Borrelia maritima strain CA690 plasmid lp36, complete sequence.
type: Entry
definition: Borrelia maritima strain CA690 plasmid lp36, complete sequence.
sequence version: NZ_CP044541.1
sequence date: 2022-11-27
sequence: sequence
division: CON
label: NZ_CP044541.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN08925038
keyword: RefSeq
source: Borrelia maritima
organism: Borrelia maritima
taxonomy: Bacteria; Spirochaetes; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
references: 31793856
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP044541.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 25-MAY-2018\nAssembly Method :: SPAdes v. 3.9\nAssembly Name :: CA690\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/27/2022 03:40:41\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,083\nCDSs (total) :: 1,043\nGenes (coding) :: 997\nCDSs (with protein) :: 997\nGenes (RNA) :: 40\nrRNAs :: 2, 1, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 2 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 46\nCDSs (without protein) :: 46\nPseudo Genes (ambiguous residues) :: 0 of 46\nPseudo Genes (frameshifted) :: 32 of 46\nPseudo Genes (incomplete) :: 13 of 46\nPseudo Genes (internal stop) :: 27 of 46\nPseudo Genes (multiple problems) :: 21 of 46\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 17364
topology: linear
so has quality: SO_0000987
location: 1..17364
location: region:1-17364:1
RO_0002162: 2761123

NZ_CP044541
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN08925038
type: BioSample
SIO_000068: biosample

1
title: Borrelia maritima sp. nov., a novel species of the Borrelia burgdorferi sensu lato complex, occupying a basal position to North American species
author: Margos, G.
author: Fedorova, N.
author: Becker, N.S.
author: Kleinjan, J.E.
author: Marosevic, D.
author: Krebs, S.
author: Hui, L.
author: Fingerle, V.
author: Lane, R.S.
journal: Int J Syst Evol Microbiol
volume: 70
issue: 2
pages: 849-856
year: 2020
pubmed: 31793856

31793856
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Margos, G.
author: Fingerle, V.
author: Lane, R.S.
journal: Submitted (02-OCT-2019) German National Reference Centre for Borrelia, Bavarian Health and Food Safety Authority, Veterinarstrasse 2, Oberschleissheim 85764, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17364:1
position: 17364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17364:1:source
so part of: sequence
organism: Borrelia maritima
mol type: genomic DNA
strain: CA690
isolation source: Ixodes spinipalpis
culture collection: ATCC:TSD-160
culture collection: DSM:107169
type material: type material of Borrelia maritima
plasmid: lp36
country: USA: Alameda County
collection date: 2009
collected by: Department of Environmental Science, University of California
genotype: ST551

2761123
type: Taxonomy
SIO_000068: taxonomy

DB723_RS05150
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05150
old locus tag: DB723_05150
so part of: sequence
location: complement(<1..739)
location: region:1-739:-1
so has part: feature:1-739:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:739:-1
position: 739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-739:-1:exon

DB723_RS05150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05150
old locus tag: DB723_05150
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MDIAVGGQGASADVENVKGIAKGIKTIVDTAKKSDAKLELKAAAEGDNNKEAGKLFAVNAVAAAGGDANDVKTAAEKAATAVSSVSGEQILAAIVDAAEKGDAGQAAGAAKNAIEAAIGSGVAGAADFNDDNIGKKNDQIAAAIVLRGLAKSGKFALNADGSAGKATLKSAAESAVKEVGGWLAEMIKAAEEMAKAESGSSDIVDIAGNGQGASADVENVKGIAKGIKTIVDTAKKSDAKLELKAA
SIO_010081: DB723_RS05150
subclass of: SO_0000673
so part of: DB723_RS05150
location: complement(<1..739)
location: region:1-739:-1
so has part: feature:1-739:-1:exon

WP_228459435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-739:-1:exon

DB723_RS05755
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05755
old locus tag: DB723_05155
so part of: sequence
location: complement(702..1535)
location: region:702-1535:-1
so has part: feature:702-1535:-1:exon
subclass of: SO_0000010

position:702:-1
position: 702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535:-1
position: 1535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702-1535:-1:exon

DB723_RS05755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05755
old locus tag: DB723_05155
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MGKKNDQIAAAIVLRGLAKSGKFALDAAGSAGKATLKSAAEEMAKAESGNSDIVDIARNGQGASADVGNVKGIAKGIKTIVDTAKKSDAKLELKAAAEGGSNKEAGKLFAVGADAGGAANDVKTAAEKAATAVSSVSGEQILAAIVDTAKKSDAKLELKAAAEGGSSNKEAGKLFAVNAVADGAANDVKTAAEKAATAVSSVSGEQILAAIVDAAEKGNAGKAAGAATNAIEAAIGGAGAADFNDNNGIGKKNDQIAAAIVLRGYCGYCGGRSRSKC
SIO_010081: DB723_RS05755
subclass of: SO_0000673
so part of: DB723_RS05755
location: complement(702..1535)
location: region:702-1535:-1
so has part: feature:702-1535:-1:exon

WP_267128514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:702-1535:-1:exon

DB723_RS05760
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05760
old locus tag: DB723_05160
so part of: sequence
location: complement(1532..2380)
location: region:1532-2380:-1
so has part: feature:1532-2380:-1:exon
subclass of: SO_0000010

position:1532:-1
position: 1532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2380:-1
position: 2380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532-2380:-1:exon

DB723_RS05760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05760
old locus tag: DB723_05160
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKKISSAIFLTAFIVFINCKNNAGEQAGAEGGKDSASIFYQSIIKLGNGFIDVFNAFGGLVADAFLKANPKKSDTKTYFDSITKTLKDTKEKLDKLSNEKGETNAAKDNAQATGKEISIESVVKEVGGWLAEMIKAAEEMAKAESGNSDIVDIARNGQGASADVENVKGIAKGIKTIVDTAKKSDAKLELKAAAEGGSSNKEAGKLFAVNAVADGGDAVVKTAAEKAATAVSSVSGEQILAAIVDAAEKDNAGQAAGAAKNAIEAAIGSGDAAADFDDNNMG
SIO_010081: DB723_RS05760
subclass of: SO_0000673
so part of: DB723_RS05760
location: complement(1532..2380)
location: region:1532-2380:-1
so has part: feature:1532-2380:-1:exon

WP_151553186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1532-2380:-1:exon

DB723_RS05765
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05765
so part of: sequence
location: 2815..3534
location: region:2815-3534:1
so has part: feature:2815-3534:1:exon
subclass of: SO_0000010

position:2815:1
position: 2815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3534:1
position: 3534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2815-3534:1:exon

DB723_RS05765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05765
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKKISSAIFLTAFIVFINCKNNAGEQAGAEGGKDSASIFYQSIIKLGNGFIDVFNAFGGLVADAFLKANPKKSDTKTYFDSITKTLKDTKEKLDKLSNEKGETNAAKDNAQATGKEISIESVVKEVGGWLAEMIKAAEEMAAKAESGNSDIVDIAGNGQGASANVENVKGIAKGIKTIVDTAKKSDAKLELKAAEGGSSNKEAGKLFAVGADADGNAMMLRLLLRRRLRLLVQLVGSRY
SIO_010081: DB723_RS05765
subclass of: SO_0000673
so part of: DB723_RS05765
location: 2815..3534
location: region:2815-3534:1
so has part: feature:2815-3534:1:exon

WP_188093278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2815-3534:1:exon

DB723_RS05770
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05770
old locus tag: DB723_05165
so part of: sequence
location: 3528..4136
location: region:3528-4136:1
so has part: feature:3528-4136:1:exon
subclass of: SO_0000010

position:3528:1
position: 3528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4136:1
position: 4136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3528-4136:1:exon

DB723_RS05770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05770
old locus tag: DB723_05165
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MLAAIVDAAEKGDAGQAAGAATNAIEAAIGSGVAADFGDNNIGKKNDQIAAAIVLRGLAKSGKFALDAAGSGKATLKSAAESAVGKTGGWLAEMIKAAEEMAAKAESGSSDIVDIAGNGQGASANVENVKGIAKGIKTIVDTAKKSDAKLELKAAAEGGSSNKEAGKLFAVDADAAVVMMLLLRLLLRRRLRLLVQLVGSRY
SIO_010081: DB723_RS05770
subclass of: SO_0000673
so part of: DB723_RS05770
location: 3528..4136
location: region:3528-4136:1
so has part: feature:3528-4136:1:exon

WP_267128515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3528-4136:1:exon

DB723_RS05170
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05170
old locus tag: DB723_05170
so part of: sequence
location: 4130..4993
location: region:4130-4993:1
so has part: feature:4130-4993:1:exon
subclass of: SO_0000010

position:4130:1
position: 4130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4993:1
position: 4993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4130-4993:1:exon

DB723_RS05170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05170
old locus tag: DB723_05170
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MLAAIVDAAEKGNAGQAAGAAKNAIEAAIGSGVAADFNDNNGIGKKNDQIAAAIVLRGLAKSGKFALDAAGSAGKATLKSAAEEMAKAESGNSDIVDIAVGGQGASANVENVKGIAKGIKTIVDTAKKSDAKLELKAAAEGGSNKEAGKLFAVNAVADAGDANVKTAAEKAATAVSSVSGEQILAAIVDAAEKGDAGKAAGEAKNAIEAAIGSGAAADFSDNNNGIGKKNDQIAAAIVLRGLAKSGKFALDADGSGKATLKSAAESAVGKMGGVRKLRKSAKKEKHF
SIO_010081: DB723_RS05170
subclass of: SO_0000673
so part of: DB723_RS05170
location: 4130..4993
location: region:4130-4993:1
so has part: feature:4130-4993:1:exon

WP_267128516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4130-4993:1:exon

DB723_RS05610
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05610
so part of: sequence
location: 5181..5315
location: region:5181-5315:1
so has part: feature:5181-5315:1:exon
subclass of: SO_0000010

position:5181:1
position: 5181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5315:1
position: 5315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5181-5315:1:exon

DB723_RS05610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05610
inference: COORDINATES: protein motif:HMM:NF017132.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLYKLNIHYTLIYKENTEKIDNALSPLITKTLATINKKSMHLLS
SIO_010081: DB723_RS05610
subclass of: SO_0000673
so part of: DB723_RS05610
location: 5181..5315
location: region:5181-5315:1
so has part: feature:5181-5315:1:exon

WP_267128513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5181-5315:1:exon

DB723_RS05185
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05185
old locus tag: DB723_05185
so part of: sequence
location: complement(6146..9973)
location: region:6146-9973:-1
so has part: feature:6146-9973:-1:exon
subclass of: SO_0000010

position:6146:-1
position: 6146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9973:-1
position: 9973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6146-9973:-1:exon

DB723_RS05185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05185
old locus tag: DB723_05185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014540447.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent DNA methyltransferase
translation: MKINDILKTNDPNISLYKELSKDFIKKENINKLKAFFILVKNKLSSIDYNSTEANVESLLKSIFEELNYSVEQQKCGQIEGVSSRVDILLFENDKYKVDFNNKLEESKKNNEPISAEDILLIAEVKRPTFSFNTKDKVKEAEDQLYRYLNQYQKHYGILSNGKVWRLYDKSKVLYGEKRYIEFDFSKIEEKEEYKEQEWFILFSYLIRKERYLKTSNLIEVEKEQIAQEKEIIQKTLREILYERPDDSLVFKIAKNIYDKEFKVSDKEITQHILASILEESIIFILRIFFIAYIEDNNIFKKILEENKLYRSSVSFRYFFYDENTKKKLGYKKIITIFNLLDKGSNAIKFPIFNGGLFAEDKVKYLNNESLLSISELEEILVKVLFFEEKNIKDKKFVEYSKLDPKSFGELYETLLEYDLRIADTTVHRIVEDGIYLIRTEEELENKKVNKVATYLKGNIYLTSRSLDRKRSGAYYTPDDLTDFMVTSSIEEQLKTKSPLDIKIIDNSCGSGHFLISCLDYLTEKVWHQLDKFEDVKKELGKEYSVIFKESEEYDVQDSISKELVLKRMLLKRCIYGVDINPISVEITMLSLWINTFIFGTPLSFIEHHIKVGNALLGYTKDEFFNIVKEKFESGFSLFKKRIKEITTILKDRYQKIKGINDTTKEDIEKSKKIYKECEESEDMGNLRVIFSLIKLYSLSCNKSLNIEFSDITAVISLIENILENKTSSEDKEKMEKIRKLSSYYKFFHYGIEFPDIQEGFDIVIGNPPWEKIKFNEAEFFSKYIPSYRKLSIEEQNKIRQKILGRDNHPLNIEYNEEKNSISTINNIYKSDFKDFTSGGDPNFFRYFIAFNLKLIKEKGNLTYLVPSAIWGESSSRALRKYIFTNYKLNYIYQFQNQKRFKDVDSRFKFSVFQIRNNKASTANFKAKFMIQNSDNILKEITRDLKNNKENAYKGIELHINQIKKLSPFQESIMEFKDNEEFNLISKMFSQFSPLSEKYIDFKKGLDPSIKNCKSLLKEYNNQNFIFLYSGANIHQFNSRFFKDKAAKESSKFLWINKEDLGKVLTKDNYYQVEKILYRRIASNTNERTMISALSPKNCYCMGSIYINYEKTPISIYKKLFIISIFNSLAFDYLVRRFALSTDIVKSCLYQCPMPQPEEDEILANSLYLTLVKNTSLLIAKNDSLNFSNLLYLEHFKFSKEKVNKILNLDTKDEFFKEKENENNFIVASLYSLTKKDFEVLLNDFKALKNKKGEGYILSLIKGYENYLRTVKLKV
SIO_010081: DB723_RS05185
subclass of: SO_0000673
so part of: DB723_RS05185
location: complement(6146..9973)
location: region:6146-9973:-1
so has part: feature:6146-9973:-1:exon

WP_151553188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6146-9973:-1:exon

DB723_RS05190
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05190
old locus tag: DB723_05190
so part of: sequence
location: complement(11071..11670)
location: region:11071-11670:-1
so has part: feature:11071-11670:-1:exon
subclass of: SO_0000010

position:11071:-1
position: 11071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11670:-1
position: 11670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11071-11670:-1:exon

DB723_RS05190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05190
old locus tag: DB723_05190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002657148.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MGKKQNKKEMILNDRFEDFIDKSQNLNNNRDENLIIYNDLKDQLKLNLKDDIDNKIQRMKILYEIKQKELYKYDGFKSFEQFIKSFIIAKTQAYTYLKVYEKVLEGVISIDKIKEVGFNGIYHAIQNQELSVINQEDINKSNKENIPIRILIKDNELYDFCKKDTKRVYFILEEIFKNKKDILSEIVIKYDNLKKKRNK
SIO_010081: DB723_RS05190
subclass of: SO_0000673
so part of: DB723_RS05190
location: complement(11071..11670)
location: region:11071-11670:-1
so has part: feature:11071-11670:-1:exon

WP_151553190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11071-11670:-1:exon

DB723_RS05195
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05195
old locus tag: DB723_05195
so part of: sequence
location: 12131..13048
location: region:12131-13048:1
so has part: feature:12131-13048:1:exon
subclass of: SO_0000010

position:12131:1
position: 12131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13048:1
position: 13048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12131-13048:1:exon

DB723_RS05195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05195
old locus tag: DB723_05195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MKAIKSNYKYQINANKLLSKDCKLKKIISVIIYLNKEFEKKYNVSIHKIHFDSEKLKRLRVHHQGDILRVLNSNIDKENKKETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLCIYKVSPIAYKLIDTYFSSTKADLIKKVKKEKDTLKVEQGVLRPQNIIENITVYNKKHINIYNKNSIQNSFFKKIKSAISRTKNPIKTLKNTLLNYKDFKNHLKHDYEVKDIKEFFLLKLNIYKNKIHFMRKTAPYKTDFYNIAREFKDNYTTKWKTNKITRFSGHAGTIANDILANILKKEIKFE
SIO_010081: DB723_RS05195
subclass of: SO_0000673
so part of: DB723_RS05195
location: 12131..13048
location: region:12131-13048:1
so has part: feature:12131-13048:1:exon

WP_151553192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12131-13048:1:exon

DB723_RS05200
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05200
old locus tag: DB723_05200
so part of: sequence
location: 13041..13580
location: region:13041-13580:1
so has part: feature:13041-13580:1:exon
subclass of: SO_0000010

position:13041:1
position: 13041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13580:1
position: 13580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13041-13580:1:exon

DB723_RS05200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05200
old locus tag: DB723_05200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010258675.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MSSLLEKLRNKKNNIKKRIIFNKIEEINSKKIYYTKIFKHLIGFKITNKGERLRLTFQKFNNNKDFIFFNLFPLKENDKFLEIRYRHDKLDKPFFLKKENNKTYAIKKLYYIEFAFKSGSIKAYVQSLRTLLRKNKENTEYYQFNLSHLKKMEKKVYEFYNKKIKDEGVIKKWIKKNQL
SIO_010081: DB723_RS05200
subclass of: SO_0000673
so part of: DB723_RS05200
location: 13041..13580
location: region:13041-13580:1
so has part: feature:13041-13580:1:exon

WP_151553194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13041-13580:1:exon

DB723_RS05205
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05205
old locus tag: DB723_05205
so part of: sequence
location: 13556..14305
location: region:13556-14305:1
so has part: feature:13556-14305:1:exon
subclass of: SO_0000010

position:13556:1
position: 13556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14305:1
position: 14305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13556-14305:1:exon

DB723_RS05205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05205
old locus tag: DB723_05205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890338.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDQKKPIIITLASLKGGVGKSSLSIIFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISNIKKHNVYEFLKGNTYFDKCENKINKFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKSFNFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQAERWSIESFSILTETIKNIQNIKNKKYTISIIENQFIKNRNTLKEVEDVLHKKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYMEAENALKDIL
SIO_010081: DB723_RS05205
subclass of: SO_0000673
so part of: DB723_RS05205
location: 13556..14305
location: region:13556-14305:1
so has part: feature:13556-14305:1:exon

WP_151553196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13556-14305:1:exon

DB723_RS05210
type: Gene
subclass of: SO_0000704
RO_0002162: 2761123
locus tag: DB723_RS05210
old locus tag: DB723_05210
so part of: sequence
location: 15673..16368
location: region:15673-16368:1
so has part: feature:15673-16368:1:exon
subclass of: SO_0000010

position:15673:1
position: 15673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16368:1
position: 16368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15673-16368:1:exon

DB723_RS05210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2761123
locus tag: DB723_RS05210
old locus tag: DB723_05210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006068318.1
note: The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIMPL domain-containing protein
translation: MLRRKEIYFLLFSLLLFISSIIISHGIKSIGIKNENYITVKGLSEREILSTSSSWEFRYSLTGNTVNDINKANNLSLSRIRNFFLKHGFSEDNIKMGFMEFNEENYKESLYKYRADISLSVHTKNIKKMEAAEKNIADLYNQGILINNSGGPRYYFDNINDIKPEMLADSIRNAKLAALEFAKHSNSKLGKIKNANQGYFEFLPIDRSLGAQERYPKKILRIVTTVSYYLD
SIO_010081: DB723_RS05210
subclass of: SO_0000673
so part of: DB723_RS05210
location: 15673..16368
location: region:15673-16368:1
so has part: feature:15673-16368:1:exon

WP_151553198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15673-16368:1:exon