Borrelia puertoricensis strain SUM plasmid lp57, complete sequence.
type: Entry
definition: Borrelia puertoricensis strain SUM plasmid lp57, complete sequence.
sequence version: NZ_CP075400.1
sequence date: 2022-05-23
sequence: sequence
division: CON
label: NZ_CP075400.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN19000909
keyword: RefSeq
source: Borrelia puertoricensis
organism: Borrelia puertoricensis
taxonomy: Bacteria; Spirochaetes; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP075400.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1138.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/23/2022 17:07:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.1\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 1,976\nCDSs (total) :: 1,938\nGenes (coding) :: 1,830\nCDSs (with protein) :: 1,830\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 108\nCDSs (without protein) :: 108\nPseudo Genes (ambiguous residues) :: 0 of 108\nPseudo Genes (frameshifted) :: 72 of 108\nPseudo Genes (incomplete) :: 37 of 108\nPseudo Genes (internal stop) :: 24 of 108\nPseudo Genes (multiple problems) :: 23 of 108\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 56673
topology: linear
so has quality: SO_0000987
location: 1..56673
location: region:1-56673:1
RO_0002162: 2756107

NZ_CP075400
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN19000909
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Kneubehl, A.R.
author: Lopez, J.
journal: Submitted (17-MAY-2021) Pediatrics-Tropical Medicine, Baylor College of Medicine, 1102 Bates Ave, Houston, TX 77030, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56673:1
position: 56673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-56673:1:source
so part of: sequence
organism: Borrelia puertoricensis
mol type: genomic DNA
strain: SUM
isolation source: tick
host: Alectorobius puertoricensis
type material: type strain of Borrelia puertoricensis
plasmid: lp57
country: Panama
collection date: 2019-01-01

2756107
type: Taxonomy
SIO_000068: taxonomy

bpuSUM_RS09285
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09285
old locus tag: bpuSUM_001856
so part of: sequence
location: complement(66..656)
location: region:66-656:-1
so has part: feature:66-656:-1:exon
subclass of: SO_0000010

position:66:-1
position: 66
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656:-1
position: 656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66-656:-1:exon

bpuSUM_RS09285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09285
old locus tag: bpuSUM_001856
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012537734.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MREKINFIYRIVFIFCIICFVSCELFKNSDNKGDLFQNLGHVNLKSDWRDNLKLNKEEFDTLTFFVNALKNELPKGGSSHFDIYLQGDVSKIEGYIKRFLLKLNDKGKVKELLKHIKYGKDNPLNIEGRDEKLNIDAKDYYKIEKRLTDVFDNYFMFLNPPSSPSGPPPLIENDPEEKVFESIKKVCYEHRHRNKN
SIO_010081: bpuSUM_RS09285
subclass of: SO_0000673
so part of: bpuSUM_RS09285
location: complement(66..656)
location: region:66-656:-1
so has part: feature:66-656:-1:exon

WP_247067731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66-656:-1:exon

bpuSUM_RS09290
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: thyX
locus tag: bpuSUM_RS09290
old locus tag: bpuSUM_001857
so part of: sequence
location: complement(745..1569)
location: region:745-1569:-1
so has part: feature:745-1569:-1:exon
subclass of: SO_0000010

position:745:-1
position: 745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569:-1
position: 1569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745-1569:-1:exon

bpuSUM_RS09290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: thyX
locus tag: bpuSUM_RS09290
old locus tag: bpuSUM_001857
EC number: 2.1.1.148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012537731.1
GO function: GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent thymidylate synthase
translation: MNTDIEREDLLNKEYKVLDKGFIKLVDYMGSEERILNAARISYRGERIRRTDAELIDYLVRNEHTSPFEQVVFTFYIKAPIFVARQWMRHRTARINEVSGSYSFLREEFYVPLEEDLKIQNIESNQIEANFAKNVLSDLRESQKTCYKLYQDMINSNVSKEVSRIALPLSLYTEWYWQIDLNNLFHFIKLRLALNESKEVSENSSKEMSEYAKILLDVIEKLVPIATKSFKNHILKGCRLSYEEIIAISGALNISKLKLDDKALNRLKDKLNIK
SIO_010081: bpuSUM_RS09290
subclass of: SO_0000673
so part of: bpuSUM_RS09290
location: complement(745..1569)
location: region:745-1569:-1
so has part: feature:745-1569:-1:exon

WP_247068007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:745-1569:-1:exon

bpuSUM_RS09295
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09295
old locus tag: bpuSUM_001858
so part of: sequence
location: complement(1730..2617)
location: region:1730-2617:-1
so has part: feature:1730-2617:-1:exon
subclass of: SO_0000010

position:1730:-1
position: 1730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2617:-1
position: 2617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730-2617:-1:exon

bpuSUM_RS09295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09295
old locus tag: bpuSUM_001858
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P12 family lipoprotein
translation: MKRNILSVCMLALLCLLSCDMNALNDLLNEVREKVLDESKDNKYLNHEQGNQEQKEVVIDSLEEGVEIQQDMEVKPVNAGFEVFRQEYPYYPQEEVIKIEEKDLVPSTESEKEAQAEIEKVKGALGDSGFQQLIKNALELKDRCERGRADFYDIMGKIQSERISLTKKRKENIEKIRKLTQLQNKLNDERSNLERLMNEVEVGLNERSSAKYFFEDSEKILKEAITDRLRNNKRRSYWSRRGNGDFLARKARSNAESSLEQLESSSVKLIEAMAKIKEIEELISEAKSALGNLSR
SIO_010081: bpuSUM_RS09295
subclass of: SO_0000673
so part of: bpuSUM_RS09295
location: complement(1730..2617)
location: region:1730-2617:-1
so has part: feature:1730-2617:-1:exon

WP_247068000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1730-2617:-1:exon

bpuSUM_RS09300
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09300
old locus tag: bpuSUM_001859
pseudo: true
so part of: sequence
location: complement(3568..4636)
location: region:3568-4636:-1
so has part: feature:3568-4636:-1:exon
subclass of: SO_0000010

position:3568:-1
position: 3568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4636:-1
position: 4636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3568-4636:-1:exon

bpuSUM_RS09300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09300
old locus tag: bpuSUM_001859
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633313.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09300
subclass of: SO_0000673
so part of: bpuSUM_RS09300
location: complement(3568..4636)
location: region:3568-4636:-1
so has part: feature:3568-4636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3568-4636:-1:exon

bpuSUM_RS09305
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09305
old locus tag: bpuSUM_001860
so part of: sequence
location: complement(4761..5816)
location: region:4761-5816:-1
so has part: feature:4761-5816:-1:exon
subclass of: SO_0000010

position:4761:-1
position: 4761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5816:-1
position: 5816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4761-5816:-1:exon

bpuSUM_RS09305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09305
old locus tag: bpuSUM_001860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKRITLCALFLTLFLLLGCGSGTTKMEDPQSRFLKSVISLGNDFLNVFTSLSDMVGGVLGFNTTTKKSDVGNYFKTMHDTLSSTKTSLEKIVADMKSDNNPNAEATDTAVKSLITNTLDQIIQGAKTASEAIGTDSNDLLGNVAAQNNGGAAGSEVDKLVKGIKSIVDVVLGEKKGNSDAGDDKKASDGSTARTAAAGDGESGKLFATGAGAVGDVNNSKKVAADAAKAVGAVTGADILQAMIKDDGDAVKLATSQNAGAAPKDATIAGGIALRAMAKNGKFAGPSAAADDAVTAVKGAAISAVTKALDTLTIAIRNTIDSGLKTIKDAMNINPTDTTLTNDNQASEAKKN
SIO_010081: bpuSUM_RS09305
subclass of: SO_0000673
so part of: bpuSUM_RS09305
location: complement(4761..5816)
location: region:4761-5816:-1
so has part: feature:4761-5816:-1:exon

WP_247067998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4761-5816:-1:exon

bpuSUM_RS09310
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09310
old locus tag: bpuSUM_001861
so part of: sequence
location: complement(5946..6983)
location: region:5946-6983:-1
so has part: feature:5946-6983:-1:exon
subclass of: SO_0000010

position:5946:-1
position: 5946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6983:-1
position: 6983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5946-6983:-1:exon

bpuSUM_RS09310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09310
old locus tag: bpuSUM_001861
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MYFFYFFIILLSCGSGTTSAEDPKTTFLNSIANLGKGFLDVFTSLSDMITGAFGIKAETKKSDIGNYFTSIEKAMNTVKEKLQDQVEKNGNYLKIKEVVDNFITNTLDKIADGAKTAATGATGNDAIGNATSAGHGATPADKDSVISLVKGIKTIVDLVLKDKGDAGATKTGEDDKKDVGNLFADANGKDDAKEENIAKASASIGSVTGADILQAIAKSTENPTANSTDGIEKATDAAEIAIAPAVNGKKEIKDAAKKDAVIAAGIALRAMAKDGKFAAKNEAKSAHAVNGATASAVGKTLSTLIIAIRNTVDSGLKTISDALATVTQEDKSVDSTTPAETAIGR
SIO_010081: bpuSUM_RS09310
subclass of: SO_0000673
so part of: bpuSUM_RS09310
location: complement(5946..6983)
location: region:5946-6983:-1
so has part: feature:5946-6983:-1:exon

WP_247068111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5946-6983:-1:exon

bpuSUM_RS09315
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09315
old locus tag: bpuSUM_001862
so part of: sequence
location: complement(7114..7752)
location: region:7114-7752:-1
so has part: feature:7114-7752:-1:exon
subclass of: SO_0000010

position:7114:-1
position: 7114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7752:-1
position: 7752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7114-7752:-1:exon

bpuSUM_RS09315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09315
old locus tag: bpuSUM_001862
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MMKRITLCALLMTLFLLLSCNNSGKNLKDDEVAKSDGSVIDLAKITKNITDSVAFAKDVKEVHSLVKSIDDLAKAIGAKIKDSYELDTTNSGHNGALLAGVFQVILTVETKLKSLKQSAKLPESLKAKVTAAEQSSKKFLDKLKGENAALGKEDASDADAKKAIDKNDNTGGKGKEELGELNTAIDALLTAADAAVTASINELTTSSKPANT
SIO_010081: bpuSUM_RS09315
subclass of: SO_0000673
so part of: bpuSUM_RS09315
location: complement(7114..7752)
location: region:7114-7752:-1
so has part: feature:7114-7752:-1:exon

WP_247068113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7114-7752:-1:exon

bpuSUM_RS09320
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09320
old locus tag: bpuSUM_001863
so part of: sequence
location: complement(7874..8905)
location: region:7874-8905:-1
so has part: feature:7874-8905:-1:exon
subclass of: SO_0000010

position:7874:-1
position: 7874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8905:-1
position: 8905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7874-8905:-1:exon

bpuSUM_RS09320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09320
old locus tag: bpuSUM_001863
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MDYLFLLLGCGSGTTKMEDPKTTFLTSIANLGKGFLDVFTSLSDMITGALGINAETKKEDIGKYFTSIENTMTSVKKKLNTVVAENGKYQKIKEVVDTFITNTLDKIADGAKEAAKGATGDVIGNATATGHGATPASKDSVVSLVKGIKTIVEVVLKKDEGDAGANKTGDDKKDVGNLFINDAGKDGSKEENIAKASASIGAVTGADILQAIANSKEDPQVDNANGIEKAKDAAEIAIVPAVNKTEIKEDSAKKDAVIAAGIALRAMAKDGKFAAKNEEKSANAVNGIAANAVGKTLRTLIIAIRNTVDSGLKTISDALATVTQEDKSLDSTTPADSATGSQQ
SIO_010081: bpuSUM_RS09320
subclass of: SO_0000673
so part of: bpuSUM_RS09320
location: complement(7874..8905)
location: region:7874-8905:-1
so has part: feature:7874-8905:-1:exon

WP_247068223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7874-8905:-1:exon

bpuSUM_RS09325
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09325
old locus tag: bpuSUM_001864
so part of: sequence
location: complement(9149..9784)
location: region:9149-9784:-1
so has part: feature:9149-9784:-1:exon
subclass of: SO_0000010

position:9149:-1
position: 9149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9784:-1
position: 9784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9149-9784:-1:exon

bpuSUM_RS09325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09325
old locus tag: bpuSUM_001864
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633323.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MMKRITLCALFLTLFLLSSCNSSGAATKDGQAAKSDGTVIDLAKITKNITDSVAFAKDVKEIHSLVKSIDELAKAIGKKIKNDGTLENETDKNGSLLAGVHSVISAVKTKVEALETTSGISTELKTKITDVKSKAEAFLGKLKDKHADLGKNAATDVDAKSAILTTDATKDKGAKELGELNTAINELLTAANGAATAAIAELTTSAKPSNT
SIO_010081: bpuSUM_RS09325
subclass of: SO_0000673
so part of: bpuSUM_RS09325
location: complement(9149..9784)
location: region:9149-9784:-1
so has part: feature:9149-9784:-1:exon

WP_247068286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9149-9784:-1:exon

bpuSUM_RS09330
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09330
old locus tag: bpuSUM_001865
so part of: sequence
location: complement(9904..10998)
location: region:9904-10998:-1
so has part: feature:9904-10998:-1:exon
subclass of: SO_0000010

position:9904:-1
position: 9904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10998:-1
position: 10998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9904-10998:-1:exon

bpuSUM_RS09330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09330
old locus tag: bpuSUM_001865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539475.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALLMTLFLLLSCGSGQLQAEKLAAESKNTFLDSLVKIGHGFYEIFGIFGNAIGDTLGLTEVKSGDNKSKIGEHFKTIGNGLTTTKDKLKELSNKISEAKNADESTIKLVEDAIKGANDIFEQLITALTKLAGVTNDSAVIGDNADNPPAAAEKAGIDAIISGVKDIIGVAVKSDVNIEAGNAGNQIATANAATDAIAVLGGHTAKATAGAGPKLAAEVAKADSWAMIDKIKNAKATNGIQLDAGEKDAGTLAASNNNASANAGAKSNADLAAAVAFKAMTKGGKFSAANDDSEAVKAAAVSAVNKVLGVLDLIIRKTVASNLDKVGKAVKGIQYFKTTTEATEASTTQPTVTAITK
SIO_010081: bpuSUM_RS09330
subclass of: SO_0000673
so part of: bpuSUM_RS09330
location: complement(9904..10998)
location: region:9904-10998:-1
so has part: feature:9904-10998:-1:exon

WP_247068288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9904-10998:-1:exon

bpuSUM_RS09335
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09335
old locus tag: bpuSUM_001866
pseudo: true
so part of: sequence
location: complement(11114..>12103)
location: region:11114-12103:-1
so has part: feature:11114-12103:-1:exon
subclass of: SO_0000010

position:11114:-1
position: 11114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12103:-1
position: 12103
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11114-12103:-1:exon

bpuSUM_RS09335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09335
old locus tag: bpuSUM_001866
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633324.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09335
subclass of: SO_0000673
so part of: bpuSUM_RS09335
location: complement(11114..>12103)
location: region:11114-12103:-1
so has part: feature:11114-12103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11114-12103:-1:exon

bpuSUM_RS09340
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09340
old locus tag: bpuSUM_001867
pseudo: true
so part of: sequence
location: complement(12203..13284)
location: region:12203-13284:-1
so has part: feature:12203-13284:-1:exon
subclass of: SO_0000010

position:12203:-1
position: 12203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13284:-1
position: 13284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12203-13284:-1:exon

bpuSUM_RS09340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09340
old locus tag: bpuSUM_001867
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014687078.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09340
subclass of: SO_0000673
so part of: bpuSUM_RS09340
location: complement(12203..13284)
location: region:12203-13284:-1
so has part: feature:12203-13284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12203-13284:-1:exon

bpuSUM_RS09345
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09345
old locus tag: bpuSUM_001868
so part of: sequence
location: complement(13401..14450)
location: region:13401-14450:-1
so has part: feature:13401-14450:-1:exon
subclass of: SO_0000010

position:13401:-1
position: 13401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14450:-1
position: 14450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13401-14450:-1:exon

bpuSUM_RS09345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09345
old locus tag: bpuSUM_001868
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALFLTLFLLLSCGSGTTSAEDPKTTFLNSIANLGKGFLDVFTSLSDMVGGVLGFNTNTKKSDVGNYFKKVHDTVQGTKDKLEKIVTDMKSENNPNAASTETAINKLVSETLNKIIDGAKTASEAIGTTGDELLGNVAADNNGGAAGTEVDKLVQGIKSIVDVVLKDKGNPEAGDDKKAEDGNSARNNDGAGKLFDGSTGAGADDRKAAADAAKAIGAVIGADILQAMVKDNGNATKLAKNNAGIAASGVAAPKDAEVAGGIALRAMAKGGKFANGNNVADAKKIVEGATVSAVTKALNTLTIAIKNTIDLGLKTVKDAVKFNFTDTPITNDNQIPETKNNK
SIO_010081: bpuSUM_RS09345
subclass of: SO_0000673
so part of: bpuSUM_RS09345
location: complement(13401..14450)
location: region:13401-14450:-1
so has part: feature:13401-14450:-1:exon

WP_247068290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13401-14450:-1:exon

bpuSUM_RS09350
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09350
so part of: sequence
location: complement(14669..15214)
location: region:14669-15214:-1
so has part: feature:14669-15214:-1:exon
subclass of: SO_0000010

position:14669:-1
position: 14669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15214:-1
position: 15214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14669-15214:-1:exon

bpuSUM_RS09350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539550.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MQDSSLHSVESTQIFNGHITEEIIYQEFVKMGMQDFIANDLSKRYYRNELTYKDIEYLESNFNLKFEMLERSLKSEIIFVKTELDNKIDSVESNLNVKIDTKFNDLDNKIDIVKNELKSEISLVRKDMEINKMELNSKLDKTTSEFKSTSRLHNWMFGTLITLNIGIFLTLISIVYSLLNK
SIO_010081: bpuSUM_RS09350
subclass of: SO_0000673
so part of: bpuSUM_RS09350
location: complement(14669..15214)
location: region:14669-15214:-1
so has part: feature:14669-15214:-1:exon

WP_247068224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14669-15214:-1:exon

bpuSUM_RS09355
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09355
old locus tag: bpuSUM_001871
so part of: sequence
location: complement(15449..16483)
location: region:15449-16483:-1
so has part: feature:15449-16483:-1:exon
subclass of: SO_0000010

position:15449:-1
position: 15449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16483:-1
position: 16483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15449-16483:-1:exon

bpuSUM_RS09355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09355
old locus tag: bpuSUM_001871
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKRITLCALFLTLFLLLGCGSGSTNAENPQSRFLKSLISLGNDFLNVFTSLSDMVGGILGFNNTTKKSDVGNYFKTIEKSLTTTKTSLEKIIADMKSENNPNAEATDTAVQSLITNTLDKIIAGSKTVSEAIGSDTNDLLGNVAAQNNGGAAGTEVDKLVKGIKSIVDVVLQGKGNPEAGTEKKADDLGDRSNNAADGEAGKVFAIANDPKKSAVDALKAVGAVTGADILQAMVKDNDDSAKLAKETSGNVTVAPKDSTIAGGIALRAMTKGGKFANDNAGTEEVTAAVKGAAVSTVTKALGTLTIAIRKTIDRGLKEVKDSMKFNSADPSVTTYRQILEAKKN
SIO_010081: bpuSUM_RS09355
subclass of: SO_0000673
so part of: bpuSUM_RS09355
location: complement(15449..16483)
location: region:15449-16483:-1
so has part: feature:15449-16483:-1:exon

WP_247068226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15449-16483:-1:exon

bpuSUM_RS09360
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09360
old locus tag: bpuSUM_001872
pseudo: true
so part of: sequence
location: complement(16612..17634)
location: region:16612-17634:-1
so has part: feature:16612-17634:-1:exon
subclass of: SO_0000010

position:16612:-1
position: 16612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17634:-1
position: 17634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16612-17634:-1:exon

bpuSUM_RS09360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09360
old locus tag: bpuSUM_001872
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633353.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09360
subclass of: SO_0000673
so part of: bpuSUM_RS09360
location: complement(16612..17634)
location: region:16612-17634:-1
so has part: feature:16612-17634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16612-17634:-1:exon

bpuSUM_RS09365
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09365
old locus tag: bpuSUM_001873
so part of: sequence
location: complement(17830..18471)
location: region:17830-18471:-1
so has part: feature:17830-18471:-1:exon
subclass of: SO_0000010

position:17830:-1
position: 17830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18471:-1
position: 18471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17830-18471:-1:exon

bpuSUM_RS09365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09365
old locus tag: bpuSUM_001873
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633342.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MMKRITLCALLMTLFLLISCNTSGKDLTDDEVAKSDGTVIDLAKITKNIKDSVAFAKSVKEIHSLVKSIDTLAKAIGKKIQNQDQSPLTNDAGNGHNTTLIAGVFQIVLTVSSKLTELEKDVAISAVLKTKVTEAKTKSTEFLAKLKGEAATLGVASGAATSDDAKKAIDITGDGSKGGNELKALNTSIDALLKDAEAAVTSAINALTTPVKP
SIO_010081: bpuSUM_RS09365
subclass of: SO_0000673
so part of: bpuSUM_RS09365
location: complement(17830..18471)
location: region:17830-18471:-1
so has part: feature:17830-18471:-1:exon

WP_247068292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17830-18471:-1:exon

bpuSUM_RS09370
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09370
old locus tag: bpuSUM_001874
so part of: sequence
location: complement(18594..19640)
location: region:18594-19640:-1
so has part: feature:18594-19640:-1:exon
subclass of: SO_0000010

position:18594:-1
position: 18594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19640:-1
position: 19640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18594-19640:-1:exon

bpuSUM_RS09370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09370
old locus tag: bpuSUM_001874
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALFLTLFLLLSCGSGSASAEDPKTTFLNSIANLGKGFLDVFTSLSDMITGALGIKADTKKSDIGKYFNDIENTMTSVKKKLQDQVAKNGNYLKVKEVVDTFITNTLDKIAEGAKTAAKGATGDVTIGNAVKNEDAKPADATSVNALVKGIKEMVGVVLKDKGNADANGAKIEDTERKSIGKLLGKGAADGTESHAAAASASIGAVTGADILKAIASSGDAAAGGVDIDQAKNAAEIAAAKADSKDLKADQKDAVVAAGIALRAMAKDGKFAAKNNEDKSANAVNGVAASAVGKTLSTLIIAIRNTVDSGLKTINAALATVTQEDKFVDSTTPADSTASGQ
SIO_010081: bpuSUM_RS09370
subclass of: SO_0000673
so part of: bpuSUM_RS09370
location: complement(18594..19640)
location: region:18594-19640:-1
so has part: feature:18594-19640:-1:exon

WP_247068294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18594-19640:-1:exon

bpuSUM_RS09375
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09375
pseudo: true
so part of: sequence
location: complement(19861..20404)
location: region:19861-20404:-1
so has part: feature:19861-20404:-1:exon
subclass of: SO_0000010

position:19861:-1
position: 19861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20404:-1
position: 20404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19861-20404:-1:exon

bpuSUM_RS09375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539732.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Bdr family repetitive protein
SIO_010081: bpuSUM_RS09375
subclass of: SO_0000673
so part of: bpuSUM_RS09375
location: complement(19861..20404)
location: region:19861-20404:-1
so has part: feature:19861-20404:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19861-20404:-1:exon

bpuSUM_RS09380
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09380
old locus tag: bpuSUM_001876
so part of: sequence
location: complement(20716..21732)
location: region:20716-21732:-1
so has part: feature:20716-21732:-1:exon
subclass of: SO_0000010

position:20716:-1
position: 20716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21732:-1
position: 21732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20716-21732:-1:exon

bpuSUM_RS09380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09380
old locus tag: bpuSUM_001876
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MTLFLLLSCGSGTASAEDPKTTFLTSIANLGKGFLDVFTSLSDMVAGVFGIKAETKKEDIGKYFTSIETTMNTVKKKLNTVVAENGKYSKVKEVVDTFITGTLDKIAAGAKEAAKGAIGGAVGEVVKSDSAGNGPDAESIKSLVKGIKTIVDVVLKSNEGNATATKTAEGDKKDIGKLFENKDSATETEAAKASASIGAVTEADILKAIAKSGETADNSKDIEAATDAASIAAAKKEDNKKEIKDSAKKDAIIAVGITLRAMAKSGKFAAKSNEEKSAHAVNGVAANAVGKTLSTLIIAIRNTVDSGLRSISDALATVTQEDKSAEITTPADSTASGQ
SIO_010081: bpuSUM_RS09380
subclass of: SO_0000673
so part of: bpuSUM_RS09380
location: complement(20716..21732)
location: region:20716-21732:-1
so has part: feature:20716-21732:-1:exon

WP_247068228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20716-21732:-1:exon

bpuSUM_RS09385
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09385
so part of: sequence
location: complement(21964..22506)
location: region:21964-22506:-1
so has part: feature:21964-22506:-1:exon
subclass of: SO_0000010

position:21964:-1
position: 21964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22506:-1
position: 22506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21964-22506:-1:exon

bpuSUM_RS09385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CCDC90 family protein
translation: MGLAQPVITQQMVIAELTKAGIKRDIAIDLSYRYYRNELTYKDIEFLKENFDIKLEKVESLLHAEIKSVKTDLDNKIDTKFNELDNKIDNVRSELKSDIKELDNKIDTKFNELDNKINNVSNEVSLVRKDMEINRMDLDNKLDKTASEFKSTLRLHGWMFGTLITLNIGIFLALMSLLVK
SIO_010081: bpuSUM_RS09385
subclass of: SO_0000673
so part of: bpuSUM_RS09385
location: complement(21964..22506)
location: region:21964-22506:-1
so has part: feature:21964-22506:-1:exon

WP_247068230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21964-22506:-1:exon

bpuSUM_RS09390
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09390
old locus tag: bpuSUM_001879
pseudo: true
so part of: sequence
location: complement(22547..23899)
location: region:22547-23899:-1
so has part: feature:22547-23899:-1:exon
subclass of: SO_0000010

position:22547:-1
position: 22547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23899:-1
position: 23899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22547-23899:-1:exon

bpuSUM_RS09390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09390
old locus tag: bpuSUM_001879
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539230.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PBSX family phage terminase large subunit
SIO_010081: bpuSUM_RS09390
subclass of: SO_0000673
so part of: bpuSUM_RS09390
location: complement(22547..23899)
location: region:22547-23899:-1
so has part: feature:22547-23899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22547-23899:-1:exon

bpuSUM_RS09395
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09395
so part of: sequence
location: complement(23910..24134)
location: region:23910-24134:-1
so has part: feature:23910-24134:-1:exon
subclass of: SO_0000010

position:23910:-1
position: 23910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24134:-1
position: 24134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23910-24134:-1:exon

bpuSUM_RS09395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELKSYSQEIEILESQIIDLKRELGNEDNEEISNKILELNNVKRAKELKQINLLYQVMVKLKATDIDSQNKFTI
SIO_010081: bpuSUM_RS09395
subclass of: SO_0000673
so part of: bpuSUM_RS09395
location: complement(23910..24134)
location: region:23910-24134:-1
so has part: feature:23910-24134:-1:exon

WP_247067940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23910-24134:-1:exon

bpuSUM_RS09400
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09400
so part of: sequence
location: complement(24177..24443)
location: region:24177-24443:-1
so has part: feature:24177-24443:-1:exon
subclass of: SO_0000010

position:24177:-1
position: 24177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24443:-1
position: 24443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24177-24443:-1:exon

bpuSUM_RS09400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683381.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF603 domain-containing protein
translation: MNREKKSFDDYIVYFNEDRLSDIVKDMGVSRANMCKMRRKWESRDVNNMDSASKLTISKDTLINILIRASESNLQASNIKSQFSIVKN
SIO_010081: bpuSUM_RS09400
subclass of: SO_0000673
so part of: bpuSUM_RS09400
location: complement(24177..24443)
location: region:24177-24443:-1
so has part: feature:24177-24443:-1:exon

WP_247067942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24177-24443:-1:exon

bpuSUM_RS09405
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09405
so part of: sequence
location: complement(24663..24809)
location: region:24663-24809:-1
so has part: feature:24663-24809:-1:exon
subclass of: SO_0000010

position:24663:-1
position: 24663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24809:-1
position: 24809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24663-24809:-1:exon

bpuSUM_RS09405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDLNFSSAIRFSSAIIVACIVFADASIPFGMFSFIVFAIRCSSVIRD
SIO_010081: bpuSUM_RS09405
subclass of: SO_0000673
so part of: bpuSUM_RS09405
location: complement(24663..24809)
location: region:24663-24809:-1
so has part: feature:24663-24809:-1:exon

WP_247067943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24663-24809:-1:exon

bpuSUM_RS09410
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09410
old locus tag: bpuSUM_001881
so part of: sequence
location: 24847..25278
location: region:24847-25278:1
so has part: feature:24847-25278:1:exon
subclass of: SO_0000010

position:24847:1
position: 24847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25278:1
position: 25278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24847-25278:1:exon

bpuSUM_RS09410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09410
old locus tag: bpuSUM_001881
inference: COORDINATES: protein motif:HMM:NF015275.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mlp family lipoprotein
translation: MINHQYKQGYTDFKTWLENNPQKQKELADAFTEAYDFLEEQRKKHAPNEKFDEYITNAILANDGNGKISYNTQNGKYGNTVAQYFEERTFGGNSISIFFAAQLIESITTSFKTKSNEKTFEHVIANISYQTSQLKQYWPEETN
SIO_010081: bpuSUM_RS09410
subclass of: SO_0000673
so part of: bpuSUM_RS09410
location: 24847..25278
location: region:24847-25278:1
so has part: feature:24847-25278:1:exon

WP_247068009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24847-25278:1:exon

bpuSUM_RS09415
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09415
old locus tag: bpuSUM_001882
so part of: sequence
location: complement(26151..26657)
location: region:26151-26657:-1
so has part: feature:26151-26657:-1:exon
subclass of: SO_0000010

position:26151:-1
position: 26151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26657:-1
position: 26657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26151-26657:-1:exon

bpuSUM_RS09415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09415
old locus tag: bpuSUM_001882
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIDGWFVNSDCEAELLEIKFIDNFYLKSAAFEYNRLSNFLEDKYFFKYYVQVQMQLLCTGLDKGNLFFIIGGELVNCVIDKSDDFISYVMVDISRLERDVISIAKSLKSNSDIDIKNIELYKLSDIIRDFLKNSFVYEELCDVDFKFEFLKFVKSSQLEINGGGKQR
SIO_010081: bpuSUM_RS09415
subclass of: SO_0000673
so part of: bpuSUM_RS09415
location: complement(26151..26657)
location: region:26151-26657:-1
so has part: feature:26151-26657:-1:exon

WP_247067945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26151-26657:-1:exon

bpuSUM_RS09420
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09420
old locus tag: bpuSUM_001883
so part of: sequence
location: complement(26663..27187)
location: region:26663-27187:-1
so has part: feature:26663-27187:-1:exon
subclass of: SO_0000010

position:26663:-1
position: 26663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27187:-1
position: 27187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26663-27187:-1:exon

bpuSUM_RS09420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09420
old locus tag: bpuSUM_001883
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNINVIKINNQRTGVEMQQFDLYGQMVFKGFESFAYQSQKNLKSKQKQLSKINKVGRKLPKIGKNECFKFNSKVDFSMQRESLKRMGASEVGSMFSGAGALEKLMRERILKAIGREIPFEDNLSMRKGKELENLGFEEFVRMHVGNIEVLHKNKYANGIDKCNYFKKLRTVRH
SIO_010081: bpuSUM_RS09420
subclass of: SO_0000673
so part of: bpuSUM_RS09420
location: complement(26663..27187)
location: region:26663-27187:-1
so has part: feature:26663-27187:-1:exon

WP_247068232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26663-27187:-1:exon

bpuSUM_RS09425
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09425
old locus tag: bpuSUM_001884
so part of: sequence
location: 27329..28426
location: region:27329-28426:1
so has part: feature:27329-28426:1:exon
subclass of: SO_0000010

position:27329:1
position: 27329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28426:1
position: 28426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27329-28426:1:exon

bpuSUM_RS09425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09425
old locus tag: bpuSUM_001884
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MKNTKKPTNKHQHKLIVLVSTLDYVNLNIQQYTQSNILYYFNNNMKKNDQKPIKLKTLQSYLYKLEKVFKVTINYYKHLGVNMGTEIHYKLKYSKKECYRIINKHFRDKKEERHKNRVSVYLEKTCTKNSSVEKWECSNNTYNNKEKDKNNVKSIEKLQVKKYAKKCNFKSNAFLSILNLEANKNFKIQLLKAIKIAENSEYKRINDIKSNNSKLKSKQKELSKILDEIKAGLENKGYDTKQLETQIQNVYEQYKNKPHFIIEKNKYNDLKKIIGKLKKTVEFANKNTQKNERDIRDNIFSILLEQLRHKVEMSVLVPILKNYLSRQNKLEYDKVFSNHYYYELLELMEDNKNYLQLEESKKITS
SIO_010081: bpuSUM_RS09425
subclass of: SO_0000673
so part of: bpuSUM_RS09425
location: 27329..28426
location: region:27329-28426:1
so has part: feature:27329-28426:1:exon

WP_247068234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27329-28426:1:exon

bpuSUM_RS09430
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09430
old locus tag: bpuSUM_001885
so part of: sequence
location: 28436..28999
location: region:28436-28999:1
so has part: feature:28436-28999:1:exon
subclass of: SO_0000010

position:28436:1
position: 28436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28999:1
position: 28999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28436-28999:1:exon

bpuSUM_RS09430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09430
old locus tag: bpuSUM_001885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MQSVLECLKEKKLEIKDKVKSRGLFIKIEKIDNKTIYHTKIMNDFYAFGIDEKQKDKFFISFRKLFNQLKVEWFSLFPIKESDKFLGIHYGYRKPLQNIIVRYEHEGVSKTYTFSKVYYIEFRFKKGSVFCYIKGIYRLIKKERLQTTYNNLLLSRMLNLEEQVYEFYNKKLPKGGIITKWIEKNLK
SIO_010081: bpuSUM_RS09430
subclass of: SO_0000673
so part of: bpuSUM_RS09430
location: 28436..28999
location: region:28436-28999:1
so has part: feature:28436-28999:1:exon

WP_247068235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28436-28999:1:exon

bpuSUM_RS09435
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09435
old locus tag: bpuSUM_001886
so part of: sequence
location: 28975..29724
location: region:28975-29724:1
so has part: feature:28975-29724:1:exon
subclass of: SO_0000010

position:28975:1
position: 28975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29724:1
position: 29724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28975-29724:1:exon

bpuSUM_RS09435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09435
old locus tag: bpuSUM_001886
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDRKKPKIITIASIKGGVGKSTSAIIFATLLAKDHKVLLIDMDTQASSTSYFINTIEKQKVDIIQYNIYEVIKNNINVNESIINIYDGLDLIPSYLSLYQFNAETILFKEMRLKENLKLLNIKYDYIILDTNPSLDFTLVNALVVSNYIIVPMTAEKWAVESLQLLEHFIKKAGFKIPIFLIVTRFRTNKTHKYLLNLIKPRENFLGSIKEREDLNRKIANNATFDIDKDYIKEYQDIFNKFLKKINTV
SIO_010081: bpuSUM_RS09435
subclass of: SO_0000673
so part of: bpuSUM_RS09435
location: 28975..29724
location: region:28975-29724:1
so has part: feature:28975-29724:1:exon

WP_247068237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28975-29724:1:exon

bpuSUM_RS09440
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09440
old locus tag: bpuSUM_001887
so part of: sequence
location: 29762..30298
location: region:29762-30298:1
so has part: feature:29762-30298:1:exon
subclass of: SO_0000010

position:29762:1
position: 29762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30298:1
position: 30298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29762-30298:1:exon

bpuSUM_RS09440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09440
old locus tag: bpuSUM_001887
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696708.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MQIQVNDRVLKKIDSEEELRIYYNRLKENFINSFKKEIVYKIECMKILKEIKDNEYYKMDGFKTFDSFTKNFKIARSQIYNYLKLAGAMENGLISEEYLLENGINDSLDLIKNKERSTLKTSKQNPIKPLKFQLKKQESYDFYKQDSKFIAFFLDEIFSNQKDLLDKLLKKFKDLKNE
SIO_010081: bpuSUM_RS09440
subclass of: SO_0000673
so part of: bpuSUM_RS09440
location: 29762..30298
location: region:29762-30298:1
so has part: feature:29762-30298:1:exon

WP_247068246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29762-30298:1:exon

bpuSUM_RS09445
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09445
old locus tag: bpuSUM_001888
so part of: sequence
location: 30717..31133
location: region:30717-31133:1
so has part: feature:30717-31133:1:exon
subclass of: SO_0000010

position:30717:1
position: 30717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31133:1
position: 31133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30717-31133:1:exon

bpuSUM_RS09445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09445
old locus tag: bpuSUM_001888
inference: COORDINATES: protein motif:HMM:NF016302.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ERF family protein
translation: MNLSSVAKNLNGYGYKYQDFNEIIREIKSVIKSNNLDIDFVQYPTIKNFDGDLVKVITTTFYSPSSGYCESFDTTIYTEEFFSLGAKNQNILPQFIGLCMIYTRGYALVGYYQLRVKLTLMLVPWSVFKKLMKNKLVV
SIO_010081: bpuSUM_RS09445
subclass of: SO_0000673
so part of: bpuSUM_RS09445
location: 30717..31133
location: region:30717-31133:1
so has part: feature:30717-31133:1:exon

WP_247068255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30717-31133:1:exon

bpuSUM_RS09450
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09450
old locus tag: bpuSUM_001889
so part of: sequence
location: 31306..31509
location: region:31306-31509:1
so has part: feature:31306-31509:1:exon
subclass of: SO_0000010

position:31306:1
position: 31306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31509:1
position: 31509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31306-31509:1:exon

bpuSUM_RS09450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09450
old locus tag: bpuSUM_001889
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQVSKRMHSVLDEIPFDNLEIIDKFLLQLQSDDDSNIFSYFETKPELKTIEYWTEFINNYLTYFIF
SIO_010081: bpuSUM_RS09450
subclass of: SO_0000673
so part of: bpuSUM_RS09450
location: 31306..31509
location: region:31306-31509:1
so has part: feature:31306-31509:1:exon

WP_247068257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31306-31509:1:exon

bpuSUM_RS09455
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09455
old locus tag: bpuSUM_001890
pseudo: true
so part of: sequence
location: <31519..32478
location: region:31519-32478:1
so has part: feature:31519-32478:1:exon
subclass of: SO_0000010

position:31519:1
position: 31519
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:32478:1
position: 32478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31519-32478:1:exon

bpuSUM_RS09455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09455
old locus tag: bpuSUM_001890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539547.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09455
subclass of: SO_0000673
so part of: bpuSUM_RS09455
location: <31519..32478
location: region:31519-32478:1
so has part: feature:31519-32478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31519-32478:1:exon

bpuSUM_RS09460
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09460
old locus tag: bpuSUM_001891
so part of: sequence
location: 32609..33655
location: region:32609-33655:1
so has part: feature:32609-33655:1:exon
subclass of: SO_0000010

position:32609:1
position: 32609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33655:1
position: 33655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32609-33655:1:exon

bpuSUM_RS09460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09460
old locus tag: bpuSUM_001891
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683335.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MCVILTLFLLLSCGSGTTSAGDPKTTFLTSIANLSNDFLNVFTSLSDMVGGVLGFNTNTKKSDVAVYFKTVQETLSSTKRSLEKIVEDMKSENNPNASKTETTVRTLVDDTLSKIIDGAKTASEAIGSDASDLLGNVAAGGAGAAAGAKGENVENLIKGIKHIVDIVLKGKGSADAGTDKKADDLAARTANDGVAKLFASDNAGDEANLKKVAADAAKAVGAVTGADILQAIVKDGGAAAKLAINNTASAGGVATADNAKDATVAGGIALRAMAKNGKFAGSSDNANDDAKKAVEGAALSAVTKALDTLTIAIRNTIDGGLKTVKDAIKFNSTDTSVTTDKQVPETKS
SIO_010081: bpuSUM_RS09460
subclass of: SO_0000673
so part of: bpuSUM_RS09460
location: 32609..33655
location: region:32609-33655:1
so has part: feature:32609-33655:1:exon

WP_247068259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32609-33655:1:exon

bpuSUM_RS09465
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09465
old locus tag: bpuSUM_001892
pseudo: true
so part of: sequence
location: 33787..34819
location: region:33787-34819:1
so has part: feature:33787-34819:1:exon
subclass of: SO_0000010

position:33787:1
position: 33787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34819:1
position: 34819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33787-34819:1:exon

bpuSUM_RS09465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09465
old locus tag: bpuSUM_001892
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09465
subclass of: SO_0000673
so part of: bpuSUM_RS09465
location: 33787..34819
location: region:33787-34819:1
so has part: feature:33787-34819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33787-34819:1:exon

bpuSUM_RS09470
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09470
old locus tag: bpuSUM_001893
so part of: sequence
location: 34940..36013
location: region:34940-36013:1
so has part: feature:34940-36013:1:exon
subclass of: SO_0000010

position:34940:1
position: 34940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36013:1
position: 36013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34940-36013:1:exon

bpuSUM_RS09470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09470
old locus tag: bpuSUM_001893
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALLMTLFLLLSCGSGSTKMEDPKTTFLDSLVKIGHGFYEIFGIFGNAIGDAFGLTAVKSGDKKSKVGEHFDKIKKGLEDTNGKLKELSGEISGAKNANSSTIESVKSAINSANDVFEQLIAALITLADVTKEDVLLGGHNNNAAPGAADENDVKTIIENVKTIIEVADKSDVKIEKGTEGGAITANASTDAPAVLGGNNAHAAAGAGSKLADEVTKADPWAIIDKIKNATATTPAKLNGANNEVGALAASNDKADAAAGAKSNADLVAAVALKAMTKNGKFSAVDADKDIVKAAAASAVNKVLGILDFIIRKTVSSNLNKIKEAVKGIQYSETTTQSTEASAAQPTATK
SIO_010081: bpuSUM_RS09470
subclass of: SO_0000673
so part of: bpuSUM_RS09470
location: 34940..36013
location: region:34940-36013:1
so has part: feature:34940-36013:1:exon

WP_247068297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34940-36013:1:exon

bpuSUM_RS09475
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09475
old locus tag: bpuSUM_001894
so part of: sequence
location: 36125..36757
location: region:36125-36757:1
so has part: feature:36125-36757:1:exon
subclass of: SO_0000010

position:36125:1
position: 36125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36757:1
position: 36757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36125-36757:1:exon

bpuSUM_RS09475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09475
old locus tag: bpuSUM_001894
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633303.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MMKRITLCALFLTLFLLISCNTSGKNLTDDEVAKSDGTVIDLAKITKNITDTVAFAKDVKEIHSLVKSIDTLAKAIGKKIVAGGATGTVSNKNASLVAGAYNVIVAVETKLGELEKKVGLSSDLKGKVTAAMAAGTKFLTTLKGATNEIGQDETTDENAKKAIDISDATGDKGAKDLIALNTSVNELLTDAEAAVTSAIKELASPVKPSN
SIO_010081: bpuSUM_RS09475
subclass of: SO_0000673
so part of: bpuSUM_RS09475
location: 36125..36757
location: region:36125-36757:1
so has part: feature:36125-36757:1:exon

WP_247068299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36125-36757:1:exon

bpuSUM_RS09480
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09480
old locus tag: bpuSUM_001895
pseudo: true
so part of: sequence
location: 36903..37946
location: region:36903-37946:1
so has part: feature:36903-37946:1:exon
subclass of: SO_0000010

position:36903:1
position: 36903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37946:1
position: 37946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36903-37946:1:exon

bpuSUM_RS09480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09480
old locus tag: bpuSUM_001895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683290.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09480
subclass of: SO_0000673
so part of: bpuSUM_RS09480
location: 36903..37946
location: region:36903-37946:1
so has part: feature:36903-37946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36903-37946:1:exon

bpuSUM_RS09485
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09485
old locus tag: bpuSUM_001896
so part of: sequence
location: 38123..38719
location: region:38123-38719:1
so has part: feature:38123-38719:1:exon
subclass of: SO_0000010

position:38123:1
position: 38123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38719:1
position: 38719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38123-38719:1:exon

bpuSUM_RS09485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09485
old locus tag: bpuSUM_001896
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633303.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MTLFLLLSCNTSGKNLKGDEVAKSDGTVIDLAKITKNITDTVAFAKGVKDVHSLVKSIDELAKAIGKKVEAAGGATGTVSNKNASLVAGAYNVIVAVETKLGELEKKVGLSSDLKGKVTAATAAGTKFLTALKGATNEIGQDETIDENAKKAIKKDNDDKTKGAEELLALNTAIDALLTAADAVVTSAINELTTPAKP
SIO_010081: bpuSUM_RS09485
subclass of: SO_0000673
so part of: bpuSUM_RS09485
location: 38123..38719
location: region:38123-38719:1
so has part: feature:38123-38719:1:exon

WP_247068261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38123-38719:1:exon

bpuSUM_RS09490
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09490
old locus tag: bpuSUM_001897
pseudo: true
so part of: sequence
location: 38922..39998
location: region:38922-39998:1
so has part: feature:38922-39998:1:exon
subclass of: SO_0000010

position:38922:1
position: 38922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39998:1
position: 39998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38922-39998:1:exon

bpuSUM_RS09490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09490
old locus tag: bpuSUM_001897
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539515.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09490
subclass of: SO_0000673
so part of: bpuSUM_RS09490
location: 38922..39998
location: region:38922-39998:1
so has part: feature:38922-39998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38922-39998:1:exon

bpuSUM_RS09495
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09495
old locus tag: bpuSUM_001898
so part of: sequence
location: 40146..41171
location: region:40146-41171:1
so has part: feature:40146-41171:1:exon
subclass of: SO_0000010

position:40146:1
position: 40146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41171:1
position: 41171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40146-41171:1:exon

bpuSUM_RS09495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09495
old locus tag: bpuSUM_001898
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MTLFLLLSSGSGSASAEDPKTTFLTSIANLGKGFLDVSTSLSDMVSGAFGIKADTKKSDIGKYFSDIEKTMTSVKEKLQTEVATNGNYEKVKSVVDTFITDTLDKIADGAKEAAKGATGDAIGNATSAGHGATAASKDSVVSLVKGIKTIVDVVLKKGEGDAGATKTGEGDKKDIGKLFDGKKDDAKEENIAKASASIGSVTGADILQAIAKSTENPNVDNANGIEKAKDAAEIAIAKAVNDKKEIKEDSAKKDAVIAAGIALRAMAKDGKFAANAEKDANAVNGVAANAVGKTLSTLIIAIRNTVDSGLKTISEALAALKQEDKSSDSTTPADSTANGRQ
SIO_010081: bpuSUM_RS09495
subclass of: SO_0000673
so part of: bpuSUM_RS09495
location: 40146..41171
location: region:40146-41171:1
so has part: feature:40146-41171:1:exon

WP_247068270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40146-41171:1:exon

bpuSUM_RS09500
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09500
old locus tag: bpuSUM_001899
so part of: sequence
location: 41299..41940
location: region:41299-41940:1
so has part: feature:41299-41940:1:exon
subclass of: SO_0000010

position:41299:1
position: 41299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41940:1
position: 41940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41299-41940:1:exon

bpuSUM_RS09500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09500
old locus tag: bpuSUM_001899
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKRITLCALLMTLFLLISCNTSGKNLKEDEVAKLDGTVIDLAKVSAEIKETTVFVAGLREVQVLVFSIDDLAKVIGKKIDANGSLVDDSNHHGPLVSGAYQIITSVNTKLKALELEAEKFDGMKSKIVAAKTLGEGFLTKLKTAHSDIAKNDAQDTDVKKALVKDNDDKTKGAEELGKLNAVVNDLVNSAKELAENAIKKLTVSVKKISTQSS
SIO_010081: bpuSUM_RS09500
subclass of: SO_0000673
so part of: bpuSUM_RS09500
location: 41299..41940
location: region:41299-41940:1
so has part: feature:41299-41940:1:exon

WP_247068272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41299-41940:1:exon

bpuSUM_RS09505
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09505
old locus tag: bpuSUM_001900
pseudo: true
so part of: sequence
location: <42244..43206
location: region:42244-43206:1
so has part: feature:42244-43206:1:exon
subclass of: SO_0000010

position:42244:1
position: 42244
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:43206:1
position: 43206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42244-43206:1:exon

bpuSUM_RS09505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09505
old locus tag: bpuSUM_001900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633331.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09505
subclass of: SO_0000673
so part of: bpuSUM_RS09505
location: <42244..43206
location: region:42244-43206:1
so has part: feature:42244-43206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42244-43206:1:exon

bpuSUM_RS09510
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09510
old locus tag: bpuSUM_001901
so part of: sequence
location: 43286..44311
location: region:43286-44311:1
so has part: feature:43286-44311:1:exon
subclass of: SO_0000010

position:43286:1
position: 43286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44311:1
position: 44311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43286-44311:1:exon

bpuSUM_RS09510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09510
old locus tag: bpuSUM_001901
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MYCCNKTNAEKLDAENKNTFLDSLVKIGQGFQEVFGIFGNAIGDAFGLTAVKSGDQRSKVGEHFKTIGDGLSTTKEKLKELSDEISGAKNANGSTIKLVEDAIKGANDVFDKLIDSVTKLSGVANDASPIGDNAANAAVAADKDSVEAIIKEVKAIIETAKESGVKIDSGKAGSPVAANAQTDATAVLTANAAAGANAGLKLAEEVSKADPWAMIDKIKDSKTTAGNLNQNNNYDAGELATGTPNQANGSKAATNADLAAAVALKAMTKTGKFSANAADDGAVKAAAVTAVNKVLGILDLIIRKTVSSNLNKIREAVKGIQYSETTIESTEASSTQPTVTK
SIO_010081: bpuSUM_RS09510
subclass of: SO_0000673
so part of: bpuSUM_RS09510
location: 43286..44311
location: region:43286-44311:1
so has part: feature:43286-44311:1:exon

WP_247068274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43286-44311:1:exon

bpuSUM_RS09515
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09515
old locus tag: bpuSUM_001902
so part of: sequence
location: 44479..45528
location: region:44479-45528:1
so has part: feature:44479-45528:1:exon
subclass of: SO_0000010

position:44479:1
position: 44479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45528:1
position: 45528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44479-45528:1:exon

bpuSUM_RS09515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09515
old locus tag: bpuSUM_001902
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633313.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MTLFLLLSCGSGQQSLDSANGGGAATGGSSLSSVLMDIGRSAENAFYSFLDLLSGTLGLRVTKDTKKSDVAGYFSSLGAKLGVASKELEEVVVKATSGVDTSDASKNPIKVAIDTAKATLSTLKTHLDSLKDIGDDNKVVDVTVSQSGVAANQAKLESIYDALKGIVTAATTEGIAEPKKSTVKVINTSLGGTNPENGAKVLTSGAVAGGDAGLEAATIVSTVSGEEILAAIVGSSKSDAAGTISSNVNQDTSALKFAKGGATASHLAQTSALAGAVSGGIALRSLVKDGKLASHSGNDNKAVQSAGITAVNKLLVAVEDVIKKTVKNVLKTAKDKIDEARAPKEAGQQ
SIO_010081: bpuSUM_RS09515
subclass of: SO_0000673
so part of: bpuSUM_RS09515
location: 44479..45528
location: region:44479-45528:1
so has part: feature:44479-45528:1:exon

WP_247068275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44479-45528:1:exon

bpuSUM_RS09520
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09520
old locus tag: bpuSUM_001903
pseudo: true
so part of: sequence
location: <45625..46623
location: region:45625-46623:1
so has part: feature:45625-46623:1:exon
subclass of: SO_0000010

position:45625:1
position: 45625
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:46623:1
position: 46623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45625-46623:1:exon

bpuSUM_RS09520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09520
old locus tag: bpuSUM_001903
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683270.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09520
subclass of: SO_0000673
so part of: bpuSUM_RS09520
location: <45625..46623
location: region:45625-46623:1
so has part: feature:45625-46623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45625-46623:1:exon

bpuSUM_RS09525
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09525
old locus tag: bpuSUM_001904
so part of: sequence
location: 46696..47682
location: region:46696-47682:1
so has part: feature:46696-47682:1:exon
subclass of: SO_0000010

position:46696:1
position: 46696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47682:1
position: 47682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46696-47682:1:exon

bpuSUM_RS09525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09525
old locus tag: bpuSUM_001904
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MTLFLLLGCDSGTTSAEDSQGRFLKSVISLGNDFLNVFTSLSDMVGGVLGFNTTTKKSDVENYFKTIEKSLTTTKTSLEKIVSDMKSEKNPNAEATDTAVKKLVSEILNKIIEGAKTASEVIGDAGDPIGNVGANNAAGVVGTEVDKLVKGIKDIVAVVLKEGNPEAGTDKKAEDLSARTANGNGEAGKLFAANAGDDANAKKVAADAAKAVGAVTGADILKAMIKNGANSAVEAAKANAKDGTIAGAIALTAMAKDGKFAGPTADSVDYVTAAKGAAISAVTKALGTLTIAIRNTVDVGLKTVKDAMKFNSTDTPVTTDNTTSETKK
SIO_010081: bpuSUM_RS09525
subclass of: SO_0000673
so part of: bpuSUM_RS09525
location: 46696..47682
location: region:46696-47682:1
so has part: feature:46696-47682:1:exon

WP_247068278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46696-47682:1:exon

bpuSUM_RS09530
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09530
old locus tag: bpuSUM_001905
so part of: sequence
location: 47810..48454
location: region:47810-48454:1
so has part: feature:47810-48454:1:exon
subclass of: SO_0000010

position:47810:1
position: 47810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48454:1
position: 48454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47810-48454:1:exon

bpuSUM_RS09530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09530
old locus tag: bpuSUM_001905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633323.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKRITLCALLMTLFLLLSCNTSGKNLTDDEVAKSDGTVIDLAKITKNIKDSVAFAKSVTEVHSLVKSIDELAKAIGKKIQNQDTLGTDSGKNTALIAGVFSITLDIVKKSKALQISEFIKDQQNLTQKVSGVTTAAEAFINKLKNKTGELAVDSGATTDDNAQKAIDRNGKPSGENGAKELGDLNTAVDTLLKDAEAAVTSAIKELSTSVKPSN
SIO_010081: bpuSUM_RS09530
subclass of: SO_0000673
so part of: bpuSUM_RS09530
location: 47810..48454
location: region:47810-48454:1
so has part: feature:47810-48454:1:exon

WP_247067987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47810-48454:1:exon

bpuSUM_RS09535
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09535
old locus tag: bpuSUM_001906
so part of: sequence
location: 48706..49710
location: region:48706-49710:1
so has part: feature:48706-49710:1:exon
subclass of: SO_0000010

position:48706:1
position: 48706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49710:1
position: 49710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48706-49710:1:exon

bpuSUM_RS09535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09535
old locus tag: bpuSUM_001906
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MLFLLFSCGSGTTGAEDPKTTFLNSIANLGKGFLDVFTSLSDMVAGAFGINAETKKSDIGNYFTSIENTMTSVKEKLQDQVTKNGNYEKVKTVVDKFITNTLDKIAEGAKEAAKGATGSDAIGGATTAGQDAVAADTTSVNLLVKGIKEIVGVVLKDGDGDATKTKDEQQKTIGKLLGANANSTDAEAAAASASIGAVTGADILQSIAKSGETANNDVEIEKAKNAAEIAAAKKEANKEIKDEAQKDAVIAAGIALRAMAKDGKFAAKTEEKSANAVNGVAASAVNKTLSTLIIAIRNTIDSGLKTSSDALAAVKQEDKSADVNTPVDAATSGQ
SIO_010081: bpuSUM_RS09535
subclass of: SO_0000673
so part of: bpuSUM_RS09535
location: 48706..49710
location: region:48706-49710:1
so has part: feature:48706-49710:1:exon

WP_247068019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48706-49710:1:exon

bpuSUM_RS09540
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09540
so part of: sequence
location: 50002..50718
location: region:50002-50718:1
so has part: feature:50002-50718:1:exon
subclass of: SO_0000010

position:50002:1
position: 50002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50718:1
position: 50718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50002-50718:1:exon

bpuSUM_RS09540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MGLAQPVVTQQMVIAELTKAGINRDIAIDLSYRYYKNELTHKDIEYLETTFNLKLEKVEATLQADIRDLDNKIDNVRNELKSDIRDLDNKIDSVENNLNIKIDNVKSELKSDIRDLDNKIDSVENNLNIKIDTKFNELDNKIDNVRGELKSDIKDLDTKIDTVENNLNIKIDTKFNELDNKIDTVRIELKSDIKDLDNKIDVNKMELKSTLRLHGWMFGTLITLNIGIFLALMSLLVK
SIO_010081: bpuSUM_RS09540
subclass of: SO_0000673
so part of: bpuSUM_RS09540
location: 50002..50718
location: region:50002-50718:1
so has part: feature:50002-50718:1:exon

WP_247067996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50002-50718:1:exon

bpuSUM_RS09545
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09545
old locus tag: bpuSUM_001909
so part of: sequence
location: 50861..51916
location: region:50861-51916:1
so has part: feature:50861-51916:1:exon
subclass of: SO_0000010

position:50861:1
position: 50861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51916:1
position: 51916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50861-51916:1:exon

bpuSUM_RS09545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09545
old locus tag: bpuSUM_001909
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKRITLCALFLTLFLLLGCGSGTTKMEDPQSRFLKSVISLGNDFLNVFTSLSDMVGGVLGFNTTTKKSDVGNYFKTMHDTLSSTKTSLEKIVADMKSDNNPNAEATDTAVKSLITNTLDQIIQGAKTASEAIGTDSNDLLGNVAAQNNGGAAGSEVDKLVKGIKSIVDVVLGEKKGNSDAGDDKKASDGSTARTAAAGDGESGKLFATGAGAVGDVNNSKKVAADAAKAVGAVTGADILQAMIKDDGDAVKLATSQNAGAAPKDATIAGGIALRAMAKNGKFAGPSAAADDAVTAVKGAAISAVTKALDTLTIAIRNTIDSGLKTIKDAMNINPTDTTLTNDNQASEAKKN
SIO_010081: bpuSUM_RS09545
subclass of: SO_0000673
so part of: bpuSUM_RS09545
location: 50861..51916
location: region:50861-51916:1
so has part: feature:50861-51916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50861-51916:1:exon

bpuSUM_RS09550
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09550
old locus tag: bpuSUM_001910
pseudo: true
so part of: sequence
location: 52041..53109
location: region:52041-53109:1
so has part: feature:52041-53109:1:exon
subclass of: SO_0000010

position:52041:1
position: 52041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53109:1
position: 53109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52041-53109:1:exon

bpuSUM_RS09550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09550
old locus tag: bpuSUM_001910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633313.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09550
subclass of: SO_0000673
so part of: bpuSUM_RS09550
location: 52041..53109
location: region:52041-53109:1
so has part: feature:52041-53109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52041-53109:1:exon

bpuSUM_RS09555
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09555
old locus tag: bpuSUM_001911
so part of: sequence
location: 54059..54946
location: region:54059-54946:1
so has part: feature:54059-54946:1:exon
subclass of: SO_0000010

position:54059:1
position: 54059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54946:1
position: 54946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54059-54946:1:exon

bpuSUM_RS09555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09555
old locus tag: bpuSUM_001911
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P12 family lipoprotein
translation: MKRNILSVCMLALLCLLSCDMNALNDLLNEVREKVLDESKDNKYLNHEQGNQEQKEVVIDSLEEGVEIQQDMEVKPVNAGFEVFRQEYPYYPQEEVIKIEEKDLVPSTESEKEAQAEIEKVKGALGDSGFQQLIKNALELKDRCERGRADFYDIMGKIQSERISLTKKRKENIEKIRKLTQLQNKLNDERSNLERLMNEVEVGLNERSSAKYFFEDSEKILKEAITDRLRNNKRRSYWSRRGNGDFLARKARSNAESSLEQLESSSVKLIEAMAKIKEIEELISEAKSALGNLSR
SIO_010081: bpuSUM_RS09555
subclass of: SO_0000673
so part of: bpuSUM_RS09555
location: 54059..54946
location: region:54059-54946:1
so has part: feature:54059-54946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54059-54946:1:exon

bpuSUM_RS09560
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: thyX
locus tag: bpuSUM_RS09560
old locus tag: bpuSUM_001912
pseudo: true
so part of: sequence
location: 55191..55930
location: region:55191-55930:1
so has part: feature:55191-55930:1:exon
subclass of: SO_0000010

position:55191:1
position: 55191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55930:1
position: 55930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55191-55930:1:exon

bpuSUM_RS09560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: thyX
locus tag: bpuSUM_RS09560
old locus tag: bpuSUM_001912
inference: COORDINATES: protein motif:HMM:NF014560.2
GO function: GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FAD-dependent thymidylate synthase
SIO_010081: bpuSUM_RS09560
subclass of: SO_0000673
so part of: bpuSUM_RS09560
location: 55191..55930
location: region:55191-55930:1
so has part: feature:55191-55930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55191-55930:1:exon

bpuSUM_RS09565
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09565
old locus tag: bpuSUM_001913
pseudo: true
so part of: sequence
location: 56031..56608
location: region:56031-56608:1
so has part: feature:56031-56608:1:exon
subclass of: SO_0000010

position:56031:1
position: 56031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56608:1
position: 56608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56031-56608:1:exon

bpuSUM_RS09565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09565
old locus tag: bpuSUM_001913
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012537734.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: bpuSUM_RS09565
subclass of: SO_0000673
so part of: bpuSUM_RS09565
location: 56031..56608
location: region:56031-56608:1
so has part: feature:56031-56608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56031-56608:1:exon