Actinomadura graeca strain 32-07 plasmid pAGRA3207_2, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Streptosporangiales; Thermomonosporaceae; Actinomadura.
Actinomadura graeca sp. nov.: A novel producer of the macrocyclic antibiotic zelkovamycin
Submitted (27-JUL-2020) Biodiscovery Institute, The University of Nottingham, University Park, Nottingham, Nottinghamshire NG7 2RD, UK
REFSEQ INFORMATION: The reference sequence is identical to\nCP059574.1.\nBacteria and source DNA available from Weng Chan, Biodiscovery\nInstitute, University of Nottingham, Nottingham NG7 2RD.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2\nAssembly Name :: UON_Agra_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 122.82x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/20/2023 06:22:47\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,924\nCDSs (total) :: 7,838\nGenes (coding) :: 7,739\nCDSs (with protein) :: 7,739\nGenes (RNA) :: 86\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 68\nncRNAs :: 3\nPseudo Genes (total) :: 99\nCDSs (without protein) :: 99\nPseudo Genes (ambiguous residues) :: 0 of 99\nPseudo Genes (frameshifted) :: 28 of 99\nPseudo Genes (incomplete) :: 79 of 99\nPseudo Genes (internal stop) :: 8 of 99\nPseudo Genes (multiple problems) :: 14 of 99\nCRISPR Arrays :: 5\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF024970.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018793458.1
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_018850695.1
COORDINATES: similar to AA sequence:RefSeq:WP_014133201.1
COORDINATES: protein motif:HMM:NF012514.2
GO:0016787 - hydrolase activity [Evidence IEA]