Pontibrevibacter nitratireducens strain ALG8 plasmid unnamed5, complete sequence.
type: Entry
definition: Pontibrevibacter nitratireducens strain ALG8 plasmid unnamed5, complete sequence.
sequence version: NZ_CP049816.1
sequence date: 2023-05-27
sequence: sequence
division: CON
label: NZ_CP049816.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN14278080
keyword: RefSeq
source: Pontibrevibacter nitratireducens
organism: Pontibrevibacter nitratireducens
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Pontibrevibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP049816.1.\nBacteria and source DNA available from Cong Sun.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. DEC-2019\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Oxford Nanopore; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/27/2023 03:21:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,480\nCDSs (total) :: 3,427\nGenes (coding) :: 3,361\nCDSs (with protein) :: 3,361\nGenes (RNA) :: 53\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 3\nPseudo Genes (total) :: 66\nCDSs (without protein) :: 66\nPseudo Genes (ambiguous residues) :: 0 of 66\nPseudo Genes (frameshifted) :: 45 of 66\nPseudo Genes (incomplete) :: 41 of 66\nPseudo Genes (internal stop) :: 12 of 66\nPseudo Genes (multiple problems) :: 24 of 66\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 33885
topology: circular
so has quality: SO_0000988
location: 1..33885
location: region:1-33885:1
RO_0002162: 2758038

NZ_CP049816
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN14278080
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Monaibacterium sp. ALG8 with diverse plasmids
author: Sun, C.
journal: Unpublished

2
title: Direct Submission
author: Sun, C.
journal: Submitted (04-MAR-2020) College of Life Science, Zhejiang Sci-Tech University, 928 No.2 Avenue, Xiasha Higher Education Zone, HangZhou 310018, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33885:1
position: 33885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-33885:1:source
so part of: sequence
organism: Pontibrevibacter nitratireducens
mol type: genomic DNA
strain: ALG8
isolation source: seawater in intertidal zone
plasmid: unnamed5
country: China: zhoushan
lat lon: 30.02 N 122.34 E
collection date: 2018-09

2758038
type: Taxonomy
SIO_000068: taxonomy

G8E03_RS16835
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16835
old locus tag: G8E03_16855
pseudo: true
so part of: sequence
location: complement(join(33828..33885,1..>684))
location: region:1-33885:-1
so has part: feature:1-684:-1:exon
so has part: feature:33828-33885:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33885:-1
position: 33885
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-684:-1:exon

position:684:-1
position: 684
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33828-33885:-1:exon

position:33828:-1
position: 33828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

G8E03_RS16835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16835
old locus tag: G8E03_16855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611656.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: G8E03_RS16835
subclass of: SO_0000673
so part of: G8E03_RS16835
location: complement(join(33828..33885,1..>684))
location: region:1-33885:-1
so has part: feature:1-684:-1:exon
so has part: feature:33828-33885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33828-33885:-1:exon

G8E03_RS16840
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16840
old locus tag: G8E03_16860
so part of: sequence
location: 897..1502
location: region:897-1502:1
so has part: feature:897-1502:1:exon
subclass of: SO_0000010

position:897:1
position: 897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502:1
position: 1502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897-1502:1:exon

G8E03_RS16840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16840
old locus tag: G8E03_16860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011454660.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSEMRLHDTNGNRLYLNAEERAAFLAVARRKPARDRTLCETLLFTGCRPSEMLEITPARVDLSGGTIAIRSLKKRKDASGRNKIVYRSVPVPPDYLDTLNTAHGIREAQKSRKQAATPIWPLSRVRVWQIVKGIMIEAGIPDAPHRSPKGLRHGFGINATVNGIPLHMLQKWMGHAQLSTTAIYADAVGKEEQDIAARMWG
SIO_010081: G8E03_RS16840
subclass of: SO_0000673
so part of: G8E03_RS16840
location: 897..1502
location: region:897-1502:1
so has part: feature:897-1502:1:exon

WP_166195402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:897-1502:1:exon

G8E03_RS16845
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16845
old locus tag: G8E03_16865
pseudo: true
so part of: sequence
location: <2068..2641
location: region:2068-2641:1
so has part: feature:2068-2641:1:exon
subclass of: SO_0000010

position:2068:1
position: 2068
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2641:1
position: 2641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2068-2641:1:exon

G8E03_RS16845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16845
old locus tag: G8E03_16865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611562.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: G8E03_RS16845
subclass of: SO_0000673
so part of: G8E03_RS16845
location: <2068..2641
location: region:2068-2641:1
so has part: feature:2068-2641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2068-2641:1:exon

G8E03_RS16850
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16850
old locus tag: G8E03_16870
so part of: sequence
location: 2767..3723
location: region:2767-3723:1
so has part: feature:2767-3723:1:exon
subclass of: SO_0000010

position:2767:1
position: 2767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3723:1
position: 3723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2767-3723:1:exon

G8E03_RS16850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16850
old locus tag: G8E03_16870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007349772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TAXI family TRAP transporter solute-binding subunit
translation: MNRIAFAFCSIAALSGAATAQELSIATGGTGGTYYPYGSGFAQVIERHIEGTSVTVEVTAASVENLALLTRGETDIIIAAADAVKNAVEGLDAFEGRRVDNIAALGALYANVVQIAVLEESGIQSLDDLRNKRLSVGAPGSATELTSRRMLELQGITYEEVGAQRLSYTESVDAMRDGSLDAAVILAAPPASSVMALAAGQDISILPLTQEEVDRIVESESAFAPYVLRAGTYDGQDEDVLTFSTPNMLLVNDAMDEELAYQITRVLFEYTQEIVAVHPSAKETTVEFSLASSTVPLHPGARRYYEEVGAEIPARLLP
SIO_010081: G8E03_RS16850
subclass of: SO_0000673
so part of: G8E03_RS16850
location: 2767..3723
location: region:2767-3723:1
so has part: feature:2767-3723:1:exon

WP_166195405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2767-3723:1:exon

G8E03_RS17550
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS17550
so part of: sequence
location: complement(3768..4091)
location: region:3768-4091:-1
so has part: feature:3768-4091:-1:exon
subclass of: SO_0000010

position:3768:-1
position: 3768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4091:-1
position: 4091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3768-4091:-1:exon

G8E03_RS17550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS17550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVNPLPADPYEHTITRHDLGYIDDPVPISRGAQYSATPKNLTKSRSGGIVQETAVEENVPVDRLEAIGHEPARNRVLPVKTPFGLLQQVRHDAVSALAGYQQTVSLC
SIO_010081: G8E03_RS17550
subclass of: SO_0000673
so part of: G8E03_RS17550
location: complement(3768..4091)
location: region:3768-4091:-1
so has part: feature:3768-4091:-1:exon

WP_240910512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3768-4091:-1:exon

G8E03_RS16860
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16860
old locus tag: G8E03_16880
so part of: sequence
location: 4240..6303
location: region:4240-6303:1
so has part: feature:4240-6303:1:exon
subclass of: SO_0000010

position:4240:1
position: 4240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6303:1
position: 6303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4240-6303:1:exon

G8E03_RS16860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16860
old locus tag: G8E03_16880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018918062.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter fused permease subunit
translation: MQEKSEPICADTNKDLTGRIIPAPPWPIAKLIILLSIVLCGFQLYAAGIRPMGLFYQRPIHLMLIMMVAFLVFPAFGLHRKRGVMGWVIDAAFFTGAIVSGLYIVVNLDAIIARAGFWTRTDIIVGSFAIITLLEASRRVVGMGITVIGFIFVLYALAGPRGALPWLGEFMPGILSHRGASVERLVSQLYLGQEGIFGLPLGIAATYVFIFVLFGAVLEVTGGGRFFIDLSFAATGRQRGGPAKAAVVASLSMGSITGSAIANVATTGPFTIPLMKRLGYKPAQAGGIEAAASTGGQITPPLMGAGAFLIAEYTGTPYVEIIKVSIYPALLYLLTVYLFVHIIALKQNMHGIPAKDLPSVRAVMKEGWHFLLPLIMLIYLLVIGLSPMRVGFYAILSILAVAVLRYMWGWLRNEPTRVHHMHPDGTVKEEIIYERLPLALVLKAGLNKAVEACELGVRNALTVSLACAIGGIIVGVVGLTGLGLKFSALMMTFSGGNVVLALFIVMIASLILGVGLPVTASYIVLIILVGPAMSSEFGIPLLIVHLVVFWYSQDSNVTPPIALAGFAAAAIAKSPPIATSLQAWKFAKGLYIIPLFMVFNPEIIIGGPVPLVLWSGVLAFFTCVGFVAALEGYLFGRINGVSRLVVLAAGIGTLQQILWLEAISLAVMVLMIGLNWMAERNREALPA
SIO_010081: G8E03_RS16860
subclass of: SO_0000673
so part of: G8E03_RS16860
location: 4240..6303
location: region:4240-6303:1
so has part: feature:4240-6303:1:exon

WP_166195411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4240-6303:1:exon

G8E03_RS16865
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16865
old locus tag: G8E03_16885
so part of: sequence
location: complement(6386..7078)
location: region:6386-7078:-1
so has part: feature:6386-7078:-1:exon
subclass of: SO_0000010

position:6386:-1
position: 6386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7078:-1
position: 7078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6386-7078:-1:exon

G8E03_RS16865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16865
old locus tag: G8E03_16885
inference: COORDINATES: protein motif:HMM:NF013757.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MTLADLSVALDAPKSSLLIMLRPLVDQDYLIHESNTYRLGPRMFQFASAILANSRFSSLVRHHMTLLRDWTDETVIYATLDLDSRRIVYEDVVEGSSLIRYVVNAGANRPAYPTASGRVLIGHAPTEWQNRYFADLQADKLTSRTITDIAGIKAAVKECRQRGVCFTNGEAIDGAAGVSAPVRDRAGEVIGVLVLGAPRERGVERRELYERKTVDAADRLSVAIGYRPPS
SIO_010081: G8E03_RS16865
subclass of: SO_0000673
so part of: G8E03_RS16865
location: complement(6386..7078)
location: region:6386-7078:-1
so has part: feature:6386-7078:-1:exon

WP_166195414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6386-7078:-1:exon

G8E03_RS17555
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS17555
so part of: sequence
location: complement(7485..7607)
location: region:7485-7607:-1
so has part: feature:7485-7607:-1:exon
subclass of: SO_0000010

position:7485:-1
position: 7485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7607:-1
position: 7607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7485-7607:-1:exon

G8E03_RS17555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS17555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: CoA transferase
translation: MTGECDILVENRPGYDAVFQGMCDLMNVTGISEGEPARAL
SIO_010081: G8E03_RS17555
subclass of: SO_0000673
so part of: G8E03_RS17555
location: complement(7485..7607)
location: region:7485-7607:-1
so has part: feature:7485-7607:-1:exon

WP_240910513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7485-7607:-1:exon

G8E03_RS16870
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16870
old locus tag: G8E03_16890
so part of: sequence
location: complement(7666..7824)
location: region:7666-7824:-1
so has part: feature:7666-7824:-1:exon
subclass of: SO_0000010

position:7666:-1
position: 7666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7824:-1
position: 7824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7666-7824:-1:exon

G8E03_RS16870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16870
old locus tag: G8E03_16890
inference: COORDINATES: protein motif:HMM:NF014564.2
GO function: GO:0008410 - CoA-transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA transferase
translation: MAAQYLADLGAEVIKIERASLGKDARQFGPPFAQRAAGTMSSEDFAAHLVQS
SIO_010081: G8E03_RS16870
subclass of: SO_0000673
so part of: G8E03_RS16870
location: complement(7666..7824)
location: region:7666-7824:-1
so has part: feature:7666-7824:-1:exon

WP_166195417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7666-7824:-1:exon

G8E03_RS16875
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16875
old locus tag: G8E03_16895
so part of: sequence
location: complement(7877..9097)
location: region:7877-9097:-1
so has part: feature:7877-9097:-1:exon
subclass of: SO_0000010

position:7877:-1
position: 7877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9097:-1
position: 9097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7877-9097:-1:exon

G8E03_RS16875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16875
old locus tag: G8E03_16895
EC number: 2.8.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017450443.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA transferase
translation: MILTDAPDPRRGPLSGLRVVDLTINVLGPVCTQILGDMGADIIKVEEPKGDYTRHVGPRVSDDMGALFLGLNRNKRSIVLNLKDSQDSAVLTRLLETADVMVHAMRPGAIDRLGLTYDKVRAIKPDIIYASATGFRPGSSRRETPAYDDVVQGLTGTAAMNGWRDGVPDYLPTVIADKHSGYVLANAITSALFWRERTGEGQEVHVPMMESVIVFNLLEHLWGRALPATGGKAGYTRLMNADRRPYRTADGYLCVMANTDAQWQRFLELLGHGDLARDPRYERTQQRSANIQDLYAIVAKRLVDRTTADWGAALDQADIPNGPASTFDELFEDPYLLETGFFETNTHPTEGAMTLPGIAPSFSACTPSIRRLPPRLGADTHEILNELAQTPDRNRHENDLKIRSRL
SIO_010081: G8E03_RS16875
subclass of: SO_0000673
so part of: G8E03_RS16875
location: complement(7877..9097)
location: region:7877-9097:-1
so has part: feature:7877-9097:-1:exon

WP_166195420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7877-9097:-1:exon

G8E03_RS16880
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16880
old locus tag: G8E03_16900
so part of: sequence
location: complement(9094..9561)
location: region:9094-9561:-1
so has part: feature:9094-9561:-1:exon
subclass of: SO_0000010

position:9094:-1
position: 9094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9561:-1
position: 9561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9094-9561:-1:exon

G8E03_RS16880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16880
old locus tag: G8E03_16900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013397153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MaoC family dehydratase N-terminal domain-containing protein
translation: METLGLGLFFEDVTVGRTFKTIGRTISEADIINFVTCTGMTEVLFTNSVFQEEESLIKGRVVPSALVYTFMEGLLVQSTMQHTGFAFLEMSYKVGGPTVAGDTIHCEVEIVEARRSKKRPDKGIVTSHNRVINQRGELVLDYKPTRMVNARTKGE
SIO_010081: G8E03_RS16880
subclass of: SO_0000673
so part of: G8E03_RS16880
location: complement(9094..9561)
location: region:9094-9561:-1
so has part: feature:9094-9561:-1:exon

WP_166195423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9094-9561:-1:exon

G8E03_RS16885
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16885
old locus tag: G8E03_16905
so part of: sequence
location: complement(9582..10721)
location: region:9582-10721:-1
so has part: feature:9582-10721:-1:exon
subclass of: SO_0000010

position:9582:-1
position: 9582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10721:-1
position: 10721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9582-10721:-1:exon

G8E03_RS16885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16885
old locus tag: G8E03_16905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015064857.1
GO function: GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA dehydrogenase family protein
translation: MFKLGEDQILVQDLVRRVAREKVAPRAQEIDRTAEYPHDMFEMLKELGLFLLPFPEEYGGANSMLSACVAVEEFGRVCYNTAYLLLVQWVPIGAILAGGTQEQKDRYLPGLAKGELRGALSLTEPQSGSDVSGIKTKARKDGGDYILDGNKIWCTNSGMADFVLVAAKTGTGDERGKINLFIVDTDTPGFNVGPKEDKMGARGVPSHSLYLENCRVPASAMLGDEETGFRVAMAALNDSRPIIGARAVGCAQGALDHAVEFIKNRHAFGQTIADFQGIKWMVADMETQTAAARLLVYQAAAALDAGVKGKELAHLAAMAKAFSTDTAMKVATDAVQLFGAAGISNEYGINRYFRDAKVLQIIEGTNQIQRNIISRSVLA
SIO_010081: G8E03_RS16885
subclass of: SO_0000673
so part of: G8E03_RS16885
location: complement(9582..10721)
location: region:9582-10721:-1
so has part: feature:9582-10721:-1:exon

WP_166195426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9582-10721:-1:exon

G8E03_RS16890
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16890
old locus tag: G8E03_16910
so part of: sequence
location: 11367..12227
location: region:11367-12227:1
so has part: feature:11367-12227:1:exon
subclass of: SO_0000010

position:11367:1
position: 11367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12227:1
position: 12227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11367-12227:1:exon

G8E03_RS16890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16890
old locus tag: G8E03_16910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009504603.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MLALFPTTDGRQVHVVKSVARTLETLELFDELRRPVNIVEVAMRLGYPQSSTSALLKSMVALGFLTYDNGARTYYPTDRVPLIGSWMSPALFGGGALLRLVDTVVERSGLLCLLGAQNGDHALYYHVSNPKKSVAHHIAVGTRRPLGASGVGYVLLSTMDDNEIRRMFRRINAYRPDGQDPLDIEALINSVQKVREQGYFVSIDQVVQGSGLIAMLLPRECTDRPLAIGLGAPTSMIQDREHELVSLLREEIDKHFGSYVELAERRRTASMWKVPKEGKIRGAGMR
SIO_010081: G8E03_RS16890
subclass of: SO_0000673
so part of: G8E03_RS16890
location: 11367..12227
location: region:11367-12227:1
so has part: feature:11367-12227:1:exon

WP_166195429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11367-12227:1:exon

G8E03_RS16895
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16895
old locus tag: G8E03_16915
so part of: sequence
location: 12331..13470
location: region:12331-13470:1
so has part: feature:12331-13470:1:exon
subclass of: SO_0000010

position:12331:1
position: 12331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13470:1
position: 13470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12331-13470:1:exon

G8E03_RS16895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16895
old locus tag: G8E03_16915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004566161.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CaiB/BaiF CoA-transferase family protein
translation: MGPLAGVKIVELAGIGPGPMCAMLLADLGATVIRVERKVESQLGIKRPPKFNLLNRGRRQVAVDLKDPEGVAFVRALVAESDAVIEGFRPGVTERLGLGPDDLFRVNPRVVYGRMTGWGQEGPLAQSAGHDLNYIAITGALSMIGREGQPPTVPLSLVGDLGGGALYLAFGICAAIIEARQSGKGQVVDAAISDGVAHLMTNFHGLLGAGIITPERGTNIIDGGAPYYDVYLCKDGRYVSIAPIEPKFFALLVKLLELPEDTMPPQNDKARWPEMRAIFAAKFLEKTRDEWTELLGKTDACFAPVLTLEEAPAHPHMQARNVYFEADGVVQPVPAPRFSRTVPDVPEPVVPAAETDPAHALEGWEVLKHLESWKEKGAL
SIO_010081: G8E03_RS16895
subclass of: SO_0000673
so part of: G8E03_RS16895
location: 12331..13470
location: region:12331-13470:1
so has part: feature:12331-13470:1:exon

WP_166195432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12331-13470:1:exon

G8E03_RS16900
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16900
old locus tag: G8E03_16920
so part of: sequence
location: complement(13815..15914)
location: region:13815-15914:-1
so has part: feature:13815-15914:-1:exon
subclass of: SO_0000010

position:13815:-1
position: 13815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15914:-1
position: 15914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13815-15914:-1:exon

G8E03_RS16900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16900
old locus tag: G8E03_16920
inference: COORDINATES: protein motif:HMM:NF024938.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetate--CoA ligase family protein
translation: MTFPDPNLDHIFRPRSVAIVGASNDPSRISGRPLRYLKERGYKGKIYPINPTRDVVQGMKAWPSLADLPEAPDVAILAIPSTLIPGVLRDGAVIGLKGAIIMSSGFAEAGEEGAVLQAEITAIAQETGIRILGPNCVGLFSTNINFYGTFTQSIDRDVPPLGGVAVVSQSGAYGGYIAYLASQRGLGINYWVTTGNEADLEVGECIAWLAGRDDVKVIALYLEGVRKGPAFREGLARARAAGKPVIAMKVGRSAAGEKAAQSHTASMAGSDDVYDAIFRDYGVYRATTTEEQLDIAEACLTGPYPVGRKLGILTLSGGVGVQMCDAAEVYGLDVATMPEDAGRKLKKLLPFAAVGNPIDTTAQVMNDMSLLSENIRIVLEEGGYDMIVFFLTTTPAADAYAIPIRDAILKGLRGQKDKLVVLCMGAREEIRKSYREMGFLVYQDADRAVQIAGALTHFGQAFATVPRHAPVPLGRRVEGTGPMSEHAAKKVLASAGVPFLTEVLATTAEEAAKAAKTAGGPVAMKVASPDIQHKTEIGGVALNVATVNVRAAFHRLTHNVAEKAPDATLEGILVAPMAPKGIEVIVGTITDAVFGPVVMFGMGGILVELVPDVTFQPAPFDLDTAREMVARIKAAPLFDGYRGAPKADTEALAQLLSNLSLFAAANAGTLQSIDLNPVLVLEDGKGVVALDAVVERRSA
SIO_010081: G8E03_RS16900
subclass of: SO_0000673
so part of: G8E03_RS16900
location: complement(13815..15914)
location: region:13815-15914:-1
so has part: feature:13815-15914:-1:exon

WP_166195435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13815-15914:-1:exon

G8E03_RS16905
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16905
old locus tag: G8E03_16925
so part of: sequence
location: 16141..17157
location: region:16141-17157:1
so has part: feature:16141-17157:1:exon
subclass of: SO_0000010

position:16141:1
position: 16141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17157:1
position: 17157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16141-17157:1:exon

G8E03_RS16905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16905
old locus tag: G8E03_16925
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF024989.2
GO function: GO:0070402 - NADPH binding [Evidence IEA]; GO:0003960 - NADPH:quinone reductase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADPH:quinone oxidoreductase family protein
translation: MSLPKSMKALVLRDYAGWQSAAVEDVPLPVPGERDVLIKVAAASLNFADLLMMEGKYQVKPDLPFIAGRDAAGVVVAAGPGVTGFKVGDRVCTQDSTGAFAEYDCSPDWSCTVLPPEIGFEDAAACATAIATVAGAMKLRADLKPGQSVIITGATGGVGSMAIQYALLLGVRPIAVVSNEEKAALARSLGAEAVVLTAGMADPVQEVRLAIREQGFHHVDAIIDMVGGNVGEGALRCVRPGGRYVIVGFASGDLPTLNAGYLLVKDVMVFGSSLQRLMRARDPELTQAVHDAFAALAVGKLKSQIDEIFPLSDSAAGFERMARRQALGKVVFSVGAAD
SIO_010081: G8E03_RS16905
subclass of: SO_0000673
so part of: G8E03_RS16905
location: 16141..17157
location: region:16141-17157:1
so has part: feature:16141-17157:1:exon

WP_166195438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16141-17157:1:exon

G8E03_RS16910
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16910
old locus tag: G8E03_16930
so part of: sequence
location: complement(17306..18466)
location: region:17306-18466:-1
so has part: feature:17306-18466:-1:exon
subclass of: SO_0000010

position:17306:-1
position: 17306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18466:-1
position: 18466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17306-18466:-1:exon

G8E03_RS16910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16910
old locus tag: G8E03_16930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012971023.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MTGWSVTSVEPLLPEEASRHRAALDDLVVELSAAAAGLRESLPQGLRAPLADAVRAMNCYYSNLIEGHDTHPHDIERALAADFSREPEQRDLQLEALAHIRVQKWVDSGGLRAHPMARESLCEIHARFCENLPESLLVLEDGTRIEGGALRTGHVRVGRHVAPEAEAVPRLLEHMQQRYAMLGRAGGILGLACAHHRLMWVHPFADLNGRVGRMVSHAWLRTAVGSAGLWSVSRGLARNEAEYKRRLMAADEPRHGGADGRGALSEQRLAEFARFFLETCLDQVRFMEGLMRPDQLRGRIEAWATQETAQGRLPAGAWPVLREALYTGEVARAALPGLLGVGERQARNVSAALVGAGALNAQSSRAPLRLTFSARLAGVWMPGLFP
SIO_010081: G8E03_RS16910
subclass of: SO_0000673
so part of: G8E03_RS16910
location: complement(17306..18466)
location: region:17306-18466:-1
so has part: feature:17306-18466:-1:exon

WP_166195441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17306-18466:-1:exon

G8E03_RS16915
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
gene: repA
locus tag: G8E03_RS16915
old locus tag: G8E03_16935
so part of: sequence
location: 18749..19927
location: region:18749-19927:1
so has part: feature:18749-19927:1:exon
subclass of: SO_0000010

position:18749:1
position: 18749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19927:1
position: 19927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18749-19927:1:exon

G8E03_RS16915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
gene: repA
locus tag: G8E03_RS16915
old locus tag: G8E03_16935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008186599.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MAQRQERIDRLVGDHAARLSERLQAHRAQLFPPDSRKELRRFTSGEAATLLGVKDAYLRKLHLEGKGPHPEVRTGGRRYYSPADIQALREMLEQGAKSPGTYLPGRRAGDPLQVITVINFKGGSGKTTTSAHLAQKCALDGYRVLAIDLDPQASLSALHGFQPEFDLPDGGTLYDAIRYDDPVPLTDVIQKTYFTNLDLIPGNLDLMEFEHDTPRALAARDSNLFFTRIGDKLMEVEQDYDIVVVDCPPQLGYITMSALSAATAVLVTVHPQMLDVMSMCQFLLMTSNLLGVVAEAGGDMNYDWMRYVITRYEPGDGPQNQMVSFMRSMFGEHVLNHTMLKSVAISDAGITKQTLYEVDRSQFTRSTYERAMESLNAVNGEIEDLIQQAWGR
SIO_010081: G8E03_RS16915
subclass of: SO_0000673
so part of: G8E03_RS16915
location: 18749..19927
location: region:18749-19927:1
so has part: feature:18749-19927:1:exon

WP_166195444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18749-19927:1:exon

G8E03_RS16920
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
gene: repB
locus tag: G8E03_RS16920
old locus tag: G8E03_16940
so part of: sequence
location: 19929..20909
location: region:19929-20909:1
so has part: feature:19929-20909:1:exon
subclass of: SO_0000010

position:19929:1
position: 19929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20909:1
position: 20909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19929-20909:1:exon

G8E03_RS16920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
gene: repB
locus tag: G8E03_RS16920
old locus tag: G8E03_16940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002724987.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MARKDLLKGLMDDSAKPPARPDDTSGDHARVDAVRPRYQKGAIGAVSQSIAELKSRSLTDIDPHMIEAGGIEDRLEYDEGEHAALMESMRNYGQQVPILVRPSPQDSTRYQIVYGRRRVLAARDLGIPIRAMIRDLDDQDLILAQGQENTARRDLSFIEKVNFASQMRDAGYARNLICDALHVDKTTLSRMIQVADAVPSQVIVAIGSAHGVGRPRWLKLGELLRASDMETEGAVAIAQLPTHGPTSQDRFEGLMNALLDATRSPKRPAPAPTRLTGADDTPLATVRHKGKKIAFDFDTAEGARFAEWLTEHLPEIHQTWKTRDDE
SIO_010081: G8E03_RS16920
subclass of: SO_0000673
so part of: G8E03_RS16920
location: 19929..20909
location: region:19929-20909:1
so has part: feature:19929-20909:1:exon

WP_166195447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19929-20909:1:exon

G8E03_RS16925
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
gene: repC
locus tag: G8E03_RS16925
old locus tag: G8E03_16945
so part of: sequence
location: 21090..22169
location: region:21090-22169:1
so has part: feature:21090-22169:1:exon
subclass of: SO_0000010

position:21090:1
position: 21090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22169:1
position: 22169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21090-22169:1:exon

G8E03_RS16925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
gene: repC
locus tag: G8E03_RS16925
old locus tag: G8E03_16945
inference: COORDINATES: protein motif:HMM:NF040974.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MKHITATPFGRRAIDLARIRRESEQRAVIHIPRDKWDLLNAFEIAAPEFGLSHRQMNVLRALLSLHGPRVLDSSGSLIVFASNRKIAERAQNMPESTMRRHVACLIDSGFLARHDSANGKRFRTRRDGEAVAFGLDLTPLLARAEEIIAMAAKVTEAEEQRRDLRARLSAMLRDIMTLNPDQDLIEVRRSLRRKSPLDVLQSLFKRLSALHNALLDRLEPSEKTCVSSSNDARNEQHIQSQHTEEITLHTVLDHCPALLDHLDDTRVDWRNVTDAALRIAPMMGVSREVVTRLTPRVGLQRMAVSICLLLQRFDEVKSPTAYLTWLCEHGRLGKELRKLTAVNSNMEHRLRPSDAIGGW
SIO_010081: G8E03_RS16925
subclass of: SO_0000673
so part of: G8E03_RS16925
location: 21090..22169
location: region:21090-22169:1
so has part: feature:21090-22169:1:exon

WP_166195450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21090-22169:1:exon

G8E03_RS16930
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16930
old locus tag: G8E03_16950
so part of: sequence
location: 22187..23737
location: region:22187-23737:1
so has part: feature:22187-23737:1:exon
subclass of: SO_0000010

position:22187:1
position: 22187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23737:1
position: 23737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22187-23737:1:exon

G8E03_RS16930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16930
old locus tag: G8E03_16950
inference: COORDINATES: protein motif:HMM:NF037707.2
GO function: GO:0004521 - RNA endonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas3''
translation: MSASAKPAMAWGKYDRESGASHALVAHCLDVAMVLEAVMGAPRIRRGLQKLTEIPVDDRMLSRLCVLAYLHDVGKLAPGFQLKIAEQAGRGILLRALRMPANPVRDIAVALEDWAGPATEGYIAAMMAHHGQPIQIADAREASVKDSRFDGREDAKAYARIARTTWPEAFAPGGALPAEPAFMAQWAGLLSIADWIGSDADHFPFHEVVTQDYAQLARRQANRAVRMCGMIGAAAPVPDFAALTGFAQPRPLQAKIAEIPSDQQLMILEAETGSGKTEAALWRFVHLLVAGEVSALYFAVPTRAAARQLHRRVDEAVQRFLGIEAVLAVPAQLASGEATGTRLPGWEVRWDDDAPRGARWAAEHATRFLSAQVAVGTVDQVMLAGLQTKHALARGAGLSRALLVVDEVHASDTYGRAVLAPFLRDHMATGGHVLLMSATLGAGAGDPQHGAGGARLSDSARRCAVPVRRRRAHIALRALRGGGSRPAGCRGGGCSGQGQQGRGAGGLRFANSGAKP
SIO_010081: G8E03_RS16930
subclass of: SO_0000673
so part of: G8E03_RS16930
location: 22187..23737
location: region:22187-23737:1
so has part: feature:22187-23737:1:exon

WP_166195453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22187-23737:1:exon

G8E03_RS16935
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16935
old locus tag: G8E03_16955
so part of: sequence
location: 23658..24308
location: region:23658-24308:1
so has part: feature:23658-24308:1:exon
subclass of: SO_0000010

position:23658:1
position: 23658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24308:1
position: 24308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23658-24308:1:exon

G8E03_RS16935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16935
old locus tag: G8E03_16955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEAALGKASRAGGLVVCGSQTLEQSLDIDADFLITDLAPVDVLLQRFGRLHRHDRARPEGFEQPRAVIALPENGLASLTKPSFFNGLGRWSEGGIYMDLAGLEATRRLIGAHPVWKIPAMNRMLVERATHPRTLEALTQQMGESWVADRQGLEGLSLAESAAGRRLRLDRAMPFETLEFPDYDEHVATRLGAQGPLLRRGGGRASRIKSPGWRVRC
SIO_010081: G8E03_RS16935
subclass of: SO_0000673
so part of: G8E03_RS16935
location: 23658..24308
location: region:23658-24308:1
so has part: feature:23658-24308:1:exon

WP_166195456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23658-24308:1:exon

G8E03_RS16940
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16940
old locus tag: G8E03_16960
so part of: sequence
location: 24430..24690
location: region:24430-24690:1
so has part: feature:24430-24690:1:exon
subclass of: SO_0000010

position:24430:1
position: 24430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24690:1
position: 24690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24430-24690:1:exon

G8E03_RS16940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16940
old locus tag: G8E03_16960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLLHDPLISDQAGRLFSLPGLFAALSRGEVSDLPALRPHQRAAWHMTCVQIAALACWQAGQGDLAEDEGGWRDMLLGLTQGEEAP
SIO_010081: G8E03_RS16940
subclass of: SO_0000673
so part of: G8E03_RS16940
location: 24430..24690
location: region:24430-24690:1
so has part: feature:24430-24690:1:exon

WP_166195459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24430-24690:1:exon

G8E03_RS16945
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16945
old locus tag: G8E03_16965
so part of: sequence
location: 24763..25905
location: region:24763-25905:1
so has part: feature:24763-25905:1:exon
subclass of: SO_0000010

position:24763:1
position: 24763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25905:1
position: 25905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24763-25905:1:exon

G8E03_RS16945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16945
old locus tag: G8E03_16965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATPDALDLLITSRNHDLKREIAAEAEAQDWLFALVSLQVSEGYGGRGNHGIARMNGGSSSRAMVARVPMGAGLRIDPSAWFRRDVTALLRARAEGRHRHIGTEGGPALIWTLPWPEGRKLSIGALDPWFVEVCRRVRLYRDAAGAIRAMRATSTAGRIEAKAQKGAVGDPWAPVHKGEGKAFTLSSGDFDYRTIDKLYFGTDWERPLLSTAQPDDADGPVLLLFEALARGNSKTEGFRSRVVVMPRALNGREVDAGVFSKEQIADIAEGAKALNTALALVVAGGADPSKEDRVLVRSSGDRMQARLDAVFFDYLGARLEGAPREAFQAEVRAQARATFEAEWQGYAVDALFRHRAEARARRTLDIMLARLRTEEMEDDA
SIO_010081: G8E03_RS16945
subclass of: SO_0000673
so part of: G8E03_RS16945
location: 24763..25905
location: region:24763-25905:1
so has part: feature:24763-25905:1:exon

WP_166195462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24763-25905:1:exon

G8E03_RS16950
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16950
old locus tag: G8E03_16970
so part of: sequence
location: 25902..26459
location: region:25902-26459:1
so has part: feature:25902-26459:1:exon
subclass of: SO_0000010

position:25902:1
position: 25902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26459:1
position: 26459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25902-26459:1:exon

G8E03_RS16950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16950
old locus tag: G8E03_16970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDEMDTAGIAREIARRLDRLDPGDAAAARRTSPAQGSPFFWRCHSEFPQIARQPEAWAQIVQILAILTPRGDPLERVTITRDFVPLGRALCDGGNTAWGQDDARAVVSEERLARLLAQQGPLREDALRRVLTGIARRLPPDVAIRAGDVAFAVLAPDRTAHIASEYYKRLDRAERKQTTKEQGV
SIO_010081: G8E03_RS16950
subclass of: SO_0000673
so part of: G8E03_RS16950
location: 25902..26459
location: region:25902-26459:1
so has part: feature:25902-26459:1:exon

WP_166195465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25902-26459:1:exon

G8E03_RS16955
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
gene: cas7e
locus tag: G8E03_RS16955
old locus tag: G8E03_16975
so part of: sequence
location: 26456..27583
location: region:26456-27583:1
so has part: feature:26456-27583:1:exon
subclass of: SO_0000010

position:26456:1
position: 26456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27583:1
position: 27583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26456-27583:1:exon

G8E03_RS16955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
gene: cas7e
locus tag: G8E03_RS16955
old locus tag: G8E03_16975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004274591.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated protein Cas7/Cse4/CasC
translation: MTLRFLQIHTLTGYSAALLNRDDNGLAKRLPYGGAIRTRVSSQCLKRHWRMADDVHSLHTIDGAEAARRSREAVTHEIIAPLTVSHGADIAKAIGDAFQLAVYGDKGHSRTSRQILLLGAPELRWLKSEVERLAGEAGGDAKQAAELAKDWHKAFRANAKAMREATALPGGLTGALFGRMVTSDPEANIAAPVHVAHSFTVHPAESELDFYAAVDDLDPEEGAGNLGETELTSGLYYGYVVIDLAGLLSNLGGDGDMAGQVVHNLIHLIAEVTPGAKLGSTAPYGRAGFMMVEAGDRQPRSLAEAFRVPCKPDLGSAVAALTGQLARFDECYATGEERHAMSLANGDLDGMTRGGLADLARFGAGIAGQGGERQA
SIO_010081: G8E03_RS16955
subclass of: SO_0000673
so part of: G8E03_RS16955
location: 26456..27583
location: region:26456-27583:1
so has part: feature:26456-27583:1:exon

WP_166195468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26456-27583:1:exon

G8E03_RS16960
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
gene: cas5e
locus tag: G8E03_RS16960
old locus tag: G8E03_16980
so part of: sequence
location: 27580..28272
location: region:27580-28272:1
so has part: feature:27580-28272:1:exon
subclass of: SO_0000010

position:27580:1
position: 27580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28272:1
position: 28272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27580-28272:1:exon

G8E03_RS16960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
gene: cas5e
locus tag: G8E03_RS16960
old locus tag: G8E03_16980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010399210.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated protein Cas5/CasD
translation: MTRWLILDLCGPMMAFGGVAVDQVGPVRDFPALSMITGLVANALGLDWRERQAHAQLQSRLVLASVVVEEPERVTDMQNAQLAAADKGWTTRNMPEGRDGGTYGAPHRRARAYLADGRVICVLRLKDMAGPDLDQVKTALQCPARPLFLGRKPCLPSRPVLGGEVAGQTAHEALKAALLAHGITGSLRAQWPMGQGPDDGAQDLADLRNWRTGLHGGRRAVQTGRIGAMA
SIO_010081: G8E03_RS16960
subclass of: SO_0000673
so part of: G8E03_RS16960
location: 27580..28272
location: region:27580-28272:1
so has part: feature:27580-28272:1:exon

WP_166195398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27580-28272:1:exon

G8E03_RS16965
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16965
old locus tag: G8E03_16985
so part of: sequence
location: 28269..29051
location: region:28269-29051:1
so has part: feature:28269-29051:1:exon
subclass of: SO_0000010

position:28269:1
position: 28269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29051:1
position: 29051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28269-29051:1:exon

G8E03_RS16965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16965
old locus tag: G8E03_16985
inference: COORDINATES: protein motif:HMM:NF020377.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated protein Cas6/Cse3/CasE
translation: MSGLHMVHIPLAPHDLARIAGQRGWTRATARDPVGTFDEGVALHHLSVEAFGPGALKPFRLMVAPGGRSAALYGYSHHTADALRGTAHAIAPPEIADLMSPEGLRAKPMPQNWTAGQRVGFDLRVRPVRRLKKAVGGRRPGAEIDVFVHEALSRFDADENGMLTSGRSRAAVYGDWLAERLAGDGIARLEGPAELVSFARERAVRKGRAVEGPAAVLRGTLVIERPAAFADLLHRGIGRHTAYGYGMVLLRAPQEQPIGE
SIO_010081: G8E03_RS16965
subclass of: SO_0000673
so part of: G8E03_RS16965
location: 28269..29051
location: region:28269-29051:1
so has part: feature:28269-29051:1:exon

WP_166195470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28269-29051:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 2758038
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 29115..29143
rpt unit seq: ggctcccccgcacccgcggggatagaccc
so part of: sequence
location: 29115..29448
location: region:29115-29448:1
so has part: feature:29115-29448:1:region

position:29115:1
position: 29115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29448:1
position: 29448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29115-29448:1:region

G8E03_RS16970
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
gene: cas1e
locus tag: G8E03_RS16970
old locus tag: G8E03_16990
so part of: sequence
location: 29628..30506
location: region:29628-30506:1
so has part: feature:29628-30506:1:exon
subclass of: SO_0000010

position:29628:1
position: 29628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30506:1
position: 30506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29628-30506:1:exon

G8E03_RS16970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
gene: cas1e
locus tag: G8E03_RS16970
old locus tag: G8E03_16990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014777589.1
GO function: GO:0004520 - DNA endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated endonuclease Cas1e
translation: MLKGRLGLDSAKVPHADREGLLYLARGALSARSGTLAFLRGEASGADALDTGDYAIPLQGVSMILLGPGSTVSHDALRLLAHARTALAAVGEDGVRLYTAPPLIPDRSGLARVQARLWADDAMRIDIARRMYAWRLGEVLAHRDMDGLRGIEGARMKQSYRLIADQVGVRWEGRRYERGNPGSADLPNQALNHASSAVEAAAAIAVAATATIPQLGFIHEDPGQSFVLDIADLWRVEVTIPTAFRAAKQAAERPSENIERLARRMTGDVLARRKVIPEMIGQIKTLIAGEGA
SIO_010081: G8E03_RS16970
subclass of: SO_0000673
so part of: G8E03_RS16970
location: 29628..30506
location: region:29628-30506:1
so has part: feature:29628-30506:1:exon

WP_166195473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29628-30506:1:exon

G8E03_RS16975
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
gene: cas2e
locus tag: G8E03_RS16975
old locus tag: G8E03_16995
so part of: sequence
location: 30508..30801
location: region:30508-30801:1
so has part: feature:30508-30801:1:exon
subclass of: SO_0000010

position:30508:1
position: 30508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30801:1
position: 30801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30508-30801:1:exon

G8E03_RS16975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
gene: cas2e
locus tag: G8E03_RS16975
old locus tag: G8E03_16995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012179881.1
GO function: GO:0004521 - RNA endonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-E CRISPR-associated endoribonuclease Cas2e
translation: MPLAMIVTSNVQDRYRGFLTSVMLEIAPGTYVSPRMSAGVRTRVWSVMESWWEVLQTGSLVLVWADRQAPGGLRIETLGLPKKTIVDADGVLLVKRE
SIO_010081: G8E03_RS16975
subclass of: SO_0000673
so part of: G8E03_RS16975
location: 30508..30801
location: region:30508-30801:1
so has part: feature:30508-30801:1:exon

WP_166195476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30508-30801:1:exon

G8E03_RS17630
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS17630
so part of: sequence
location: complement(32086..32214)
location: region:32086-32214:-1
so has part: feature:32086-32214:-1:exon
subclass of: SO_0000010

position:32086:-1
position: 32086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32214:-1
position: 32214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32086-32214:-1:exon

G8E03_RS17630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS17630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQELEMDARDGPFADVEGLKKRARLDVGSLRRPARRAQLADI
SIO_010081: G8E03_RS17630
subclass of: SO_0000673
so part of: G8E03_RS17630
location: complement(32086..32214)
location: region:32086-32214:-1
so has part: feature:32086-32214:-1:exon

WP_283811456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32086-32214:-1:exon

G8E03_RS16980
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16980
old locus tag: G8E03_17000
pseudo: true
so part of: sequence
location: complement(<32244..32618)
location: region:32244-32618:-1
so has part: feature:32244-32618:-1:exon
subclass of: SO_0000010

position:32244:-1
position: 32244
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:32618:-1
position: 32618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32244-32618:-1:exon

G8E03_RS16980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16980
old locus tag: G8E03_17000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: G8E03_RS16980
subclass of: SO_0000673
so part of: G8E03_RS16980
location: complement(<32244..32618)
location: region:32244-32618:-1
so has part: feature:32244-32618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32244-32618:-1:exon

G8E03_RS16985
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS16985
old locus tag: G8E03_17005
so part of: sequence
location: 32830..33477
location: region:32830-33477:1
so has part: feature:32830-33477:1:exon
subclass of: SO_0000010

position:32830:1
position: 32830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33477:1
position: 33477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32830-33477:1:exon

G8E03_RS16985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS16985
old locus tag: G8E03_17005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015673650.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione binding-like protein
translation: MLEIWGRRSSSNVQALMWCVGELALPHVRHDAGGRYGVTETDAFAALNPNRTVPVLQDADGPAIWETGAILRYLANRYGSTSFWPDDPVERAEVDKWAEWAKINVAMGFTVPVFWRVVRTPETERDPAAIAAALRALHDILAIAETRIEKTGWLAGSSFTLADIQFGHILFRYFDIDIERPNWSSLKGYFDRLMLRPAFREHVAISYDELRAHPR
SIO_010081: G8E03_RS16985
subclass of: SO_0000673
so part of: G8E03_RS16985
location: 32830..33477
location: region:32830-33477:1
so has part: feature:32830-33477:1:exon

WP_166195479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32830-33477:1:exon