Cherax quadricarinatus isolate HC-2022 chromosome 91, ASM2687515v2, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax.
REFSEQ INFORMATION: The reference sequence is identical to\nCM049285.1.\nAssembly name: ASM2687515v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang Academy of\nAgricultural Sciences on 2022/12/14. The original whole-genome\nshotgun project has the accession JAPQEV000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang Academy of Agricultural Sciences\nAssembly Method :: wtdbg2 v. 2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 108.71x\nSequencing Technology :: Illumina HiSeq; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_026875155.1-RS_2023_01\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 01/17/2023\n##Genome-Annotation-Data-END##
uncharacterized LOC128703943; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01057680.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 92 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; added 14 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
oxysterol-binding protein-related protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
oxysterol-binding protein-related protein 1-like, transcript variant X2
COORDINATES: polyA evidence [ECO:0006239]
oxysterol-binding protein-related protein 1-like, transcript variant X1
oxysterol-binding protein-related protein 1-like, transcript variant X3
oxysterol-binding protein-related protein 1-like
E3 ubiquitin-protein ligase mib1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
putative ankyrin repeat protein RF_0381; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamic acid-rich protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
ankycorbin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703861; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703861, transcript variant X2
uncharacterized LOC128703861, transcript variant X1
uncharacterized protein LOC128703861 isoform X2
uncharacterized protein LOC128703861 isoform X1
uncharacterized LOC128703947; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
uncharacterized LOC128703862; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703863; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703948; Derived by automated computational analysis using gene prediction method: Gnomon.
vinculin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02058838.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 2957 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 2847 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC128703866; Derived by automated computational analysis using gene prediction method: Gnomon.
gastrula zinc finger protein XlCGF57.1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
gastrula zinc finger protein XlCGF57.1-like, transcript variant X3
gastrula zinc finger protein XlCGF57.1-like, transcript variant X2
gastrula zinc finger protein XlCGF57.1-like, transcript variant X1
gastrula zinc finger protein XlCGF57.1-like
ankyrin repeat domain-containing protein 29-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain-containing protein 29-like, transcript variant X2
ankyrin repeat domain-containing protein 29-like, transcript variant X1
ankyrin repeat domain-containing protein 29-like isoform X1
ankyrin repeat domain-containing protein 29-like, transcript variant X3
ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
26S proteasome non-ATPase regulatory subunit 10-like; Derived by automated computational analysis using gene prediction method: Gnomon.
26S proteasome non-ATPase regulatory subunit 10-like
transmembrane protein 177-like; Derived by automated computational analysis using gene prediction method: Gnomon.
unconventional prefoldin RPB5 interactor-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
unconventional prefoldin RPB5 interactor-like protein, transcript variant X2
unconventional prefoldin RPB5 interactor-like protein, transcript variant X3
unconventional prefoldin RPB5 interactor-like protein, transcript variant X1
unconventional prefoldin RPB5 interactor-like protein, transcript variant X4
unconventional prefoldin RPB5 interactor-like protein
transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC128703872; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703872, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 6 Proteins
uncharacterized LOC128703872, transcript variant X1
uncharacterized LOC128703873; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703951; Derived by automated computational analysis using gene prediction method: Gnomon.
clumping factor A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703952; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703954; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703960; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703961; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
arginine/serine-rich coiled-coil protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
arginine/serine-rich coiled-coil protein 2-like, transcript variant X2
arginine/serine-rich coiled-coil protein 2-like, transcript variant X1
arginine/serine-rich coiled-coil protein 2-like
uncharacterized LOC128703876; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703876, transcript variant X2
uncharacterized LOC128703876, transcript variant X1
uncharacterized LOC128703877; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703878; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703878, transcript variant X2
uncharacterized LOC128703878, transcript variant X3
uncharacterized LOC128703878, transcript variant X1
uncharacterized protein LOC128703878 isoform X2
uncharacterized protein LOC128703878 isoform X3
uncharacterized protein LOC128703878 isoform X1
uncharacterized LOC128703880; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
uncharacterized LOC128703962; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
uncharacterized LOC128703882; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703881; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703881, transcript variant X4
uncharacterized LOC128703881, transcript variant X5
uncharacterized LOC128703881, transcript variant X2
uncharacterized LOC128703881, transcript variant X3
uncharacterized LOC128703881, transcript variant X1
uncharacterized protein LOC128703881 isoform X2
alkaline phosphatase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01022179.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 661 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 512 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
U1 small nuclear ribonucleoprotein 70 kDa-like; Derived by automated computational analysis using gene prediction method: Gnomon.
U1 small nuclear ribonucleoprotein 70 kDa-like
uncharacterized LOC128703883; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins
RAB11-binding protein RELCH homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: RAB11-binding protein RELCH homolog
alkaline ceramidase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins
alkaline phosphatase, tissue-nonspecific isozyme-like; Derived by automated computational analysis using gene prediction method: Gnomon.
alkaline phosphatase, tissue-nonspecific isozyme-like
serine/arginine repetitive matrix protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
serine/arginine repetitive matrix protein 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads
serine/arginine repetitive matrix protein 1-like, transcript variant X1
serine/arginine repetitive matrix protein 1-like
60S ribosomal protein L8-like; Derived by automated computational analysis using gene prediction method: Gnomon.
60S ribosomal protein L8-like, transcript variant X2
60S ribosomal protein L8-like, transcript variant X3
60S ribosomal protein L8-like, transcript variant X1
60S ribosomal protein L8-like isoform X1
60S ribosomal protein L8-like isoform X2
putative ATP-dependent RNA helicase Pl10; Derived by automated computational analysis using gene prediction method: Gnomon.
putative ATP-dependent RNA helicase Pl10, transcript variant X1
putative ATP-dependent RNA helicase Pl10, transcript variant X3
putative ATP-dependent RNA helicase Pl10, transcript variant X5
putative ATP-dependent RNA helicase Pl10, transcript variant X6
putative ATP-dependent RNA helicase Pl10, transcript variant X4
putative ATP-dependent RNA helicase Pl10, transcript variant X9
putative ATP-dependent RNA helicase Pl10, transcript variant X7
putative ATP-dependent RNA helicase Pl10, transcript variant X10
putative ATP-dependent RNA helicase Pl10, transcript variant X8
putative ATP-dependent RNA helicase Pl10, transcript variant X2
ATP-dependent RNA helicase DDX3X-like isoform X1
ATP-dependent RNA helicase DDX3X-like isoform X3
ATP-dependent RNA helicase DDX3X-like isoform X5
ATP-dependent RNA helicase DDX3X-like isoform X6
ATP-dependent RNA helicase DDX3X-like isoform X4
ATP-dependent RNA helicase DDX3X-like isoform X9
putative ATP-dependent RNA helicase Pl10 isoform X7
ATP-dependent RNA helicase DDX3X-like isoform X10
putative ATP-dependent RNA helicase Pl10 isoform X8
ATP-dependent RNA helicase DDX3X-like isoform X2
GMP synthase [glutamine-hydrolyzing]-like; Derived by automated computational analysis using gene prediction method: Gnomon.
GMP synthase [glutamine-hydrolyzing]-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 36 Proteins
GMP synthase [glutamine-hydrolyzing]-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 37 Proteins
GMP synthase [glutamine-hydrolyzing]-like, transcript variant X4
GMP synthase [glutamine-hydrolyzing]-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
GMP synthase [glutamine-hydrolyzing]-like, transcript variant X5
GMP synthase [glutamine-hydrolyzing]-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 37 Proteins
GMP synthase [glutamine-hydrolyzing]-like isoform X1
GMP synthase [glutamine-hydrolyzing]-like isoform X2
uncharacterized LOC128703893; Derived by automated computational analysis using gene prediction method: Gnomon.
F-box/LRR-repeat protein 20-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins
pterin-4-alpha-carbinolamine dehydratase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pterin-4-alpha-carbinolamine dehydratase-like
similar to RNA sequence, mRNA (same species):INSD:GADE01003019.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 415 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 302 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase arkadia-B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase arkadia-B-like, transcript variant X1
E3 ubiquitin-protein ligase arkadia-B-like, transcript variant X2
E3 ubiquitin-protein ligase arkadia-B-like, transcript variant X3
E3 ubiquitin-protein ligase arkadia-B-like isoform X1
E3 ubiquitin-protein ligase arkadia-C-like isoform X2
eukaryotic translation initiation factor eIF1; Derived by automated computational analysis using gene prediction method: Gnomon.
eukaryotic translation initiation factor eIF1
la-related protein 4B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: la-related protein 4B-like
uncharacterized LOC128703896; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703969; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads
ran-binding protein 9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ran-binding protein 9-like, transcript variant X1
ran-binding protein 9-like, transcript variant X2
hypoxia up-regulated protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
hypoxia up-regulated protein 1-like, transcript variant X2
hypoxia up-regulated protein 1-like, transcript variant X1
hypoxia up-regulated protein 1-like isoform X2
hypoxia up-regulated protein 1-like isoform X1
putative sodium-coupled neutral amino acid transporter 10; Derived by automated computational analysis using gene prediction method: Gnomon.
putative sodium-coupled neutral amino acid transporter 10
oxidoreductase NAD-binding domain-containing protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
oxidoreductase NAD-binding domain-containing protein 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: oxidoreductase NAD-binding domain-containing protein 1-like
zinc finger protein 236-like; Derived by automated computational analysis using gene prediction method: Gnomon.
28S ribosomal protein S22, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
28S ribosomal protein S22, mitochondrial-like, transcript variant X2
28S ribosomal protein S22, mitochondrial-like, transcript variant X1
28S ribosomal protein S22, mitochondrial-like isoform X2
28S ribosomal protein S22, mitochondrial-like isoform X1
uncharacterized LOC128703903; Derived by automated computational analysis using gene prediction method: Gnomon.
U6 snRNA-associated Sm-like protein LSm7; Derived by automated computational analysis using gene prediction method: Gnomon.
U6 snRNA-associated Sm-like protein LSm7
uncharacterized LOC128703904; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703905; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703907; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703908; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01008327.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; added 987 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; added 987 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128703908
uncharacterized LOC128703910; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703909; Derived by automated computational analysis using gene prediction method: Gnomon.
nucleolar transcription factor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
nucleolar transcription factor 1-like, transcript variant X1
nucleolar transcription factor 1-like, transcript variant X4
nucleolar transcription factor 1-like, transcript variant X3
nucleolar transcription factor 1-like, transcript variant X2
nucleolar transcription factor 1-like isoform X1
nucleolar transcription factor 1-like, transcript variant X5
nucleolar transcription factor 1-like, transcript variant X6
nucleolar transcription factor 1-like isoform X2
uncharacterized LOC128703912; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703912, transcript variant X2
uncharacterized LOC128703912, transcript variant X1
uncharacterized protein LOC128703912 isoform X2
uncharacterized protein LOC128703912 isoform X1
uncharacterized LOC128703972; Derived by automated computational analysis using gene prediction method: Gnomon.
glycine receptor subunit alpha-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
WD repeat-containing protein 11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
WD repeat-containing protein 11-like, transcript variant X1
WD repeat-containing protein 11-like, transcript variant X2
WD repeat-containing protein 11-like isoform X1
WD repeat-containing protein 11-like isoform X2
transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
cysteine-rich protein 2-binding protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cysteine-rich protein 2-binding protein-like
histone-lysine N-methyltransferase, H3 lysine-79 specific-like; Derived by automated computational analysis using gene prediction method: Gnomon.
histone-lysine N-methyltransferase, H3 lysine-79 specific-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase, H3 lysine-79 specific-like
lysine-specific demethylase 9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703957; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703917; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703917, transcript variant X1
uncharacterized LOC128703917, transcript variant X3
uncharacterized protein LOC128703917 isoform X1
uncharacterized LOC128703917, transcript variant X2
uncharacterized protein LOC128703917 isoform X2
DNA-directed RNA polymerases I, II, and III subunit RPABC1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA-directed RNA polymerases I, II, and III subunit RPABC1-like, transcript variant X3
DNA-directed RNA polymerases I, II, and III subunit RPABC1-like, transcript variant X2
DNA-directed RNA polymerases I, II, and III subunit RPABC1-like, transcript variant X1
DNA-directed RNA polymerases I, II, and III subunit RPABC1-like
uncharacterized LOC128703919; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128703919
protein SET-like; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA repair protein complementing XP-A cells-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins
DNA repair protein complementing XP-A cells homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA repair protein complementing XP-A cells homolog
uncharacterized LOC128703958; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703958, transcript variant X1
uncharacterized LOC128703958, transcript variant X2
uncharacterized LOC128703923; Derived by automated computational analysis using gene prediction method: Gnomon.
histone deacetylase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
histone deacetylase 1-like, transcript variant X1
histone deacetylase 1-like, transcript variant X2
probable histone deacetylase 1-B isoform X1
tyrosine-protein kinase SRK2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tyrosine-protein kinase SRK2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 3 Proteins
tyrosine-protein kinase SRK2-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 2 Proteins
tyrosine-protein kinase SRK2-like, transcript variant X6
tyrosine-protein kinase SRK2-like, transcript variant X7
tyrosine-protein kinase SRK2-like, transcript variant X9
tyrosine-protein kinase SRK2-like, transcript variant X8
tyrosine-protein kinase SRK2-like, transcript variant X10
tyrosine-protein kinase SRK2-like, transcript variant X11
tyrosine-protein kinase SRK2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
tyrosine-protein kinase SRK2-like, transcript variant X2
tyrosine-protein kinase SRK2-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
tyrosine-protein kinase SRK2-like isoform X1
tyrosine-protein kinase SRK2-like isoform X3
tyrosine-protein kinase SRK2-like isoform X4
tyrosine-protein kinase SRK2-like isoform X5
tyrosine-protein kinase Src64B-like isoform X7
tyrosine-protein kinase SRK2-like isoform X6
tyrosine-protein kinase Src64B-like isoform X8
tyrosine-protein kinase Src64B-like isoform X9
tyrosine-protein kinase SRK2-like isoform X2
E3 ubiquitin-protein ligase TRIP12-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02072684.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 678 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 678 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703931; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703930; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
serine/threonine-protein kinase 11-interacting protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
serine/threonine-protein kinase 11-interacting protein-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
serine/threonine-protein kinase 11-interacting protein-like, transcript variant X2
serine/threonine-protein kinase 11-interacting protein-like, transcript variant X1
serine/threonine-protein kinase 11-interacting protein-like isoform X3
serine/threonine-protein kinase 11-interacting protein-like isoform X2
uncharacterized protein LOC128703929 isoform X1
tyrosine-protein kinase Src42A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
inner centromere protein A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
inner centromere protein A-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 2 Proteins
inner centromere protein A-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 5 Proteins
inner centromere protein A-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 2 Proteins
inner centromere protein A-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 5 Proteins
inner centromere protein A-like, transcript variant X1
inner centromere protein A-like isoform X2
inner centromere protein A-like isoform X5
inner centromere protein-like isoform X3
inner centromere protein-like isoform X4
inner centromere protein A-like isoform X1
RNA N6-adenosine-methyltransferase METTL16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA N6-adenosine-methyltransferase METTL16-like
similar to RNA sequence (same species):INSD:HACK01020600.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 156 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 156 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703935; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703932; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins
eukaryotic initiation factor 4A-III; Derived by automated computational analysis using gene prediction method: Gnomon.
general vesicular transport factor p115-like; Derived by automated computational analysis using gene prediction method: Gnomon.
general vesicular transport factor p115-like
similar to RNA sequence (same species):INSD:HACB02031046.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; added 1546 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; added 1386 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: general vesicular transport factor p115-like
N-acetylgalactosaminyltransferase 7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
N-acetylgalactosaminyltransferase 7-like
60S ribosomal protein L11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
UPF0449 protein C19orf25 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
protein mago nashi homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
uncharacterized LOC128703937; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703937, transcript variant X3
uncharacterized LOC128703937, transcript variant X2
uncharacterized LOC128703937, transcript variant X4
uncharacterized LOC128703937, transcript variant X6
uncharacterized LOC128703937, transcript variant X1
uncharacterized LOC128703937, transcript variant X5
uncharacterized protein LOC128703937 isoform X2
uncharacterized protein LOC128703937 isoform X1
uncharacterized protein LOC128703937 isoform X3
U6atac minor spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00619
Derived by automated computational analysis using gene prediction method: cmsearch.
vacuolar protein sorting-associated protein 53 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
vacuolar protein sorting-associated protein 53 homolog
uncharacterized LOC128703959; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02027040.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 533 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 533 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703983; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703984; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128703984
WD repeat-containing protein 47-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703940; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703942; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128703986; Derived by automated computational analysis using gene prediction method: Gnomon.