Streptomyces xanthii strain CRXT-Y-14 plasmid unnamed2.
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.
Submitted (03-SEP-2020) School of Life Science, Hunan University of Science and Technology, Chengzheng Street, Xiangtan, Hunan 411201, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP061283.1.\nBacteria and source DNA available from Jian Gao.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2.3\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 120.0x\nSequencing Technology :: Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/07/2022 17:42:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 7,607\nCDSs (total) :: 7,515\nGenes (coding) :: 7,425\nCDSs (with protein) :: 7,425\nGenes (RNA) :: 92\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 68\nncRNAs :: 3\nPseudo Genes (total) :: 90\nCDSs (without protein) :: 90\nPseudo Genes (ambiguous residues) :: 0 of 90\nPseudo Genes (frameshifted) :: 24 of 90\nPseudo Genes (incomplete) :: 67 of 90\nPseudo Genes (internal stop) :: 7 of 90\nPseudo Genes (multiple problems) :: 7 of 90\n##Genome-Annotation-Data-END##
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_018522442.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018522444.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522445.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522447.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522448.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522449.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522450.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522454.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522455.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522457.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522458.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522459.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522460.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522461.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522462.1
COORDINATES: similar to AA sequence:RefSeq:WP_018523495.1
COORDINATES: protein motif:HMM:NF022388.2
COORDINATES: similar to AA sequence:RefSeq:WP_018523494.1
COORDINATES: similar to AA sequence:RefSeq:WP_018523493.1
COORDINATES: similar to AA sequence:RefSeq:WP_018523492.1
COORDINATES: similar to AA sequence:RefSeq:WP_017596430.1
COORDINATES: similar to AA sequence:RefSeq:WP_018523490.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018522318.1
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: similar to AA sequence:RefSeq:WP_017575777.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522339.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522332.1
COORDINATES: similar to AA sequence:RefSeq:WP_006374768.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522340.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522341.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522342.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522322.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522323.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522324.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522333.1
COORDINATES: similar to AA sequence:RefSeq:WP_018521717.1
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018521720.1
COORDINATES: similar to AA sequence:RefSeq:WP_018895063.1
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF012296.2
COORDINATES: protein motif:HMM:NF037360.2
COORDINATES: protein motif:HMM:NF016974.2
aspartyl/asparaginyl beta-hydroxylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018587325.1
COORDINATES: protein motif:HMM:NF014805.2
COORDINATES: similar to AA sequence:RefSeq:WP_012892216.1
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018521729.1
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: similar to AA sequence:RefSeq:WP_003958426.1
COORDINATES: similar to AA sequence:RefSeq:WP_018521739.1
COORDINATES: similar to AA sequence:RefSeq:WP_018521740.1
COORDINATES: similar to AA sequence:RefSeq:WP_019521052.1
COORDINATES: similar to AA sequence:RefSeq:WP_018521745.1
DUF6415 family natural product biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_018521746.1
COORDINATES: protein motif:HMM:NF040183.1
COORDINATES: similar to AA sequence:RefSeq:WP_003956755.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018522391.1
COORDINATES: similar to AA sequence:RefSeq:WP_003954267.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522389.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522387.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019521055.1
COORDINATES: similar to AA sequence:RefSeq:WP_018100946.1
COORDINATES: similar to AA sequence:RefSeq:WP_018100948.1
COORDINATES: similar to AA sequence:RefSeq:WP_018100949.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522381.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522380.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018522379.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522377.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522937.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522938.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522939.1
COORDINATES: similar to AA sequence:RefSeq:WP_019607772.1
DNA phosphorothioation system sulfurtransferase DndC
COORDINATES: similar to AA sequence:RefSeq:WP_018522942.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522943.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522945.1
COORDINATES: similar to AA sequence:RefSeq:WP_007447336.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522947.1
COORDINATES: similar to AA sequence:RefSeq:WP_018524328.1
COORDINATES: similar to AA sequence:RefSeq:WP_018524327.1
COORDINATES: similar to AA sequence:RefSeq:WP_018524330.1
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018524331.1
COORDINATES: similar to AA sequence:RefSeq:WP_018524336.1
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018524662.1
COORDINATES: similar to AA sequence:RefSeq:WP_018524663.1