Borrelia puertoricensis strain SUM plasmid lp46, complete sequence.
type: Entry
definition: Borrelia puertoricensis strain SUM plasmid lp46, complete sequence.
sequence version: NZ_CP075398.1
sequence date: 2022-05-23
sequence: sequence
division: CON
label: NZ_CP075398.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN19000909
keyword: RefSeq
source: Borrelia puertoricensis
organism: Borrelia puertoricensis
taxonomy: Bacteria; Spirochaetes; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP075398.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1138.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/23/2022 17:07:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.1\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 1,976\nCDSs (total) :: 1,938\nGenes (coding) :: 1,830\nCDSs (with protein) :: 1,830\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 108\nCDSs (without protein) :: 108\nPseudo Genes (ambiguous residues) :: 0 of 108\nPseudo Genes (frameshifted) :: 72 of 108\nPseudo Genes (incomplete) :: 37 of 108\nPseudo Genes (internal stop) :: 24 of 108\nPseudo Genes (multiple problems) :: 23 of 108\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 45938
topology: linear
so has quality: SO_0000987
location: 1..45938
location: region:1-45938:1
RO_0002162: 2756107

NZ_CP075398
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN19000909
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Kneubehl, A.R.
author: Lopez, J.
journal: Submitted (17-MAY-2021) Pediatrics-Tropical Medicine, Baylor College of Medicine, 1102 Bates Ave, Houston, TX 77030, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45938:1
position: 45938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-45938:1:source
so part of: sequence
organism: Borrelia puertoricensis
mol type: genomic DNA
strain: SUM
isolation source: tick
host: Alectorobius puertoricensis
type material: type strain of Borrelia puertoricensis
plasmid: lp46
country: Panama
collection date: 2019-01-01

2756107
type: Taxonomy
SIO_000068: taxonomy

bpuSUM_RS08870
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08870
so part of: sequence
location: complement(32..190)
location: region:32-190:-1
so has part: feature:32-190:-1:exon
subclass of: SO_0000010

position:32:-1
position: 32
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190:-1
position: 190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32-190:-1:exon

bpuSUM_RS08870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFLNPPSSPSGPPPLIENDPEEKVFESIKKCVMSIDIEIKTKSYRMRFLRLA
SIO_010081: bpuSUM_RS08870
subclass of: SO_0000673
so part of: bpuSUM_RS08870
location: complement(32..190)
location: region:32-190:-1
so has part: feature:32-190:-1:exon

WP_247068076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32-190:-1:exon

bpuSUM_RS08875
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08875
so part of: sequence
location: complement(447..653)
location: region:447-653:-1
so has part: feature:447-653:-1:exon
subclass of: SO_0000010

position:447:-1
position: 447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653:-1
position: 653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447-653:-1:exon

bpuSUM_RS08875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MREKINFIYRIVFIFCIICFVSCELFKNSDNKGDLFQNLGHVNLKSDWRDNLKLNKEEFDTLTFLLMR
SIO_010081: bpuSUM_RS08875
subclass of: SO_0000673
so part of: bpuSUM_RS08875
location: complement(447..653)
location: region:447-653:-1
so has part: feature:447-653:-1:exon

WP_247068078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447-653:-1:exon

bpuSUM_RS08880
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: thyX
locus tag: bpuSUM_RS08880
old locus tag: bpuSUM_001773
so part of: sequence
location: complement(742..1566)
location: region:742-1566:-1
so has part: feature:742-1566:-1:exon
subclass of: SO_0000010

position:742:-1
position: 742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566:-1
position: 1566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742-1566:-1:exon

bpuSUM_RS08880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: thyX
locus tag: bpuSUM_RS08880
old locus tag: bpuSUM_001773
EC number: 2.1.1.148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012537731.1
GO function: GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent thymidylate synthase
translation: MNTDIEREDLLNKEYKVLDKGFIKLVDYMGSEERILNAARISYRGERIRRTDAELIDYLVRNEHTSPFEQVVFTFYIKAPIFVARQWMRHRTARINEVSGSYSFLREEFYVPLEEDLKIQNIESNQIEANFAKNVLSDLRESQKTCYKLYQDMINSNVSKEVSRIALPLSLYTEWYWQIDLNNLFHFIKLRLALNESKEVSENSSKEMSEYAKILLDVIEKLVPIATKSFKNHILKGCRLSYEEIIAISGALNISKLKLDDKALNRLKDKLNIK
SIO_010081: bpuSUM_RS08880
subclass of: SO_0000673
so part of: bpuSUM_RS08880
location: complement(742..1566)
location: region:742-1566:-1
so has part: feature:742-1566:-1:exon

WP_247068007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:742-1566:-1:exon

bpuSUM_RS08885
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08885
old locus tag: bpuSUM_001774
so part of: sequence
location: complement(1727..2614)
location: region:1727-2614:-1
so has part: feature:1727-2614:-1:exon
subclass of: SO_0000010

position:1727:-1
position: 1727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614:-1
position: 2614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1727-2614:-1:exon

bpuSUM_RS08885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08885
old locus tag: bpuSUM_001774
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P12 family lipoprotein
translation: MKRNILSVCMLALLCLLSCDMNALNDLLNEVREKVLDESKDNKYLNHEQGNQEQKEVVIDSLEEGVEIQQDMEVKPVNAGFEVFRQEYPYYPQEEVIKIEEKDLVPSTESEKEAQAEIEKVKGALGDSGFQQLIKNALELKDRCERGRADFYDIMGKIQSERISLTKKRKENIEKIRKLTQLQNKLNDERSNLERLMNEVEVGLNERSSAKYFFEDSEKILKEAITDRLRNNKRRSYWSRRGNGDFLARKARSNAESSLEQLESSSVKLIEAMAKIKEIEELISEAKSALGNLSR
SIO_010081: bpuSUM_RS08885
subclass of: SO_0000673
so part of: bpuSUM_RS08885
location: complement(1727..2614)
location: region:1727-2614:-1
so has part: feature:1727-2614:-1:exon

WP_247068000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1727-2614:-1:exon

bpuSUM_RS08890
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08890
old locus tag: bpuSUM_001775
pseudo: true
so part of: sequence
location: complement(3565..4632)
location: region:3565-4632:-1
so has part: feature:3565-4632:-1:exon
subclass of: SO_0000010

position:3565:-1
position: 3565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4632:-1
position: 4632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3565-4632:-1:exon

bpuSUM_RS08890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08890
old locus tag: bpuSUM_001775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633313.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08890
subclass of: SO_0000673
so part of: bpuSUM_RS08890
location: complement(3565..4632)
location: region:3565-4632:-1
so has part: feature:3565-4632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3565-4632:-1:exon

bpuSUM_RS08895
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08895
old locus tag: bpuSUM_001776
pseudo: true
so part of: sequence
location: complement(4757..5813)
location: region:4757-5813:-1
so has part: feature:4757-5813:-1:exon
subclass of: SO_0000010

position:4757:-1
position: 4757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5813:-1
position: 5813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4757-5813:-1:exon

bpuSUM_RS08895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08895
old locus tag: bpuSUM_001776
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683335.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08895
subclass of: SO_0000673
so part of: bpuSUM_RS08895
location: complement(4757..5813)
location: region:4757-5813:-1
so has part: feature:4757-5813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4757-5813:-1:exon

bpuSUM_RS08900
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08900
old locus tag: bpuSUM_001777
so part of: sequence
location: complement(5943..6980)
location: region:5943-6980:-1
so has part: feature:5943-6980:-1:exon
subclass of: SO_0000010

position:5943:-1
position: 5943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6980:-1
position: 6980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5943-6980:-1:exon

bpuSUM_RS08900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08900
old locus tag: bpuSUM_001777
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MYFFYFFIILLSCGSGTTSAEDPKTTFLNSIANLGKGFLDVFTSLSDMITGAFGIKAETKKSDIGNYFTSIEKAMNTVKEKLQDQVEKNGNYLKIKEVVDNFITNTLDKIADGAKTAATGATGNDAIGNATSAGHGATPADKDSVISLVKGIKTIVDLVLKDKGDAGATKTGEDDKKDVGNLFADANGKDDAKEENIAKASASIGSVTGADILQAIAKSTENPTANSTDGIEKATDAAEIAIAPAVNGKKEIKDAAKKDAVIAAGIALRAMAKDGKFAAKNEAKSAHAVNGATASAVGKTLSTLIIAIRNTVDSGLKTISDALATVTQEDKSVDSTTPAETAIGR
SIO_010081: bpuSUM_RS08900
subclass of: SO_0000673
so part of: bpuSUM_RS08900
location: complement(5943..6980)
location: region:5943-6980:-1
so has part: feature:5943-6980:-1:exon

WP_247068111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5943-6980:-1:exon

bpuSUM_RS08905
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08905
old locus tag: bpuSUM_001778
so part of: sequence
location: complement(7111..7749)
location: region:7111-7749:-1
so has part: feature:7111-7749:-1:exon
subclass of: SO_0000010

position:7111:-1
position: 7111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7749:-1
position: 7749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7111-7749:-1:exon

bpuSUM_RS08905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08905
old locus tag: bpuSUM_001778
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MMKRITLCALLMTLFLLLSCNNSGKNLKDDEVAKSDGSVIDLAKITKNITDSVAFAKDVKEVHSLVKSIDDLAKAIGAKIKDSYELDTTNSGHNGALLAGVFQVILTVETKLKSLKQSAKLPESLKAKVTAAEQSSKKFLDKLKGENAALGKEDASDADAKKAIDKNDNTGGKGKEELGELNTAIDALLTAADAAVTASINELTTSSKPANT
SIO_010081: bpuSUM_RS08905
subclass of: SO_0000673
so part of: bpuSUM_RS08905
location: complement(7111..7749)
location: region:7111-7749:-1
so has part: feature:7111-7749:-1:exon

WP_247068113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7111-7749:-1:exon

bpuSUM_RS08910
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08910
old locus tag: bpuSUM_001779
so part of: sequence
location: complement(7871..8932)
location: region:7871-8932:-1
so has part: feature:7871-8932:-1:exon
subclass of: SO_0000010

position:7871:-1
position: 7871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8932:-1
position: 8932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7871-8932:-1:exon

bpuSUM_RS08910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08910
old locus tag: bpuSUM_001779
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALFLTLFLLLSCGSGSTSAEDPKITFLNSIANLGKGFLDVFTSLSDMVTGAFGINAETKKSDIGNYFTSIETTMTSVKKKLQDQVAKNGNYSKLKTVVDTFITNTLDKIAAGAKEAAKGATGDVIGNATATGHGATPASKDSVVSLVKGIKTIVEVVLKKDEGDAGANKTGDDKKDVGNLFINDAGKDGSKEENIAKASASIGAVTGADILQAIANSKEDPQVDNANGIEKAKDAAEIAIVPAVNKTEIKEDSAKKDAVIAAGIALRAMAKDGKFAAKNEEKSANAVNGIAANAVGKTLRTLIIAIRNTVDSGLKTISDALATVTQEDKSLDSTTPADSATGSQQ
SIO_010081: bpuSUM_RS08910
subclass of: SO_0000673
so part of: bpuSUM_RS08910
location: complement(7871..8932)
location: region:7871-8932:-1
so has part: feature:7871-8932:-1:exon

WP_247068120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7871-8932:-1:exon

bpuSUM_RS08915
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08915
old locus tag: bpuSUM_001780
so part of: sequence
location: complement(9052..10143)
location: region:9052-10143:-1
so has part: feature:9052-10143:-1:exon
subclass of: SO_0000010

position:9052:-1
position: 9052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10143:-1
position: 10143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9052-10143:-1:exon

bpuSUM_RS08915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08915
old locus tag: bpuSUM_001780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633328.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MSCFYLVLSFNDNLDCLFLLLSCGSGTTKMEDPKATFLTSIANLGKGFLDVFTSLSDMITGALGIKAETKKSDIGKYFTSIEKTMTSVKKKLNIVVAENGNYPKLKEVVDTFITGTLDKIAEGAKTAATGAAGNAISEVVKSNAAGDGPDAESVKNLVKGIKQIVDLVIKEGNGQADKTTPADDDKKNIGKLFGAETADDKGAEEKHVAAASASIGAVTGADILQAIAAANADATKGGKVKEVKDAAGLALAKGTSTANDDQLTTAESKKDAVIAAGIALRAMAKDGKFIVKDTAEKKTEAESAKGVAASAVGKALSTLIIAIRNTVDTGLKSISDALAAVKQGDKSADFTTPAEAATTGQQQ
SIO_010081: bpuSUM_RS08915
subclass of: SO_0000673
so part of: bpuSUM_RS08915
location: complement(9052..10143)
location: region:9052-10143:-1
so has part: feature:9052-10143:-1:exon

WP_247068122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9052-10143:-1:exon

bpuSUM_RS08920
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08920
so part of: sequence
location: complement(10338..10484)
location: region:10338-10484:-1
so has part: feature:10338-10484:-1:exon
subclass of: SO_0000010

position:10338:-1
position: 10338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10484:-1
position: 10484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10338-10484:-1:exon

bpuSUM_RS08920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08920
inference: COORDINATES: protein motif:HMM:NF013599.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MLKNHGTKTKGAQEIDDLNTAITDLSKAAKEIVESAINELTSPVKSSN
SIO_010081: bpuSUM_RS08920
subclass of: SO_0000673
so part of: bpuSUM_RS08920
location: complement(10338..10484)
location: region:10338-10484:-1
so has part: feature:10338-10484:-1:exon

WP_247068124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10338-10484:-1:exon

bpuSUM_RS08925
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08925
old locus tag: bpuSUM_001781
so part of: sequence
location: complement(10430..10969)
location: region:10430-10969:-1
so has part: feature:10430-10969:-1:exon
subclass of: SO_0000010

position:10430:-1
position: 10430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10969:-1
position: 10969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10430-10969:-1:exon

bpuSUM_RS08925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08925
old locus tag: bpuSUM_001781
inference: COORDINATES: protein motif:HMM:NF013599.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKRITLCALLMTLFLLISCNTSGSATKDGQAAKSDGTLIDLKSASSKIKSANDLAVSIKEIEGLVKSIDELAKGIGKKVKNTGELEDNATHKDKNSAVVAGAYSIMLHISTKLTALKSKFDYDELKAKIGAAENLSTAFLEKVKRTMIFVKMTLLQSIHNKPYLKIMELKLKEHKRLMI
SIO_010081: bpuSUM_RS08925
subclass of: SO_0000673
so part of: bpuSUM_RS08925
location: complement(10430..10969)
location: region:10430-10969:-1
so has part: feature:10430-10969:-1:exon

WP_247068080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10430-10969:-1:exon

bpuSUM_RS08930
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08930
old locus tag: bpuSUM_001782
so part of: sequence
location: complement(11092..12138)
location: region:11092-12138:-1
so has part: feature:11092-12138:-1:exon
subclass of: SO_0000010

position:11092:-1
position: 11092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12138:-1
position: 12138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11092-12138:-1:exon

bpuSUM_RS08930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08930
old locus tag: bpuSUM_001782
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633355.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALLMTLFLLLSCGSGSASAEDPKTTFLNSIANLGKGFLDIFTSLSDMITGALGIKADTKKSDIGKYFSDIEKTMTSVKEKLQDEVEKNGNYVKLKSVVEHFITNTLDKIAEGAREAAKGAEGNDPIANVADQNAGAAGEEASVKSLSEGIGKIIGVVLRDKGNPEAGTDKKSDGLTVRTAAAGDGEAGKLFAANAGTAENAKKSAADVAKAVGAVTGADILQAMIKNDGVAAKLAKGNDGNAGAAPKDGTIAGAVALRSVAKGGKFAGPSDNANADAKKTVEDAALSAVTKALGTLTIAIRNTVDSGLKTISEALAAVKQEDKSVDSTTPVEAATGGQQQ
SIO_010081: bpuSUM_RS08930
subclass of: SO_0000673
so part of: bpuSUM_RS08930
location: complement(11092..12138)
location: region:11092-12138:-1
so has part: feature:11092-12138:-1:exon

WP_247068126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11092-12138:-1:exon

bpuSUM_RS08935
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08935
old locus tag: bpuSUM_001783
pseudo: true
so part of: sequence
location: complement(12261..13313)
location: region:12261-13313:-1
so has part: feature:12261-13313:-1:exon
subclass of: SO_0000010

position:12261:-1
position: 12261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13313:-1
position: 13313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12261-13313:-1:exon

bpuSUM_RS08935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08935
old locus tag: bpuSUM_001783
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696768.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08935
subclass of: SO_0000673
so part of: bpuSUM_RS08935
location: complement(12261..13313)
location: region:12261-13313:-1
so has part: feature:12261-13313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12261-13313:-1:exon

bpuSUM_RS08940
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08940
old locus tag: bpuSUM_001784
pseudo: true
so part of: sequence
location: complement(13438..14066)
location: region:13438-14066:-1
so has part: feature:13438-14066:-1:exon
subclass of: SO_0000010

position:13438:-1
position: 13438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14066:-1
position: 14066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13438-14066:-1:exon

bpuSUM_RS08940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08940
old locus tag: bpuSUM_001784
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633323.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: bpuSUM_RS08940
subclass of: SO_0000673
so part of: bpuSUM_RS08940
location: complement(13438..14066)
location: region:13438-14066:-1
so has part: feature:13438-14066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13438-14066:-1:exon

bpuSUM_RS08945
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08945
old locus tag: bpuSUM_001785
pseudo: true
so part of: sequence
location: complement(14184..>15188)
location: region:14184-15188:-1
so has part: feature:14184-15188:-1:exon
subclass of: SO_0000010

position:14184:-1
position: 14184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15188:-1
position: 15188
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14184-15188:-1:exon

bpuSUM_RS08945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08945
old locus tag: bpuSUM_001785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633324.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08945
subclass of: SO_0000673
so part of: bpuSUM_RS08945
location: complement(14184..>15188)
location: region:14184-15188:-1
so has part: feature:14184-15188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14184-15188:-1:exon

bpuSUM_RS08950
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08950
old locus tag: bpuSUM_001786
pseudo: true
so part of: sequence
location: complement(15287..>16258)
location: region:15287-16258:-1
so has part: feature:15287-16258:-1:exon
subclass of: SO_0000010

position:15287:-1
position: 15287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16258:-1
position: 16258
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15287-16258:-1:exon

bpuSUM_RS08950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08950
old locus tag: bpuSUM_001786
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539783.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08950
subclass of: SO_0000673
so part of: bpuSUM_RS08950
location: complement(15287..>16258)
location: region:15287-16258:-1
so has part: feature:15287-16258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15287-16258:-1:exon

bpuSUM_RS08955
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08955
old locus tag: bpuSUM_001787
so part of: sequence
location: complement(16510..17130)
location: region:16510-17130:-1
so has part: feature:16510-17130:-1:exon
subclass of: SO_0000010

position:16510:-1
position: 16510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17130:-1
position: 17130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16510-17130:-1:exon

bpuSUM_RS08955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08955
old locus tag: bpuSUM_001787
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633323.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MMKRITLCALFLTLFLLISCNTSGKNLTDDEVAKSDGTVIDLAKITKNIKDSVAFAKSVKEIHTLVKSIDELAKAIDQKVDNATHQLVDGAGEKNHNGSLIAGAFQVISTVKVALIALETEVGIPDTLKKKLGEAKAKSNEFLNKLEESKDQADAAKAIDIIKGDGSKGGNELKALNQLVGELLKTAEDAVESAIKELTTSVKPSN
SIO_010081: bpuSUM_RS08955
subclass of: SO_0000673
so part of: bpuSUM_RS08955
location: complement(16510..17130)
location: region:16510-17130:-1
so has part: feature:16510-17130:-1:exon

WP_247068128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16510-17130:-1:exon

bpuSUM_RS08960
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS08960
so part of: sequence
location: complement(17341..17895)
location: region:17341-17895:-1
so has part: feature:17341-17895:-1:exon
subclass of: SO_0000010

position:17341:-1
position: 17341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17895:-1
position: 17895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17341-17895:-1:exon

bpuSUM_RS08960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS08960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MQDSSLHSVESTQIFNGHVTEEIIYQEFVKMGMQDFIANDLSKRYYRNELTYRDIEYLESNFNLKLEMLERSLKSEVIFVKTELDNKIDSVENNLNAKIDTKFNELDNKIDTKFNELDNKIDNVRNEVSLVRKDMEINRMELDNKLDKTASEFKSTSRLHNWMFGTLITLNIGIFLALMSLLVK
SIO_010081: bpuSUM_RS08960
subclass of: SO_0000673
so part of: bpuSUM_RS08960
location: complement(17341..17895)
location: region:17341-17895:-1
so has part: feature:17341-17895:-1:exon

WP_247068082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17341-17895:-1:exon

bpuSUM_RS08965
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08965
old locus tag: bpuSUM_001790
so part of: sequence
location: complement(18196..19248)
location: region:18196-19248:-1
so has part: feature:18196-19248:-1:exon
subclass of: SO_0000010

position:18196:-1
position: 18196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19248:-1
position: 19248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18196-19248:-1:exon

bpuSUM_RS08965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08965
old locus tag: bpuSUM_001790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALLMTLFLLLSCGSGTTSAEDPKTTFLNSIANLGKGFLDVFTSLSDMVTGAFGINAETKKSDIGKYFTSIEKTMTSVKKKLNIVVAENGNYPKVKEVVDNFITDTLDKIAEGAKIAASGATTDTDIGGAPKEGQNAAPADTSSVNALVKGIGQIVEIVLKKDEGKADATKTGDTEKKSIGKLFGTKDADGAEAHAAAASASIGAVTGADILKAIARSGETADNSKNIEEAKDAASIASAKKEDDKKEIKEAARKDAVIAAGIALRAMAKDGKFAANQNAKDADAVNGVAANAVGKTLSTLIIAIRNTVDSGLRSISDALATVTQEDKSAEITTPADSTASGQ
SIO_010081: bpuSUM_RS08965
subclass of: SO_0000673
so part of: bpuSUM_RS08965
location: complement(18196..19248)
location: region:18196-19248:-1
so has part: feature:18196-19248:-1:exon

WP_247068130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18196-19248:-1:exon

bpuSUM_RS08970
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08970
old locus tag: bpuSUM_001791
pseudo: true
so part of: sequence
location: complement(19363..>20364)
location: region:19363-20364:-1
so has part: feature:19363-20364:-1:exon
subclass of: SO_0000010

position:19363:-1
position: 19363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20364:-1
position: 20364
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19363-20364:-1:exon

bpuSUM_RS08970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08970
old locus tag: bpuSUM_001791
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633324.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08970
subclass of: SO_0000673
so part of: bpuSUM_RS08970
location: complement(19363..>20364)
location: region:19363-20364:-1
so has part: feature:19363-20364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19363-20364:-1:exon

bpuSUM_RS08975
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08975
old locus tag: bpuSUM_001792
so part of: sequence
location: complement(20463..21557)
location: region:20463-21557:-1
so has part: feature:20463-21557:-1:exon
subclass of: SO_0000010

position:20463:-1
position: 20463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21557:-1
position: 21557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20463-21557:-1:exon

bpuSUM_RS08975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08975
old locus tag: bpuSUM_001792
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MRRHVIMKRITLCALLITLFLFLSCGSGHQSAMGGGAATGGSSLSSVLMDIGRSAENAFYSFLELLSDTLGFTAKSTTKKNDVGSYFNGLGEKLGVASEELEQVAVKATAGVDTSDASKDPIRVAIETAKATLITLKTHLESLKDIGDGNIVGHAHNAQGAGTKADDAESNKFLKALQEIVKVATDVGVTALKAGATTLQANGGEDNKDGAKILATSAGNPAAADVAKAAAILATVSGEEILASIVASQEGDVKAVTAAATANTTSLEFAKGGTADNLAKDTAKAAAVAGGIALRSLVKTGKLAAGAADNATGGEKEVQGVGITAVNKLLVAVEDIIKKTVKNVLEKAKGEIDKARAPKTAAHQ
SIO_010081: bpuSUM_RS08975
subclass of: SO_0000673
so part of: bpuSUM_RS08975
location: complement(20463..21557)
location: region:20463-21557:-1
so has part: feature:20463-21557:-1:exon

WP_247068132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20463-21557:-1:exon

bpuSUM_RS08980
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08980
old locus tag: bpuSUM_001793
so part of: sequence
location: complement(21657..22766)
location: region:21657-22766:-1
so has part: feature:21657-22766:-1:exon
subclass of: SO_0000010

position:21657:-1
position: 21657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22766:-1
position: 22766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21657-22766:-1:exon

bpuSUM_RS08980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08980
old locus tag: bpuSUM_001793
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALLMTLFLLLSCGSGSGSGSGSGSGSASASAEDPKTTFLDSLVKIGHGFQEVFGIFGNAIGDALGLTAVKSGDKKSKVGEHFKTIGDGLSTTKEKLKALSDKISEAKNANISTIDAVKSAISSASDVFERLISSVTKLSGITNDGADIGDNANAVPGADEKAGVEAIIAGVRDIIGAADKSGVKIESGNSGGPIATAANTTDALAVLGGNTANASAGAGDKLASEVAKADPWAIIDKIKNAKATDGIQLDAGEKDAGILAASNNNASANAGAKSNADLVAAVALKAITKGGKFSANAADTDAVKAAALSAVNKVLGILDLIIRKTVASELDKIRKAVKGIQYFETTTESTETSAIQPTVVK
SIO_010081: bpuSUM_RS08980
subclass of: SO_0000673
so part of: bpuSUM_RS08980
location: complement(21657..22766)
location: region:21657-22766:-1
so has part: feature:21657-22766:-1:exon

WP_247068134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21657-22766:-1:exon

bpuSUM_RS08985
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08985
old locus tag: bpuSUM_001794
pseudo: true
so part of: sequence
location: complement(22884..23907)
location: region:22884-23907:-1
so has part: feature:22884-23907:-1:exon
subclass of: SO_0000010

position:22884:-1
position: 22884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23907:-1
position: 23907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22884-23907:-1:exon

bpuSUM_RS08985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08985
old locus tag: bpuSUM_001794
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633351.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08985
subclass of: SO_0000673
so part of: bpuSUM_RS08985
location: complement(22884..23907)
location: region:22884-23907:-1
so has part: feature:22884-23907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22884-23907:-1:exon

bpuSUM_RS08990
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08990
old locus tag: bpuSUM_001795
so part of: sequence
location: complement(24044..24673)
location: region:24044-24673:-1
so has part: feature:24044-24673:-1:exon
subclass of: SO_0000010

position:24044:-1
position: 24044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24673:-1
position: 24673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24044-24673:-1:exon

bpuSUM_RS08990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08990
old locus tag: bpuSUM_001795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKRITLCALFLTLFLLSSCNTSGNATKDGQAAKSDGTVIDLVTITNNIKDSVAFAKSVKEIHTLVKSIDELAKAIGKKIKNDDTLDTMDGKNGSLLAGAFQIISTVKSKLGTLAKTNELSDELKQKVNAATAANTSLLNKLKEKNADLGKEGASDADAKAAILVSNGTKDKGVDELIKLNTAIDALLTAADAAVTSAIKELTTPAKPSN
SIO_010081: bpuSUM_RS08990
subclass of: SO_0000673
so part of: bpuSUM_RS08990
location: complement(24044..24673)
location: region:24044-24673:-1
so has part: feature:24044-24673:-1:exon

WP_247068084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24044-24673:-1:exon

bpuSUM_RS08995
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS08995
so part of: sequence
location: complement(24892..25404)
location: region:24892-25404:-1
so has part: feature:24892-25404:-1:exon
subclass of: SO_0000010

position:24892:-1
position: 24892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25404:-1
position: 25404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24892-25404:-1:exon

bpuSUM_RS08995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS08995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MQDSSLHSVESTQIFNGHITEEIIYQEFVKMGMQDFIANDLSKRYYRNELTYRDIEYLESNFNLKLEMLERSLKSEIISVKTELDNKIDIIRNELKSDIKDLDNKIDIVESNLNVKIDTKFNELDTKIDVNKMELKSTLRLHGWMFGTIITLNIGIFLTLISIVYSLLNR
SIO_010081: bpuSUM_RS08995
subclass of: SO_0000673
so part of: bpuSUM_RS08995
location: complement(24892..25404)
location: region:24892-25404:-1
so has part: feature:24892-25404:-1:exon

WP_247068086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24892-25404:-1:exon

bpuSUM_RS09000
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09000
pseudo: true
so part of: sequence
location: complement(25718..>25955)
location: region:25718-25955:-1
so has part: feature:25718-25955:-1:exon
subclass of: SO_0000010

position:25718:-1
position: 25718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25955:-1
position: 25955
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25718-25955:-1:exon

bpuSUM_RS09000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683290.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09000
subclass of: SO_0000673
so part of: bpuSUM_RS09000
location: complement(25718..>25955)
location: region:25718-25955:-1
so has part: feature:25718-25955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25718-25955:-1:exon

bpuSUM_RS09005
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09005
old locus tag: bpuSUM_001799
so part of: sequence
location: complement(26135..26293)
location: region:26135-26293:-1
so has part: feature:26135-26293:-1:exon
subclass of: SO_0000010

position:26135:-1
position: 26135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26293:-1
position: 26293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26135-26293:-1:exon

bpuSUM_RS09005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09005
old locus tag: bpuSUM_001799
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDTNGKLKGLSGEISNAKNSNSNTIEAVKSAIGSAGDFFEQLINSVNKYPV
SIO_010081: bpuSUM_RS09005
subclass of: SO_0000673
so part of: bpuSUM_RS09005
location: complement(26135..26293)
location: region:26135-26293:-1
so has part: feature:26135-26293:-1:exon

WP_247068089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26135-26293:-1:exon

bpuSUM_RS09010
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09010
old locus tag: bpuSUM_001800
so part of: sequence
location: complement(26562..27620)
location: region:26562-27620:-1
so has part: feature:26562-27620:-1:exon
subclass of: SO_0000010

position:26562:-1
position: 26562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27620:-1
position: 27620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26562-27620:-1:exon

bpuSUM_RS09010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09010
old locus tag: bpuSUM_001800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633313.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MVSYFCLLLLLSCGSGQQSFDSAKGGGAATGGRTLSSVLMDVGRSAENAFYSFLELLSGTLGLRVTKDTKKSDVGDYFNSLGAKIGEASKELEEVAKKSEIGVDKGDSSKNLIKEAVDAAKATLITLKTHLESLGTVGDSQKVGDAASNQQGVAAADVELKKAFKALQGIVDTAGKEGVERPRAGDIAVKVGNGTDNKDGAKILGTDLAATATDAGKAAAILSTVSGEEMLASIVKSGESDVALTANATAQTSAISFAKGGNAAHLAGANTPKAAAVAGGIALRSLVKDGKLAAAAADAQGGQGEVQAVGVTAVNKLLVAVEELIKKTVKNVLGKSKEKIDEAREPKSANQQ
SIO_010081: bpuSUM_RS09010
subclass of: SO_0000673
so part of: bpuSUM_RS09010
location: complement(26562..27620)
location: region:26562-27620:-1
so has part: feature:26562-27620:-1:exon

WP_247068091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26562-27620:-1:exon

bpuSUM_RS09015
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09015
old locus tag: bpuSUM_001801
so part of: sequence
location: complement(27845..28477)
location: region:27845-28477:-1
so has part: feature:27845-28477:-1:exon
subclass of: SO_0000010

position:27845:-1
position: 27845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28477:-1
position: 28477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27845-28477:-1:exon

bpuSUM_RS09015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09015
old locus tag: bpuSUM_001801
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKRITLCALLITLFLLISCNSSGNATKDGHAAKSDGTLIDLSAISSNITEAVAFAKSVKEVHTLVKSIDTLAKAIGKKIQNGDTLGTDANHNGSLVAGAYSVIEAVETKLTSLEKKVGLSSDLKGKVTAAKNESTSFLTKIKGQNSDLGKEGVTDVHAKSSIDVTDSTKDKGAEELGKLNTAIDALLKAAETAVTAAIKELTSPTKPSNT
SIO_010081: bpuSUM_RS09015
subclass of: SO_0000673
so part of: bpuSUM_RS09015
location: complement(27845..28477)
location: region:27845-28477:-1
so has part: feature:27845-28477:-1:exon

WP_247068093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27845-28477:-1:exon

bpuSUM_RS09020
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09020
so part of: sequence
location: complement(28676..29371)
location: region:28676-29371:-1
so has part: feature:28676-29371:-1:exon
subclass of: SO_0000010

position:28676:-1
position: 28676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29371:-1
position: 29371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28676-29371:-1:exon

bpuSUM_RS09020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MGLAQPVVTQQMVIAELTRAGINRDIAIDLSYRYYKNELTYKDIEYLETTFNLKLEKVEATLQADIRDLDNKIDNVKNELKSDIRDLDNKIDSVENNLNIKIDTKFNELDNKIETVRSELKSDIRDLNNKIDAVENNLNNKIDAIENNLNNKIDTKFNELDTKIDNVRNEVSLVRKDMEINRVELDSKLDKTASEFKSTLRLHGWMFGTLITLNIGIFLTLMTIVYSLLNK
SIO_010081: bpuSUM_RS09020
subclass of: SO_0000673
so part of: bpuSUM_RS09020
location: complement(28676..29371)
location: region:28676-29371:-1
so has part: feature:28676-29371:-1:exon

WP_247068095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28676-29371:-1:exon

bpuSUM_RS09025
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09025
old locus tag: bpuSUM_001803
pseudo: true
so part of: sequence
location: complement(29660..30725)
location: region:29660-30725:-1
so has part: feature:29660-30725:-1:exon
subclass of: SO_0000010

position:29660:-1
position: 29660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30725:-1
position: 30725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29660-30725:-1:exon

bpuSUM_RS09025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09025
old locus tag: bpuSUM_001803
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633353.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09025
subclass of: SO_0000673
so part of: bpuSUM_RS09025
location: complement(29660..30725)
location: region:29660-30725:-1
so has part: feature:29660-30725:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29660-30725:-1:exon

bpuSUM_RS09030
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09030
old locus tag: bpuSUM_001804
so part of: sequence
location: complement(30840..31907)
location: region:30840-31907:-1
so has part: feature:30840-31907:-1:exon
subclass of: SO_0000010

position:30840:-1
position: 30840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31907:-1
position: 31907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30840-31907:-1:exon

bpuSUM_RS09030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09030
old locus tag: bpuSUM_001804
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALFLTLFLLLSCGSGTTSAEDPKTTFLNSLVNIGHGFYEIFGIFGNAIGDALGLTAVKSGDKRSKVGEHFKTIGNGLTTTKNKLKELSDEISGTKNANSSTIDTVKGAISSASDVFEQLIEALTTLASVTNDSAEIGDTSNNAAAVAADENSVKTIIENVKTIIDVADKSDVKIEKGSEGNAVNAAANTDAPAVLTHNAAAGANAGPKLAAEVSKADPWAMIDKIKDSTVNTGVLTAATNYGAGELATGGVVANGAGAKTNADLAAAVALKAMTKTGKFSAAANEDGAVKAAAVSAVNKVLGILDIIIKKTVASELDKVGKAVKGIQYSETTTESTEASSTQHTATK
SIO_010081: bpuSUM_RS09030
subclass of: SO_0000673
so part of: bpuSUM_RS09030
location: complement(30840..31907)
location: region:30840-31907:-1
so has part: feature:30840-31907:-1:exon

WP_247068135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30840-31907:-1:exon

bpuSUM_RS09035
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09035
so part of: sequence
location: complement(32088..32642)
location: region:32088-32642:-1
so has part: feature:32088-32642:-1:exon
subclass of: SO_0000010

position:32088:-1
position: 32088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32642:-1
position: 32642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32088-32642:-1:exon

bpuSUM_RS09035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS09035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MRLAQPVITQQMVIAELTRAGINRDIAIDLSYRYYKNELTYKDIEYLETTFNLKLEKVESLLQAEIKSVKTELDTKIDTKFNDLDNKIDIVRNELKSDIRDLDTKIDNVRSELKSDIKDLDTKIDSVENNLNIKIDTKFNELDNKIDVNKMELKSTLRLHGWMFGTLITLNIGIFLALMSLLVK
SIO_010081: bpuSUM_RS09035
subclass of: SO_0000673
so part of: bpuSUM_RS09035
location: complement(32088..32642)
location: region:32088-32642:-1
so has part: feature:32088-32642:-1:exon

WP_247068097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32088-32642:-1:exon

bpuSUM_RS09040
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09040
old locus tag: bpuSUM_001806
pseudo: true
so part of: sequence
location: complement(32931..>33202)
location: region:32931-33202:-1
so has part: feature:32931-33202:-1:exon
subclass of: SO_0000010

position:32931:-1
position: 32931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33202:-1
position: 33202
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32931-33202:-1:exon

bpuSUM_RS09040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09040
old locus tag: bpuSUM_001806
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633328.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09040
subclass of: SO_0000673
so part of: bpuSUM_RS09040
location: complement(32931..>33202)
location: region:32931-33202:-1
so has part: feature:32931-33202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32931-33202:-1:exon

bpuSUM_RS09045
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09045
old locus tag: bpuSUM_001808
so part of: sequence
location: 33512..34618
location: region:33512-34618:1
so has part: feature:33512-34618:1:exon
subclass of: SO_0000010

position:33512:1
position: 33512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34618:1
position: 34618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33512-34618:1:exon

bpuSUM_RS09045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09045
old locus tag: bpuSUM_001808
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MKDTKKTTNKHQHKLIVLISTLNYMNLKFKKYIQSDILYYFNNNMKKNGYKPTKIKTIQNYLYKLEKVLGVTINYHRHLGVNMGTEIHYKLKYSKKECYRIINKHFREKKEKRHQKRVSAYFEKTCTKNSSVEKEECYYNTYNNKEEDKNKKTIEKLQIGKYAKKCNFKSNTFFSILNLKIEKNTKIEVLKVLKRTENFIEKSIYKKQKDTKLRIGKFKNKQQELSKILKETKISLENEGYNSEQLETQIQNVYYQYRHKPHFIIENEKYNDLKKILDKLKNSAELIKANIKEDGKDIKNNVFSILLDQLKHKIKTSVLIPILKDYLNKQNILTYSKVFNNHYYYELLDILNDNKDYLKSGEFERNYS
SIO_010081: bpuSUM_RS09045
subclass of: SO_0000673
so part of: bpuSUM_RS09045
location: 33512..34618
location: region:33512-34618:1
so has part: feature:33512-34618:1:exon

WP_247068099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33512-34618:1:exon

bpuSUM_RS09050
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09050
old locus tag: bpuSUM_001809
so part of: sequence
location: 34628..35188
location: region:34628-35188:1
so has part: feature:34628-35188:1:exon
subclass of: SO_0000010

position:34628:1
position: 34628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35188:1
position: 35188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34628-35188:1:exon

bpuSUM_RS09050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09050
old locus tag: bpuSUM_001809
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MDSVLERLKKKKLEIKEKRDKPIFVKIENKNNKTFYHTKIMKDLYVFGINKNQKNKFFISFRELFNQERIEFFHLFSLRNDDKFLGIFYGYRKPIKNVITRYEENGVMKTSTFSKAYYIEFRFKKGSVFCYLKEISYLLKKDKSDTKYSKSLIEKLAKLEKQIYEFYGKNSKDGSLINKWIQKRQK
SIO_010081: bpuSUM_RS09050
subclass of: SO_0000673
so part of: bpuSUM_RS09050
location: 34628..35188
location: region:34628-35188:1
so has part: feature:34628-35188:1:exon

WP_247068102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34628-35188:1:exon

bpuSUM_RS09055
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09055
old locus tag: bpuSUM_001810
so part of: sequence
location: 35164..35925
location: region:35164-35925:1
so has part: feature:35164-35925:1:exon
subclass of: SO_0000010

position:35164:1
position: 35164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35925:1
position: 35925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35164-35925:1:exon

bpuSUM_RS09055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09055
old locus tag: bpuSUM_001810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDTKKTKVITLASIKGGVGKSVSSIIFATLLAQKYKVLLIDMDTQASTTSYYSGKLAKLDVSLIDKNIYEVLKTNLSINNARFVIDENLDLIPSYLSLHQFNIEPIPFKEMKLKKQLKQLEIDYDYIVIDTNPSLDFTLINALVCSDYIVVPMTAEKWAVESLDLFEFFVSKLDLSLSVFLLVTRFRKNNTHKYLLDILKSKSNFLGTISEREDLNKRIAGDSTFDLNRDYIHEYQKALDIFLKEIYQKINVH
SIO_010081: bpuSUM_RS09055
subclass of: SO_0000673
so part of: bpuSUM_RS09055
location: 35164..35925
location: region:35164-35925:1
so has part: feature:35164-35925:1:exon

WP_247068105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35164-35925:1:exon

bpuSUM_RS09060
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09060
old locus tag: bpuSUM_001811
so part of: sequence
location: 35957..36499
location: region:35957-36499:1
so has part: feature:35957-36499:1:exon
subclass of: SO_0000010

position:35957:1
position: 35957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36499:1
position: 36499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35957-36499:1:exon

bpuSUM_RS09060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09060
old locus tag: bpuSUM_001811
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MKIKLNKRALEGRNLSDHEKILTHYNKLKEKLIINFKDEIYSKIETMKVLKEIKDKGYYKLDGYKNFVDFILNFNLAKTQVYNYLKIASAMEKGLINDDFILKNGFNQTLFFIKTNDNLTLKKSKQNTIKPLRFQLKNQESYDFYKKNAKFTGFILDKLFLSKKDLLEDFMKEFRGLKGD
SIO_010081: bpuSUM_RS09060
subclass of: SO_0000673
so part of: bpuSUM_RS09060
location: 35957..36499
location: region:35957-36499:1
so has part: feature:35957-36499:1:exon

WP_247068107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35957-36499:1:exon

bpuSUM_RS09065
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09065
pseudo: true
so part of: sequence
location: <38091..>38411
location: region:38091-38411:1
so has part: feature:38091-38411:1:exon
subclass of: SO_0000010

position:38091:1
position: 38091
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:38411:1
position: 38411
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38091-38411:1:exon

bpuSUM_RS09065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539526.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS09065
subclass of: SO_0000673
so part of: bpuSUM_RS09065
location: <38091..>38411
location: region:38091-38411:1
so has part: feature:38091-38411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38091-38411:1:exon

bpuSUM_RS09070
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS09070
old locus tag: bpuSUM_001813
so part of: sequence
location: complement(38723..45730)
location: region:38723-45730:-1
so has part: feature:38723-45730:-1:exon
subclass of: SO_0000010

position:38723:-1
position: 38723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45730:-1
position: 45730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38723-45730:-1:exon

bpuSUM_RS09070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS09070
old locus tag: bpuSUM_001813
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQQTKILKGLLNDEEKTALAFLQYSITKPNPDNYQFLTLAHGIPSKVILNLNIDKLKSILSNIIPTLKAKKEAEDFLANYNGLLKDKFIQILKIATTQYIYFVKTTCSNPNFDEIYHKLTTINNSDTFENIINTIKDYNNVTEQLSNDEKEALTFLNSITKLNPNNPNDQSIITNINENLNKLILNLSTDQLKSILSNIILTLKAKKEAKDSLDNYNNPLKDILTKILKDTSIQFTDLLISICNTPNFDEMHHNLSKINNADTFENIINTIKHYNNVTEQLSNDEKEALSFLKYSIIKPNPDDSSNHSIITNAQVNLHKLILNTDIDKLKSMLSNIILILKTKKEAENSLANYNGTLKDTFIQRLENASTQFTYLLINICHTSNFDEIHHNLSTINNADIFENIINTIKHYNNVIKQHLNNDEKEALVILGNSIETQIKRINKITTTEQISLSKFIINLSTDQLKSILSNIILILKTKKEAEDSLENYNGPLKNTFIKKLENASIQFIKLLKGTYNASNFDTMYHHLSITNAYLFKDITSNIEGYNNVIKQLNNEEQETLTSLANLITKPNPNDPNDHNVITNTQASLNKLILNLSIDKLKLILSNIIPTLKAKKEAEDSLTNYNDPLKNTLTKKLEDVTTQVINTLRSIYNTPNFDEIYHNLSTTNNTAQLFESVASDIKNYNNIIKQLNDDEKGALTFLENSITKPNPNDPNDHNIITNTQASLNKLILNLSIDKLKLILSNIIPTLKAKIYAENSIINHDDPLKNTLIKVLEDAITQYTNTLKNICNTLDFDEIYRNLLTTNNTAYLFEAIASDIKDYNNVIKQLNDDEKGALIFLQYSIIKPNPDDSDDHNITIDEQEKFDNLILNLNVANIKVILLNMIPTLKAKKEAEDSLTNYNRPLLKNTFIQILKTVTTQYIQYLKNMCYYTGLNKMHCNLSTINKTTYLFEAIAKAIQHYNNNIEQLSDDEKESLIFLQYSITKPNSDDLDDYNSTIGEKEKFNNIILNLNIDRLKPILSNIILTLKAKKEAEDSLENYNGPLKDTFTQRVNTATTQYIYNLKNMCSYTGLNEIHCNLLTINNANVFKNIVNDIKNYNNIIEQLNDDEKEALSFLKYSITKPNPVDPDEYNITINAQENLHKLTLNSDIDKFKSILSNIILTLKAKKEAENTLENYNGPLKDTLTKILENAIALYENLLKIIFNTPDFDEMYNNLSITNNANTFENIINDIKIYNSTTEQLNDDEKGALSFLKYSITKPNPIDPDYDNFIIYAQINLHKLILKSDIDKLKKAISDIVTTLDSKKDVEDYLRVYTGPSKDTLTQMLKDTIALYENHLKSLCKTSSFDKMYNNLSTTNNANIFENIVNDIKNYNNIIEQLNDNEKGALTFLENSITKPNPDDLSDHSIIMHAQSNLHRLIINFDIDKLKQAIAGIVITLNTKKEAEDSLENYNEPLKDTLTKMLKDTTTSYANHLKNLCKASSLDEIYGNLSTATNNANIFENIVNDIKNYNNTIEQLNVDEKESLTFLENFITKPNPDDSSEHNIITHAQVNLHKLILNSDIDKFKSILSNIIPTLKVKKEAEDSLQNYNGPLKDTLTKMLKDATKSYANHLKSICNTPDFNEMYNNLSTTNNTSHLFENIIRIIKNYNNTTEQLNVDEKEALTFLKYSITKPNPYDPNNHNIIINAQKKFDKLILNFDTDKLKLILSNIIPTLKVKKEAEDSLQNYNGPLKNTFTKKLEKSITSYANHLKNTFNTVDIEWLDLYLYITPPKDHTSTFEHIVSNIELFNSVTEQLNVDEKEALSFLENSIIKPNPDDSSDHSIITNAQENLHKLILNTDIDKLKSMLSNIILTLKVKKEAENSLANYNGTLKDKLTQRANSATTQYIQYLKNSCNTSLDKIHSNLSTINNTSLFQDIINNIKLLNSVTEQLNDDEKEALSFLENSIIKPNPDDSSDHSIITNAQENLHKLILNLDIDKLKSMLSNIILTLKVKKEAENSLA…
SIO_010081: bpuSUM_RS09070
subclass of: SO_0000673
so part of: bpuSUM_RS09070
location: complement(38723..45730)
location: region:38723-45730:-1
so has part: feature:38723-45730:-1:exon

WP_247068109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38723-45730:-1:exon