Cherax quadricarinatus isolate HC-2022 chromosome 84, ASM2687515v2, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax.
REFSEQ INFORMATION: The reference sequence is identical to\nCM049278.1.\nAssembly name: ASM2687515v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang Academy of\nAgricultural Sciences on 2022/12/14. The original whole-genome\nshotgun project has the accession JAPQEV000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang Academy of Agricultural Sciences\nAssembly Method :: wtdbg2 v. 2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 108.71x\nSequencing Technology :: Illumina HiSeq; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_026875155.1-RS_2023_01\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 01/17/2023\n##Genome-Annotation-Data-END##
uncharacterized LOC128702827; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128702827
gastrula zinc finger protein XlCGF8.2DB-like; Derived by automated computational analysis using gene prediction method: Gnomon.
gastrula zinc finger protein XlCGF8.2DB-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon.
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X4
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X2
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X5
gastrula zinc finger protein XlCGF8.2DB-like, transcript variant X3
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ataxin-8-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01014082.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 328 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 328 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702912; Derived by automated computational analysis using gene prediction method: Gnomon.
cytochrome c oxidase subunit 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
mycosubtilin synthase subunit C-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: mycosubtilin synthase subunit C-like
RAC serine/threonine-protein kinase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RAC-beta serine/threonine-protein kinase B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RAC-beta serine/threonine-protein kinase B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
endoplasmic reticulum-Golgi intermediate compartment protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
endoplasmic reticulum-Golgi intermediate compartment protein 2-like
PAT complex subunit CCDC47-like; Derived by automated computational analysis using gene prediction method: Gnomon.
mucin-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
uncharacterized LOC128702903; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702904; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01032749.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 339 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 129 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
tuberin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon
uncharacterized LOC128702834; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads
uncharacterized LOC128702905; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
serine-rich adhesin for platelets-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
uncharacterized LOC128702836; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702836, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
uncharacterized LOC128702836, transcript variant X1
uncharacterized protein LOC128702836 isoform X2
uncharacterized protein LOC128702836 isoform X1
uncharacterized LOC128702839; Derived by automated computational analysis using gene prediction method: Gnomon.
microsomal glutathione S-transferase 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
microsomal glutathione S-transferase 3-like, transcript variant X2
microsomal glutathione S-transferase 3-like, transcript variant X1
microsomal glutathione S-transferase 3-like isoform X1
tetraspanin-2A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tetraspanin-2A-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins
microsomal glutathione S-transferase 3-like isoform X2
tetraspanin-2A-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins
probable imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein OZF-like; Derived by automated computational analysis using gene prediction method: Gnomon.
dynein axonemal heavy chain 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 6 Proteins
RAC serine/threonine-protein kinase-like
juvenile hormone esterase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
carboxylic ester hydrolase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
carboxylic ester hydrolase-like, transcript variant X3
similar to RNA sequence (same species):INSD:HACK01019655.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 355 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 179 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
venom carboxylesterase-6-like isoform X3
carboxylic ester hydrolase-like, transcript variant X1
carboxylic ester hydrolase-like, transcript variant X4
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 355 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
carboxylic ester hydrolase-like, transcript variant X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 355 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
venom carboxylesterase-6-like isoform X1
carboxylic ester hydrolase-like isoform X2
uncharacterized LOC128702845; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01040981.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 342 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 106 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
myb-like protein Q; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
protein bric-a-brac 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins
uncharacterized LOC128702911; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702913; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702917; Derived by automated computational analysis using gene prediction method: Gnomon.
cuticle protein 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702919; Derived by automated computational analysis using gene prediction method: Gnomon.
hemicentin-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
hemicentin-2-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
hemicentin-2-like, transcript variant X3
hemicentin-2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins
hemicentin-2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
5S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
G-protein coupled receptor dmsr-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
centaurin-gamma-1A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
centaurin-gamma-1A-like, transcript variant X1
centaurin-gamma-1A-like, transcript variant X2
centaurin-gamma-1A-like, transcript variant X3
uncharacterized LOC128702852; Derived by automated computational analysis using gene prediction method: Gnomon.
peptide methionine sulfoxide reductase MsrB-like; Derived by automated computational analysis using gene prediction method: Gnomon.
peptide methionine sulfoxide reductase MsrB-like, transcript variant X1
peptide methionine sulfoxide reductase MsrB-like, transcript variant X2
peptide methionine sulfoxide reductase MsrB-like isoform X2
peptide methionine sulfoxide reductase MsrB-like isoform X1
E3 ubiquitin-protein ligase arih1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 26 Proteins
MDS1 and EVI1 complex locus protein EVI1-A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
MDS1 and EVI1 complex locus protein EVI1-A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
exopolyphosphatase PRUNE1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
exopolyphosphatase PRUNE1-like, transcript variant X1
exopolyphosphatase PRUNE1-like, transcript variant X2
exopolyphosphatase PRUNE1-like, transcript variant X3
exopolyphosphatase PRUNE1-like isoform X1
exopolyphosphatase PRUNE1-like isoform X2
exopolyphosphatase PRUNE1-like isoform X3
uncharacterized LOC128702922; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702860; Derived by automated computational analysis using gene prediction method: Gnomon.
tRNA (adenine(37)-N6)-methyltransferase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tRNA (adenine(37)-N6)-methyltransferase-like, transcript variant X6
tRNA (adenine(37)-N6)-methyltransferase-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
tRNA (adenine(37)-N6)-methyltransferase-like, transcript variant X2
tRNA (adenine(37)-N6)-methyltransferase-like, transcript variant X5
tRNA (adenine(37)-N6)-methyltransferase-like, transcript variant X3
tRNA (adenine(37)-N6)-methyltransferase-like, transcript variant X1
tRNA (adenine(37)-N6)-methyltransferase-like
TGF-beta receptor type-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
TGF-beta receptor type-1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 36 Proteins
TGF-beta receptor type-1-like, transcript variant X1
TGF-beta receptor type-1-like, transcript variant X3
TGF-beta receptor type-1-like, transcript variant X4
TGF-beta receptor type-1-like, transcript variant X5
TGF-beta receptor type-1-like, transcript variant X6
TGF-beta receptor type-1-like, transcript variant X9
TGF-beta receptor type-1-like, transcript variant X7
TGF-beta receptor type-1-like, transcript variant X8
TGF-beta receptor type-1-like isoform X3
TGF-beta receptor type-1-like isoform X4
TGF-beta receptor type-1-like isoform X2
TGF-beta receptor type-1-like isoform X1
TGF-beta receptor type-1-like isoform X5
transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC128702923; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702914; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702915; Derived by automated computational analysis using gene prediction method: Gnomon.
putative gustatory receptor 28b; Derived by automated computational analysis using gene prediction method: Gnomon.
putative gustatory receptor 28b, transcript variant X1
putative gustatory receptor 28b, transcript variant X3
uncharacterized protein LOC128702916 isoform X1
putative gustatory receptor 28b isoform X3
putative gustatory receptor 28b, transcript variant X2
uncharacterized protein LOC128702916 isoform X2
sialin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
translationally-controlled tumor protein homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
translationally-controlled tumor protein homolog
myb/SANT-like DNA-binding domain-containing protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
myb/SANT-like DNA-binding domain-containing protein 3, transcript variant X1
myb/SANT-like DNA-binding domain-containing protein 3, transcript variant X2
myb/SANT-like DNA-binding domain-containing protein 3 isoform X2
myb/SANT-like DNA-binding domain-containing protein 3 isoform X1
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like, transcript variant X4
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like isoform X3
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like, transcript variant X3
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like, transcript variant X2
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like, transcript variant X1
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like isoform X2
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like isoform X1
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like, transcript variant X5
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase-like isoform X4
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial-like, transcript variant X2
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial-like, transcript variant X1
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial-like
RNA-binding protein 33-like; Derived by automated computational analysis using gene prediction method: Gnomon.
meiotic recombination protein DMC1/LIM15 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
meiotic recombination protein DMC1/LIM15 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
uncharacterized LOC128702868; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 4 Proteins
runt-related transcription factor 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
runt-related transcription factor 3-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
LOW QUALITY PROTEIN: runt-related transcription factor 3-like
protein FAM76A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein FAM76A-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins
protein FAM76A-like, transcript variant X2
protein FAM76A-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 40 Proteins
protein FAM76A-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins
protein FAM76A-like, transcript variant X5
uncharacterized LOC128702871; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
store-operated calcium entry-associated regulatory factor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
store-operated calcium entry-associated regulatory factor-like, transcript variant X2
store-operated calcium entry-associated regulatory factor-like, transcript variant X1
store-operated calcium entry-associated regulatory factor-like
serine/threonine-protein kinase ULK3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
serine/threonine-protein kinase ULK3-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: serine/threonine-protein kinase ULK3-like
(E3-independent) E2 ubiquitin-conjugating enzyme UBE2O-like; Derived by automated computational analysis using gene prediction method: Gnomon.
(E3-independent) E2 ubiquitin-conjugating enzyme UBE2O-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; substituted 4 bases at 4 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O-like
potassium voltage-gated channel protein Shaw-like; Derived by automated computational analysis using gene prediction method: Gnomon.
potassium voltage-gated channel protein Shaw-like
glutamate-gated chloride channel alpha-like; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate-gated chloride channel alpha-like
globin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sideroflexin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sideroflexin-1-like, transcript variant X5
sideroflexin-1-like, transcript variant X2
sideroflexin-1-like, transcript variant X1
sideroflexin-1-like, transcript variant X6
sideroflexin-1-like, transcript variant X4
sideroflexin-1-like, transcript variant X3
cyclin-H-like; Derived by automated computational analysis using gene prediction method: Gnomon.
metalloendopeptidase OMA1, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
metalloendopeptidase OMA1, mitochondrial-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins
metalloendopeptidase OMA1, mitochondrial-like, transcript variant X3
metalloendopeptidase OMA1, mitochondrial-like, transcript variant X1
metalloendopeptidase OMA1, mitochondrial-like, transcript variant X5
metalloendopeptidase OMA1, mitochondrial-like, transcript variant X4
metalloendopeptidase OMA1, mitochondrial-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein
metalloendopeptidase OMA1, mitochondrial-like isoform X2
metalloendopeptidase OMA1, mitochondrial-like isoform X1
metalloendopeptidase OMA1, mitochondrial-like isoform X3
carnitine O-palmitoyltransferase 1, liver isoform-like; Derived by automated computational analysis using gene prediction method: Gnomon.
carnitine O-palmitoyltransferase 1, liver isoform-like
similar to RNA sequence, mRNA (same species):INSD:MN265408.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 711 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 711 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01003551.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 2176 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 1620 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
peptidyl-prolyl cis-trans isomerase G-like; Derived by automated computational analysis using gene prediction method: Gnomon.
peptidyl-prolyl cis-trans isomerase G-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase G-like
probable G-protein coupled receptor Mth-like 3; Derived by automated computational analysis using gene prediction method: Gnomon.
probable G-protein coupled receptor Mth-like 3
similar to RNA sequence (same species):INSD:HACK01000733.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1134 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 967 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702881; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702881, transcript variant X3
uncharacterized LOC128702881, transcript variant X5
uncharacterized LOC128702881, transcript variant X6
uncharacterized LOC128702881, transcript variant X4
uncharacterized LOC128702881, transcript variant X2
uncharacterized LOC128702881, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads
uncharacterized protein LOC128702881 isoform X2
uncharacterized protein LOC128702881 isoform X1
uncharacterized protein LOC128702881 isoform X4
uncharacterized protein LOC128702881 isoform X3
uncharacterized protein LOC128702881 isoform X5
40S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence, mRNA (same species):INSD:GADE01016218.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 150 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 111 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
lys-63-specific deubiquitinase BRCC36-like; Derived by automated computational analysis using gene prediction method: Gnomon.
lys-63-specific deubiquitinase BRCC36-like, transcript variant X1
lys-63-specific deubiquitinase BRCC36-like, transcript variant X4
lys-63-specific deubiquitinase BRCC36-like, transcript variant X3
uncharacterized LOC128702888; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702888, transcript variant X2
uncharacterized LOC128702888, transcript variant X1
uncharacterized LOC128702888, transcript variant X3
ribonuclease P protein subunit p20-like; Derived by automated computational analysis using gene prediction method: Gnomon.
26S proteasome regulatory subunit 6B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
26S proteasome regulatory subunit 6B-like
uncharacterized LOC128702884; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702885; Derived by automated computational analysis using gene prediction method: Gnomon.
lys-63-specific deubiquitinase BRCC36-like, transcript variant X2
lys-63-specific deubiquitinase BRCC36-like isoform X1
lys-63-specific deubiquitinase BRCC36-like isoform X2
lysosomal-associated transmembrane protein 4A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
lysosomal-associated transmembrane protein 4A-like, transcript variant X3
lysosomal-associated transmembrane protein 4A-like, transcript variant X1
tetraspanning orphan receptor-like isoform X1
lysosomal-associated transmembrane protein 4A-like, transcript variant X2
lysosomal-associated transmembrane protein 4A-like isoform X2
lysosomal-associated transmembrane protein 4A-like isoform X3
COP9 signalosome complex subunit 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
COP9 signalosome complex subunit 5-like, transcript variant X1
COP9 signalosome complex subunit 5-like, transcript variant X2
probable G-protein coupled receptor Mth-like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
probable G-protein coupled receptor Mth-like 1
uncharacterized LOC128702892; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02054195.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 379 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 193 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
putative uncharacterized protein DDB_G0268364; Derived by automated computational analysis using gene prediction method: Gnomon.
putative uncharacterized protein DDB_G0268364
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: putative uncharacterized protein DDB_G0268364
uncharacterized LOC128702933; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 1-like, transcript variant X2
zinc finger protein 1-like, transcript variant X1
uncharacterized LOC128702894; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702894, transcript variant X1
uncharacterized LOC128702894, transcript variant X2
uncharacterized LOC128702934; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128702934
uncharacterized LOC128702935; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128702936; Derived by automated computational analysis using gene prediction method: Gnomon.
histone-lysine N-methyltransferase PRDM16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
histone-lysine N-methyltransferase PRDM16-like
U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00003
nuclear receptor coactivator 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
toll-like receptor 6; Derived by automated computational analysis using gene prediction method: Gnomon.