO_0000673
so part of: IAI58_RS22690
location: complement(25699..26676)
location: region:25699-26676:-1
so has part: feature:25699-26676:-1:exon

WP_207450915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25699-26676:-1:exon

IAI58_RS22695
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22695
old locus tag: IAI58_22680
so part of: sequence
location: complement(26673..27224)
location: region:26673-27224:-1
so has part: feature:26673-27224:-1:exon
subclass of: SO_0000010

position:26673:-1
position: 26673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27224:-1
position: 27224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26673-27224:-1:exon

IAI58_RS22695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22695
old locus tag: IAI58_22680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006748797.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Dna2/Cas4 domain-containing protein
translation: MSTPVSPLATVRRFAEIVTRADLSGLAFQHLALCRRRAWLHLQRIDYAHLDEHMQRGLALHDMSRPRDHSVAGLIGLAPDRIDWSGRQVYEAKGSAGAADAVSRQGAFYALMLWAAQGKPWQAIAHILPAKRERSIMLDPKMVNDMLEAAEALEALRDTADPPTVAFTSFCAQCSYRHLCGVG
SIO_010081: IAI58_RS22695
subclass of: SO_0000673
so part of: IAI58_RS22695
location: complement(26673..27224)
location: region:26673-27224:-1
so has part: feature:26673-27224:-1:exon

WP_207450907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26673-27224:-1:exon

IAI58_RS22700
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22700
old locus tag: IAI58_22685
so part of: sequence
location: complement(27221..29218)
location: region:27221-29218:-1
so has part: feature:27221-29218:-1:exon
subclass of: SO_0000010

position:27221:-1
position: 27221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29218:-1
position: 29218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27221-29218:-1:exon

IAI58_RS22700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22700
old locus tag: IAI58_22685
inference: COORDINATES: protein motif:HMM:NF012492.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MTADLSLVIARHAVPSGPDGLSPLQARILSEPAPVRVFSAPTGAGKSHAFIRAAADGQRVLFIVPTRRLAQNLAQDAAAALAQLDPPRPDAVGLWSSDETQRQKQRDPSYRPWSARIRQVTDFDGTRFIVATPESVALMLLRYAGSGPGSDPFGASYLAQYLDHIVFDEFHAIDPRGFGLCAFVACLCAAIEGPRVTFLSATPVDIVPVLAALGIPADRVVVGAETVLDDPPSQPEQVTPGLRVLHGDVRLNFVTEPDMTALLEKHAEEVEACLARQKQVVVIFDSLEELQKQKQALATVLSRFRILPNRRLAINSIDDSAQGSSLDGLFVTDRNADPRTFDVLIATSSVEMGVTFRAGMLVMDAGHDALSFVQRVGRVARADEPGLVVVRRDPSREHRQPWLRTMLMALEEEGTGQRIPVSRFLDVVLRSIRQRFAVPAGVLEADDVPKAFRTMPQRAVWAACLFWHALERARPRHLAGQETVLRRLAPAKVRKVAALLQTVAGDDTGRTGFGADWARAFLKQAETLRDIAPTVVVQEPGRRLDAVPLHWINRYPVLQAFPLVADEKGNWTLFLDRPLHEVLRSGESVYSRKERSVLLPNGQRYRVPAAEAVSRAVTEMAILERRPGTSARLAAQLRAATELVRLSGLIPDEEALEAVRGTAIL
SIO_010081: IAI58_RS22700
subclass of: SO_0000673
so part of: IAI58_RS22700
location: complement(27221..29218)
location: region:27221-29218:-1
so has part: feature:27221-29218:-1:exon

WP_207450905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27221-29218:-1:exon

IAI58_RS22705
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22705
old locus tag: IAI58_22690
so part of: sequence
location: complement(29215..29898)
location: region:29215-29898:-1
so has part: feature:29215-29898:-1:exon
subclass of: SO_0000010

position:29215:-1
position: 29215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29898:-1
position: 29898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29215-29898:-1:exon

IAI58_RS22705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22705
old locus tag: IAI58_22690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006748799.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDRAVAVTGVRATVLSPFHYHSLAVPGGTATQPNFLTDRQVSFALGAALGCLAPSPALPRKDYRTHLSALPFLASVFRTAEPRLLPPMARRLNLDEDAGLTKAVQDATGTGNLKTYFFVQEVPPGVEYYGAVFGADPFALAAQAEGHPCREIVVRTGRHLGGLLRLQPIEPGSVHLNVHTAALFGQDRDLSVSIFAMHDLQLTPLMTVEQAAAQVGRWRSFAPIMV
SIO_010081: IAI58_RS22705
subclass of: SO_0000673
so part of: IAI58_RS22705
location: complement(29215..29898)
location: region:29215-29898:-1
so has part: feature:29215-29898:-1:exon

WP_207450896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29215-29898:-1:exon

IAI58_RS22710
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: cas7d
locus tag: IAI58_RS22710
old locus tag: IAI58_22695
so part of: sequence
location: complement(29898..30953)
location: region:29898-30953:-1
so has part: feature:29898-30953:-1:exon
subclass of: SO_0000010

position:30953:-1
position: 30953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29898-30953:-1:exon

IAI58_RS22710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: cas7d
locus tag: IAI58_RS22710
old locus tag: IAI58_22695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006748800.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-D CRISPR-associated protein Cas7/Csc2
translation: MTDLSPIHPFLGSLSKLADHASKEGKAYVQPALKNLGAITIPIIREVISPASFRNTDPEVTDITVDKVRRVRAVANKFKYGEKRRGLQVLRFFGAGGTMALNRTDFGDSDPISKGYNLNTVVFGDSANRGKYVLPVKAGVQYSDAISLAPYGSCVDETFHNRAAEDGSLWDSAEGKNSVNLFSRHYVTPGTLLLQVLTINGCTLPPEALEHLLLCVGLAGAYGGQTSIYGVNVRNHVVGIFGARMERAVASPYEAVRHLPSPLPADAAGAVAALADIYAAAYPVQIPAGAVADLIAARIAAVEADDAALRTQYRSVHGTVGAFFDAWFAMGGESAKKGSKRKPATTLADAG
SIO_010081: IAI58_RS22710
subclass of: SO_0000673
so part of: IAI58_RS22710
location: complement(29898..30953)
location: region:29898-30953:-1
so has part: feature:29898-30953:-1:exon

WP_207450894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29898-30953:-1:exon

IAI58_RS22715
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22715
old locus tag: IAI58_22700
so part of: sequence
location: complement(30981..33899)
location: region:30981-33899:-1
so has part: feature:30981-33899:-1:exon
subclass of: SO_0000010

position:30981:-1
position: 30981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33899:-1
position: 33899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30981-33899:-1:exon

IAI58_RS22715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22715
old locus tag: IAI58_22700
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGVAYEVCLHFLQAVVQDRVFSDAERTRGSRPLDEGQRRQLETSQRVDTRSPALTRISGKGGWRADGAYAVFTNVTLLDHLLSVVRGALQFAEMDLTGRGSRPPEELRRRLAAVAAVAFLHDSDKMLDLSRSATRGGALDAAAIGGLMDRFGITAFLEGYGVPLSATQMLELINGVEVTRTEGLVRLPREHWHDRMYVRLADRVDGAFLQTQPTETRPHFGVDGALREIAGFSGLDTGAVQLGGEGWRVVELRDPHTPFLLDAFQAGLSAICLDHHGIPPLIELHHDGRLLVVLPRRDSDALIAQALGRVTGDLGARIRVATNARGKVDLLDAPGDLEDLRASVAAMQAREREGVLRAGIDALREHGAEIDALLRPVDFLPRTPDLASYAGRLVPLWTGTATFEDHLAETHRNAVLVSATLSCTDPPARLNIPGADQREAELRALLNDTGALTAWPDWLDAVSVDTRRALLAAYAAAAAQQNDALMEQLLGPDGLVALWLEGREDRPGLAAAIDHAGVRLRAAVEAHYGALLAGQFIATDEAAEGRCHFTNTPVPRTARIDGKTGLYGVNVSAFSGRDGRPESFRSSASETLVSPIAEAEHKLRRLQYERSGRSAGGRRVPVTVTSPTTAGLFGALPFGNDADPAEFALADLLRAKIEPGKLTYPDAEAALRRTRVARFEELPDRMIGSGTEPGQIAFTAMVFEAALRTGRPVHVFRGLPRERPEFVVFDTLSQPLVSLLEGDAFRLEQIPHCLQLLRGVEAVAEATGFGLELALRLCEPATRFGAACDALARADRRIATSSQDLALRKIQSFSLNLLENHAVSSPSDTAILSFAEAMARVQRKPISSDGANMAELGLRTALTTVEALERMRQIGTESLVAGIAGELEKVMTRGGLRVRAELRGGQSFETVVEAAARVFVTDVWYGAFDATLPSSRDRRVALAVYRHGFQSASSRLYARNGIPATEDSEQAA
SIO_010081: IAI58_RS22715
subclass of: SO_0000673
so part of: IAI58_RS22715
location: complement(30981..33899)
location: region:30981-33899:-1
so has part: feature:30981-33899:-1:exon

WP_208776361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30981-33899:-1:exon

IAI58_RS22720
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22720
old locus tag: IAI58_22705
so part of: sequence
location: complement(33910..34644)
location: region:33910-34644:-1
so has part: feature:33910-34644:-1:exon
subclass of: SO_0000010

position:33910:-1
position: 33910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34644:-1
position: 34644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33910-34644:-1:exon

IAI58_RS22720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22720
old locus tag: IAI58_22705
inference: COORDINATES: protein motif:HMM:NF013997.2
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endoribonuclease Cas6
translation: MRYRNISRRLAMPRVTLDLPRPVQFRYLDTMHAALVTALRRAGVEEQQVIGATAAPWTFGISGRSFAGGRVRVNSVTLSTPDPALGAAMLRITGADACVRSSNGDVLDLTGATCRPVPVPLHPDQERLAIGFASPFLVSERGTKKAYVRSLAGLDLSAAFSAGLSRRLRRPVTLQVEQDRLSAVTEGAAPMLVRVRRSGTRDLILPALSAVLTLCGKPADLRDAYLAGLGEKTRYGFGCPVALA
SIO_010081: IAI58_RS22720
subclass of: SO_0000673
so part of: IAI58_RS22720
location: complement(33910..34644)
location: region:33910-34644:-1
so has part: feature:33910-34644:-1:exon

WP_208776362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33910-34644:-1:exon

IAI58_RS22725
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22725
old locus tag: IAI58_22710
so part of: sequence
location: 34768..35526
location: region:34768-35526:1
so has part: feature:34768-35526:1:exon
subclass of: SO_0000010

position:34768:1
position: 34768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35526:1
position: 35526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34768-35526:1:exon

IAI58_RS22725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22725
old locus tag: IAI58_22710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQRELGHLLGYTQRRLTDLLRDCFECRGGSTVRYDAASKRMHSVVASAKLYGPKTASEAVTILQAAQLWNDQAIPGLACPVVDTRAYRREPASDIFRMLLGACARRQVVDIVYLAKTRQLAVSFSPHALVVGPHRAHFRGYSMFELEGESHWWDLVPSRVVSAAVRPRLGYVGAQNDVEWHTDTKLCLRLRADLPEALRQAIRHDNGMDGDLLTIEPIRQALRRYVLADYMERRYERMKESVWEIVSEQRV
SIO_010081: IAI58_RS22725
subclass of: SO_0000673
so part of: IAI58_RS22725
location: 34768..35526
location: region:34768-35526:1
so has part: feature:34768-35526:1:exon

WP_207450887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34768-35526:1:exon

IAI58_RS22730
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22730
old locus tag: IAI58_22715
so part of: sequence
location: complement(35734..36243)
location: region:35734-36243:-1
so has part: feature:35734-36243:-1:exon
subclass of: SO_0000010

position:35734:-1
position: 35734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36243:-1
position: 36243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35734-36243:-1:exon

IAI58_RS22730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22730
old locus tag: IAI58_22715
inference: COORDINATES: protein motif:HMM:TIGR02595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PEP-CTERM sorting domain-containing protein
translation: MNASLTLTDAAWDRMFGLAISNENGQPATITLDKVLDFSVYIYSGGQLMDAWDLSSMVRSASDATASPQFQILINGGAGMGINGIMRISDSDYMIEAYFTGADFIGRFSSDDDATYGCSSSPCLFSGHNNLVRRPGLPGGNPTPVPEPASMALFGLGLVGLAYARARLK
SIO_010081: IAI58_RS22730
subclass of: SO_0000673
so part of: IAI58_RS22730
location: complement(35734..36243)
location: region:35734-36243:-1
so has part: feature:35734-36243:-1:exon

WP_207450885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35734-36243:-1:exon

IAI58_RS22735
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22735
old locus tag: IAI58_22720
so part of: sequence
location: 36778..36918
location: region:36778-36918:1
so has part: feature:36778-36918:1:exon
subclass of: SO_0000010

position:36778:1
position: 36778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36918:1
position: 36918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36778-36918:1:exon

IAI58_RS22735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22735
old locus tag: IAI58_22720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDATMDVKTQAPEDAARSVRVEVREPDGAPNWTMSYEKLSGFLQS
SIO_010081: IAI58_RS22735
subclass of: SO_0000673
so part of: IAI58_RS22735
location: 36778..36918
location: region:36778-36918:1
so has part: feature:36778-36918:1:exon

WP_207450865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36778-36918:1:exon

IAI58_RS22740
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22740
old locus tag: IAI58_22725
so part of: sequence
location: complement(37198..37410)
location: region:37198-37410:-1
so has part: feature:37198-37410:-1:exon
subclass of: SO_0000010

position:37198:-1
position: 37198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37410:-1
position: 37410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37198-37410:-1:exon

IAI58_RS22740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22740
old locus tag: IAI58_22725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVDGLVRRRPFDLVQALANALRFDEAFAIREALREIMTARILPVRPAVIKKKPRQEIQPGLSSSQRRPR
SIO_010081: IAI58_RS22740
subclass of: SO_0000673
so part of: IAI58_RS22740
location: complement(37198..37410)
location: region:37198-37410:-1
so has part: feature:37198-37410:-1:exon

WP_208776363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37198-37410:-1:exon

IAI58_RS22745
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22745
old locus tag: IAI58_22730
so part of: sequence
location: 37558..37794
location: region:37558-37794:1
so has part: feature:37558-37794:1:exon
subclass of: SO_0000010

position:37558:1
position: 37558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37794:1
position: 37794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37558-37794:1:exon

IAI58_RS22745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22745
old locus tag: IAI58_22730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNAAFKIGQVVAFGRGAGDGHIRGNAFTVTRVMPLESGFRSYRVRGQDGMERAFQESQLRPGAVASQTGQKVEVWPT
SIO_010081: IAI58_RS22745
subclass of: SO_0000673
so part of: IAI58_RS22745
location: 37558..37794
location: region:37558-37794:1
so has part: feature:37558-37794:1:exon

WP_208776364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37558-37794:1:exon

IAI58_RS22750
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22750
old locus tag: IAI58_22735
so part of: sequence
location: complement(37831..39132)
location: region:37831-39132:-1
so has part: feature:37831-39132:-1:exon
subclass of: SO_0000010

position:37831:-1
position: 37831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39132:-1
position: 39132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37831-39132:-1:exon

IAI58_RS22750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22750
old locus tag: IAI58_22735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008835009.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sorbosone dehydrogenase family protein
translation: MSVSGLFAQLVALVGSGTVAIRRMTDGTPIPAWGKTPAIPAAKPQGAIPTLKMPTAKGWHDGRVPIAAPGLRVNAFATGLDHPRWLCVLPNGDVLVAESSSVARPARSIWDYAQISTMKRAAAMGVSANRITLLRDADGDGVAEIRETFLENLNQPFGMALVGNTFYVGNTDGLVAFPYETGATSIQAPGRQICDFKPGGHWTRSLLISPDQTKLYVGVGSMTNIADNGLEEEEGRAAIHEVDLATGHRRIFATGLRNAVGMAWEPHKGALWTVVNERDGLGDETPPDYLTSVRDGGFYGWPYCYWDRVIDHRVPQDAAQVASAITPDYALGGHTASLGLCWLPAGTLPGFPEGMAIGQHGSWNRSILSGYKLVFIPFANGHPDGPPRDILSGFLSPDEKESYGRPVGVHIGPDGALLMADDVGDIVWRVTGD
SIO_010081: IAI58_RS22750
subclass of: SO_0000673
so part of: IAI58_RS22750
location: complement(37831..39132)
location: region:37831-39132:-1
so has part: feature:37831-39132:-1:exon

WP_208776365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37831-39132:-1:exon

IAI58_RS22755
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22755
so part of: sequence
location: complement(39386..>39641)
location: region:39386-39641:-1
so has part: feature:39386-39641:-1:exon
subclass of: SO_0000010

position:39386:-1
position: 39386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39641:-1
position: 39641
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39386-39641:-1:exon

IAI58_RS22755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22755
inference: COORDINATES: protein motif:HMM:NF014045.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 2
transl table: 11
product: NYN domain-containing protein
translation: PLLQIDPPPRRLLPIGRAARLAQPGRERITLVAGDGDYEPMVRQLVQDGFEVTLLYWAHASRELQAVASRFYPLDDDLEDLALR
SIO_010081: IAI58_RS22755
subclass of: SO_0000673
so part of: IAI58_RS22755
location: complement(39386..>39641)
location: region:39386-39641:-1
so has part: feature:39386-39641:-1:exon

WP_208776366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39386-39641:-1:exon