Roseomonas marmotae strain 1318 plasmid p1318-5.
type: Entry
definition: Roseomonas marmotae strain 1318 plasmid p1318-5.
sequence version: NZ_CP061096.1
sequence date: 2023-02-11
sequence: sequence
division: CON
label: NZ_CP061096.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15936121
keyword: RefSeq
source: Roseomonas marmotae
organism: Roseomonas marmotae
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP061096.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT v. SMRT Link v5.1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/11/2023 00:10:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,598\nCDSs (total) :: 4,525\nGenes (coding) :: 4,419\nCDSs (with protein) :: 4,419\nGenes (RNA) :: 73\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 54\nncRNAs :: 4\nPseudo Genes (total) :: 106\nCDSs (without protein) :: 106\nPseudo Genes (ambiguous residues) :: 0 of 106\nPseudo Genes (frameshifted) :: 50 of 106\nPseudo Genes (incomplete) :: 72 of 106\nPseudo Genes (internal stop) :: 15 of 106\nPseudo Genes (multiple problems) :: 27 of 106\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 60587
topology: linear
so has quality: SO_0000987
location: 1..60587
location: region:1-60587:1
RO_0002162: 2768161

NZ_CP061096
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15936121
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Zhu, W.
journal: Submitted (02-SEP-2020) National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, No. 155 Changbai Road, Changping District, Beijing 102206, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60587:1
position: 60587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-60587:1:source
so part of: sequence
organism: Roseomonas marmotae
mol type: genomic DNA
strain: 1318
host: Marmota himalayana
type material: type strain of Roseomonas marmotae
plasmid: p1318-5
country: China: Qinghai province
collection date: 2018-08

2768161
type: Taxonomy
SIO_000068: taxonomy

IAI58_RS22010
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22010
old locus tag: IAI58_21995
so part of: sequence
location: 194..841
location: region:194-841:1
so has part: feature:194-841:1:exon
subclass of: SO_0000010

position:194:1
position: 194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841:1
position: 841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194-841:1:exon

IAI58_RS22010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22010
old locus tag: IAI58_21995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004213364.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MKTVAIISQKGGVGKTTLATALAVAAQRDGKTAAVFDVDPQASATFWRDMRQAEEPAVVSVQPVRLAHMLKAASEAGTDLVVIDTPPIAKDTAFLAAEHADFILIPTKPAVLDVMAATETLKLVKRATEPPRPSAVVMTFCPVQGREVPDTEQAIRQLGATLAPVRLGLRVAYSRAQQTGLAAIEFEPDGKAADEIKRLYEFVCMNLYVYEQEAV
SIO_010081: IAI58_RS22010
subclass of: SO_0000673
so part of: IAI58_RS22010
location: 194..841
location: region:194-841:1
so has part: feature:194-841:1:exon

WP_207450500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194-841:1:exon

IAI58_RS22015
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22015
old locus tag: IAI58_22000
so part of: sequence
location: 838..1161
location: region:838-1161:1
so has part: feature:838-1161:1:exon
subclass of: SO_0000010

position:838:1
position: 838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161:1
position: 1161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838-1161:1:exon

IAI58_RS22015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22015
old locus tag: IAI58_22000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018263993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNSLQAILDREAAAPPDDLPIEAPPPAANKHPTNAKPKPAHSPAEPAKFHRPSRDGRRFMGGHFSPEVLKQMKLLAVEEDTTTQALLEEALNLLFVKKGKGRIIGV
SIO_010081: IAI58_RS22015
subclass of: SO_0000673
so part of: IAI58_RS22015
location: 838..1161
location: region:838-1161:1
so has part: feature:838-1161:1:exon

WP_207450498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:838-1161:1:exon

IAI58_RS22020
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22020
old locus tag: IAI58_22005
so part of: sequence
location: complement(1279..2202)
location: region:1279-2202:-1
so has part: feature:1279-2202:-1:exon
subclass of: SO_0000010

position:1279:-1
position: 1279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202:-1
position: 2202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279-2202:-1:exon

IAI58_RS22020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22020
old locus tag: IAI58_22005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013635080.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MGRVHQAIEEAGKQGALLLDGFDRSEVEAAATYLADEDGGIGYLFSGWCQAALPHRRLPDHKGWQVSGERVTLIVEPGMRPGPSGEPIHVGVPFGSRARLILLYLQSEALKTGNREVELGAHLTQWMRRLGVPIGGRSADQVREQAERLAMCKLSFHVRAGSASGMLQQTIVDSAFFVDTDDDAEPDQGPLFAEKARLSEGFFQQLQKHPVPLEEAAIRALQNNSMALDLYAWAAYRLHSLKAPTPVSWRALKPQFGVAFGRMDNFRARFLDNLKLALAVYPEARVDITDTGLLLHPSRPPVAPRIK
SIO_010081: IAI58_RS22020
subclass of: SO_0000673
so part of: IAI58_RS22020
location: complement(1279..2202)
location: region:1279-2202:-1
so has part: feature:1279-2202:-1:exon

WP_208776327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1279-2202:-1:exon

IAI58_RS22025
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22025
old locus tag: IAI58_22010
so part of: sequence
location: 3070..3363
location: region:3070-3363:1
so has part: feature:3070-3363:1:exon
subclass of: SO_0000010

position:3070:1
position: 3070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3363:1
position: 3363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070-3363:1:exon

IAI58_RS22025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22025
old locus tag: IAI58_22010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGRGIFGSREVALPNEVAVYITEDDSGTLVGVVLPPGAKANPATPGDLPSSAGTVQRSAALAINDGIRKSQALMAPLVIIDPFGVWNADWGELRPH
SIO_010081: IAI58_RS22025
subclass of: SO_0000673
so part of: IAI58_RS22025
location: 3070..3363
location: region:3070-3363:1
so has part: feature:3070-3363:1:exon

WP_208776328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3070-3363:1:exon

IAI58_RS22030
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22030
old locus tag: IAI58_22015
so part of: sequence
location: complement(3678..4646)
location: region:3678-4646:-1
so has part: feature:3678-4646:-1:exon
subclass of: SO_0000010

position:3678:-1
position: 3678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4646:-1
position: 4646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3678-4646:-1:exon

IAI58_RS22030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22030
old locus tag: IAI58_22015
inference: COORDINATES: protein motif:HMM:NF012742.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MARAAGVSLMSVSNAFNRPAVVLPDTRARILAVAAELGYVPNRIAGTLASGRSQVVAAIVPSIRNSSFARTVQGLSDTLADRGYELLLAIADTPERELSSLQAVLGRRPDGIVLTGNTHLPQSVALLRQAGLPVVESWILSEPVIDMAVGFNLGAAAYAMGRHLIARGYRHIGYAGYAPADNSRFLERQLGFQRALIEAGLRDDLVFHAEEHNGFAGGRLALEALRMREPRLDAIFCSTDVFAAGLIFDCQRQSIRVPEDLAIAGYGDFEIAAEIVPRLSTVRTRGYEIGQAAARLILDRAEGREAPIRYDVGHELVLRESS
SIO_010081: IAI58_RS22030
subclass of: SO_0000673
so part of: IAI58_RS22030
location: complement(3678..4646)
location: region:3678-4646:-1
so has part: feature:3678-4646:-1:exon

WP_208776329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3678-4646:-1:exon

IAI58_RS22035
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22035
old locus tag: IAI58_22020
so part of: sequence
location: 4875..5552
location: region:4875-5552:1
so has part: feature:4875-5552:1:exon
subclass of: SO_0000010

position:4875:1
position: 4875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5552:1
position: 5552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4875-5552:1:exon

IAI58_RS22035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22035
old locus tag: IAI58_22020
inference: COORDINATES: protein motif:HMM:NF018024.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1028 domain-containing protein
translation: MTFSLAARDPATGMFGIATASSSIAVGNRCPWARAGIGAVTTQHRTDTRAGPLGLDLLARGYNAQEVVDLLVAGSEYPGQRQFAAIDREGRTAFFNGPEITSINAAANGSQCVSTGNFLANVGVVQAMVDGFEASADQAFVERLLRALEAGVAAGGETQPAMAASLLVVDRHAWPLVDLRVDFEPDPERALRRLWSHYEPLVERFVTQVLRPFELQPLINSALTV
SIO_010081: IAI58_RS22035
subclass of: SO_0000673
so part of: IAI58_RS22035
location: 4875..5552
location: region:4875-5552:1
so has part: feature:4875-5552:1:exon

WP_207451118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4875-5552:1:exon

IAI58_RS22040
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22040
old locus tag: IAI58_22025
so part of: sequence
location: 5563..6555
location: region:5563-6555:1
so has part: feature:5563-6555:1:exon
subclass of: SO_0000010

position:5563:1
position: 5563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6555:1
position: 6555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5563-6555:1:exon

IAI58_RS22040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22040
old locus tag: IAI58_22025
inference: COORDINATES: protein motif:HMM:NF015366.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate binding protein
translation: MTLPIHATRRTMLGGLLAPLATPAVLRAQTVFPNRPITLIVSFPAGGSSDVTARIVADGMSRTLGQSVVVENRPGGATVIGANAVLQSAKDGYTLLFASTSALTTNPHLFRNLPYKTADFAPVSMVAVAPWIIAGTPTIPVTTLQELVAYVKARPGQMNYHHYGPGTGAHLFAEMVLNATGMQAEAIVYKGEAPALTALSTGEIQFMPANISGALLEQHRAGRIRILAVADAVRSPAAPDVPTFAEAGYPQVVANSWFGIAAPAGTPAPVLARLQQGVEAAMALPDVRSRIETTGFIPQSSTTEAMAQTIREHSQLWGDVIQRLGIKLEL
SIO_010081: IAI58_RS22040
subclass of: SO_0000673
so part of: IAI58_RS22040
location: 5563..6555
location: region:5563-6555:1
so has part: feature:5563-6555:1:exon

WP_207451120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5563-6555:1:exon

IAI58_RS22045
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22045
old locus tag: IAI58_22030
so part of: sequence
location: complement(6848..7822)
location: region:6848-7822:-1
so has part: feature:6848-7822:-1:exon
subclass of: SO_0000010

position:6848:-1
position: 6848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7822:-1
position: 7822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6848-7822:-1:exon

IAI58_RS22045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22045
old locus tag: IAI58_22030
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MIRAPSLRSLDLFVILMRTRSISETARHIGITQPAASLALKELEAQIGLPLFVRTRQRLVPTPQATALLPQVDRLIGQADVVQQQIVALQEAAAPTLRLACIPSFGSTLLPPILARFRRSWTRVQLKIEVQPLGRVLDLLRQEAIDLAFCYLPGAESSPTDHRQERLLVTPLAGLMASDHPLAAKPILTLEDLSEHTAIIADRNNLPIPAAVSEAVLENGHAKGVLEVNNVYTAIGLARAGIGIALANPLLLSDGTVPGLTARPIKPEFPLALGALRGLPHANTPEVEALIAYAQDAARHASAQLSAQGLFSGAEFSASIMTAS
SIO_010081: IAI58_RS22045
subclass of: SO_0000673
so part of: IAI58_RS22045
location: complement(6848..7822)
location: region:6848-7822:-1
so has part: feature:6848-7822:-1:exon

WP_207451122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6848-7822:-1:exon

IAI58_RS22050
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22050
old locus tag: IAI58_22035
so part of: sequence
location: 8022..10127
location: region:8022-10127:1
so has part: feature:8022-10127:1:exon
subclass of: SO_0000010

position:8022:1
position: 8022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10127:1
position: 10127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8022-10127:1:exon

IAI58_RS22050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22050
old locus tag: IAI58_22035
inference: COORDINATES: protein motif:HMM:NF014071.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase/oxoprolinase family protein
translation: MSIDKTKTFRLGVDIGGTFTDIVLLSESGQIYTKKLLSSPPDYSESIENGVRELLRDVGVAPSQVTEFIHGTTVVTNTIIERKGEPIALVTTRGFRDVLELGRFRAPSLYDSSFRKLEPLAERRLRFEVTERVAADGSVLQPLVEDEIAGIAEQIEKEGITSVAICFINAYANGVNEKIAARLLRERLPDLSISTSSQLLPKIQEYERTSTTAMNAYVRPVAERYIDSLQRRLTDIGITCDLMIMQSAGGVVPGKVAAQNPVYIVESGPAAGVVGAQRLSGTLGVSNIMVVDVGGTTAKASLIEDGAFTVATESEVGGSAAMGHRLIQGAGYPVQAPTIDIAEVGAGGGSIAAVDQANGLRVGPRSAGAVPGPACYGRGGEAATVTDANLILGYISPSALVGGELSLDRRKAEQAVGSIAGRLDMEQVDAAYGVHLIANSNMMRALNGVSSERGRDPSQYALFAIGGNGSVHGTKLADDLRMNMVIVPPASGVFSALGLLFADVEHQVIRTFYRHLHEVDPAAMTKMLMEMEREARGQLADGGFDENHMDIRIIAEARYFGQQTTLPLTLESARVTREVLEGCSTQFTQAHELNYGYNSPHEKIQFVSLKVLGRGLCDQPRVPEQLTVQRGSKASETRRQVYFGPEHGWIDTPVISRGSLTLEPRQGPVIVEEYESTSVVRPGWSVEVDPFSNIVMRRIGA
SIO_010081: IAI58_RS22050
subclass of: SO_0000673
so part of: IAI58_RS22050
location: 8022..10127
location: region:8022-10127:1
so has part: feature:8022-10127:1:exon

WP_207451124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8022-10127:1:exon

IAI58_RS22055
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22055
old locus tag: IAI58_22040
so part of: sequence
location: 10124..11866
location: region:10124-11866:1
so has part: feature:10124-11866:1:exon
subclass of: SO_0000010

position:10124:1
position: 10124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11866:1
position: 11866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10124-11866:1:exon

IAI58_RS22055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22055
old locus tag: IAI58_22040
inference: COORDINATES: protein motif:HMM:NF014585.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase B/oxoprolinase family protein
translation: MNKINPLMKADPVKRELIKNALVTVADNMIALVIRTSRSVVVKNNLDFSASILNGHGEMVAQGLSLPGHLGATEPALRGCLEHFGDNIRPGDILCNNDPYSGASHLNDLFMFRPIFVGDELIAFLSIIIHHTDMGGRVPGGNAPDSTEIYQEGLRIPPLKIMEAGKPNETLLRIIRTNVRVSDMVVGDMLSQMSSLVAAETEFRRIISDYGADTVRFYMSELIDYAERLTRQGIAALPDGTGEFTDWIDEDGAGGPPVRIQVRLTVQGDSAEIDFTGTSPQTSGAINPNRYFAVGLSLAVLRTVLDPSIPANAGFNRAVKVITPEGCFVNPRFPAPVGARGLAGFRVRHAVSGALAMLLPDRVGACVGGSEFALVLAGYPKGKSPFLTLEFHNVTGIGGGPDRDGQDGGPYGLANIANVPVEVIEAEGPVRVECYAFLPDTGGAGRYRGALGLVREYRLLEEEALIQLRSDRQVNRPYGLFGGDPGAPGRIIMNPGTPEERVAPAKFIGKMRQGELLRAEMPGAGGYGNPMERDPHAVVNDVLQGKISVEKAREIYGVAVDLAGHADLDATRALREKRAS
SIO_010081: IAI58_RS22055
subclass of: SO_0000673
so part of: IAI58_RS22055
location: 10124..11866
location: region:10124-11866:1
so has part: feature:10124-11866:1:exon

WP_207451126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10124-11866:1:exon

IAI58_RS22060
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22060
old locus tag: IAI58_22045
so part of: sequence
location: 12005..12949
location: region:12005-12949:1
so has part: feature:12005-12949:1:exon
subclass of: SO_0000010

position:12005:1
position: 12005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12949:1
position: 12949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12005-12949:1:exon

IAI58_RS22060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22060
old locus tag: IAI58_22045
inference: COORDINATES: protein motif:HMM:NF015366.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate binding protein
translation: MAAAVPASAQAAFPNRPIRIIVPFAAGGNVDLQCRILAEKMGQLLKGTILVENRAGAGGAIGAEAVAHSAPDGYTLLGGSNGPMTVSPALRTDLGYDPLRDFAPLALTSRAPMALAVSKKLGVDTLQDFLALASSRPGHVTVASSGTGSSSHLVLIDFGLTTRTSYEHIPYRGASATVPDLISGNVDGVMTEVSNISPAHAAGQVKILGIAATNRSMLVPEVPTFAQAGVPGFIAFSFCGLFAPARTPEAVLQVLSRAAATALTDHEVRKKFEDIGLEIPEAQETAPASMSSVLKRELEIARRVGAAAGIKLQN
SIO_010081: IAI58_RS22060
subclass of: SO_0000673
so part of: IAI58_RS22060
location: 12005..12949
location: region:12005-12949:1
so has part: feature:12005-12949:1:exon

WP_207451128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12005-12949:1:exon

IAI58_RS22065
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22065
old locus tag: IAI58_22050
pseudo: true
so part of: sequence
location: 12961..13731
location: region:12961-13731:1
so has part: feature:12961-13731:1:exon
subclass of: SO_0000010

position:12961:1
position: 12961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13731:1
position: 13731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12961-13731:1:exon

IAI58_RS22065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22065
old locus tag: IAI58_22050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611992.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: IAI58_RS22065
subclass of: SO_0000673
so part of: IAI58_RS22065
location: 12961..13731
location: region:12961-13731:1
so has part: feature:12961-13731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12961-13731:1:exon

IAI58_RS22070
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22070
old locus tag: IAI58_22055
so part of: sequence
location: complement(13868..14116)
location: region:13868-14116:-1
so has part: feature:13868-14116:-1:exon
subclass of: SO_0000010

position:13868:-1
position: 13868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14116:-1
position: 14116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13868-14116:-1:exon

IAI58_RS22070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22070
old locus tag: IAI58_22055
inference: COORDINATES: protein motif:HMM:NF015366.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate-binding protein
translation: MPGLTAVAWLMAIYPRGVGQKTLAETHAAIRATMSGPEIEARLLTIGSVPRYSADPEEAAAFLRDEFAHWGAVVRRNNVAME
SIO_010081: IAI58_RS22070
subclass of: SO_0000673
so part of: IAI58_RS22070
location: complement(13868..14116)
location: region:13868-14116:-1
so has part: feature:13868-14116:-1:exon

WP_237182700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13868-14116:-1:exon

IAI58_RS22075
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22075
old locus tag: IAI58_22060
so part of: sequence
location: complement(14043..14447)
location: region:14043-14447:-1
so has part: feature:14043-14447:-1:exon
subclass of: SO_0000010

position:14043:-1
position: 14043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14447:-1
position: 14447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14043-14447:-1:exon

IAI58_RS22075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22075
old locus tag: IAI58_22060
inference: COORDINATES: protein motif:HMM:NF015366.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate-binding protein
translation: MIIHRRTLLAGLAAPAIAQAAYPDRPIRVLVPFPPGGVVDVTARVIFDQLGPELGNTPVVIENVPGAGGNVATLRAARATPDGYTLLFTTPSHGEAAGQLARPTDAGGTGHAGTDCRRLAHGDLSTRRWAEDPG
SIO_010081: IAI58_RS22075
subclass of: SO_0000673
so part of: IAI58_RS22075
location: complement(14043..14447)
location: region:14043-14447:-1
so has part: feature:14043-14447:-1:exon

WP_208776331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14043-14447:-1:exon

IAI58_RS22080
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22080
old locus tag: IAI58_22065
so part of: sequence
location: complement(14545..15456)
location: region:14545-15456:-1
so has part: feature:14545-15456:-1:exon
subclass of: SO_0000010

position:14545:-1
position: 14545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15456:-1
position: 15456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14545-15456:-1:exon

IAI58_RS22080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22080
old locus tag: IAI58_22065
inference: COORDINATES: protein motif:HMM:NF015366.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate-binding protein
translation: MAAPALAQRAPAGPIKIVVGFGAGGLADITIRIVAERLSQRLGQPVLIDNRPGAGGSVAARAAASAERDGQTLAVLTTGNAIYKWLFASLPYDPVADFTAISGLAAFDLLMLTGSQSPLRSYADVKARAQDSLSIATIGSGSTQNIAGEWLKLAAGMNATVIPYRSTPEVLTSLQRGDTDIGFESYAGARGALEGGQVRAIASTGERRSQLLPDLPTLREAGLPNYAIVGWNALFAPAGTPKAVVDMLNQHVTAILAAPDIRQRLLELGVEPMPNTPEQMAARLRQDIDAWGEVIRRTGIQPQ
SIO_010081: IAI58_RS22080
subclass of: SO_0000673
so part of: IAI58_RS22080
location: complement(14545..15456)
location: region:14545-15456:-1
so has part: feature:14545-15456:-1:exon

WP_207451132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14545-15456:-1:exon

IAI58_RS22085
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22085
old locus tag: IAI58_22070
so part of: sequence
location: 15866..16786
location: region:15866-16786:1
so has part: feature:15866-16786:1:exon
subclass of: SO_0000010

position:15866:1
position: 15866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16786:1
position: 16786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15866-16786:1:exon

IAI58_RS22085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22085
old locus tag: IAI58_22070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007005146.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MLTRAADPPDLTQLEAMAAQLAASGHYRVLRRIAPRPALTPPPGTPTRLGLLLDLETTGLDAAQDEIIEMAMLPFTYGLDGTVYAVGKPFSRLRQPTRPIPPAVTALTGLTDEQVAGQQIDPAEVAAFIAPAALIIAHNAGFDRRFAEAFCPAFVEKPWACSQRGIDWAAEGFEGSKLSYLAMRHGLFFEGHRARHDCEATLEILARPLPASGVPGLARLLEGARQPRWRIWATDAPFHQKDRLKARGYRWNAEEKGPAQPRAWFIEVAEAERAAECAFLCQEIYGREWEPVMQRITALERYSVRG
SIO_010081: IAI58_RS22085
subclass of: SO_0000673
so part of: IAI58_RS22085
location: 15866..16786
location: region:15866-16786:1
so has part: feature:15866-16786:1:exon

WP_208776332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15866-16786:1:exon

IAI58_RS22090
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22090
old locus tag: IAI58_22075
so part of: sequence
location: 16883..17101
location: region:16883-17101:1
so has part: feature:16883-17101:1:exon
subclass of: SO_0000010

position:16883:1
position: 16883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17101:1
position: 17101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16883-17101:1:exon

IAI58_RS22090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22090
old locus tag: IAI58_22075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008616462.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0097351 - toxin sequestering activity [Evidence IEA]
GO process: GO:0001558 - regulation of cell growth [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PrlF family antitoxin
translation: MITSRLTSKAQTTIPQPVRAALRLREGDEIAYTIEQGRVVLTRVQPERAADDPFRTFAEWESPADAKAYAGL
SIO_010081: IAI58_RS22090
subclass of: SO_0000673
so part of: IAI58_RS22090
location: 16883..17101
location: region:16883-17101:1
so has part: feature:16883-17101:1:exon

WP_207451571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16883-17101:1:exon

IAI58_RS22095
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22095
old locus tag: IAI58_22080
so part of: sequence
location: 17088..17438
location: region:17088-17438:1
so has part: feature:17088-17438:1:exon
subclass of: SO_0000010

position:17088:1
position: 17088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17438:1
position: 17438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17088-17438:1:exon

IAI58_RS22095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22095
old locus tag: IAI58_22080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014777350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MPGFEVWDLVKVPFPYTNRPVQQRRPALVIAAPEASGTPVLLWVLMVTSAENRGWPGDVTVSDLTEAGLPAPSVVRPAKIATIEAGDAERIGRLPEPDQRQVAQALRASLGGVLAQ
SIO_010081: IAI58_RS22095
subclass of: SO_0000673
so part of: IAI58_RS22095
location: 17088..17438
location: region:17088-17438:1
so has part: feature:17088-17438:1:exon

WP_208776333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17088-17438:1:exon

IAI58_RS22100
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22100
old locus tag: IAI58_22085
so part of: sequence
location: 18523..21222
location: region:18523-21222:1
so has part: feature:18523-21222:1:exon
subclass of: SO_0000010

position:18523:1
position: 18523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21222:1
position: 21222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18523-21222:1:exon

IAI58_RS22100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22100
old locus tag: IAI58_22085
inference: COORDINATES: protein motif:HMM:NF017116.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: virulence-associated E family protein
translation: MSDQRTYCFTLGKSATESAWPKSNHEEMTWEQLAEFLTTHEVGKKEGSCIVPAIFRGERRKKGETEQIDFMMLDSDTGVSLEELAAQIQARGLRAVISSSYSHKTEFSSVKESTWKKWAEENGGEDPKRYLREHGVVPAVADTGFLLHVEDGRQVIHHDQMPKFRVVLPLRKPWRAADYPSQEAANAAWKAGVELTSAALGFRHDASTTDTSRLFYAPRCPADGPAPQTAILDGEPLDLDALEEEEGISADDLVVKAVRKGEKVFYGDFDLTLWSKKYGARFEIVEALRHRGKASFIHAKNEGRQHLVCVDDGDHSSAKKDTATFVSNASEARGGVKGFTYHCLHAHCKDKDRLHWITRLVEEEWLLLEDLKDPDFLVEVDEDDDEAKRLETIGDSLDVDRLKAGFGKATSKGEVTTLATEVREKRFSALDQAELLTAYRDAVKRLSGTKPSIAEAKKALRPAAPKDSWLYLLKTDEDGRILSNLANSIVLLSHDPVWKGVLAFDTLGQRVVARRPIPEYGEGSLDDPYDHPVSWSDHLTTATRVYLQNSGITTSKDDAIAAIYSVARESQFNALVEHLSGLEWDGVGRLDTWLSVYCGAVDNEYTRGAGRMWLLAAVARAYTPGCKVDHMLVLEGPQGARKSTVGAIIGGRWFTDSLPPMGQDDVRLSMALRGKWIIEHSELSGIRKARIEEVKAFLTRQSEFFVPKFGREEVEEPRSCIFYGSSNPDGAGYLSDTTGNRRFWPVTVAARIDTEALTRDRDQLLAEAVFRQQVKREPWWPDAEWERNLARPEQELREAEADPWTETVAKWLDGESGGLIDEAGREINKPRIERVTSAEVIEKALGVQARDINRGMQMRISIIMKGLGWLQKKSGGGVRRWVRPDYDAVEFDEDDAAGL
SIO_010081: IAI58_RS22100
subclass of: SO_0000673
so part of: IAI58_RS22100
location: 18523..21222
location: region:18523-21222:1
so has part: feature:18523-21222:1:exon

WP_208776334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18523-21222:1:exon

IAI58_RS22105
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22105
old locus tag: IAI58_22090
so part of: sequence
location: 22431..22676
location: region:22431-22676:1
so has part: feature:22431-22676:1:exon
subclass of: SO_0000010

position:22431:1
position: 22431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22676:1
position: 22676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22431-22676:1:exon

IAI58_RS22105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22105
old locus tag: IAI58_22090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADDSHPPDPADPLLTDLTAATPDEITEALSYALRYDARGKPRPSGGQMVASLAAERLMEHLALAGFVLMRRRPTPPHSAG
SIO_010081: IAI58_RS22105
subclass of: SO_0000673
so part of: IAI58_RS22105
location: 22431..22676
location: region:22431-22676:1
so has part: feature:22431-22676:1:exon

WP_207451436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22431-22676:1:exon

IAI58_RS22110
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22110
old locus tag: IAI58_22095
so part of: sequence
location: 22681..24171
location: region:22681-24171:1
so has part: feature:22681-24171:1:exon
subclass of: SO_0000010

position:22681:1
position: 22681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24171:1
position: 24171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22681-24171:1:exon

IAI58_RS22110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22110
old locus tag: IAI58_22095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DNA polymerase Y family protein
translation: MPRRILALWLPHLPLDRLRRREPALRGVPLATWSTAGNRRLLTAAEGPGLFAGQALADAQAICPGLALRPADPEADAALLERLAVWSLRWTPLAAVDGPDGLLLDVTGGTTLFGGEAALLRQVRASLQRAGFAVRAALAGTAEAAAALARAADGAIVPPGQDLAAVSPLPLSVLRLSPDLLSGLSRLGLRSIADLLRQPRAPLARRFGRVLLDALDGVSGARRRPVQPLRPPAEFLAVRDCLEPILTRPAIEHVLEALLTELCRQLLQAGRGARRLTLCAWRVDGQLQEVAIGTGAASRDLLHLRRLFAEPLGTLEPDLGFERLTLAAPVTEPLEGLQAVLRGERVDADPDPDEADLAALIDRLAQRLAVHRLRPLESHWPEYAAVPADPFETVAVPLDWGAELRPVRLLATPIPLAVTAAVPDGPPAQLRYGGVAHRVLSVLGPERLEPEWWGEDAARPARDYYRVQTVEGPRLWICRLLEPGRPPRWFLHGELA
SIO_010081: IAI58_RS22110
subclass of: SO_0000673
so part of: IAI58_RS22110
location: 22681..24171
location: region:22681-24171:1
so has part: feature:22681-24171:1:exon

WP_207451434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22681-24171:1:exon

IAI58_RS22115
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22115
old locus tag: IAI58_22100
so part of: sequence
location: 24175..27462
location: region:24175-27462:1
so has part: feature:24175-27462:1:exon
subclass of: SO_0000010

position:24175:1
position: 24175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27462:1
position: 27462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24175-27462:1:exon

IAI58_RS22115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22115
old locus tag: IAI58_22100
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011643768.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: error-prone DNA polymerase
translation: MPPDYAELGARSNFSLLDGASHPAELVAQAKALGHAGIGLCDHNSLAGVVRGHVAARELGLPFVVGTRLVLADGTEYLAWPTDRASYGRLTTLLSRGRMRSPKGACDLTREELLAHASGWCLALMPPLRPDAAFAARLRQDAAALRPQLALPLFCGAWCRLDGQDQPRLDRLAAMAEAAGAALLASGDVRYHHRERRRLADVLTAIRLGRTVETLGRSAERNGERALRSPARMARLFARHPAAISNTLRVLQACSGFSLAELRHEYPDEILEPGRTPQQTLRDRVWAAAEARWPRGVPDDIQARLRHELRLIAQLHYAAYFLTVHEIVRFARSKGILCQGRGSAANSTCCYVLGITAVDPSKHDLLFERFVSANRNEPPDIDVDFEHERREEVIQHIYERYGRERAAIAGTVIRYRARSAVREVGKALGLSEDVTARLAKGSWGPGRDSSLSEVASSEGLDPMDRRLALALELAEDIQDFPRHLATHVGGFVMSRGPLIELAVVTNAAMEGRTVLEWDKDDIDALGLLKVDVLALGMLSCLRRGFSLLRQHHRIELDLAGVPKDCPKTYAMLRRADSLGVFQVESRAQMNMLPRLRPERFYDLVIQVAIIRPGPIQGDMVHPYLRRRWGEEEPVYPSPGKEHGHPDELKNVLQRTLGVPLFQEQAMRVAMVAAGFTPEEADKLRRAMATFKHTQGVGEYRERLITGMVRRGYHPELAERAFKQIEGFGSYGFPESHAASFAHLAYASSWLKCHHPTVFAAALLNSQPMGFYAPAQIVRDAKEHGVEIRPLDVNASLWDCALEPEPRSAEGYALRLGLRLASGLSAQDGQQIVKARSGGNGSPFASPEEVVRRANITRKAMEALAQADAFRSLGTGRRAALWAARGVENDVPPLLQLAVEQAAVGEPPLLREPAPDLPQESLGQAVVLDYTATGLTLGNHPLALLRPQLRALSCRDTRGIARLPPGSRVKLAGLVLMRQRPGTAKGVVFVTVEDEFGTANLVVWADVGARDRAALLGARLLLVEAKIERETEHAEVPITHLICRTLVDRTDLLNSLMHRETNLPWGDAALGRADEVRRPDPGSRRSVKMPGSRDFH
SIO_010081: IAI58_RS22115
subclass of: SO_0000673
so part of: IAI58_RS22115
location: 24175..27462
location: region:24175-27462:1
so has part: feature:24175-27462:1:exon

WP_208776335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24175-27462:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 2768161
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 28016..28044
rpt unit seq: cggttcatccccgcgcctgcggggaacac
so part of: sequence
location: 28016..30179
location: region:28016-30179:1
so has part: feature:28016-30179:1:region

position:28016:1
position: 28016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30179:1
position: 30179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28016-30179:1:region

IAI58_RS22120
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: cas2e
locus tag: IAI58_RS22120
old locus tag: IAI58_22105
so part of: sequence
location: complement(30247..30588)
location: region:30247-30588:-1
so has part: feature:30247-30588:-1:exon
subclass of: SO_0000010

position:30247:-1
position: 30247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30588:-1
position: 30588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30247-30588:-1:exon

IAI58_RS22120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: cas2e
locus tag: IAI58_RS22120
old locus tag: IAI58_22105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014104758.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated endoribonuclease Cas2e
translation: MLVIVVENAPPRLRGRLAVWLLEVRAGVYIGAYGRRAREMMWGEVCASIEEGNAVMAWPVPNDAGFAFETCGRNRRVPVELDGFRLVSFGPDVALPTMPGPMAGSGRRPGGGG
SIO_010081: IAI58_RS22120
subclass of: SO_0000673
so part of: IAI58_RS22120
location: complement(30247..30588)
location: region:30247-30588:-1
so has part: feature:30247-30588:-1:exon

WP_207450578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30247-30588:-1:exon

IAI58_RS22125
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: cas1e
locus tag: IAI58_RS22125
old locus tag: IAI58_22110
so part of: sequence
location: complement(30569..31531)
location: region:30569-31531:-1
so has part: feature:30569-31531:-1:exon
subclass of: SO_0000010

position:30569:-1
position: 30569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31531:-1
position: 31531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30569-31531:-1:exon

IAI58_RS22125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: cas1e
locus tag: IAI58_RS22125
old locus tag: IAI58_22110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015072153.1
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated endonuclease Cas1e
translation: MNDRPIPGLPPPKPLPIRERSSILFVEKGRLDVLDGAFVLVDEGGIRTHIPIGGLVCLMLEPGTRVSHTAVALAARVGTLLIWVGEAGVRLYAAGQPGGARADRLLLQARLALEDDARLRVVRKMYTLRFNEEAPARRSIDQLRGIEGARVRETYRLLAQRHGVSWDGRHYDPHAWSTADLVNRCLSAATAALYGITEAAILAAGYAPAIGFLHSGKPQSFVYDIADILKFDTVVPEAFRVAAAFEHGKPLGGRLVTEPIAEVRRRCRDAFRQADVLSRLIPLIEEVLAAGGLPLPEAPVEAMPVAFTDPDRQGDAGHRG
SIO_010081: IAI58_RS22125
subclass of: SO_0000673
so part of: IAI58_RS22125
location: complement(30569..31531)
location: region:30569-31531:-1
so has part: feature:30569-31531:-1:exon

WP_207450576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30569-31531:-1:exon

IAI58_RS22130
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: cas6e
locus tag: IAI58_RS22130
old locus tag: IAI58_22115
so part of: sequence
location: complement(31548..32237)
location: region:31548-32237:-1
so has part: feature:31548-32237:-1:exon
subclass of: SO_0000010

position:31548:-1
position: 31548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32237:-1
position: 32237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31548-32237:-1:exon

IAI58_RS22130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: cas6e
locus tag: IAI58_RS22130
old locus tag: IAI58_22115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014104760.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated protein Cas6/Cse3/CasE
translation: MTGLTLSRIRLKRDASVAALAPLLLPEAGGARMVAGHGLLWSLFADGPDRRRDFLWREDAPGQFMTLSARAPSNPHQLFQIESKDFAPALSPGDRLGFTLRANPVISRSAGPGQRGRRHDVVMDALHSVPRGERAEARPAAVSAAGRAWFDRQGATSGFAVEGEVNVDGYDRISLPREGGRDRAAIFGVLDLTGILVVRDVALFLPALAAGFGRARAFGYGLMLIRRAG
SIO_010081: IAI58_RS22130
subclass of: SO_0000673
so part of: IAI58_RS22130
location: complement(31548..32237)
location: region:31548-32237:-1
so has part: feature:31548-32237:-1:exon

WP_207450574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31548-32237:-1:exon

IAI58_RS22135
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: cas5e
locus tag: IAI58_RS22135
old locus tag: IAI58_22120
so part of: sequence
location: complement(32234..33040)
location: region:32234-33040:-1
so has part: feature:32234-33040:-1:exon
subclass of: SO_0000010

position:32234:-1
position: 32234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33040:-1
position: 33040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32234-33040:-1:exon

IAI58_RS22135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: cas5e
locus tag: IAI58_RS22135
old locus tag: IAI58_22120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015072151.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated protein Cas5/CasD
translation: MPRYLTFALVAPLASFGSLAVGERREGWDRPARSAVLGLIGACLGLEREDAPAQAALAVDYGLALLCHAPGRLLADFHTAQVPSARRNQRFATRAQELAAPDLNTILSRRDYRSGAWHLAALWACGQPRWSLEAIAEAMRNPVFVPYLGRKSCPLGLPLAPDCVEGTDAPAVLMARQEKGPEARLDEERVRQRRTPLRRYLADQPGPGLVAMDAPPAGLAPGAPGYIAPDDPRRRRVEQRRDQPRNRARWQFDLRQELLLAPQGGQDA
SIO_010081: IAI58_RS22135
subclass of: SO_0000673
so part of: IAI58_RS22135
location: complement(32234..33040)
location: region:32234-33040:-1
so has part: feature:32234-33040:-1:exon

WP_207450565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32234-33040:-1:exon

IAI58_RS22140
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: cas7e
locus tag: IAI58_RS22140
old locus tag: IAI58_22125
so part of: sequence
location: complement(33025..34098)
location: region:33025-34098:-1
so has part: feature:33025-34098:-1:exon
subclass of: SO_0000010

position:33025:-1
position: 33025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34098:-1
position: 34098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33025-34098:-1:exon

IAI58_RS22140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: cas7e
locus tag: IAI58_RS22140
old locus tag: IAI58_22125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019463216.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated protein Cas7/Cse4/CasC
translation: MNRFLQLHLLTFFPPANLNRDDTGRPKTAVVGGVTRLRLSSQALKRAWRSSEIFSNALAGHLGERTQRLGEVILGHLLTGGMAEDKALLVAREIASVFGKVKDAKDKAPTRIEQLAFVAPEEKAAALALADRALAGEKIDAKAAGLLRSADTAADIALFGRMLADDPGYNREAAAQVAHAITTHKVTVEDDYYTAVDDLKLPSEDAGAGFLGEAAFGSGVFYLYLCIDTALLVKNLGGDQELAETALAALVEAAATTAPRGKQNSFAAHGRAAYLLAERGDQQPRTLAGAFARPVEAADDPGRGLVDASIAALQAFRQDLDAAYGPGCAEECSLQVGGKGSLRDVLAFVRGTPCPAT
SIO_010081: IAI58_RS22140
subclass of: SO_0000673
so part of: IAI58_RS22140
location: complement(33025..34098)
location: region:33025-34098:-1
so has part: feature:33025-34098:-1:exon

WP_207450563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33025-34098:-1:exon

IAI58_RS22145
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: casB
locus tag: IAI58_RS22145
old locus tag: IAI58_22130
so part of: sequence
location: complement(34095..34646)
location: region:34095-34646:-1
so has part: feature:34095-34646:-1:exon
subclass of: SO_0000010

position:34095:-1
position: 34095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34646:-1
position: 34646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34095-34646:-1:exon

IAI58_RS22145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: casB
locus tag: IAI58_RS22145
old locus tag: IAI58_22130
inference: COORDINATES: protein motif:HMM:TIGR02548.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated protein Cse2/CasB
translation: MSRQQPHVAAAWWRDLQGIVPGKPERKPADRAALAQLRHCATITEAMQHRAAIELFRRCGATHAAQLPEIALTAATLAHVRTDAPDITIASGIGPEAPDKPETALLKPVRFRRLLEAESPDERLTAFRRLVALAGGRLNVTDLADALLHWTEGTKRRWIYDYWKAGRPLDTLQAAPKTEDSAA
SIO_010081: IAI58_RS22145
subclass of: SO_0000673
so part of: IAI58_RS22145
location: complement(34095..34646)
location: region:34095-34646:-1
so has part: feature:34095-34646:-1:exon

WP_207450554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34095-34646:-1:exon

IAI58_RS22150
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: casA
locus tag: IAI58_RS22150
old locus tag: IAI58_22135
so part of: sequence
location: complement(34643..36271)
location: region:34643-36271:-1
so has part: feature:34643-36271:-1:exon
subclass of: SO_0000010

position:34643:-1
position: 34643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36271:-1
position: 36271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34643-36271:-1:exon

IAI58_RS22150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: casA
locus tag: IAI58_RS22150
old locus tag: IAI58_22135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003620496.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated protein Cse1/CasA
translation: MRVEPAFNLLEQTWLPVLRRSGPATIRPAQITEALDTDPVLAIDWARADFRIATLEFLIGLLATACPPEDSDAWMAGWFHPPNPAALDAAFAPITHAFNLDGEGPRFLQDFEDLVSGAEPIERLLIEAPGGSTITKNTDLLVRRGRVASLGRAAAAMMLYTFQSWAPAGGAGNRTGLRGGGPLITLVLPSPDASLWHLLWANMPCHEKPDPQDFPRIFPWLAPTVTSEADRTVTPQQAHTLQLWWGMPRRIRLDFAPLAAPAPCDLTGVPDSVQVVSWRQRPRGANYAGWGDLHPLTPRYQVKPATEVLPVHPQPGGIGYRHWLGLVASSGDGLRRPAPSVAAWRDERVADVFGAQARRTPARLLAAGYDMDNMKARGFVETEMPLPGNGDLKTRQAMDALAKDLVLATEQVASLLRGAVRAALFSAGATVKLDAEVFSTLRERLWDQTEASFFASLEAAAAGVTTGRQDWMPLLRRIALALFDEAAPLHPHTAGSAAPRIGRARRNLLFALTGFGKDGAALFTLLQLPVAESKARKKEKAA
SIO_010081: IAI58_RS22150
subclass of: SO_0000673
so part of: IAI58_RS22150
location: complement(34643..36271)
location: region:34643-36271:-1
so has part: feature:34643-36271:-1:exon

WP_207450546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34643-36271:-1:exon

IAI58_RS22155
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
gene: cas3
locus tag: IAI58_RS22155
old locus tag: IAI58_22140
so part of: sequence
location: complement(36419..39094)
location: region:36419-39094:-1
so has part: feature:36419-39094:-1:exon
subclass of: SO_0000010

position:36419:-1
position: 36419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39094:-1
position: 39094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36419-39094:-1:exon

IAI58_RS22155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
gene: cas3
locus tag: IAI58_RS22155
old locus tag: IAI58_22140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553115.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated helicase Cas3'
translation: MVRQGSVSAAATFWGKAQPQDPTKPGMHPLPAHSLDVAAVALLLPRRVMAGLTTPTLGFFVALHDIGKFSRSFQAMAPEHWPNSVLGPLPASRPSGARHDALGLHLMRDSLEEDLADLLPAPLGWKHSDKAHIWRALAGHHGRPAAEGADPGPATLCRDCIGAARDFVADLRNIFHPAAWTRPALPDLVACSWRLAGLVTLADWIGSRQAWFPYVGAAALANPAGYFWDHALPRAAAALSAAGLSPAAPASFAGLQGLFPGVTLPSPLQRWAETVELPAGPVLAVIEDLTGSGKTEAALTLAHRLMAQGRAGGLYMALPTMATANAMFGRLAVSYRGLFAAEARPSLALAHGHAALDPRFAASLAPGPPPARTFGTEDQAEAQCAAWLADDRRRALLAQVGVGTLDQALLAALPVRHAPLRLQGLADKVLVVDEAHAFDPYMRTELAALLRFQAALGGSVVLLSATLPRVQRQALVNAFRAGLGAAPAALVETAYPLATLAAAAGTTETPCAVRDGLARSLAVTRLDDAAAALVRIVAAARAGAAVAWVRNTVDDAIAAARALREQGLEPLLFHARFAMADRLAIEAKVLRCFGRDSHRPMREAVLVATQVVEQSLDLDFDLLVSDLAPVDLLIQRAGRLWRHQRPEDERPLPSPEFLVVSPAPVEAPAADWIAGPQPGTAAVYRDPALLWRGARALFGRGMLTTPGDMRPLIEEAADANAPGALPPALAAAAGRAYGIALGHTEIARQNTLEVGKGYAAGQGAWDSDIRTPTRLEERPRVTLRLALLQDGMVVPYAQDADIARAWALSEVGVLRHRIGTCPPPAGLEAAVAAARSRWERWEREAEDLLLAVLTPAGDGFGVAVQPETGKAAMLHYDPQHGLQWAASAKAG
SIO_010081: IAI58_RS22155
subclass of: SO_0000673
so part of: IAI58_RS22155
location: complement(36419..39094)
location: region:36419-39094:-1
so has part: feature:36419-39094:-1:exon

WP_207450536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36419-39094:-1:exon

IAI58_RS22160
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22160
old locus tag: IAI58_22145
so part of: sequence
location: 39015..39278
location: region:39015-39278:1
so has part: feature:39015-39278:1:exon
subclass of: SO_0000010

position:39015:1
position: 39015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39278:1
position: 39278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39015-39278:1:exon

IAI58_RS22160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22160
old locus tag: IAI58_22145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPGFVGSCGCAFPQKVAAALTDPCLTMPPTLSWSISFCSILKHCFSQISDFYPRRILSAAFACSSRLTALAAAMKRCATSYTCRQSL
SIO_010081: IAI58_RS22160
subclass of: SO_0000673
so part of: IAI58_RS22160
location: 39015..39278
location: region:39015-39278:1
so has part: feature:39015-39278:1:exon

WP_207450584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39015-39278:1:exon

IAI58_RS22170
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22170
old locus tag: IAI58_22155
pseudo: true
so part of: sequence
location: complement(39519..>39833)
location: region:39519-39833:-1
so has part: feature:39519-39833:-1:exon
subclass of: SO_0000010

position:39519:-1
position: 39519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39833:-1
position: 39833
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39519-39833:-1:exon

IAI58_RS22170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22170
old locus tag: IAI58_22155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611329.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: IAI58_RS22170
subclass of: SO_0000673
so part of: IAI58_RS22170
location: complement(39519..>39833)
location: region:39519-39833:-1
so has part: feature:39519-39833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39519-39833:-1:exon

IAI58_RS22175
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22175
old locus tag: IAI58_22160
pseudo: true
so part of: sequence
location: complement(<39955..>40134)
location: region:39955-40134:-1
so has part: feature:39955-40134:-1:exon
subclass of: SO_0000010

position:39955:-1
position: 39955
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:40134:-1
position: 40134
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39955-40134:-1:exon

IAI58_RS22175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22175
old locus tag: IAI58_22160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611221.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: IAI58_RS22175
subclass of: SO_0000673
so part of: IAI58_RS22175
location: complement(<39955..>40134)
location: region:39955-40134:-1
so has part: feature:39955-40134:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39955-40134:-1:exon

IAI58_RS22180
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22180
old locus tag: IAI58_22165
so part of: sequence
location: complement(40192..41088)
location: region:40192-41088:-1
so has part: feature:40192-41088:-1:exon
subclass of: SO_0000010

position:40192:-1
position: 40192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41088:-1
position: 41088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40192-41088:-1:exon

IAI58_RS22180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22180
old locus tag: IAI58_22165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004885945.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MSVGIDLYGLRGFVAVAEFGSFHEAATAIALSQSALSRRVQKLEDALGVTLLERTTRRVVLTVAGREFLPRARRLIDELEEALTSVRELTERQGGRVTIACVPSVTYYFLPLVLRRFNAEFPQVRIRLIDEAASEVLQRVRDGRAELGVTFLGQSDEDIAFTPIRRDPFVLVCREDHPLARQESVRWVDLQPYPYITAGLSSGNRLLIESALGNAAWRPRPFFEMQHLPSTLGLVEAGLGITALPRLSLPLEPHAVLTCRPLMEPEIIRTMGVIRRRGSSLSRPARALHRLLAEGRWS
SIO_010081: IAI58_RS22180
subclass of: SO_0000673
so part of: IAI58_RS22180
location: complement(40192..41088)
location: region:40192-41088:-1
so has part: feature:40192-41088:-1:exon

WP_207450533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40192-41088:-1:exon

IAI58_RS22185
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22185
old locus tag: IAI58_22170
so part of: sequence
location: 41244..42461
location: region:41244-42461:1
so has part: feature:41244-42461:1:exon
subclass of: SO_0000010

position:41244:1
position: 41244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42461:1
position: 42461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41244-42461:1:exon

IAI58_RS22185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22185
old locus tag: IAI58_22170
inference: COORDINATES: protein motif:HMM:NF016210.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PrpF domain-containing protein
translation: MPPTRLPPAWADAPLPWPGARRRGDQVGIRCVFMRAGTSRGAFLRAEDLPTDPSLREKVILGIYGSPDLRQIDGLGGATSLTSKVAIIARPTRPDADVDYTFGQVLIDEARVDFRGNCGNMSSGIAPFAIDEGLVSATGPSTIVRVHMTNTGTLLVAEVRVRDGLSLVAGEAEIAGVPGNGAPILLDWGAVGGTLGKGLLPTGQVREVLDTAIGPVSASIVDAGNVACFIEPTAVGLTGQELPGVVMDRALLDRIEAVRGAAAQRLGFVGDQRAAATQSPNLPKLYMVAPPQDYQDASGRQVRGEAIDMIGRGMSIGYPHQAYAATISVCTVTAALIPGTIVHAVVRPAVGSERPLCIGHPAGVMVVQGRVGLRDGQPVLERAAVIRTARRIMEGTAYVALSRFA
SIO_010081: IAI58_RS22185
subclass of: SO_0000673
so part of: IAI58_RS22185
location: 41244..42461
location: region:41244-42461:1
so has part: feature:41244-42461:1:exon

WP_272874886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41244-42461:1:exon

IAI58_RS22190
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22190
old locus tag: IAI58_22175
so part of: sequence
location: 42488..43471
location: region:42488-43471:1
so has part: feature:42488-43471:1:exon
subclass of: SO_0000010

position:42488:1
position: 42488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43471:1
position: 43471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42488-43471:1:exon

IAI58_RS22190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22190
old locus tag: IAI58_22175
inference: COORDINATES: protein motif:HMM:NF015366.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate binding protein
translation: MISRRSLLGCAAAFASPGSVALAQAIEAAEAFPSRPLRLVIPLPPGGGADLLGRLMANSLGKVLGQAVVVDNRAGAGGTIGSRYVAQTRADGYTLLLGYTSSHGINPALLNVPYDAVADFTPVSLLATAPNVLVCNPQFSPNSVAEVVEQARKQPEGVRYASAGIGSSPHLSGVMFDQKAGTRMLHVPYRGNGPALLAVTSGEVELTFASLPSALSLRQNGEVKVLGVTSPERHALMADVPPVADTLPGFDTGQWYAIYAPPNLPQPLLGRLNRATNEALGDPAIAAQIQGEGFEVLGSTPEELRRYTQNEITKWRQLAAETGLRLD
SIO_010081: IAI58_RS22190
subclass of: SO_0000673
so part of: IAI58_RS22190
location: 42488..43471
location: region:42488-43471:1
so has part: feature:42488-43471:1:exon

WP_207450531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42488-43471:1:exon

IAI58_RS22195
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22195
old locus tag: IAI58_22180
so part of: sequence
location: 43520..44275
location: region:43520-44275:1
so has part: feature:43520-44275:1:exon
subclass of: SO_0000010

position:43520:1
position: 43520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44275:1
position: 44275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43520-44275:1:exon

IAI58_RS22195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22195
old locus tag: IAI58_22180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018646848.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MELGLKGRRAVVTGASQGIGRAVARALALEGAQVAGVARRVEAVAALAQKVRAEGGSAIIPIAADLMTPGAALEIAAAAEKALGGVDILINAAGGSRPLTFDAPREAWDEGMELNFHRLRELTHALVPGMRARGWGRIVNFTGTSEPKIINAAFAAKAAVHVWSKGLSRDIAADGVTINCLQPGRIRSEQMAKRYPTQEAEQAFADEEIPARRFGEAEEIADLAVFLASARAAYVTGTVIPVDGGMSRFAF
SIO_010081: IAI58_RS22195
subclass of: SO_0000673
so part of: IAI58_RS22195
location: 43520..44275
location: region:43520-44275:1
so has part: feature:43520-44275:1:exon

WP_207450529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43520-44275:1:exon

IAI58_RS22200
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22200
old locus tag: IAI58_22185
pseudo: true
so part of: sequence
location: 44496..45628
location: region:44496-45628:1
so has part: feature:44496-45628:1:exon
subclass of: SO_0000010

position:44496:1
position: 44496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45628:1
position: 45628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44496-45628:1:exon

IAI58_RS22200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22200
old locus tag: IAI58_22185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012469303.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: IAI58_RS22200
subclass of: SO_0000673
so part of: IAI58_RS22200
location: 44496..45628
location: region:44496-45628:1
so has part: feature:44496-45628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44496-45628:1:exon

IAI58_RS22205
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22205
old locus tag: IAI58_22190
so part of: sequence
location: 46282..47040
location: region:46282-47040:1
so has part: feature:46282-47040:1:exon
subclass of: SO_0000010

position:46282:1
position: 46282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47040:1
position: 47040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46282-47040:1:exon

IAI58_RS22205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22205
old locus tag: IAI58_22190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008120532.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-CoA hydratase-related protein
translation: MLENHVAVITINRPDRMNAMDTEHYKALSAAWIRVRDDRDIRAAVITGAGEKSFSAGADLKSHVQREIPASETWLTQKDQLLNRGLEVWKPVIAAVNGYCLGGGMTLLLGTDIRVCVPHATFSLAEVKRGLIPANGGTQRVAAQLPHAIAMELLLTGERIDAETALRWGLVNRIVEREDLMDTALGYARRIAANAPLAVQASKELAIRSRDVDINTGLRMEVMTTRLLRETQDAREGARAFAEKREPAFRGE
SIO_010081: IAI58_RS22205
subclass of: SO_0000673
so part of: IAI58_RS22205
location: 46282..47040
location: region:46282-47040:1
so has part: feature:46282-47040:1:exon

WP_207450527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46282-47040:1:exon

IAI58_RS22210
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22210
old locus tag: IAI58_22195
so part of: sequence
location: 47042..48259
location: region:47042-48259:1
so has part: feature:47042-48259:1:exon
subclass of: SO_0000010

position:47042:1
position: 47042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48259:1
position: 48259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47042-48259:1:exon

IAI58_RS22210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22210
old locus tag: IAI58_22195
EC number: 2.8.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013958651.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA transferase
translation: MTLQRRPLEGIVVLDLGQIYQGPYATFLMAMAGAKVIKVEPPTGEYLRARADVGGAAMPFSMLNSNKESVLVDLKVPAGRELFLEMVRRADVVVENFAPETMERLGLGWNVLHAANPRLIYAFGSGYGRSGPYASYPAMDLTIQAMAGIMSITGFPEREPVKSGPALCDFFGGIHLYAGVVTALYERATTGIGRSVDVSLQDAVYPSLASNLSLWYSSGGAAPPRTGNKHGGLAASPYNVYPTSDGNIAIICVGQRQWGWITEAMGRPDLKDDPRFHDLRARCQNMDELDAIIGEWTRGYDKETLFAHLLHHRVPAAPVRNLDEVVSDPNMHARGMLTWVDHPEYGRLVLPNSPIRYSGLEPLALRPSPRLDENGQQVLGDWLGLTEAEIAELRQQGAVGAAPTA
SIO_010081: IAI58_RS22210
subclass of: SO_0000673
so part of: IAI58_RS22210
location: 47042..48259
location: region:47042-48259:1
so has part: feature:47042-48259:1:exon

WP_207450525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47042-48259:1:exon

IAI58_RS22215
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22215
old locus tag: IAI58_22200
so part of: sequence
location: 48352..49323
location: region:48352-49323:1
so has part: feature:48352-49323:1:exon
subclass of: SO_0000010

position:48352:1
position: 48352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49323:1
position: 49323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48352-49323:1:exon

IAI58_RS22215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22215
old locus tag: IAI58_22200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007005235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate binding protein
translation: MDRRSLLAGMAAGLLSRPALAQANWPNRPVRIIVPYGPGSTPDTFMRLLQPRWQEKFGQPLVIENRAGAGGNIGAQAIATARPDGYTIGVVPVGVMTFNQFLYTSLPYNAARDLDPISVIYELPNIFVVRSDIPATTVAQFADWGKKRPQGVSCASNGPGNSSHLFCALLANRTNLRAIDVPFKGGASEALPAMLRGDVDFSIEVISSYLGAVREGQLRALAVTGAERWPTLPDVPTMAELGFAGFNPPLVWVALVAPRGTPPEVTAAIAAFQKEATADAGLQERFMLAGARIRSSTPQDLAARIQREQPGWRELIEISGAKL
SIO_010081: IAI58_RS22215
subclass of: SO_0000673
so part of: IAI58_RS22215
location: 48352..49323
location: region:48352-49323:1
so has part: feature:48352-49323:1:exon

WP_207450523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48352-49323:1:exon

IAI58_RS22220
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22220
old locus tag: IAI58_22205
so part of: sequence
location: 49346..50164
location: region:49346-50164:1
so has part: feature:49346-50164:1:exon
subclass of: SO_0000010

position:49346:1
position: 49346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50164:1
position: 50164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49346-50164:1:exon

IAI58_RS22220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22220
old locus tag: IAI58_22205
inference: COORDINATES: protein motif:HMM:NF018066.2
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetoacetate decarboxylase family protein
translation: MQRYTAGDRYRMPFGFGPSPGPRQSQDGRPFDWSSSRRLVTSISFLSDAEAIQALLPLGFLVHGEPVVTVELTRLTNLAWLAGRGYSMIGVKFPAYYRGRKEEVRGPFLAVLWENLADPIITGREELGFAKLYCEIPETRTLGNEQISTAGWCGHSFIELRISGLTEAPPPPAAVETPDGTLHYKYIPATDGSGRADAAQAVISPLKPGALKTEQRWTGQGEVRFLRSTWEQLPTFFHVVNALCDLPMLGARGASLTSASGGTDLSEQRPII
SIO_010081: IAI58_RS22220
subclass of: SO_0000673
so part of: IAI58_RS22220
location: 49346..50164
location: region:49346-50164:1
so has part: feature:49346-50164:1:exon

WP_207450521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49346-50164:1:exon

IAI58_RS22225
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22225
old locus tag: IAI58_22210
so part of: sequence
location: 50203..51171
location: region:50203-51171:1
so has part: feature:50203-51171:1:exon
subclass of: SO_0000010

position:50203:1
position: 50203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51171:1
position: 51171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50203-51171:1:exon

IAI58_RS22225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22225
old locus tag: IAI58_22210
inference: COORDINATES: protein motif:HMM:NF014212.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPYVETIHGRVDSNDLGLTLMHEHIFTQNKEMQENYPNPEWDEAQLIAVARDGLRRLRTLGIGTLVDLTCFGLGRDVPLLQRVCEGIDIHVVVATGFYFFNELPKYFHLHGPGMRVDIPDPIPAMMIRDIQNGIAETGVRAGIIKIGSDSPGMTPDVQRIFKAAVRAQQETGVTISTHSNAKMKGGLDQVALLKDSGADLSRVIIGHCGDTTDLDYLKALLDSGVQIGMDRFGLNSFLSTELRIDTIVKLCGLGYAGQMTLSQDAGFWSCTTEPSVRARVNPEWTHFLICEFVLPELSRRGVPQEHIDTMMLHNPSRLLGRS
SIO_010081: IAI58_RS22225
subclass of: SO_0000673
so part of: IAI58_RS22225
location: 50203..51171
location: region:50203-51171:1
so has part: feature:50203-51171:1:exon

WP_207450519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50203-51171:1:exon

IAI58_RS22230
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22230
old locus tag: IAI58_22215
so part of: sequence
location: 51212..52336
location: region:51212-52336:1
so has part: feature:51212-52336:1:exon
subclass of: SO_0000010

position:51212:1
position: 51212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52336:1
position: 52336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51212-52336:1:exon

IAI58_RS22230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22230
old locus tag: IAI58_22215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018907447.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiolase family protein
translation: MRGSCVIAGIGATAFGKLPGRSTLSLNVEACRRALEDARVPKDAVDAVFVKTPTSTRELLYGQKLAEALGLQPRMGFALDQGGAANLSLIAIATMAIEAGQCEVVLVCYADNPRSGSRAVYARPRGDDAVFGWFSTAAGYAMIQRRFMADHGVPEEAFGEVAVACRAHGAANPAAQLRKPLSLDEYMAAPPMIAPMRREDVCLVSDGGAAVLVMSAARARQLGVPAPVPILGFGFGQTSWEVPLRPDLSSTEAKRSAATAFAMAGITPKDVQVAQIYDCFTVTVLMTLEDYGLCEPGGSHAFVRDGRIRIGGSLPINTAGGLLSETGMPGLQLVQEAVRQVRGTAVLQVPAVRHALVTNQGGTMHSHGTLILGG
SIO_010081: IAI58_RS22230
subclass of: SO_0000673
so part of: IAI58_RS22230
location: 51212..52336
location: region:51212-52336:1
so has part: feature:51212-52336:1:exon

WP_207450517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51212-52336:1:exon

IAI58_RS22235
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22235
old locus tag: IAI58_22220
so part of: sequence
location: 52338..52730
location: region:52338-52730:1
so has part: feature:52338-52730:1:exon
subclass of: SO_0000010

position:52338:1
position: 52338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52730:1
position: 52730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52338-52730:1:exon

IAI58_RS22235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22235
old locus tag: IAI58_22220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008120529.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OB-fold domain-containing protein
translation: MDLPLPEVTELNRPYWDGLTRGVLHAQRCNSCGNAWLPARHECPRCLSADAVWEAVDGGGHVVSWVVYHVAYHDAFRDRLPYNVAVVELDEGVRLITNIVAPEAALSIGLRVHLRLEEDFGLCLPRFVPA
SIO_010081: IAI58_RS22235
subclass of: SO_0000673
so part of: IAI58_RS22235
location: 52338..52730
location: region:52338-52730:1
so has part: feature:52338-52730:1:exon

WP_207450515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52338-52730:1:exon

IAI58_RS22240
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22240
old locus tag: IAI58_22225
so part of: sequence
location: complement(52771..53589)
location: region:52771-53589:-1
so has part: feature:52771-53589:-1:exon
subclass of: SO_0000010

position:52771:-1
position: 52771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53589:-1
position: 53589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52771-53589:-1:exon

IAI58_RS22240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22240
old locus tag: IAI58_22225
inference: COORDINATES: protein motif:HMM:NF012610.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MNTEQTPGITLYTRVASLLRSRILSGEWAVGSILPPIPKLCELYGVGTITIRQALRILAAEGLIESKRGRGTTVTKGIVPVQHNRPLRQAINDPLELGPDQTIRILQVEQPVSLPQELMRPGLPQAEYVRVKKIHFYKKTPFALIDIYVIKEAFDRFPKGAEASSKIGLLLRNDGSINLVNVEQEVTIVPRMGELDQYLSANSSDFAVSNVVVKILKWWKDSTGQIAFAGIHHYRADMFVLEIKRDVQDFYVTTEPGLIPTPSQKPAKKASS
SIO_010081: IAI58_RS22240
subclass of: SO_0000673
so part of: IAI58_RS22240
location: complement(52771..53589)
location: region:52771-53589:-1
so has part: feature:52771-53589:-1:exon

WP_237182651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52771-53589:-1:exon

IAI58_RS23190
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS23190
pseudo: true
so part of: sequence
location: <53795..53946
location: region:53795-53946:1
so has part: feature:53795-53946:1:exon
subclass of: SO_0000010

position:53795:1
position: 53795
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:53946:1
position: 53946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53795-53946:1:exon

IAI58_RS23190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS23190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611227.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: IAI58_RS23190
subclass of: SO_0000673
so part of: IAI58_RS23190
location: <53795..53946
location: region:53795-53946:1
so has part: feature:53795-53946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53795-53946:1:exon

IAI58_RS22245
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22245
old locus tag: IAI58_22230
pseudo: true
so part of: sequence
location: complement(54112..>54564)
location: region:54112-54564:-1
so has part: feature:54112-54564:-1:exon
subclass of: SO_0000010

position:54112:-1
position: 54112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54564:-1
position: 54564
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54112-54564:-1:exon

IAI58_RS22245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22245
old locus tag: IAI58_22230
inference: COORDINATES: protein motif:HMM:NF033580.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: IAI58_RS22245
subclass of: SO_0000673
so part of: IAI58_RS22245
location: complement(54112..>54564)
location: region:54112-54564:-1
so has part: feature:54112-54564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54112-54564:-1:exon

IAI58_RS22250
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22250
old locus tag: IAI58_22235
pseudo: true
so part of: sequence
location: 54609..55630
location: region:54609-55630:1
so has part: feature:54609-55630:1:exon
subclass of: SO_0000010

position:54609:1
position: 54609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55630:1
position: 55630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54609-55630:1:exon

IAI58_RS22250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22250
old locus tag: IAI58_22235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009867760.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: IAI58_RS22250
subclass of: SO_0000673
so part of: IAI58_RS22250
location: 54609..55630
location: region:54609-55630:1
so has part: feature:54609-55630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54609-55630:1:exon

IAI58_RS22255
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22255
old locus tag: IAI58_22240
pseudo: true
so part of: sequence
location: complement(<55895..56212)
location: region:55895-56212:-1
so has part: feature:55895-56212:-1:exon
subclass of: SO_0000010

position:55895:-1
position: 55895
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:56212:-1
position: 56212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55895-56212:-1:exon

IAI58_RS22255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22255
old locus tag: IAI58_22240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012455587.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: IAI58_RS22255
subclass of: SO_0000673
so part of: IAI58_RS22255
location: complement(<55895..56212)
location: region:55895-56212:-1
so has part: feature:55895-56212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55895-56212:-1:exon

IAI58_RS22260
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22260
old locus tag: IAI58_22245
so part of: sequence
location: 56430..57020
location: region:56430-57020:1
so has part: feature:56430-57020:1:exon
subclass of: SO_0000010

position:56430:1
position: 56430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57020:1
position: 57020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56430-57020:1:exon

IAI58_RS22260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22260
old locus tag: IAI58_22245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKKFPHLDKVHNLFASASASGFIAVLTLKEGELTLEKGCMALLCILLRIKFWIDDSEYFSSIAEGKYPSNKGFLIGICVAMLSWIPWAGAAAFIQDPRATAFMMMIVFILSLIWVIVTWIDGRPYAEQVAWAFLSPIYAGCFFIIWKSQEIEMPLAVYNELIPFAAMAIILNVFLFDMIASKTIIKLARTDDRAD
SIO_010081: IAI58_RS22260
subclass of: SO_0000673
so part of: IAI58_RS22260
location: 56430..57020
location: region:56430-57020:1
so has part: feature:56430-57020:1:exon

WP_207450504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56430-57020:1:exon

IAI58_RS22265
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22265
old locus tag: IAI58_22250
so part of: sequence
location: complement(57416..57736)
location: region:57416-57736:-1
so has part: feature:57416-57736:-1:exon
subclass of: SO_0000010

position:57416:-1
position: 57416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57736:-1
position: 57736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57416-57736:-1:exon

IAI58_RS22265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22265
old locus tag: IAI58_22250
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MPIFGYKSHIGIDRRHGLIRRWAVTDAAQHDSRSFAGLLDPGNTASRVWADTAYRTKRNLEVLERRGLAERIQFRRPPRRQLSEQQAKANATRARIRSAIEHVFAA
SIO_010081: IAI58_RS22265
subclass of: SO_0000673
so part of: IAI58_RS22265
location: complement(57416..57736)
location: region:57416-57736:-1
so has part: feature:57416-57736:-1:exon

WP_208776336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57416-57736:-1:exon

IAI58_RS22270
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22270
old locus tag: IAI58_22255
so part of: sequence
location: 57796..59016
location: region:57796-59016:1
so has part: feature:57796-59016:1:exon
subclass of: SO_0000010

position:57796:1
position: 57796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59016:1
position: 59016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57796-59016:1:exon

IAI58_RS22270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22270
old locus tag: IAI58_22255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007680245.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MARRKEPRIPDAILDQLLAGADARTAFEQGGLLDELKKAFTERALNAEMDHHLAGEGGEGNSRNGYGRKSVVTDSGKLALEIPRDRQASFDPQLIAKYQRRFPGFDDKVISMYARGMSAREIVGHLRELYGIEVSPDLISAVTDAVLDEISAWQNRPLEPVYPVVFFDALRVKIRDEGLVRNKAVHIALGVRADGGKEILGLWLEQNEGAKFWLRVMNELRGRGVEDLLLAVVDGLKGFPEAILAVFPEAVVQTCIVHLLRQSLDFVAYKDRKPVAAALKAIYQAVDAAAAEAALTAFEAEFWGQKYPAIGQSWRRAWTEVVPFYAFSVEIRRFLYTTNAIEALNAKLRRAVRSRGHFPTDEAALKLLFLVLHRAEKEWTMPPREWSMAKAQFAVLFGERFTRAMA
SIO_010081: IAI58_RS22270
subclass of: SO_0000673
so part of: IAI58_RS22270
location: 57796..59016
location: region:57796-59016:1
so has part: feature:57796-59016:1:exon

WP_207451421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57796-59016:1:exon

IAI58_RS22275
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22275
old locus tag: IAI58_22260
so part of: sequence
location: complement(59249..59656)
location: region:59249-59656:-1
so has part: feature:59249-59656:-1:exon
subclass of: SO_0000010

position:59249:-1
position: 59249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59656:-1
position: 59656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59249-59656:-1:exon

IAI58_RS22275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22275
old locus tag: IAI58_22260
inference: COORDINATES: protein motif:HMM:NF017416.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MAAQPGFFDVDERYAALSAAGDPLERLSAVVDFEIFCPVLDAALKRSDCGRGGRPPNDAVLMFRILVLQELYSFSDEQAEFRLRDRLSFMRFAGLGAYREQLKQAATMGGCSAASMMCGRPRDFSPWVGRSSMPP
SIO_010081: IAI58_RS22275
subclass of: SO_0000673
so part of: IAI58_RS22275
location: complement(59249..59656)
location: region:59249-59656:-1
so has part: feature:59249-59656:-1:exon

WP_208776337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59249-59656:-1:exon

IAI58_RS22280
type: Gene
subclass of: SO_0000704
RO_0002162: 2768161
locus tag: IAI58_RS22280
old locus tag: IAI58_22265
so part of: sequence
location: complement(59858..60394)
location: region:59858-60394:-1
so has part: feature:59858-60394:-1:exon
subclass of: SO_0000010

position:59858:-1
position: 59858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60394:-1
position: 60394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59858-60394:-1:exon

IAI58_RS22280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2768161
locus tag: IAI58_RS22280
old locus tag: IAI58_22265
inference: COORDINATES: protein motif:HMM:NF014045.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MHLAYVDCSNLFIEAQKVSAVARGWARSLAEVNQQSRPDFSYRIDFHRLMALLRELEDPVQAVVFGSITDGNEGLWRHAEAAGFAVQVVERSISGKEKRVDTGLVTRICRDAYRMGQPGRDRITLVAGDGDYEPMVRQLVQDGFEVTLLYWAHASRELQAVASRFYPLDDDLEDLALR
SIO_010081: IAI58_RS22280
subclass of: SO_0000673
so part of: IAI58_RS22280
location: complement(59858..60394)
location: region:59858-60394:-1
so has part: feature:59858-60394:-1:exon

WP_207450502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59858-60394:-1:exon