Cherax quadricarinatus isolate HC-2022 chromosome 24, ASM2687515v2, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax.
REFSEQ INFORMATION: The reference sequence is identical to\nCM049218.1.\nAssembly name: ASM2687515v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang Academy of\nAgricultural Sciences on 2022/12/14. The original whole-genome\nshotgun project has the accession JAPQEV000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang Academy of Agricultural Sciences\nAssembly Method :: wtdbg2 v. 2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 108.71x\nSequencing Technology :: Illumina HiSeq; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_026875155.1-RS_2023_01\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 01/17/2023\n##Genome-Annotation-Data-END##
myb/SANT-like DNA-binding domain-containing protein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
myb/SANT-like DNA-binding domain-containing protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon.
putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007; Derived by automated computational analysis using gene prediction method: Gnomon.
putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
uncharacterized LOC128689906; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 271-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689969; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689969, transcript variant X2
uncharacterized LOC128689969, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pre-mRNA cleavage complex 2 protein Pcf11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pre-mRNA cleavage complex 2 protein Pcf11-like
lachesin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
nephrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
hemicentin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
nectin-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689907; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC128689972; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial nicotinamide adenine dinucleotide transporter SLC25A51-like; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial nicotinamide adenine dinucleotide transporter SLC25A51-like
uncharacterized LOC128689903; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128689903
uncharacterized LOC128689908; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc metalloproteinase nas-15-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
uncharacterized LOC128689924; Derived by automated computational analysis using gene prediction method: Gnomon.
pyrethroid hydrolase Ces2a-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: pyrethroid hydrolase Ces2a-like
juvenile hormone esterase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02082225.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 491 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 491 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689975; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689926; Derived by automated computational analysis using gene prediction method: Gnomon.
aminopeptidase N-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins
beta-taxilin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689976; Derived by automated computational analysis using gene prediction method: Gnomon.
tigger transposable element-derived protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
oxalate:formate antiporter-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689909; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689931; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
uncharacterized LOC128689932; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689910; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689911; Derived by automated computational analysis using gene prediction method: Gnomon.
cytochrome c oxidase subunit NDUFA4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cytochrome c oxidase subunit NDUFA4-like
vacuolar protein sorting-associated protein 16 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
vacuolar protein sorting-associated protein 16 homolog
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 16 homolog
putative mediator of RNA polymerase II transcription subunit 26; Derived by automated computational analysis using gene prediction method: Gnomon.
putative mediator of RNA polymerase II transcription subunit 26, transcript variant X2
putative mediator of RNA polymerase II transcription subunit 26, transcript variant X1
putative mediator of RNA polymerase II transcription subunit 26 isoform X2
putative mediator of RNA polymerase II transcription subunit 26 isoform X1
uncharacterized LOC128689981; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689982; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689980; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689980, transcript variant X2
uncharacterized LOC128689980, transcript variant X1
uncharacterized protein LOC128689980 isoform X2
uncharacterized protein LOC128689980 isoform X1
helix-loop-helix protein ngn-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
cholinesterase 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01016611.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 579 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 508 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
venom carboxylesterase-6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
uncharacterized LOC128689987; Derived by automated computational analysis using gene prediction method: Gnomon.
putative inactive carboxylesterase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
adhesive plaque matrix protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02056131.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 65 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 65 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
similar to RNA sequence (same species):INSD:HACB02039229.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 319 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 216 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689988; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689939; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689940; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
LOW QUALITY PROTEIN: uncharacterized protein LOC128689940
uncharacterized LOC128689941; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
neurogenic differentiation factor 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
neurogenic differentiation factor 4-like
40S ribosomal protein SA-like; Derived by automated computational analysis using gene prediction method: Gnomon.
40S ribosomal protein SA-like, transcript variant X2
40S ribosomal protein SA-like, transcript variant X1
40S ribosomal protein SA-like, transcript variant X3
40S ribosomal protein SA-like isoform X1
40S ribosomal protein SA-like isoform X2
uncharacterized LOC128689990; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized oxidoreductase YjmC-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized oxidoreductase YjmC-like, transcript variant X1
uncharacterized oxidoreductase YjmC-like, transcript variant X4
uncharacterized oxidoreductase YjmC-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
uncharacterized oxidoreductase YjmC-like, transcript variant X5
uncharacterized oxidoreductase YjmC-like, transcript variant X2
uncharacterized oxidoreductase YjmC-like isoform X1
uncharacterized oxidoreductase YjmC-like isoform X3
uncharacterized oxidoreductase YjmC-like isoform X4
uncharacterized oxidoreductase YjmC-like isoform X5
uncharacterized oxidoreductase YjmC-like isoform X2
maspardin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein inscuteable homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
protein inscuteable homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 5 Proteins
protein inscuteable homolog, transcript variant X1
uncharacterized LOC128689943; Derived by automated computational analysis using gene prediction method: Gnomon.
cyclin-dependent kinase 14-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: cyclin-dependent kinase 14-like
probable ATP-dependent RNA helicase DDX41; Derived by automated computational analysis using gene prediction method: Gnomon.
probable ATP-dependent RNA helicase DDX41, transcript variant X1
probable ATP-dependent RNA helicase DDX41, transcript variant X3
probable ATP-dependent RNA helicase DDX41, transcript variant X2
probable ATP-dependent RNA helicase DDX41, transcript variant X5
probable ATP-dependent RNA helicase DDX41, transcript variant X4
ATP-dependent RNA helicase abstrakt-like isoform X1
probable ATP-dependent RNA helicase DDX41, transcript variant X7
probable ATP-dependent RNA helicase DDX41, transcript variant X6
probable ATP-dependent RNA helicase DDX41 isoform X2
ribosome biogenesis protein BMS1 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
ribosome biogenesis protein BMS1 homolog, transcript variant X1
ribosome biogenesis protein BMS1 homolog, transcript variant X3
ribosome biogenesis protein BMS1 homolog, transcript variant X2
ribosome biogenesis protein BMS1 homolog isoform X2
ribosome biogenesis protein BMS1 homolog isoform X1
helix-loop-helix protein delilah-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
anti-lipopolysaccharide factor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
organic cation transporter protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
EGFR adapter protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
EGFR adapter protein-like, transcript variant X2
EGFR adapter protein-like, transcript variant X1
EGFR adapter protein-like, transcript variant X3
U4 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00015
Derived by automated computational analysis using gene prediction method: cmsearch.
uncharacterized LOC128690001; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized proline-rich protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized proline-rich protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
general transcription factor 3C polypeptide 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
general transcription factor 3C polypeptide 3-like, transcript variant X8
general transcription factor 3C polypeptide 3-like, transcript variant X4
general transcription factor 3C polypeptide 3-like, transcript variant X5
general transcription factor 3C polypeptide 3-like, transcript variant X2
general transcription factor 3C polypeptide 3-like, transcript variant X3
general transcription factor 3C polypeptide 3-like, transcript variant X10
general transcription factor 3C polypeptide 3-like, transcript variant X9
general transcription factor 3C polypeptide 3-like, transcript variant X6
general transcription factor 3C polypeptide 3-like, transcript variant X7
general transcription factor 3C polypeptide 3-like, transcript variant X1
general transcription factor 3C polypeptide 3-like, transcript variant X11
general transcription factor 3C polypeptide 3-like isoform X4
general transcription factor 3C polypeptide 3-like isoform X2
general transcription factor 3C polypeptide 3-like isoform X3
general transcription factor 3C polypeptide 3-like isoform X1
general transcription factor 3C polypeptide 3-like isoform X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins
uncharacterized LOC128690004; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690005; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690005, transcript variant X2
uncharacterized LOC128690005, transcript variant X1
uncharacterized protein LOC128690005 isoform X2
uncharacterized protein LOC128690005 isoform X1
uncharacterized LOC128689947; Derived by automated computational analysis using gene prediction method: Gnomon.
cuticlin-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
septin-9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger CCCH domain-containing protein 14-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger CCCH domain-containing protein 14-like
THUMP domain-containing protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 33 Proteins
uncharacterized LOC128689951; Derived by automated computational analysis using gene prediction method: Gnomon.
5S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00001
uncharacterized LOC128690008; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690008, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 4 Proteins
uncharacterized LOC128690008, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins
uncharacterized protein LOC128690008 isoform X1
uncharacterized protein LOC128690008 isoform X2
uncharacterized LOC128690009; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690009, transcript variant X3
uncharacterized LOC128690009, transcript variant X4
uncharacterized LOC128690009, transcript variant X1
uncharacterized LOC128690009, transcript variant X2
uncharacterized LOC128689918; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689919; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
uncharacterized LOC128689952; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 3 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 3 codons; substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128689952
uncharacterized LOC128690010; Derived by automated computational analysis using gene prediction method: Gnomon.
synaptopodin-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
synaptopodin-2-like, transcript variant X4
synaptopodin-2-like, transcript variant X3
synaptopodin-2-like, transcript variant X5
synaptopodin-2-like, transcript variant X7
synaptopodin-2-like, transcript variant X2
synaptopodin-2-like, transcript variant X6
synaptopodin-2-like, transcript variant X1
synaptopodin-2-like, transcript variant X10
synaptopodin-2-like, transcript variant X11
synaptopodin-2-like, transcript variant X9
synaptopodin-2-like, transcript variant X8
uncharacterized protein LOC128690012 isoform X3
uncharacterized protein LOC128690012 isoform X2
uncharacterized LOC128690013; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690015; Derived by automated computational analysis using gene prediction method: Gnomon.
ecdysone receptor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ecdysone receptor-like, transcript variant X3
ecdysone receptor-like, transcript variant X2
ecdysone receptor-like, transcript variant X1
ecdysone receptor-like, transcript variant X4
dachshund homolog 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
dachshund homolog 1-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins
dachshund homolog 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins
dachshund homolog 1-like, transcript variant X2
dachshund homolog 1-like, transcript variant X1
dachshund homolog 1-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 7 Proteins
dachshund homolog 1-like, transcript variant X5
dachshund homolog 1-like, transcript variant X6
dachshund homolog 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
dachshund homolog 2-like, transcript variant X2
dachshund homolog 2-like, transcript variant X4
dachshund homolog 2-like, transcript variant X3
dachshund homolog 2-like, transcript variant X1
39S ribosomal protein L23, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
39S ribosomal protein L23, mitochondrial-like
carnitine O-palmitoyltransferase 2, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
carnitine O-palmitoyltransferase 2, mitochondrial-like, transcript variant X2
carnitine O-palmitoyltransferase 2, mitochondrial-like, transcript variant X3
carnitine O-palmitoyltransferase 2, mitochondrial-like, transcript variant X1
carnitine O-palmitoyltransferase 2, mitochondrial-like isoform X1
carnitine O-palmitoyltransferase 2, mitochondrial-like isoform X2
cotranscriptional regulator FAM172A homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
cotranscriptional regulator FAM172A homolog, transcript variant X2
cotranscriptional regulator FAM172A homolog isoform X2
cotranscriptional regulator FAM172A homolog, transcript variant X1
uncharacterized LOC128690023; Derived by automated computational analysis using gene prediction method: Gnomon.
cotranscriptional regulator FAM172A homolog isoform X1
uncharacterized LOC128690024; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor subfamily 2 group F member 1-A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor subfamily 2 group F member 1-A-like
similar to RNA sequence (same species):INSD:HACK01014252.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 75 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 75 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690026; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689953; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane protein 242-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane protein 242-like, transcript variant X1
transmembrane protein 242-like, transcript variant X2
transmembrane protein 242-like isoform X1
transmembrane protein 242-like isoform X2
uncharacterized LOC128689954; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690031; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690031, transcript variant X3
uncharacterized protein LOC128690031 isoform X3
uncharacterized LOC128690031, transcript variant X1
uncharacterized protein LOC128690031 isoform X1
uncharacterized LOC128690031, transcript variant X2
uncharacterized protein LOC128690031 isoform X2
uncharacterized LOC128690029; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein
uncharacterized LOC128690030; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690028; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690032; Derived by automated computational analysis using gene prediction method: Gnomon.
cadherin-87A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
uncharacterized LOC128690035; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690035, transcript variant X2
uncharacterized LOC128690035, transcript variant X1
uncharacterized protein LOC128690035 isoform X1
uncharacterized protein LOC128690035 isoform X2
pyrokinin-1 receptor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
tyrosine-protein kinase Dnt-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tyrosine-protein kinase Dnt-like, transcript variant X2
tyrosine-protein kinase Dnt-like, transcript variant X1
tyrosine-protein kinase Dnt-like, transcript variant X3
uncharacterized LOC128689956; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
sarcoplasmic calcium-binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
sarcoplasmic calcium-binding protein 1, transcript variant X4
sarcoplasmic calcium-binding protein 1, transcript variant X3
sarcoplasmic calcium-binding protein 1, transcript variant X1
sarcoplasmic calcium-binding protein 1, transcript variant X2
sarcoplasmic calcium-binding protein isoform X3
sarcoplasmic calcium-binding protein 1 isoform X1
sarcoplasmic calcium-binding protein 1 isoform X4
sarcoplasmic calcium-binding protein 1 isoform X2
ras-related protein Rab-9A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ras-related protein Rab-9A-like, transcript variant X6
ras-related protein Rab-9A-like, transcript variant X3
ras-related protein Rab-9A-like, transcript variant X2
ras-related protein Rab-9A-like, transcript variant X7
ras-related protein Rab-9A-like, transcript variant X1
ras-related protein Rab-9A-like, transcript variant X4
ras-related protein Rab-9A-like, transcript variant X5
ras-related protein Rab-9A-like isoform X1
ras-related protein Rab-9A-like isoform X2
tigger transposable element-derived protein 1-like
uncharacterized LOC128690040; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690040, transcript variant X1
uncharacterized LOC128690040, transcript variant X4
uncharacterized LOC128690040, transcript variant X3
uncharacterized LOC128690040, transcript variant X2
uncharacterized protein LOC128690040 isoform X1
uncharacterized protein LOC128690040 isoform X2
uncharacterized LOC128690041; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690041, transcript variant X1
uncharacterized LOC128690041, transcript variant X2
uncharacterized protein LOC128690041 isoform X1
uncharacterized protein LOC128690041 isoform X2
stromal interaction molecule homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
stromal interaction molecule homolog, transcript variant X2
stromal interaction molecule homolog, transcript variant X4
stromal interaction molecule homolog, transcript variant X1
stromal interaction molecule homolog, transcript variant X3
stromal interaction molecule homolog, transcript variant X6
stromal interaction molecule homolog, transcript variant X5
stromal interaction molecule homolog isoform X1
stromal interaction molecule homolog isoform X2
stromal interaction molecule homolog isoform X3
stromal interaction molecule homolog isoform X4
stromal interaction molecule homolog isoform X5
stromal interaction molecule homolog isoform X6
similar to RNA sequence (same species):INSD:HACK01022647.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 997 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 876 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690045; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690045, transcript variant X4
uncharacterized LOC128690045, transcript variant X3
uncharacterized LOC128690045, transcript variant X1
uncharacterized LOC128690045, transcript variant X2
uncharacterized protein LOC128690045 isoform X1
uncharacterized protein LOC128690045 isoform X3
uncharacterized protein LOC128690045 isoform X2
uncharacterized protein LOC128690045 isoform X4
cytochrome c oxidase subunit 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690046; Derived by automated computational analysis using gene prediction method: Gnomon.
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like
anaphase-promoting complex subunit 7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
anaphase-promoting complex subunit 7-like
similar to RNA sequence (same species):INSD:HACK01021189.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 572 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 459 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
cytochrome b-c1 complex subunit 2, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cytochrome b-c1 complex subunit 2, mitochondrial-like
similar to RNA sequence, mRNA (same species):INSD:GADE01003695.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 127 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 127 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 84-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins
uncharacterized LOC128690051; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01064569.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 114 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins
ubiquitin-associated domain-containing protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin-associated domain-containing protein 2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ubiquitin-associated domain-containing protein 2-like
uroporphyrinogen-III synthase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uroporphyrinogen-III synthase-like, transcript variant X2
uroporphyrinogen-III synthase-like, transcript variant X3
uroporphyrinogen-III synthase-like, transcript variant X1
uroporphyrinogen-III synthase-like isoform X1
uroporphyrinogen-III synthase-like, transcript variant X5
uroporphyrinogen-III synthase-like, transcript variant X4
uroporphyrinogen-III synthase-like, transcript variant X6
uroporphyrinogen-III synthase-like isoform X2
importin subunit beta-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
importin subunit beta-1-like, transcript variant X2
similar to RNA sequence (same species):INSD:HACK01003259.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 186 bases not found in genome assembly
importin subunit beta-1-like, transcript variant X3
importin subunit beta-1-like, transcript variant X4
importin subunit beta-1-like, transcript variant X5
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 102 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
importin subunit beta-1-like, transcript variant X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 186 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
acetyl-coenzyme A synthetase, cytoplasmic-like; Derived by automated computational analysis using gene prediction method: Gnomon.
acetyl-coenzyme A synthetase, cytoplasmic-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: acetyl-coenzyme A synthetase, cytoplasmic-like
methyl-CpG-binding domain protein 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
methyl-CpG-binding domain protein 4-like, transcript variant X4
methyl-CpG-binding domain protein 4-like, transcript variant X2
methyl-CpG-binding domain protein 4-like isoform X2
methyl-CpG-binding domain protein 4-like, transcript variant X3
methyl-CpG-binding domain protein 4-like, transcript variant X1
methyl-CpG-binding domain protein 4-like isoform X1
methyl-CpG-binding domain protein 4-like isoform X3
phosphomevalonate kinase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphomevalonate kinase-like, transcript variant X1
phosphomevalonate kinase-like, transcript variant X2
phosphomevalonate kinase-like isoform X1
phosphomevalonate kinase-like, transcript variant X3
phosphomevalonate kinase-like isoform X2
zinc finger and BTB domain-containing protein 24-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain-containing protein 24-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 24-like
neuropeptide CCHamide-1 receptor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690058; Derived by automated computational analysis using gene prediction method: Gnomon.
AP-4 complex subunit beta-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: AP-4 complex subunit beta-1-like
transmembrane protein 248-like; Derived by automated computational analysis using gene prediction method: Gnomon.
dnaJ homolog subfamily C member 21-like; Derived by automated computational analysis using gene prediction method: Gnomon.
exosome RNA helicase MTR4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA-binding protein 8A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA-binding protein 8A-like, transcript variant X3
RNA-binding protein 8A-like, transcript variant X2
RNA-binding protein 8A-like, transcript variant X1
uncharacterized LOC128689962; Derived by automated computational analysis using gene prediction method: Gnomon.
tonsoku-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
tonsoku-like protein, transcript variant X1
tonsoku-like protein, transcript variant X2
tonsoku-like protein, transcript variant X3
tonsoku-like protein, transcript variant X4
transient receptor potential channel pyrexia-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transient receptor potential channel pyrexia-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transient receptor potential channel pyrexia-like
recQ-mediated genome instability protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
recQ-mediated genome instability protein 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein
recQ-mediated genome instability protein 1-like, transcript variant X4
recQ-mediated genome instability protein 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins
recQ-mediated genome instability protein 1-like, transcript variant X2
recQ-mediated genome instability protein 1-like isoform X3
recQ-mediated genome instability protein 1-like isoform X4
recQ-mediated genome instability protein 1-like isoform X1
recQ-mediated genome instability protein 1-like isoform X2
dual specificity protein phosphatase 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
dual specificity protein phosphatase 3-like, transcript variant X2
dual specificity protein phosphatase 3-like, transcript variant X3
dual specificity protein phosphatase 3-like, transcript variant X1
dual specificity protein phosphatase 3-like, transcript variant X5
dual specificity protein phosphatase 3-like, transcript variant X4
dual specificity protein phosphatase 3-like
major facilitator superfamily domain-containing protein 8-like; Derived by automated computational analysis using gene prediction method: Gnomon.
major facilitator superfamily domain-containing protein 8-like
rho GDP-dissociation inhibitor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
rho GDP-dissociation inhibitor 1-like, transcript variant X1
rho GDP-dissociation inhibitor 1-like, transcript variant X2
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like; Derived by automated computational analysis using gene prediction method: Gnomon.
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like, transcript variant X2
similar to RNA sequence (same species):INSD:HACK01011087.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 139 bases not found in genome assembly
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like, transcript variant X1
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 139 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
nascent polypeptide-associated complex subunit alpha, muscle-specific form-like isoform X1
putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007, transcript variant X4
putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007, transcript variant X3
putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007, transcript variant X2
putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads
uncharacterized LOC128690073; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690073, transcript variant X2
uncharacterized LOC128690073, transcript variant X1
uncharacterized protein LOC128690073 isoform X1
uncharacterized protein LOC128690073 isoform X2
uncharacterized LOC128690074; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690072; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690072, transcript variant X2
uncharacterized LOC128690072, transcript variant X1
uncharacterized LOC128690076; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690076, transcript variant X1
similar to RNA sequence (same species):INSD:HACK01033041.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 296 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
uncharacterized LOC128690076, transcript variant X3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 296 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128690076, transcript variant X2
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 234 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized protein LOC128690076 isoform X1
uncharacterized protein LOC128690076 isoform X2
uncharacterized protein LOC128690076 isoform X3
uncharacterized LOC128690077; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689964; Derived by automated computational analysis using gene prediction method: Gnomon.
integrator complex subunit 8-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128689966; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128689966