Borrelia puertoricensis strain SUM plasmid lp41, complete sequence.
type: Entry
definition: Borrelia puertoricensis strain SUM plasmid lp41, complete sequence.
sequence version: NZ_CP075397.1
sequence date: 2022-05-23
sequence: sequence
division: CON
label: NZ_CP075397.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN19000909
keyword: RefSeq
source: Borrelia puertoricensis
organism: Borrelia puertoricensis
taxonomy: Bacteria; Spirochaetes; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP075397.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1138.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/23/2022 17:07:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.1\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 1,976\nCDSs (total) :: 1,938\nGenes (coding) :: 1,830\nCDSs (with protein) :: 1,830\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 108\nCDSs (without protein) :: 108\nPseudo Genes (ambiguous residues) :: 0 of 108\nPseudo Genes (frameshifted) :: 72 of 108\nPseudo Genes (incomplete) :: 37 of 108\nPseudo Genes (internal stop) :: 24 of 108\nPseudo Genes (multiple problems) :: 23 of 108\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 41322
topology: linear
so has quality: SO_0000987
location: 1..41322
location: region:1-41322:1
RO_0002162: 2756107

NZ_CP075397
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN19000909
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Kneubehl, A.R.
author: Lopez, J.
journal: Submitted (17-MAY-2021) Pediatrics-Tropical Medicine, Baylor College of Medicine, 1102 Bates Ave, Houston, TX 77030, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41322:1
position: 41322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-41322:1:source
so part of: sequence
organism: Borrelia puertoricensis
mol type: genomic DNA
strain: SUM
isolation source: tick
host: Alectorobius puertoricensis
type material: type strain of Borrelia puertoricensis
plasmid: lp41
country: Panama
collection date: 2019-01-01

2756107
type: Taxonomy
SIO_000068: taxonomy

bpuSUM_RS08690
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08690
old locus tag: bpuSUM_001731
so part of: sequence
location: 1122..1892
location: region:1122-1892:1
so has part: feature:1122-1892:1:exon
subclass of: SO_0000010

position:1122:1
position: 1122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892:1
position: 1892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1122-1892:1:exon

bpuSUM_RS08690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08690
old locus tag: bpuSUM_001731
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDKKRTKIITIASIKGGVGKSTSAILFSTILSKKFSVLLIDMDAQASLTSYFNEYLEKTRINVENINIYEILQKNLDINNSICNINQNLDFIPSYLNLHFFNNDNLPFKETRLKKALYFIKNTYDYIIIDTNPSLDFTLINALVVSNFVISPIPAEKWSIESLEALNFKVKQLDLNLPIYILNTRLKNNNSNKFYLDILKQNSNFIGSIREREDLNKRIAQNIGFSLNEDYISDYKKALKNLFGAEQISGRSYEEK
SIO_010081: bpuSUM_RS08690
subclass of: SO_0000673
so part of: bpuSUM_RS08690
location: 1122..1892
location: region:1122-1892:1
so has part: feature:1122-1892:1:exon

WP_247068056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1122-1892:1:exon

bpuSUM_RS08695
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08695
old locus tag: bpuSUM_001732
so part of: sequence
location: 1879..2451
location: region:1879-2451:1
so has part: feature:1879-2451:1:exon
subclass of: SO_0000010

position:1879:1
position: 1879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2451:1
position: 2451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1879-2451:1:exon

bpuSUM_RS08695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08695
old locus tag: bpuSUM_001732
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MKKNKFKLNKRIIEKNNSLQKNTNDINIQTYEKLKAKLKINLQEDIYNKIETMKILKEINDKKLFKLDGYKNFSTFIKNYNLARTQVYAYLAIAEGLKNNLINEESIIEKGIMNTYFFLSTKETQKKQKTSNLIKSIKLKLKNQDAYNFYKTNQQFTCFLMERIFIQDKEYIKKIKKDFEKSLAKSKKQT
SIO_010081: bpuSUM_RS08695
subclass of: SO_0000673
so part of: bpuSUM_RS08695
location: 1879..2451
location: region:1879-2451:1
so has part: feature:1879-2451:1:exon

WP_247068022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1879-2451:1:exon

bpuSUM_RS08700
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08700
old locus tag: bpuSUM_001733
so part of: sequence
location: 2592..3359
location: region:2592-3359:1
so has part: feature:2592-3359:1:exon
subclass of: SO_0000010

position:2592:1
position: 2592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3359:1
position: 3359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2592-3359:1:exon

bpuSUM_RS08700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08700
old locus tag: bpuSUM_001733
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MKILKKSHNKEQKKFNKHQHKLIVLISTLNYMNLNLKKYTQSNILYYFNNNLKRNGQKIIKIKTLQSYLYKLEKELQITINYYKHLGKNYGTEIYYQLKYPKNKCYHKINLYFKIKREKKFNERVHKYLCSKNINEEKWECISNIYNNIYNMKTKEKLNKTHKNHKYKTNKLSTNKKYKDQNKTIKSIKGLNKNTKDNIRNNIFSILLEQLKQKADTKTLVPILKHYLDKTNNLNYDKIINNQYYYDLLEILGKS
SIO_010081: bpuSUM_RS08700
subclass of: SO_0000673
so part of: bpuSUM_RS08700
location: 2592..3359
location: region:2592-3359:1
so has part: feature:2592-3359:1:exon

WP_247068024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2592-3359:1:exon

bpuSUM_RS08705
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08705
old locus tag: bpuSUM_001734
so part of: sequence
location: 3389..3961
location: region:3389-3961:1
so has part: feature:3389-3961:1:exon
subclass of: SO_0000010

position:3389:1
position: 3389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3961:1
position: 3961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389-3961:1:exon

bpuSUM_RS08705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08705
old locus tag: bpuSUM_001734
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010258127.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MDNLFKQLKKKAKTLKLNTSQANVKNIFDKIEKIEGKKIYHTKLFNDFYIFGVNRKQKQKFLIALKKYSNPNKEKKIYTFHLFSVKEKDDFLGIRYSIKKIQKPLIITNTEKNESYTIRWCVCMEFRFKTGSIICYLTNFYSLLRKDKINTEYYKKLLNITLEIEKQVYAFYNKNLTGEIITKWIEKKQK
SIO_010081: bpuSUM_RS08705
subclass of: SO_0000673
so part of: bpuSUM_RS08705
location: 3389..3961
location: region:3389-3961:1
so has part: feature:3389-3961:1:exon

WP_247068026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3389-3961:1:exon

bpuSUM_RS08710
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08710
old locus tag: bpuSUM_001735
so part of: sequence
location: 5257..5874
location: region:5257-5874:1
so has part: feature:5257-5874:1:exon
subclass of: SO_0000010

position:5257:1
position: 5257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5874:1
position: 5874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5257-5874:1:exon

bpuSUM_RS08710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08710
old locus tag: bpuSUM_001735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486448.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nicotinamidase
translation: MGRTSFSLNLKKAALILVDIQNDFLESGTLSVPQGNEIIPLINQLQKYFEHIVATKDWHCENHVSFLSDSNCQGWPKHCVKNTWGAEFPKDLNIDKVKAVFLKGQDENYDSYSGFYDDSCKKKLTGLLDYLQFNGIDAVFIVGLALDFCVKETIIDAHNLGFRSYLITDATRSISSFPELIIMELEKLGILTCLARDIFNNFSLL
SIO_010081: bpuSUM_RS08710
subclass of: SO_0000673
so part of: bpuSUM_RS08710
location: 5257..5874
location: region:5257-5874:1
so has part: feature:5257-5874:1:exon

WP_247068058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5257-5874:1:exon

bpuSUM_RS08715
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08715
old locus tag: bpuSUM_001736
so part of: sequence
location: 6069..7001
location: region:6069-7001:1
so has part: feature:6069-7001:1:exon
subclass of: SO_0000010

position:6069:1
position: 6069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7001:1
position: 7001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6069-7001:1:exon

bpuSUM_RS08715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08715
old locus tag: bpuSUM_001736
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539340.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVKINFSGIVICLFITLNGCSVDKKDNVSIRSYEDGLNLLLDSNYFEQNDTHVDKSVWQHAKDSKKQIGKNNLNQTDIDNNDQGAIKKGVLNDYIDDQEVAKVDILEVERLNGYLLQDSALFPVQSDIDCIGERVIVNEDFEHNNMVSKIILEQDSLESCKKRLENNLNEVQKEALEFLEKALASKVDKLNRILVLDEDEIKNMLNIISRNLNSIRELESVNELILDFENLDNGELTFKMNDEVKVEYTEVKNDLREKIELSLDDYLSVIDAHFNDDDIRSSVDNINSIEILSPSFDYKFSESSLIRED
SIO_010081: bpuSUM_RS08715
subclass of: SO_0000673
so part of: bpuSUM_RS08715
location: 6069..7001
location: region:6069-7001:1
so has part: feature:6069-7001:1:exon

WP_247068029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6069-7001:1:exon

bpuSUM_RS08720
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08720
old locus tag: bpuSUM_001737
so part of: sequence
location: 7999..8268
location: region:7999-8268:1
so has part: feature:7999-8268:1:exon
subclass of: SO_0000010

position:7999:1
position: 7999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8268:1
position: 8268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7999-8268:1:exon

bpuSUM_RS08720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08720
old locus tag: bpuSUM_001737
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVIKFPKRKSLKSEQMDIEDFMAQVDYTTAQLDREFRDFQEQYGADKGLDDWMVHVEKETQLKNQKIQVRSKTLSLLFEKKLNDNKNK
SIO_010081: bpuSUM_RS08720
subclass of: SO_0000673
so part of: bpuSUM_RS08720
location: 7999..8268
location: region:7999-8268:1
so has part: feature:7999-8268:1:exon

WP_247068031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7999-8268:1:exon

bpuSUM_RS08725
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08725
old locus tag: bpuSUM_001738
so part of: sequence
location: 8562..9326
location: region:8562-9326:1
so has part: feature:8562-9326:1:exon
subclass of: SO_0000010

position:8562:1
position: 8562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9326:1
position: 9326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8562-9326:1:exon

bpuSUM_RS08725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08725
old locus tag: bpuSUM_001738
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVVKNIVLTLLFIVFSCSHDVFSKPSSGLIKDYAEVIFDSHRYYYVEEFPIDLDLKFEFVDTKSESTSQTDHRVLGSHHIATRRSVYESSSEKANSFSFGKVGLLVSSAYLGKLGIKTVKGLNEHLKNKEFDSLGVKFVFDSGLDRLSSISNRNLLGSQCIVFDHNELINYIDIIKNKKNNVKLTLNLANKDLQNSKYRLFSKTYNKYIDIENKFLNCEGQNNSNFHFKIEGNVGSLLSLLEEILIKVKQGEL
SIO_010081: bpuSUM_RS08725
subclass of: SO_0000673
so part of: bpuSUM_RS08725
location: 8562..9326
location: region:8562-9326:1
so has part: feature:8562-9326:1:exon

WP_247068033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8562-9326:1:exon

bpuSUM_RS08730
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08730
old locus tag: bpuSUM_001739
so part of: sequence
location: 10229..10402
location: region:10229-10402:1
so has part: feature:10229-10402:1:exon
subclass of: SO_0000010

position:10229:1
position: 10229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10402:1
position: 10402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10229-10402:1:exon

bpuSUM_RS08730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08730
old locus tag: bpuSUM_001739
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLENEAARKARFFRRRDNNLPVQLSRTARDHAENSLDQLKCSVDKLTEAKGRIKI
SIO_010081: bpuSUM_RS08730
subclass of: SO_0000673
so part of: bpuSUM_RS08730
location: 10229..10402
location: region:10229-10402:1
so has part: feature:10229-10402:1:exon

WP_247068035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10229-10402:1:exon

bpuSUM_RS08735
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08735
old locus tag: bpuSUM_001741
pseudo: true
so part of: sequence
location: 11623..12568
location: region:11623-12568:1
so has part: feature:11623-12568:1:exon
subclass of: SO_0000010

position:11623:1
position: 11623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12568:1
position: 12568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11623-12568:1:exon

bpuSUM_RS08735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08735
old locus tag: bpuSUM_001741
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539477.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08735
subclass of: SO_0000673
so part of: bpuSUM_RS08735
location: 11623..12568
location: region:11623-12568:1
so has part: feature:11623-12568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11623-12568:1:exon

bpuSUM_RS08740
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08740
old locus tag: bpuSUM_001742
so part of: sequence
location: complement(13157..13576)
location: region:13157-13576:-1
so has part: feature:13157-13576:-1:exon
subclass of: SO_0000010

position:13157:-1
position: 13157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13576:-1
position: 13576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13157-13576:-1:exon

bpuSUM_RS08740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08740
old locus tag: bpuSUM_001742
inference: COORDINATES: protein motif:HMM:NF015275.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mlp family lipoprotein
translation: MVKFINYLIFCSLILLYCCKANEVPSSKHENIKPAKPTEIIPKTPEELLKEKLNDTEKTNLQFLKDALGDDNKFNRFIFSNEDKIKAALEHIKTQLESCTEEQKKTFKELIKAYFGQMNDSELDQFKTNVLSGCNGAGG
SIO_010081: bpuSUM_RS08740
subclass of: SO_0000673
so part of: bpuSUM_RS08740
location: complement(13157..13576)
location: region:13157-13576:-1
so has part: feature:13157-13576:-1:exon

WP_247068037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13157-13576:-1:exon

bpuSUM_RS08745
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08745
old locus tag: bpuSUM_001743
so part of: sequence
location: 13740..14306
location: region:13740-14306:1
so has part: feature:13740-14306:1:exon
subclass of: SO_0000010

position:13740:1
position: 13740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14306:1
position: 14306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13740-14306:1:exon

bpuSUM_RS08745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08745
old locus tag: bpuSUM_001743
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF603 domain-containing protein
translation: MSRVKKSFDDYVVYFREGKLNDARIAKEMGVSRVNVGKMRRRWEEIKDDPEYITGAAKFTICEDTLNNILFHASQSTAQARDLKSQFSMAKSMLGLEFINSFSRYLELELKTHNYKIEELESQISNIYKKTLSKKVAHSEEESRELEELKLKLDEFKRERELRKMSLCYKTMLKLKATGTDVRSKLQI
SIO_010081: bpuSUM_RS08745
subclass of: SO_0000673
so part of: bpuSUM_RS08745
location: 13740..14306
location: region:13740-14306:1
so has part: feature:13740-14306:1:exon

WP_247068039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13740-14306:1:exon

bpuSUM_RS08750
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08750
old locus tag: bpuSUM_001744
so part of: sequence
location: 14294..15592
location: region:14294-15592:1
so has part: feature:14294-15592:1:exon
subclass of: SO_0000010

position:14294:1
position: 14294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15592:1
position: 15592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14294-15592:1:exon

bpuSUM_RS08750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08750
old locus tag: bpuSUM_001744
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010258365.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PBSX family phage terminase large subunit
translation: MTNLKVTDFIKPKALEIDFKGFESKYLTSKQLKVIRNIEENNQSKIILSGGIASGKTFLACYLYLKMLIKNRHLYREDTNNFIIGNSQKSLEVNVMSELEDIASMLKISFKPKFSNTSYFEIDSLRVNLYGGDRASDFERFRGSNSALIYVNEATTLHKETLIECLKRLRVGMQAIIFDTNPDSPEHFFKLDYIDNTKIYSTYNFTTYDNELIAREFIKTQEEIYRDIPTYKARVLLGEWVPSCDAIFTNVNLTSKHEFISPIAYLDPAYSIGGDNTALCVLERVDQSYYAFIFQEKLPVGDPKMLNTIKTILTNLNVHKLYVEDRDNVSGHGNVTKMFLKLRAGMSHKFKIAPIKPISNKFTRIATLIEPFATSKLSIMDYSSKSAVSDIYKYKGDGKSDDDSLDSLSASYMLLTLSMRTLRAHFTKIRFL
SIO_010081: bpuSUM_RS08750
subclass of: SO_0000673
so part of: bpuSUM_RS08750
location: 14294..15592
location: region:14294-15592:1
so has part: feature:14294-15592:1:exon

WP_247068066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14294-15592:1:exon

bpuSUM_RS08755
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS08755
so part of: sequence
location: 15634..16341
location: region:15634-16341:1
so has part: feature:15634-16341:1:exon
subclass of: SO_0000010

position:15634:1
position: 15634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16341:1
position: 16341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15634-16341:1:exon

bpuSUM_RS08755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS08755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MGLAQPVITQQMVIAELTKAGIKRDIAIDLSYRYYRNELTYKDIEFLKENFDIKLEKVEALLQSEIKSVKTDLDNKIDTVRTELKSDIKDLDNKFDTKFNELHTKIDTVENNFNLKLEKVESLLQAEIKSVESSLQAEIKSVKTELDNKIDTKFNELDNKIDTVRNELKSDIKDLDNKIDNVRKDMEINRIELDNKLDKTASEFKNTSRLHNWMFGTIITLNIGIFLALMSLLVK
SIO_010081: bpuSUM_RS08755
subclass of: SO_0000673
so part of: bpuSUM_RS08755
location: 15634..16341
location: region:15634-16341:1
so has part: feature:15634-16341:1:exon

WP_247068041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15634-16341:1:exon

bpuSUM_RS08760
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08760
old locus tag: bpuSUM_001748
pseudo: true
so part of: sequence
location: 16566..17513
location: region:16566-17513:1
so has part: feature:16566-17513:1:exon
subclass of: SO_0000010

position:16566:1
position: 16566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17513:1
position: 17513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16566-17513:1:exon

bpuSUM_RS08760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08760
old locus tag: bpuSUM_001748
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08760
subclass of: SO_0000673
so part of: bpuSUM_RS08760
location: 16566..17513
location: region:16566-17513:1
so has part: feature:16566-17513:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16566-17513:1:exon

bpuSUM_RS08765
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08765
old locus tag: bpuSUM_001749
so part of: sequence
location: 17634..18677
location: region:17634-18677:1
so has part: feature:17634-18677:1:exon
subclass of: SO_0000010

position:17634:1
position: 17634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18677:1
position: 18677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17634-18677:1:exon

bpuSUM_RS08765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08765
old locus tag: bpuSUM_001749
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKRITLCVLLMTLFLLLSCGSGTTSAEDSQGRFLKSIINLGNDFLNVFTSLTDMVGGVLGFNINTKKSDVAAYFKTVQDTLSSTKIALEKIVGDMKAENNPNAATADAAVKTLVDNTLIKILEGAKTASEAISSDASDPIANVAAQGSAGVAGIEVDKLVKGIKDIVDVVLKDKGNPEAGTDKKADDLGARVANAGNGEAGKLFGNAAIANDPKKSAADASKAVGAVTGADILQAMVKDDGDAAKLAKETSGNANAIPKDATIAGAVALRAMAKGGKFTNGNADANDVSDAVKGAAISAVTKALGTLTIAIRNTIDLGLKTVKDVIKFNSNDTPVTNDNTTSEAKKN
SIO_010081: bpuSUM_RS08765
subclass of: SO_0000673
so part of: bpuSUM_RS08765
location: 17634..18677
location: region:17634-18677:1
so has part: feature:17634-18677:1:exon

WP_247068043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17634-18677:1:exon

bpuSUM_RS08770
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08770
old locus tag: bpuSUM_001750
so part of: sequence
location: 18799..19416
location: region:18799-19416:1
so has part: feature:18799-19416:1:exon
subclass of: SO_0000010

position:18799:1
position: 18799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19416:1
position: 19416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18799-19416:1:exon

bpuSUM_RS08770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08770
old locus tag: bpuSUM_001750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633323.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MMKRITLCALFLTLFLLLSCNTSGKNLKEDEVAKLDGTVLDLKSVSKNITNAVAFAKSVKEVHTLVKSIDELAKAIGKKIKADGTDVEDDAGKNSSLVAGVRSIMLALTPKLGTLEVIDGISDKLKTEIDAVKNKSKSFVDKLKDTSSDDDAKKAIDRIGKKDGDKGVAELVALNTAIDTLLKHAEDAVTAAIKELTTSTKPSNT
SIO_010081: bpuSUM_RS08770
subclass of: SO_0000673
so part of: bpuSUM_RS08770
location: 18799..19416
location: region:18799-19416:1
so has part: feature:18799-19416:1:exon

WP_247068068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18799-19416:1:exon

bpuSUM_RS08775
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08775
old locus tag: bpuSUM_001751
pseudo: true
so part of: sequence
location: 19636..20693
location: region:19636-20693:1
so has part: feature:19636-20693:1:exon
subclass of: SO_0000010

position:19636:1
position: 19636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20693:1
position: 20693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19636-20693:1:exon

bpuSUM_RS08775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08775
old locus tag: bpuSUM_001751
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633313.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08775
subclass of: SO_0000673
so part of: bpuSUM_RS08775
location: 19636..20693
location: region:19636-20693:1
so has part: feature:19636-20693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19636-20693:1:exon

bpuSUM_RS08780
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08780
old locus tag: bpuSUM_001752
pseudo: true
so part of: sequence
location: 20783..21741
location: region:20783-21741:1
so has part: feature:20783-21741:1:exon
subclass of: SO_0000010

position:20783:1
position: 20783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21741:1
position: 21741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20783-21741:1:exon

bpuSUM_RS08780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08780
old locus tag: bpuSUM_001752
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08780
subclass of: SO_0000673
so part of: bpuSUM_RS08780
location: 20783..21741
location: region:20783-21741:1
so has part: feature:20783-21741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20783-21741:1:exon

bpuSUM_RS08785
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08785
old locus tag: bpuSUM_001753
so part of: sequence
location: 21862..22911
location: region:21862-22911:1
so has part: feature:21862-22911:1:exon
subclass of: SO_0000010

position:21862:1
position: 21862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22911:1
position: 22911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21862-22911:1:exon

bpuSUM_RS08785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08785
old locus tag: bpuSUM_001753
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683335.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKRITLCALLMTLFLLLSCGSGTTSAEDSQSRFLKSVIGLGNDFLSVFTSLSDMVGGVLGFNTTTKKSDVGNYFKTMHDTLSSTKTSLEKIVADMKSENNPNAATTETAVDKLVSETLDKIIQGSKTVSEAIGDASDLLANVADQNAGAAGTEVDKLVQGIKSLVDVVLKEKDNPEAGDDKKADDGNTARNNNAAADGEAGKLFASDNAGDAANAKKSATDATKAVGAVTGADILKAMIKDNGDTVKLAKETTGSVTVAPKDATIAGGLALRAMAKNGKFAGPSNNASVEAKKTVMGAVTSSVTKVLGTLTIAIRNTIDVGLKTVKDAMKFNPDSTPVTTDKQISENKS
SIO_010081: bpuSUM_RS08785
subclass of: SO_0000673
so part of: bpuSUM_RS08785
location: 21862..22911
location: region:21862-22911:1
so has part: feature:21862-22911:1:exon

WP_247068045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21862-22911:1:exon

bpuSUM_RS08790
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS08790
so part of: sequence
location: 23210..23806
location: region:23210-23806:1
so has part: feature:23210-23806:1:exon
subclass of: SO_0000010

position:23210:1
position: 23210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23806:1
position: 23806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23210-23806:1:exon

bpuSUM_RS08790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
gene: bdr
locus tag: bpuSUM_RS08790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MGLAQPVITQQMVIAELTRAGINRDIAIDLSYRYYKNELTHKDIEYLETTFNLKLEKVEALLQAEIQGIETTLKSDIKDLDTKIDYVRSELKSDIRDLDNKVDTVRNELKSDIKDLDNKIDTVENNLNIKIDTKFNELDNKIDNVRSELKSDIKDLDNKIDVNKMELKSTLRLHGWMFGTIITLNIGIFLALMSLLVK
SIO_010081: bpuSUM_RS08790
subclass of: SO_0000673
so part of: bpuSUM_RS08790
location: 23210..23806
location: region:23210-23806:1
so has part: feature:23210-23806:1:exon

WP_247068047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23210-23806:1:exon

bpuSUM_RS08795
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08795
old locus tag: bpuSUM_001757
so part of: sequence
location: 24010..25080
location: region:24010-25080:1
so has part: feature:24010-25080:1:exon
subclass of: SO_0000010

position:24010:1
position: 24010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25080:1
position: 25080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24010-25080:1:exon

bpuSUM_RS08795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08795
old locus tag: bpuSUM_001757
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALLMTLFLLLSCGSGSASAEDPKTTFLDSLVKIGQGFQEVFGIFGNAIGDAFGLTAVKSGDQRSKVGEHFKTIGDGLSTTKEKLKELSGEISEANNANSSTIESVKSAIVSASDVFERLITALTTLADTAKEAGNTDIGDAANNAAAVAADKTSVEAIIAGVKDIIGAAEKSGIEIKSGNAGNAVNAAAASAPSAIGSNNAGQGAGDKLAAEVAKADPWAMIDKIKNSTTNTAVLAGNDKDAGTLATGTNANDANGAGAKTNADLAAAVALKAMTKGGKFSATVADTDAVKAAAVTAVNKVLGILDIIIKKTVASELDKVGKAVKGIQYSETTTQSTEASSTQHTATK
SIO_010081: bpuSUM_RS08795
subclass of: SO_0000673
so part of: bpuSUM_RS08795
location: 24010..25080
location: region:24010-25080:1
so has part: feature:24010-25080:1:exon

WP_247068070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24010-25080:1:exon

bpuSUM_RS08800
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08800
old locus tag: bpuSUM_001758
so part of: sequence
location: 25198..26241
location: region:25198-26241:1
so has part: feature:25198-26241:1:exon
subclass of: SO_0000010

position:25198:1
position: 25198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26241:1
position: 26241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25198-26241:1:exon

bpuSUM_RS08800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08800
old locus tag: bpuSUM_001758
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMKRITLCALLITLFLLLSCGSGTTSAEDPKTTFLNSIANLGKGFLDVFTSLSDMVSGAFGIKAETKKSDVGKYFSDIEKTMTSVKEKLNTVVTEHGNYPKVKEVVDKFITNTLDKIAEGAKTAASGATSSDAIGNATADQEAVAADAASVNALVKGIKTIVGVVLKDKGSADATKTGDDGENKKDIGKLFSDTKADAKEENIAKAAASIGAVSGADVLQAIAKSGDANNNVEINNAKDAAELAVAKKDSATKETKQKDAVIAAGIALRAMAKDGKLAAHNDAKHAHAVNGAAASAVGKTLSTLIIAIRNTVDSGLKTISEALAAVKQEDKSADSTTPLDVTSGNNK
SIO_010081: bpuSUM_RS08800
subclass of: SO_0000673
so part of: bpuSUM_RS08800
location: 25198..26241
location: region:25198-26241:1
so has part: feature:25198-26241:1:exon

WP_247068072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25198-26241:1:exon

bpuSUM_RS08805
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08805
old locus tag: bpuSUM_001759
so part of: sequence
location: 26331..27368
location: region:26331-27368:1
so has part: feature:26331-27368:1:exon
subclass of: SO_0000010

position:26331:1
position: 26331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27368:1
position: 27368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26331-27368:1:exon

bpuSUM_RS08805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08805
old locus tag: bpuSUM_001759
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633313.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MTLFLLLSCGSGQQSLDLPNGGGAATGGSSLSSVLIDVGRSAENAFYSFLELLSGTLGLRVTKDTTKQQVGNYFNSLGDKLGQASDELEEVAKKSKTELDKGGINKIIKDAVDTAKATLNTLKTHLDSLKDIGDAKVVGDAASDAAGTAADETELKKAYNSLKGIVETATTEGISKPKVGATTLKVDNADNKDGAKILATDNKPAATDAAKAAAILATVSGEEILNSIVKSGESDAALAAAANGSTTAISFAKGGSAANLAGADTAKAAAVAGGVALRSLVKTGKLAAAAAGQGGQGEAQGVGITAANKLLVAVEDLIKKTVKNVLEKAKAKIDEARAPKEAAQQ
SIO_010081: bpuSUM_RS08805
subclass of: SO_0000673
so part of: bpuSUM_RS08805
location: 26331..27368
location: region:26331-27368:1
so has part: feature:26331-27368:1:exon

WP_247068050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26331-27368:1:exon

bpuSUM_RS08810
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08810
old locus tag: bpuSUM_001760
pseudo: true
so part of: sequence
location: <27486..28472
location: region:27486-28472:1
so has part: feature:27486-28472:1:exon
subclass of: SO_0000010

position:27486:1
position: 27486
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:28472:1
position: 28472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27486-28472:1:exon

bpuSUM_RS08810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08810
old locus tag: bpuSUM_001760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539475.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08810
subclass of: SO_0000673
so part of: bpuSUM_RS08810
location: <27486..28472
location: region:27486-28472:1
so has part: feature:27486-28472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27486-28472:1:exon

bpuSUM_RS08815
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08815
old locus tag: bpuSUM_001761
so part of: sequence
location: 28596..29615
location: region:28596-29615:1
so has part: feature:28596-29615:1:exon
subclass of: SO_0000010

position:28596:1
position: 28596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29615:1
position: 29615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28596-29615:1:exon

bpuSUM_RS08815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08815
old locus tag: bpuSUM_001761
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKRITLCALLITLFLLLSCGSGTTSAEDTQGRFLKSVISLGNDFLNVFTSLSDMVGGVLGFNTTTKKSDVGNYFKTIHDTLSSTKTFLEKIVADMKSENNPNAATTETAVNKLVSETLDKIIQGAKTASEAIGDASDLLGNVAAQNNGGAAGTEVDKLVKGIKSIVDVVLGKEGKHDAGDDKKASDGNTARTANGGTDEAGKLFGNAAIDSADNAKKSVADAAKAVGAVTGADILQAMVKDGSDAKAANAKDGTIAGAIALTAMAKDGKFANDNVGTAEVTVAVKGAAVSAVTKALGTLTIAIRNTIDSGLKTVKEAMKFNPTDTPLTTDNQTPETKGQ
SIO_010081: bpuSUM_RS08815
subclass of: SO_0000673
so part of: bpuSUM_RS08815
location: 28596..29615
location: region:28596-29615:1
so has part: feature:28596-29615:1:exon

WP_247068052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28596-29615:1:exon

bpuSUM_RS08820
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08820
old locus tag: bpuSUM_001762
so part of: sequence
location: 29773..30813
location: region:29773-30813:1
so has part: feature:29773-30813:1:exon
subclass of: SO_0000010

position:29773:1
position: 29773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30813:1
position: 30813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29773-30813:1:exon

bpuSUM_RS08820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08820
old locus tag: bpuSUM_001762
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683354.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MTLFLFLSCGSGQQSVDAANGGGAATGGRTLSSVLMDVGRSAENAFYSFLELLSGTLGLRVTKDTTKQQVGNYFNSLGDKLGQASDELEEVAKKSKTELDKGGINKIIKDAVDTAKATLNTLKTHLDSLKDIGDAKVVGDAASDAAGTAADETELKKAYNSLKGIVETATTEGISKPKVGATTLKVDNADNKDGAKILATSAGKPAAADAGKAALILASMSGEEILASIVESTEGDAALNEAAKAETTAMSFARGGQAAHLAGADTAKAAAVAGGVALRSLVKTGKLASAAAGQGGQGEAQGVGITAANKLLVAVEDIIKKTVKNVLEKAKAKIDEARAPKEAGQK
SIO_010081: bpuSUM_RS08820
subclass of: SO_0000673
so part of: bpuSUM_RS08820
location: 29773..30813
location: region:29773-30813:1
so has part: feature:29773-30813:1:exon

WP_247068074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29773-30813:1:exon

bpuSUM_RS08825
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08825
old locus tag: bpuSUM_001763
pseudo: true
so part of: sequence
location: <30912..31955
location: region:30912-31955:1
so has part: feature:30912-31955:1:exon
subclass of: SO_0000010

position:30912:1
position: 30912
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:31955:1
position: 31955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30912-31955:1:exon

bpuSUM_RS08825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08825
old locus tag: bpuSUM_001763
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633324.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08825
subclass of: SO_0000673
so part of: bpuSUM_RS08825
location: <30912..31955
location: region:30912-31955:1
so has part: feature:30912-31955:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30912-31955:1:exon

bpuSUM_RS08830
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08830
old locus tag: bpuSUM_001764
so part of: sequence
location: 32074..32724
location: region:32074-32724:1
so has part: feature:32074-32724:1:exon
subclass of: SO_0000010

position:32074:1
position: 32074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32724:1
position: 32724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32074-32724:1:exon

bpuSUM_RS08830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08830
old locus tag: bpuSUM_001764
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633340.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKRITLCALFLTLFLLSSCNTSGAATKDGQAAKSDGTLIDLVTITKNIKDSVAFAKSVKEIHTLVKSIDELAKAIGKKIKNDGTLEAVADKNGSLIAGVVSIAAAIEAKVGELKIADSLKGLNGKVKDVEDKTKAFTAKLKNQHAVLGAADGATTDENAKKAIDYVNKANGDNGAKELGEINTAIDALLNDAEAAVTSAINVLTTSTKSASPAQSN
SIO_010081: bpuSUM_RS08830
subclass of: SO_0000673
so part of: bpuSUM_RS08830
location: 32074..32724
location: region:32074-32724:1
so has part: feature:32074-32724:1:exon

WP_247067877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32074-32724:1:exon

bpuSUM_RS08835
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08835
old locus tag: bpuSUM_001765
pseudo: true
so part of: sequence
location: 32927..34006
location: region:32927-34006:1
so has part: feature:32927-34006:1:exon
subclass of: SO_0000010

position:32927:1
position: 32927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34006:1
position: 34006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32927-34006:1:exon

bpuSUM_RS08835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08835
old locus tag: bpuSUM_001765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633309.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08835
subclass of: SO_0000673
so part of: bpuSUM_RS08835
location: 32927..34006
location: region:32927-34006:1
so has part: feature:32927-34006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32927-34006:1:exon

bpuSUM_RS08840
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08840
old locus tag: bpuSUM_001766
pseudo: true
so part of: sequence
location: 34097..35119
location: region:34097-35119:1
so has part: feature:34097-35119:1:exon
subclass of: SO_0000010

position:34097:1
position: 34097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35119:1
position: 35119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34097-35119:1:exon

bpuSUM_RS08840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08840
old locus tag: bpuSUM_001766
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539703.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08840
subclass of: SO_0000673
so part of: bpuSUM_RS08840
location: 34097..35119
location: region:34097-35119:1
so has part: feature:34097-35119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34097-35119:1:exon

bpuSUM_RS08845
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08845
old locus tag: bpuSUM_001767
pseudo: true
so part of: sequence
location: 35211..36197
location: region:35211-36197:1
so has part: feature:35211-36197:1:exon
subclass of: SO_0000010

position:35211:1
position: 35211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36197:1
position: 36197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35211-36197:1:exon

bpuSUM_RS08845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08845
old locus tag: bpuSUM_001767
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bpuSUM_RS08845
subclass of: SO_0000673
so part of: bpuSUM_RS08845
location: 35211..36197
location: region:35211-36197:1
so has part: feature:35211-36197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35211-36197:1:exon

bpuSUM_RS08850
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08850
old locus tag: bpuSUM_001768
so part of: sequence
location: 36581..37489
location: region:36581-37489:1
so has part: feature:36581-37489:1:exon
subclass of: SO_0000010

position:36581:1
position: 36581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37489:1
position: 37489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36581-37489:1:exon

bpuSUM_RS08850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08850
old locus tag: bpuSUM_001768
inference: COORDINATES: protein motif:HMM:NF033721.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P12 family lipoprotein
translation: MKRSILSVCMLALLCLLSCDMNALNDLLNEVREKVLDESKDNKDLNHEQGNQEQKEDVIDDFEKGVEIQQDMEIQPVNSGFEVSKQVDPYYVQEEVIKIEEKDLVPSTESEKEAQEEIEKAESVFQASEFAKLTEERMLGLKNDYEQIKTSFYDIFSELNNKIQNKIERYSRRNKRQINRIQIQKLIQSYNQLNEQRSNIDRLMIQVDSGLDELGSAKLFFNKAKVTLKEGITERLINKHRNYWRSRRGESDLVSRQARREAENALTQLESSSMKLIEAKVIKKEIEELISEAKTVLENFAR
SIO_010081: bpuSUM_RS08850
subclass of: SO_0000673
so part of: bpuSUM_RS08850
location: 36581..37489
location: region:36581-37489:1
so has part: feature:36581-37489:1:exon

WP_247067875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36581-37489:1:exon

bpuSUM_RS08855
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08855
old locus tag: bpuSUM_001769
so part of: sequence
location: 38126..38983
location: region:38126-38983:1
so has part: feature:38126-38983:1:exon
subclass of: SO_0000010

position:38126:1
position: 38126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38983:1
position: 38983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38126-38983:1:exon

bpuSUM_RS08855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08855
old locus tag: bpuSUM_001769
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012537773.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: complement regulator-acquiring protein
translation: MRTNLFIFTLLIIGLVSCDLNSKLLGSKKGNKDVPKKVVDGVQGDESYKQANVDDLAKVVNDIQGDEPAKEDKDVADKAELISELKKDTESLITVVKKDKAEVEDGNQYEMKDEVFKAVTDAVNNKTLDSVENKEARRLFYSSLGYDKGKIKEFAKILKKIESDAANKGTWIKDIISAGREHLQSNFEKVIDKLEKSKEKLAKLSLVDLKEVKTKFDEIKSQREAFIKAVDSLIASYKAKTDNIDSDSEKLIKHVEKKYKDLITVKIPGVKSVYDKIVGVLDTIK
SIO_010081: bpuSUM_RS08855
subclass of: SO_0000673
so part of: bpuSUM_RS08855
location: 38126..38983
location: region:38126-38983:1
so has part: feature:38126-38983:1:exon

WP_247067872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38126-38983:1:exon

bpuSUM_RS08860
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08860
old locus tag: bpuSUM_001770
so part of: sequence
location: complement(39070..40350)
location: region:39070-40350:-1
so has part: feature:39070-40350:-1:exon
subclass of: SO_0000010

position:39070:-1
position: 39070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40350:-1
position: 40350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39070-40350:-1:exon

bpuSUM_RS08860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08860
old locus tag: bpuSUM_001770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILKNKYLALTLLLSLIGCKFFFTDEEIHTRYSQTLDKVNSMMMNTNEIDMKNIFSDNQLSKINNKSTKDISPKQTKPQKSISVLTQPETKKEKFSLPTHKDITIITADTSQSKNYSNSNIIIDNASIITSNTDENIVTQKIVINTPAKTDLTHTTEHNNISTLDDDTTYPSQNNTNNPSPQNSKTIEHPIPLIGNSKTPLNALNGESHNIQYGYTYNLHYDSNPIISGSYSDSSITIEEYEFDEDEDEDSKLETRLDNQYKFNLNKTTNSVEQALKLAEQIKDDLEKVEFHRIKLSNYYGIRAEEHEKQTAREELSKFTKDKLEADLKKLLSEIEKGFNAATILITYNDYGGNLQSDLSAKTKLDELKTEVSSLITKIQKLNNKNYQAYPTSSYDNYQSYQALKNPYSKLTLVKDLLTHTGTLTR
SIO_010081: bpuSUM_RS08860
subclass of: SO_0000673
so part of: bpuSUM_RS08860
location: complement(39070..40350)
location: region:39070-40350:-1
so has part: feature:39070-40350:-1:exon

WP_247068054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39070-40350:-1:exon

bpuSUM_RS08865
type: Gene
subclass of: SO_0000704
RO_0002162: 2756107
locus tag: bpuSUM_RS08865
old locus tag: bpuSUM_001771
so part of: sequence
location: complement(40372..41046)
location: region:40372-41046:-1
so has part: feature:40372-41046:-1:exon
subclass of: SO_0000010

position:40372:-1
position: 40372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41046:-1
position: 41046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40372-41046:-1:exon

bpuSUM_RS08865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2756107
locus tag: bpuSUM_RS08865
old locus tag: bpuSUM_001771
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKIFLLLTVIINLSADRTEERKQYDIYDDAKKKLVRVKDWKTNVNNLKNIGPYFTKFTERIKSLTDKKLAYEIQDVFTTSLCKPISEDENVVPKEHIPLFEKYYKFIKALKHKNLDQAAYILYEIYDLNKMFTNIDESIKTTHYLLITYIKVKDKNQHKAVYKKLENIYDKLRQKYFSILNILDHNDIDNNFEKFMLKFIEFHKLVAHMDSNITNLMIYAYLV
SIO_010081: bpuSUM_RS08865
subclass of: SO_0000673
so part of: bpuSUM_RS08865
location: complement(40372..41046)
location: region:40372-41046:-1
so has part: feature:40372-41046:-1:exon

WP_247067868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40372-41046:-1:exon