Choloepus didactylus mitochondrion, complete genome.
type: Entry
definition: Choloepus didactylus mitochondrion, complete genome.
sequence version: NC_006924.1
sequence date: 2023-04-03
sequence: sequence
division: MAM
label: NC_006924.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Choloepus didactylus (southern two-toed sloth)
organism: Choloepus didactylus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Pilosa; Folivora; Megalonychidae; Choloepus.
reference: 1
reference: 2
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from AY960980.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16543
topology: circular
so has quality: SO_0000988
location: 1..16543
location: region:1-16543:1
RO_0002162: 27675

NC_006924
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Direct Submission
journal: Submitted (04-APR-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

2
title: Direct Submission
author: McLenachan, P.
author: Penny, D.
journal: Submitted (14-MAR-2005) Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16543:1
position: 16543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16543:1:source
so part of: sequence
organism: Choloepus didactylus
organelle: mitochondrion
mol type: genomic DNA

27675
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Phe
so part of: sequence
location: 1..70
location: region:1-70:1
so has part: feature:1-70:1:region

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-70:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 27675
product: s-rRNA
so part of: sequence
location: 71..1034
location: region:71-1034:1
so has part: feature:71-1034:1:region

position:71:1
position: 71
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034:1
position: 1034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71-1034:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Val
so part of: sequence
location: 1034..1101
location: region:1034-1101:1
so has part: feature:1034-1101:1:region

position:1101:1
position: 1101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034-1101:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 27675
product: l-rRNA
so part of: sequence
location: 1102..2684
location: region:1102-2684:1
so has part: feature:1102-2684:1:region

position:1102:1
position: 1102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2684:1
position: 2684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102-2684:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2685..2760
location: region:2685-2760:1
so has part: feature:2685-2760:1:region

position:2685:1
position: 2685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760:1
position: 2760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2685-2760:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: ND1
so part of: sequence
location: 2764..3720
location: region:2764-3720:1
so has part: feature:2764-3720:1:exon
subclass of: SO_0000010

3338930
type: Gene
SIO_000068: ncbigene

position:2764:1
position: 2764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3720:1
position: 3720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2764-3720:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MLTTNILCLIIPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPAADATKLFTKEPLHPLTSSKFMFTIAPTLALTLALTLWIPLPMPYPLIDLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLTNGSFTLSTLTTTQEHMWLVLPTWPLTMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYANIILMNSLTTALFFGAFHNPSLPELHTINFITKTLILTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTSISFASIPPQT
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2764..3720
location: region:2764-3720:1
so has part: feature:2764-3720:1:exon

YP_220680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2764-3720:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Ile
so part of: sequence
location: 3720..3788
location: region:3720-3788:1
so has part: feature:3720-3788:1:region

position:3788:1
position: 3788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3720-3788:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Gln
so part of: sequence
location: complement(3786..3858)
location: region:3786-3858:-1
so has part: feature:3786-3858:-1:region

position:3786:-1
position: 3786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3858:-1
position: 3858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3786-3858:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Met
so part of: sequence
location: 3861..3929
location: region:3861-3929:1
so has part: feature:3861-3929:1:region

position:3861:1
position: 3861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3929:1
position: 3929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3861-3929:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: ND2
so part of: sequence
location: 3930..4973
location: region:3930-4973:1
so has part: feature:3930-4973:1:exon
subclass of: SO_0000010

3338940
type: Gene
SIO_000068: ncbigene

position:3930:1
position: 3930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4973:1
position: 4973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3930-4973:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: ND2
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPLTLNIITLTLLSGTMITMFSSHWLPAWIGLEMNMFAMIPILMLKHNPRSTEAATKYFLVQTTASALLMMAVMINFMYSGQWTIMKISNPLATHIITISITMKMGLAPFHFWVPEVTQGTPLLPGMILLTWQKLAPITIMSQITTSINPTLLLMMAVLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAIITYNPTLMTLNLTIYLLTTTSMFLLLMPQSSTTTLALTHTWNTTPLLTTLMTTVLLSMGGLPPLSGFLPKWMIIQEMTKNNLIVMPTMMAILALLNLYFYMRLIYSTSLTLFPTTNNTKIKWQFKPTTPPPLTPTLIILSTTIIPLSPMLCILE
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 3930..4973
location: region:3930-4973:1
so has part: feature:3930-4973:1:exon

YP_220681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3930-4973:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Trp
so part of: sequence
location: 4972..5039
location: region:4972-5039:1
so has part: feature:4972-5039:1:region

position:4972:1
position: 4972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5039:1
position: 5039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4972-5039:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Ala
so part of: sequence
location: complement(5042..5110)
location: region:5042-5110:-1
so has part: feature:5042-5110:-1:region

position:5042:-1
position: 5042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5110:-1
position: 5110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5042-5110:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Asn
so part of: sequence
location: complement(5112..5184)
location: region:5112-5184:-1
so has part: feature:5112-5184:-1:region

position:5112:-1
position: 5112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5184:-1
position: 5184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5112-5184:-1:region

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 27675
note: origin of L-strand replication
so part of: sequence
location: 5185..5218
location: region:5185-5218:1
so has part: feature:5185-5218:1:region

position:5185:1
position: 5185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5218:1
position: 5218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5185-5218:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Cys
so part of: sequence
location: complement(5216..5283)
location: region:5216-5283:-1
so has part: feature:5216-5283:-1:region

position:5216:-1
position: 5216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5283:-1
position: 5283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5216-5283:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Tyr
so part of: sequence
location: complement(5285..5351)
location: region:5285-5351:-1
so has part: feature:5285-5351:-1:region

position:5285:-1
position: 5285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5351:-1
position: 5351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5285-5351:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: COX1
so part of: sequence
location: 5353..6894
location: region:5353-6894:1
so has part: feature:5353-6894:1:exon
subclass of: SO_0000010

3338932
type: Gene
SIO_000068: ncbigene

position:5353:1
position: 5353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6894:1
position: 6894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5353-6894:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MLVTRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLTSSMVEAGAGTGWTVYPPLAGNLAHAGPSVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNMKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYMLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFMIWEAFASKREVLFVEFTTTNIEWLHGCPPPYHTFEEPAFVKI
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5353..6894
location: region:5353-6894:1
so has part: feature:5353-6894:1:exon

YP_220682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5353-6894:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(6897..6965)
location: region:6897-6965:-1
so has part: feature:6897-6965:-1:region

position:6897:-1
position: 6897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6965:-1
position: 6965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6897-6965:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Asp
so part of: sequence
location: 6973..7041
location: region:6973-7041:1
so has part: feature:6973-7041:1:region

position:6973:1
position: 6973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7041:1
position: 7041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6973-7041:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: COX2
so part of: sequence
location: 7042..7725
location: region:7042-7725:1
so has part: feature:7042-7725:1:exon
subclass of: SO_0000010

3338936
type: Gene
SIO_000068: ncbigene

position:7042:1
position: 7042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7725:1
position: 7725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7042-7725:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: COX2
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPMQLGFQDATSPIMEELLHFHDHTLMIMFLISTLVLYTISLMLSTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEMNNPLLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVILPMEMSIRMLISSEDVLHSWTIPSLGLKTDAIPGRLNQATLTSSRPGLYYGQCSEICGSNHSFMPIVLELTPLKHFENWSSSTL
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7042..7725
location: region:7042-7725:1
so has part: feature:7042-7725:1:exon

YP_220683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7042-7725:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Lys
so part of: sequence
location: 7728..7798
location: region:7728-7798:1
so has part: feature:7728-7798:1:region

position:7728:1
position: 7728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7798:1
position: 7798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7728-7798:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: ATP8
so part of: sequence
location: 7798..7989
location: region:7798-7989:1
so has part: feature:7798-7989:1:exon
subclass of: SO_0000010

3338941
type: Gene
SIO_000068: ncbigene

position:7989:1
position: 7989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7798-7989:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDTSTWSITILSTFISLFTLMQLKLTKHNFITPPTPKTPNTTKHTTPWEMKWTKTYSPLS
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7798..7989
location: region:7798-7989:1
so has part: feature:7798-7989:1:exon

YP_220684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7798-7989:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: ATP6
so part of: sequence
location: 7959..8639
location: region:7959-8639:1
so has part: feature:7959-8639:1:exon
subclass of: SO_0000010

3338937
type: Gene
SIO_000068: ncbigene

position:7959:1
position: 7959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8639:1
position: 8639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7959-8639:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNENLFASFVVPTMMGLPIVILIVMFPTLLFPSPGRLITNRLISIQQQMTNLILKQMMIIHSPKGRTWSLMLISLITFIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPIPLIPMLVIIETMSLFIQPTALAVRLTANITAGHLIMHLIGNATLALMSISPTTAFITFIILIALTALEFAVALIQAYVFTLLVSLYLHDNT
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 7959..8639
location: region:7959-8639:1
so has part: feature:7959-8639:1:exon

YP_220685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7959-8639:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: COX3
so part of: sequence
location: 8639..9422
location: region:8639-9422:1
so has part: feature:8639-9422:1:exon
subclass of: SO_0000010

3338935
type: Gene
SIO_000068: ncbigene

position:9422:1
position: 9422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8639-9422:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9422,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQMHAYHMINPSPWPLTGALSALLLTSGLVMWFHFNSTTLLIIGLTTSLLTMYQWWRDVVRESTFQGHHTVVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGISPLDPLEVPLLNTSILLASGVSITWAHHSLMEGNRKHMLQALFITIALGVYFTLLQASEYFNAPFTISDGIYGSTFFMATGFHGLHVIIGSSFLIICFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLLLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8639..9422
location: region:8639-9422:1
so has part: feature:8639-9422:1:exon

YP_220686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8639-9422:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Gly
so part of: sequence
location: 9423..9492
location: region:9423-9492:1
so has part: feature:9423-9492:1:region

position:9423:1
position: 9423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9492:1
position: 9492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9423-9492:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: ND3
so part of: sequence
location: 9493..9838
location: region:9493-9838:1
so has part: feature:9493-9838:1:exon
subclass of: SO_0000010

3338933
type: Gene
SIO_000068: ncbigene

position:9493:1
position: 9493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9838:1
position: 9838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9493-9838:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9838,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLILTLLINSALALLLMITAFWLPQLNSYTEKLSPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNPMLITALTLISLLALGLAYEWSQKGLEWTE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9493..9838
location: region:9493-9838:1
so has part: feature:9493-9838:1:exon

YP_220687.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9493-9838:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Arg
so part of: sequence
location: 9840..9908
location: region:9840-9908:1
so has part: feature:9840-9908:1:region

position:9840:1
position: 9840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9908:1
position: 9908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9840-9908:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: ND4L
so part of: sequence
location: 9909..10205
location: region:9909-10205:1
so has part: feature:9909-10205:1:exon
subclass of: SO_0000010

3338929
type: Gene
SIO_000068: ncbigene

position:9909:1
position: 9909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10205:1
position: 10205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9909-10205:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MPSTYINILLAFTMALLGLLLYRSHMMSSLLCLEGLMLALFILSTLMALNTHHTLSAVLPIVLMVFAACEAALGLALLVMVSNTYGLDYVQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 9909..10205
location: region:9909-10205:1
so has part: feature:9909-10205:1:exon

YP_220688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9909-10205:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: ND4
so part of: sequence
location: 10199..11576
location: region:10199-11576:1
so has part: feature:10199-11576:1:exon
subclass of: SO_0000010

3338938
type: Gene
SIO_000068: ncbigene

position:10199:1
position: 10199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11576:1
position: 11576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10199-11576:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11576,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKLIIPTIMLIPLTWLSKNNMIWINSTSHSLLISLTSLSMLYQTTNNSLNFSPLFFTDPLSTPLLILTTWLLPLMIMASQSHLHKDTTTRKKTYISMLISLQMLLITTFTATELMMFYILFEATLIPTLIIITRWGNQAERLNAGLYFLFYTLIGSLPLLVVLTYIQNSIGSLNILITQYYSQPLPTTWSSNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTLLDPLTNSMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGASTLMIAHGLTSSLLFCLANTNYERTHSRTMMLTRGLQTLLPLMALWWLLANLSNLALPPTINLIGELFVIMPTISWSNITIALLGLNMTITSMYSLSMFIITQRGNPTNHMHTIKPSFTRENTLMLMHLLPLALLSINPKLILGLPY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10199..11576
location: region:10199-11576:1
so has part: feature:10199-11576:1:exon

YP_220689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10199-11576:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-His
so part of: sequence
location: 11577..11645
location: region:11577-11645:1
so has part: feature:11577-11645:1:region

position:11577:1
position: 11577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11645:1
position: 11645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11577-11645:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11646..11705
location: region:11646-11705:1
so has part: feature:11646-11705:1:region

position:11646:1
position: 11646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11705:1
position: 11705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11646-11705:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11705..11774
location: region:11705-11774:1
so has part: feature:11705-11774:1:region

position:11774:1
position: 11774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11705-11774:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: ND5
so part of: sequence
location: 11775..13598
location: region:11775-13598:1
so has part: feature:11775-13598:1:exon
subclass of: SO_0000010

3338939
type: Gene
SIO_000068: ncbigene

position:11775:1
position: 11775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13598:1
position: 13598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11775-13598:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MNLLPTLTLTTFLILIAPVMMYTSKTHHTNQYPNYVKTSIMYSMLTHLAPATMLIWSGQETIISNWHWMTIQTMKLTLSFKLDYFSLTFIPVALFVTWSIAEFSTWYMLSDLNINRFLKYLLLFLITMITLVTANNLLQLFIGWEGVGIMSFLLIGWWYGRADTNTAALQAVLYNRIGDIGFVLAMAWFLTHSNSWELQQIFMLNLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPMLQNNSPILTLTMCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKTLPLTTSSLIIGSLALTGMPFLAGFYSKDLIIESANTSNTNAWALLITLIATSLTAMYSTRIIFFTLLNQPRFQTLTSINENNPSLLKPIKRLMLGSIFAGFLISNNMTPMTTPQMTMPTHLKLSALTITISGFLVAMELNQLTRNLQLKAPSHPYTFSNLLGFFPTIMHRTPPHLTLSISQNLALTLLDLTWLEKTAPKGLSRLNLLASNNISNQKGLIKLYFISFLISLLLMLLPLTYHLA
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11775..13598
location: region:11775-13598:1
so has part: feature:11775-13598:1:exon

YP_220690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11775-13598:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: ND6
so part of: sequence
location: complement(13582..14109)
location: region:13582-14109:-1
so has part: feature:13582-14109:-1:exon
subclass of: SO_0000010

3338934
type: Gene
SIO_000068: ncbigene

position:13582:-1
position: 13582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14109:-1
position: 14109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13582-14109:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MMYIVFLLSVIFVASFVGFSCKPSPIYGGLGLIVGGGVGCGMVMSLGGSFLGLMVFLVYLGGMLVVFGYTTAMATEEYPEAWGSNVVVLGGLLMGLLVEGLVVILFLSGDGVGFVSCGFKCMEDWVIFSGGGEGFVREDCVGVSALYNYGVWFMAMAGWALLVSVLVVVEVTRGG
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13582..14109)
location: region:13582-14109:-1
so has part: feature:13582-14109:-1:exon

YP_220691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13582-14109:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Glu
so part of: sequence
location: complement(14110..14178)
location: region:14110-14178:-1
so has part: feature:14110-14178:-1:region

position:14110:-1
position: 14110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14178:-1
position: 14178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14110-14178:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 27675
gene: CYTB
so part of: sequence
location: 14181..15320
location: region:14181-15320:1
so has part: feature:14181-15320:1:exon
subclass of: SO_0000010

3338931
type: Gene
SIO_000068: ncbigene

position:14181:1
position: 14181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15320:1
position: 15320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14181-15320:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 27675
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MTNIRKTHPLFKIINHTFIDLPTPSNISTWWNFGSLLGMCLIMQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHTNGASMFFICLYLHIGRSMYYGSYTYLKTWNIGIMLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFTLHFILPFIITALTMTHLLFLHETGSNNPLGISPDSDKIPFHPYYTMKDILGLLPMIFIMMALALFYPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALVLSILILAILPMLHTAKQRSLMFRPISQCLFWMLMTNLLVLTWIGGQPVEHPFTIIGQLASISYFSIILILMPMAGLIENNLMKW
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14181..15320
location: region:14181-15320:1
so has part: feature:14181-15320:1:exon

YP_220692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14181-15320:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Thr
so part of: sequence
location: 15321..15388
location: region:15321-15388:1
so has part: feature:15321-15388:1:region

position:15321:1
position: 15321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15388:1
position: 15388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15321-15388:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 27675
product: tRNA-Pro
so part of: sequence
location: complement(15391..15460)
location: region:15391-15460:-1
so has part: feature:15391-15460:-1:region

position:15391:-1
position: 15391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15460:-1
position: 15460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15391-15460:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 27675
note: control region
so part of: sequence
location: 15461..16543
location: region:15461-16543:1
so has part: feature:15461-16543:1:region

position:15461:1
position: 15461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15461-16543:1:region