Pontibrevibacter nitratireducens strain ALG8 plasmid unnamed1, complete sequence.
type: Entry
definition: Pontibrevibacter nitratireducens strain ALG8 plasmid unnamed1, complete sequence.
sequence version: NZ_CP049812.1
sequence date: 2023-05-27
sequence: sequence
division: CON
label: NZ_CP049812.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN14278080
keyword: RefSeq
source: Pontibrevibacter nitratireducens
organism: Pontibrevibacter nitratireducens
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Pontibrevibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP049812.1.\nBacteria and source DNA available from Cong Sun.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. DEC-2019\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Oxford Nanopore; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/27/2023 03:21:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,480\nCDSs (total) :: 3,427\nGenes (coding) :: 3,361\nCDSs (with protein) :: 3,361\nGenes (RNA) :: 53\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 3\nPseudo Genes (total) :: 66\nCDSs (without protein) :: 66\nPseudo Genes (ambiguous residues) :: 0 of 66\nPseudo Genes (frameshifted) :: 45 of 66\nPseudo Genes (incomplete) :: 41 of 66\nPseudo Genes (internal stop) :: 12 of 66\nPseudo Genes (multiple problems) :: 24 of 66\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 12229
topology: circular
so has quality: SO_0000988
location: 1..12229
location: region:1-12229:1
RO_0002162: 2758038

NZ_CP049812
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN14278080
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Monaibacterium sp. ALG8 with diverse plasmids
author: Sun, C.
journal: Unpublished

2
title: Direct Submission
author: Sun, C.
journal: Submitted (04-MAR-2020) College of Life Science, Zhejiang Sci-Tech University, 928 No.2 Avenue, Xiasha Higher Education Zone, HangZhou 310018, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12229:1
position: 12229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12229:1:source
so part of: sequence
organism: Pontibrevibacter nitratireducens
mol type: genomic DNA
strain: ALG8
isolation source: seawater in intertidal zone
plasmid: unnamed1
country: China: zhoushan
lat lon: 30.02 N 122.34 E
collection date: 2018-09

2758038
type: Taxonomy
SIO_000068: taxonomy

G8E03_RS15040
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS15040
old locus tag: G8E03_15060
pseudo: true
so part of: sequence
location: complement(join(11625..12229,1..39))
location: region:1-12229:-1
so has part: feature:1-39:-1:exon
so has part: feature:11625-12229:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12229:-1
position: 12229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-39:-1:exon

position:39:-1
position: 39
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11625-12229:-1:exon

position:11625:-1
position: 11625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

G8E03_RS15040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS15040
old locus tag: G8E03_15060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007604758.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
SIO_010081: G8E03_RS15040
subclass of: SO_0000673
so part of: G8E03_RS15040
location: complement(join(11625..12229,1..39))
location: region:1-12229:-1
so has part: feature:1-39:-1:exon
so has part: feature:11625-12229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-39:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11625-12229:-1:exon

G8E03_RS14955
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS14955
old locus tag: G8E03_14975
so part of: sequence
location: 112..528
location: region:112-528:1
so has part: feature:112-528:1:exon
subclass of: SO_0000010

position:112:1
position: 112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528:1
position: 528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112-528:1:exon

G8E03_RS14955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS14955
old locus tag: G8E03_14975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011974795.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MFSIGELSKRAKVKIPTIRYYEEVGLLAAPERTEGNQRRYDASGLERLSFIKHARDLGFSIEAISQLIELQGHPDRSCQVAKEIVVSQLSNVRAKIKRLRALEKELVRISKGCDGEGVSEECYVLASLADHLLCRYEH
SIO_010081: G8E03_RS14955
subclass of: SO_0000673
so part of: G8E03_RS14955
location: 112..528
location: region:112-528:1
so has part: feature:112-528:1:exon

WP_166194387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112-528:1:exon

G8E03_RS14960
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS14960
old locus tag: G8E03_14980
so part of: sequence
location: 625..957
location: region:625-957:1
so has part: feature:625-957:1:exon
subclass of: SO_0000010

position:625:1
position: 625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957:1
position: 957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625-957:1:exon

G8E03_RS14960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS14960
old locus tag: G8E03_14980
inference: COORDINATES: protein motif:HMM:NF019460.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1636 family protein
translation: MSDPVLLHICQGCDGGQLAELRAAIDRAFTKGRVQIVEQQCMNGCAKPVSFGLQSPGRATCFFAGVDPQSDIADIVATLHAYLKAPRGWIEDARPCGRLRFCLVGRVPAL
SIO_010081: G8E03_RS14960
subclass of: SO_0000673
so part of: G8E03_RS14960
location: 625..957
location: region:625-957:1
so has part: feature:625-957:1:exon

WP_166194390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625-957:1:exon

G8E03_RS14965
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS14965
old locus tag: G8E03_14985
so part of: sequence
location: complement(954..1451)
location: region:954-1451:-1
so has part: feature:954-1451:-1:exon
subclass of: SO_0000010

position:954:-1
position: 954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451:-1
position: 1451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954-1451:-1:exon

G8E03_RS14965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS14965
old locus tag: G8E03_14985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005981976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDRSLPLLIIGLVFGGGIGFTVAAANGITLGGHDHADPAHHGNHALADTAGSHDHSTLLSMAADASAPSLAVHAMRDPASGWNLHVITENFTFSPQNASRDHVPGEGHAHVYINGVKLGRFYGPWVHLDNLPEGEVTVEVTLNANDHRPLAVSGVPLAEIVRIVN
SIO_010081: G8E03_RS14965
subclass of: SO_0000673
so part of: G8E03_RS14965
location: complement(954..1451)
location: region:954-1451:-1
so has part: feature:954-1451:-1:exon

WP_166194393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:954-1451:-1:exon

G8E03_RS14970
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS14970
old locus tag: G8E03_14990
so part of: sequence
location: complement(1529..2230)
location: region:1529-2230:-1
so has part: feature:1529-2230:-1:exon
subclass of: SO_0000010

position:1529:-1
position: 1529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230:-1
position: 2230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529-2230:-1:exon

G8E03_RS14970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS14970
old locus tag: G8E03_14990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005625664.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CbtA family protein
translation: MFTRLLTSALFAGAAAGLIAALLQLYFVQPVLLHAELYEGGDLVHFGSESANSAHPELPGFDAVRDGLSIIFTMLIYSGYAMVLVALMALAQTRGAVINARTGLIWGIAGFVAIHFAPGFTLAPEVPGVAAADVFVRQIWWYATVIAAAIAMWLIAFGGNWAAWGVAIVLLLVPHVIGAPEPDVFTGPVPTEIGALFAARAYGVGMMAWVMLGGFAGYFWSREEATANQAQTA
SIO_010081: G8E03_RS14970
subclass of: SO_0000673
so part of: G8E03_RS14970
location: complement(1529..2230)
location: region:1529-2230:-1
so has part: feature:1529-2230:-1:exon

WP_166194432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1529-2230:-1:exon

G8E03_RS14975
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS14975
old locus tag: G8E03_14995
so part of: sequence
location: complement(2235..2411)
location: region:2235-2411:-1
so has part: feature:2235-2411:-1:exon
subclass of: SO_0000010

position:2235:-1
position: 2235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2411:-1
position: 2411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2235-2411:-1:exon

G8E03_RS14975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS14975
old locus tag: G8E03_14995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005981986.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CbtB domain-containing protein
translation: MNAQSATGAQATPATSIGAMIAVALIGLGITFVAGHVQAETLHDAAHDVRHATGFPCH
SIO_010081: G8E03_RS14975
subclass of: SO_0000673
so part of: G8E03_RS14975
location: complement(2235..2411)
location: region:2235-2411:-1
so has part: feature:2235-2411:-1:exon

WP_166194395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2235-2411:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 2758038
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: complement(2444..2649)
location: region:2444-2649:-1
so has part: feature:2444-2649:-1:region

position:2444:-1
position: 2444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2649:-1
position: 2649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2444-2649:-1:region

G8E03_RS14980
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
gene: mobQ
locus tag: G8E03_RS14980
old locus tag: G8E03_15000
so part of: sequence
location: complement(2728..3996)
location: region:2728-3996:-1
so has part: feature:2728-3996:-1:exon
subclass of: SO_0000010

position:2728:-1
position: 2728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3996:-1
position: 3996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2728-3996:-1:exon

G8E03_RS14980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
gene: mobQ
locus tag: G8E03_RS14980
old locus tag: G8E03_15000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655527.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MASYHLSVKTIKRSAGRSATAAGAYRAGERIECQREGRVHDYTAKRGIEKTFILTPKDAPSWAQDRSALWNAAEENETRRNSVTAREWELALPSEISAEDRSQITRQFAEELVSRYGVAVDVAIHAPHREGDQRNHHAHVLTSTRKLEPEGFTTKTRVLDSAKTGGAEIEQMRGLWAELQNRALQRAGEVERVDHRSLEAQREEALSQGDALKAEELNRDPEVKLGPAANAMERREMRTAERDGRDYEPVTERGRAVHAARQARALFAEMRQRLELARDTYGAERDAGQGRVSAGLAALRAAASKDRSADRGDGDIRDRLARIVGREEHEAGGQSVEEPSDLRRVNDRLRETLGRSEEAQADRGDDGEAKPSIRERLEGVLNKPRETLDRGDDRDAERDRGDEKENTREIDREIDRDPGLSH
SIO_010081: G8E03_RS14980
subclass of: SO_0000673
so part of: G8E03_RS14980
location: complement(2728..3996)
location: region:2728-3996:-1
so has part: feature:2728-3996:-1:exon

WP_166194398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2728-3996:-1:exon

G8E03_RS14985
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS14985
old locus tag: G8E03_15005
so part of: sequence
location: 4825..5124
location: region:4825-5124:1
so has part: feature:4825-5124:1:exon
subclass of: SO_0000010

position:4825:1
position: 4825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5124:1
position: 5124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4825-5124:1:exon

G8E03_RS14985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS14985
old locus tag: G8E03_15005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009824541.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mobilization protein
translation: MAETELERAEKRYAQAKARLQALRNREATRQRKLDTRRKVILGGALMDLAERDSGAAAMVERLVRNLSRDQDRKAFAEWGGPSSGDETPSPTSDPDGAD
SIO_010081: G8E03_RS14985
subclass of: SO_0000673
so part of: G8E03_RS14985
location: 4825..5124
location: region:4825-5124:1
so has part: feature:4825-5124:1:exon

WP_166194401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4825-5124:1:exon

G8E03_RS14990
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS14990
old locus tag: G8E03_15010
pseudo: true
so part of: sequence
location: 5124..6802
location: region:5124-6802:1
so has part: feature:5124-6802:1:exon
subclass of: SO_0000010

position:6802:1
position: 6802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5124-6802:1:exon

G8E03_RS14990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS14990
old locus tag: G8E03_15010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503751.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
SIO_010081: G8E03_RS14990
subclass of: SO_0000673
so part of: G8E03_RS14990
location: 5124..6802
location: region:5124-6802:1
so has part: feature:5124-6802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5124-6802:1:exon

G8E03_RS14995
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS14995
old locus tag: G8E03_15015
so part of: sequence
location: 6821..7372
location: region:6821-7372:1
so has part: feature:6821-7372:1:exon
subclass of: SO_0000010

position:6821:1
position: 6821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7372:1
position: 7372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6821-7372:1:exon

G8E03_RS14995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS14995
old locus tag: G8E03_15015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009804243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDHTPSPAPLSDEELRETLDMLGTVVASVSDRVDNQTDAMNGLIKTATEARQAAFAARTQTNPENYGALVGETIDGRINDNLVRMAGMINDLYTASNRAQEALKKADESKWETFREIRERENAISRFKSRLPWFGLGAVVLALAMTVLLPRFLAGNATTCAVLGASWTATTTGVDACVFYQR
SIO_010081: G8E03_RS14995
subclass of: SO_0000673
so part of: G8E03_RS14995
location: 6821..7372
location: region:6821-7372:1
so has part: feature:6821-7372:1:exon

WP_166194403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6821-7372:1:exon

G8E03_RS15000
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS15000
old locus tag: G8E03_15020
so part of: sequence
location: 7638..8723
location: region:7638-8723:1
so has part: feature:7638-8723:1:exon
subclass of: SO_0000010

position:7638:1
position: 7638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8723:1
position: 8723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7638-8723:1:exon

G8E03_RS15000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS15000
old locus tag: G8E03_15020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MVGETTKPDRTPLLPLRHAQGDFFVCDIFDAAPKGDMASMAHPIFTLSTKPDTKKRRYVAADGQSYVEIRPNMIGLATVHDRDVLIYCISQVVAALNDGKQIHRTLRFKAYDLLVATNRPTAGTGYTGLKAALERLQGTQIETNITTGGVEQIDGFSLIDRYRIVRETRDGRMLDLEVTLSDWVFNAIAGDDVLTLNRRYFQLRKPLERRLYELARKQCGTQPEWKCGLDKLKARTGSTSSDKEFRRLVRAICKADEEHNHMPDYAFRLDADILTVTPKPEFLENYAPKPDQDRVTGGYILPLSPDTLEQARELAPTWDINVLAAEWRSYAAKQQEAPKNPDAAFLGFCKSWFKKRGRNGW
SIO_010081: G8E03_RS15000
subclass of: SO_0000673
so part of: G8E03_RS15000
location: 7638..8723
location: region:7638-8723:1
so has part: feature:7638-8723:1:exon

WP_166194406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7638-8723:1:exon

G8E03_RS15005
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS15005
old locus tag: G8E03_15025
so part of: sequence
location: complement(8741..8953)
location: region:8741-8953:-1
so has part: feature:8741-8953:-1:exon
subclass of: SO_0000010

position:8741:-1
position: 8741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8953:-1
position: 8953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8741-8953:-1:exon

G8E03_RS15005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS15005
old locus tag: G8E03_15025
inference: COORDINATES: protein motif:HMM:NF020835.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MGLSAKRPSRGDEARQRILQEVTETPSEKKKRLNAEIEESLYKRIKMKSVEEGRSISDITRDLWSEYLSK
SIO_010081: G8E03_RS15005
subclass of: SO_0000673
so part of: G8E03_RS15005
location: complement(8741..8953)
location: region:8741-8953:-1
so has part: feature:8741-8953:-1:exon

WP_166194409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8741-8953:-1:exon

G8E03_RS15010
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
gene: parA
locus tag: G8E03_RS15010
old locus tag: G8E03_15030
so part of: sequence
location: complement(8953..9603)
location: region:8953-9603:-1
so has part: feature:8953-9603:-1:exon
subclass of: SO_0000010

position:9603:-1
position: 9603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8953-9603:-1:exon

G8E03_RS15010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
gene: parA
locus tag: G8E03_RS15010
old locus tag: G8E03_15030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MSIISVLNPKGGCGKTTISTNLARALHDRGHSVLIVDSDPQGSARDWHAASEDNPLELVALDRPNNVKTLRSMAANYDYVVIDGAAKLEDMIAAAIKVSDFILIPVQPSPYDIWAASDLVDFIKARQEVTDGVPLAGFIVSRVVEGTRLGGDVRAALDEYALPVFETTITQRQVYPQTASEGLTVFDADNAKAKAETTALLDEVLAMIAPTAREVA
SIO_010081: G8E03_RS15010
subclass of: SO_0000673
so part of: G8E03_RS15010
location: complement(8953..9603)
location: region:8953-9603:-1
so has part: feature:8953-9603:-1:exon

WP_166194412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8953-9603:-1:exon

G8E03_RS15015
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS15015
old locus tag: G8E03_15035
so part of: sequence
location: complement(9666..9956)
location: region:9666-9956:-1
so has part: feature:9666-9956:-1:exon
subclass of: SO_0000010

position:9666:-1
position: 9666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9956:-1
position: 9956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9666-9956:-1:exon

G8E03_RS15015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS15015
old locus tag: G8E03_15035
inference: COORDINATES: protein motif:HMM:NF016876.2
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MANSYDLSKKAKDDLRGIWDYSEDRWGEQQADVYYRDIFKTIERLVSGELKGRKADVRAGYLKYPVGRHFLYFTKVEGRINIVRVLHQRMEVTRHL
SIO_010081: G8E03_RS15015
subclass of: SO_0000673
so part of: G8E03_RS15015
location: complement(9666..9956)
location: region:9666-9956:-1
so has part: feature:9666-9956:-1:exon

WP_166194415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9666-9956:-1:exon

G8E03_RS15020
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS15020
old locus tag: G8E03_15040
so part of: sequence
location: complement(9949..10200)
location: region:9949-10200:-1
so has part: feature:9949-10200:-1:exon
subclass of: SO_0000010

position:9949:-1
position: 9949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10200:-1
position: 10200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9949-10200:-1:exon

G8E03_RS15020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS15020
old locus tag: G8E03_15040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004122578.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MARNTSMSLGDHFASFIDTQVQTGRYGSASDVVRAGLRLLEEHETKVKALQDALIEGEQSGIAEDFDSEAFLNEIKASRGLHG
SIO_010081: G8E03_RS15020
subclass of: SO_0000673
so part of: G8E03_RS15020
location: complement(9949..10200)
location: region:9949-10200:-1
so has part: feature:9949-10200:-1:exon

WP_166194418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9949-10200:-1:exon

G8E03_RS15025
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS15025
old locus tag: G8E03_15045
so part of: sequence
location: 10342..10551
location: region:10342-10551:1
so has part: feature:10342-10551:1:exon
subclass of: SO_0000010

position:10342:1
position: 10342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10551:1
position: 10551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10342-10551:1:exon

G8E03_RS15025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS15025
old locus tag: G8E03_15045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120600.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MNLRELVAQNIIDHRKRLGVSQENLARYAGISRSHLGKIENARYSASLDTLEKISRALGVKGAALFEPR
SIO_010081: G8E03_RS15025
subclass of: SO_0000673
so part of: G8E03_RS15025
location: 10342..10551
location: region:10342-10551:1
so has part: feature:10342-10551:1:exon

WP_166194421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10342-10551:1:exon

G8E03_RS15030
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS15030
old locus tag: G8E03_15050
so part of: sequence
location: complement(10618..10872)
location: region:10618-10872:-1
so has part: feature:10618-10872:-1:exon
subclass of: SO_0000010

position:10618:-1
position: 10618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10872:-1
position: 10872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10618-10872:-1:exon

G8E03_RS15030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS15030
old locus tag: G8E03_15050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503743.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MQQLEMFPDDIRIERVDPEANMYRFYRMRLLPDLFGGVSLLREWGRIGTQGRHRIELFEDAGHAADAMLDLYRAKKKRGYQLAG
SIO_010081: G8E03_RS15030
subclass of: SO_0000673
so part of: G8E03_RS15030
location: complement(10618..10872)
location: region:10618-10872:-1
so has part: feature:10618-10872:-1:exon

WP_166194423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10618-10872:-1:exon

G8E03_RS15035
type: Gene
subclass of: SO_0000704
RO_0002162: 2758038
locus tag: G8E03_RS15035
old locus tag: G8E03_15055
so part of: sequence
location: complement(10859..11425)
location: region:10859-11425:-1
so has part: feature:10859-11425:-1:exon
subclass of: SO_0000010

position:10859:-1
position: 10859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11425:-1
position: 11425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10859-11425:-1:exon

G8E03_RS15035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2758038
locus tag: G8E03_RS15035
old locus tag: G8E03_15055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187377.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MNLGYARVSTNDQATAAQLDALNVAGCERVFEEHASGGRWDRPELHRMLDQLRKGDVVIVWKLDRLSRSLKDLLAIMEKIDAAGAGFRSLTESIDTTTPAGRMMMQMVGVFAEFEREMIRERTRAGLERARKKGRHPGRKPKLTGDQRQEIRDMVLSGKRTEAEAARLFNVHRSTISRVMREASDATA
SIO_010081: G8E03_RS15035
subclass of: SO_0000673
so part of: G8E03_RS15035
location: complement(10859..11425)
location: region:10859-11425:-1
so has part: feature:10859-11425:-1:exon

WP_166194426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10859-11425:-1:exon