Cherax quadricarinatus isolate HC-2022 chromosome 100, ASM2687515v2, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax.
REFSEQ INFORMATION: The reference sequence is identical to\nCM049294.1.\nAssembly name: ASM2687515v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang Academy of\nAgricultural Sciences on 2022/12/14. The original whole-genome\nshotgun project has the accession JAPQEV000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang Academy of Agricultural Sciences\nAssembly Method :: wtdbg2 v. 2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 108.71x\nSequencing Technology :: Illumina HiSeq; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_026875155.1-RS_2023_01\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 01/17/2023\n##Genome-Annotation-Data-END##
acyl-coenzyme A diphosphatase FITM2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
acyl-coenzyme A diphosphatase FITM2-like
similar to RNA sequence (same species):INSD:HACB02010054.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 642 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 35 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 486 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705062; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon.
centrosomal protein of 290 kDa-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 3 Proteins
uncharacterized LOC128705055; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705056; Derived by automated computational analysis using gene prediction method: Gnomon.
pigment-dispersing hormone 1 peptides-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pigment-dispersing hormone 1 peptides-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
U2 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00004
Derived by automated computational analysis using gene prediction method: cmsearch.
uncharacterized LOC128705066; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705067; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705057; Derived by automated computational analysis using gene prediction method: Gnomon.
gastrula zinc finger protein XlCGF57.1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
gastrula zinc finger protein XlCGF57.1-like
uncharacterized LOC128705051; Derived by automated computational analysis using gene prediction method: Gnomon.
NADH-ubiquinone oxidoreductase chain 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
cytochrome c oxidase subunit 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
uncharacterized LOC128705052; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705053; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705054; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705060; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705074; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705075; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128705075, transcript variant X2
uncharacterized LOC128705075, transcript variant X3
uncharacterized LOC128705075, transcript variant X1