Cherax quadricarinatus isolate HC-2022 chromosome 20, ASM2687515v2, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax.
REFSEQ INFORMATION: The reference sequence is identical to\nCM049214.1.\nAssembly name: ASM2687515v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang Academy of\nAgricultural Sciences on 2022/12/14. The original whole-genome\nshotgun project has the accession JAPQEV000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang Academy of Agricultural Sciences\nAssembly Method :: wtdbg2 v. 2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 108.71x\nSequencing Technology :: Illumina HiSeq; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_026875155.1-RS_2023_01\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 01/17/2023\n##Genome-Annotation-Data-END##
60S ribosomal protein L37a-like; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688823; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688834; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688834, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins
uncharacterized protein LOC128688834 isoform X1
uncharacterized LOC128688834, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads
uncharacterized protein LOC128688834 isoform X2
transient receptor potential cation channel subfamily A member 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transient receptor potential cation channel subfamily A member 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
uncharacterized LOC128688836; Derived by automated computational analysis using gene prediction method: Gnomon.
protein SpAN-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
uncharacterized LOC128688837; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688837, transcript variant X3
uncharacterized LOC128688837, transcript variant X1
uncharacterized LOC128688837, transcript variant X2
uncharacterized protein LOC128688837 isoform X1
uncharacterized protein LOC128688837 isoform X2
proteasome activator complex subunit 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
proteasome activator complex subunit 3-like
proteoglycan 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688839; Derived by automated computational analysis using gene prediction method: Gnomon.
CAAX prenyl protease 1 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
CAAX prenyl protease 1 homolog, transcript variant X2
CAAX prenyl protease 1 homolog, transcript variant X1
CAAX prenyl protease 1 homolog isoform X1
CAAX prenyl protease 1 homolog isoform X2
dnaJ homolog subfamily C member 16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688843; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688843, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
C-type lectin domain family 4 member D-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 4 member D-like
uncharacterized LOC128688845; Derived by automated computational analysis using gene prediction method: Gnomon.
bystin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01023802.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 240 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 60 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688971; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02058564.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; added 732 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; added 573 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128688971
ras-related and estrogen-regulated growth inhibitor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ras-related and estrogen-regulated growth inhibitor-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins
enoyl-CoA hydratase, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02049089.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; added 238 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; added 116 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: enoyl-CoA hydratase, mitochondrial-like
uncharacterized LOC128688852; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688843, transcript variant X2
uncharacterized LOC128688843, transcript variant X1
uncharacterized LOC128688843, transcript variant X6
uncharacterized LOC128688843, transcript variant X3
uncharacterized LOC128688843, transcript variant X4
uncharacterized protein LOC128688843 isoform X1
uncharacterized protein LOC128688843 isoform X2
zinc finger and BTB domain-containing protein 24-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain-containing protein 24-like, transcript variant X2
zinc finger and BTB domain-containing protein 24-like, transcript variant X1
zinc finger and BTB domain-containing protein 24-like, transcript variant X3
zinc finger and BTB domain-containing protein 24-like
zinc finger protein 665-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
hydroxysteroid dehydrogenase-like protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
hydroxysteroid dehydrogenase-like protein 2
ras-like GTP-binding protein RhoL; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription intermediary factor 1-alpha-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription intermediary factor 1-alpha-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transcription intermediary factor 1-alpha-like
protein disulfide-isomerase A4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688856; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688856, transcript variant X3
uncharacterized LOC128688856, transcript variant X2
uncharacterized LOC128688856, transcript variant X4
uncharacterized LOC128688856, transcript variant X7
uncharacterized LOC128688856, transcript variant X5
uncharacterized LOC128688856, transcript variant X6
uncharacterized LOC128688856, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins
uncharacterized protein LOC128688856 isoform X2
uncharacterized protein LOC128688856 isoform X1
uncharacterized protein LOC128688856 isoform X3
uncharacterized protein LOC128688856 isoform X4
uncharacterized LOC128688858; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688858, transcript variant X1
uncharacterized LOC128688858, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins
uncharacterized protein LOC128688858 isoform X1
uncharacterized protein LOC128688858 isoform X2
acyl-coenzyme A synthetase ACSM3, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
acyl-coenzyme A synthetase ACSM3, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins
GRIP and coiled-coil domain-containing protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
GRIP and coiled-coil domain-containing protein 2-like, transcript variant X1
GRIP and coiled-coil domain-containing protein 2-like, transcript variant X3
GRIP and coiled-coil domain-containing protein 2-like, transcript variant X4
GRIP and coiled-coil domain-containing protein 2-like, transcript variant X5
GRIP and coiled-coil domain-containing protein 2-like, transcript variant X2
GRIP and coiled-coil domain-containing protein 2-like isoform X1
GRIP and coiled-coil domain-containing protein 2-like isoform X4
nuclear mitotic apparatus protein 1-like isoform X5
GRIP and coiled-coil domain-containing protein 2-like isoform X2
GRIP and coiled-coil domain-containing protein 2-like isoform X3
uncharacterized LOC128688861; Derived by automated computational analysis using gene prediction method: Gnomon.
gastric triacylglycerol lipase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
nuclear pore complex protein Nup153-like; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear pore complex protein Nup153-like
similar to RNA sequence (same species):INSD:HACK01010196.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1045 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 1045 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688864; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128688864
dentin sialophosphoprotein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
dentin sialophosphoprotein-like, transcript variant X2
dentin sialophosphoprotein-like, transcript variant X1
dentin sialophosphoprotein-like, transcript variant X3
dentin sialophosphoprotein-like isoform X2
dentin sialophosphoprotein-like isoform X1
dentin sialophosphoprotein-like isoform X3
TRAF3-interacting protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
prominin-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
prominin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
centrosomal protein of 290 kDa-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02023509.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 328 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 314 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
regulator of G-protein signaling 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
regulator of G-protein signaling 2-like, transcript variant X1
regulator of G-protein signaling 2-like isoform X1
regulator of G-protein signaling 2-like, transcript variant X2
regulator of G-protein signaling 2-like isoform X2
high choriolytic enzyme 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC128688870; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688773; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688871; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688871, transcript variant X2
uncharacterized LOC128688871, transcript variant X1
uncharacterized protein LOC128688871 isoform X2
uncharacterized protein LOC128688871 isoform X1
protein yippee-like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
protein yippee-like 2, transcript variant X1
ribosomal protein 63, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ribosomal protein 63, mitochondrial-like, transcript variant X2
ribosomal protein 63, mitochondrial-like, transcript variant X1
ribosomal protein 63, mitochondrial-like isoform X2
ribosomal protein 63, mitochondrial-like isoform X1
probable small nuclear ribonucleoprotein Sm D1; Derived by automated computational analysis using gene prediction method: Gnomon.
probable small nuclear ribonucleoprotein Sm D1
RING-type E3 ubiquitin-protein ligase PPIL2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RING-type E3 ubiquitin-protein ligase PPIL2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: RING-type E3 ubiquitin-protein ligase PPIL2-like
uncharacterized LOC128688774; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128688774
PHD finger protein 12-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688875; Derived by automated computational analysis using gene prediction method: Gnomon.
NADH-ubiquinone oxidoreductase 49 kDa subunit-like; Derived by automated computational analysis using gene prediction method: Gnomon.
NADH-ubiquinone oxidoreductase 49 kDa subunit-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
protein yippee-like 2, transcript variant X2
E3 ubiquitin-protein ligase Mdm2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase Mdm2-like, transcript variant X3
E3 ubiquitin-protein ligase Mdm2-like, transcript variant X2
E3 ubiquitin-protein ligase Mdm2-like, transcript variant X1
E3 ubiquitin-protein ligase Mdm2-like isoform X1
E3 ubiquitin-protein ligase Mdm2-like isoform X2
uncharacterized protein LOC128688879 isoform X3
importin subunit alpha-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: importin subunit alpha-1-like
beta-arrestin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: beta-arrestin-1-like
uncharacterized LOC128688883; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688884; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688884, transcript variant X2
uncharacterized LOC128688884, transcript variant X3
uncharacterized LOC128688884, transcript variant X1
uncharacterized LOC128688885; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688886; Derived by automated computational analysis using gene prediction method: Gnomon.
carbohydrate sulfotransferase 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688887; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688887, transcript variant X1
uncharacterized LOC128688887, transcript variant X2
uncharacterized protein LOC128688887 isoform X1
uncharacterized protein LOC128688887 isoform X2
zinc finger protein ZFP2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein ZFP2-like, transcript variant X3
zinc finger protein ZFP2-like, transcript variant X1
zinc finger protein ZFP2-like, transcript variant X2
zinc finger protein 675-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688892; Derived by automated computational analysis using gene prediction method: Gnomon.
myoneurin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01016690.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 751 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 693 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688894; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688894, transcript variant X3
similar to RNA sequence (same species):INSD:HACK01011566.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 879 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins
uncharacterized LOC128688894, transcript variant X2
uncharacterized LOC128688894, transcript variant X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 879 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins
uncharacterized LOC128688894, transcript variant X4
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 738 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
putative defense protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcription factor A, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription factor A, mitochondrial-like
protein O-glucosyltransferase 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
acetyl-CoA acetyltransferase, cytosolic-like; Derived by automated computational analysis using gene prediction method: Gnomon.
acetyl-CoA acetyltransferase, cytosolic-like
similar to RNA sequence (same species):INSD:HACK01014339.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 374 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 284 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
activin receptor type-2A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
activin receptor type-2A-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
activin receptor type-2A-like, transcript variant X6
activin receptor type-2A-like, transcript variant X1
activin receptor type-2A-like, transcript variant X2
activin receptor type-2A-like, transcript variant X4
activin receptor type-2A-like, transcript variant X5
activin receptor type-2A-like isoform X2
activin receptor type-2A-like isoform X3
activin receptor type-2A-like isoform X1
dynein heavy chain, cytoplasmic-like; Derived by automated computational analysis using gene prediction method: Gnomon.
dynein heavy chain, cytoplasmic-like, transcript variant X2
dynein heavy chain, cytoplasmic-like, transcript variant X6
dynein heavy chain, cytoplasmic-like, transcript variant X1
dynein heavy chain, cytoplasmic-like, transcript variant X3
dynein heavy chain, cytoplasmic-like, transcript variant X4
dynein heavy chain, cytoplasmic-like, transcript variant X5
dynein heavy chain, cytoplasmic-like isoform X1
dynein heavy chain, cytoplasmic-like isoform X3
dynein heavy chain, cytoplasmic-like isoform X4
dynein heavy chain, cytoplasmic-like isoform X5
dynein heavy chain, cytoplasmic-like isoform X2
dynein heavy chain, cytoplasmic-like isoform X6
chromosome-associated kinesin KIF4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
echinoderm microtubule-associated protein-like 5; Derived by automated computational analysis using gene prediction method: Gnomon.
echinoderm microtubule-associated protein-like 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
neuronal acetylcholine receptor subunit alpha-6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
neuronal acetylcholine receptor subunit alpha-6-like
neuronal acetylcholine receptor subunit alpha-6-like, transcript variant X3
neuronal acetylcholine receptor subunit alpha-6-like, transcript variant X1
neuronal acetylcholine receptor subunit alpha-6-like, transcript variant X2
enoyl-CoA hydratase EchA19-like; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01028436.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 400 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 109 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
SET and MYND domain-containing protein 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
SET and MYND domain-containing protein 4-like
mitochondrial 2-oxodicarboxylate carrier-like; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial 2-oxodicarboxylate carrier-like
poly(A)-specific ribonuclease PARN-like; Derived by automated computational analysis using gene prediction method: Gnomon.
poly(A)-specific ribonuclease PARN-like, transcript variant X2
poly(A)-specific ribonuclease PARN-like, transcript variant X1
poly(A)-specific ribonuclease PARN-like isoform X2
poly(A)-specific ribonuclease PARN-like isoform X1
uncharacterized LOC128688909; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688909, transcript variant X1
uncharacterized LOC128688909, transcript variant X2
uncharacterized protein LOC128688909 isoform X2
uncharacterized protein LOC128688909 isoform X1
long-chain-fatty-acid--CoA ligase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
long-chain-fatty-acid--CoA ligase 1-like, transcript variant X4
long-chain-fatty-acid--CoA ligase 1-like isoform X2
long-chain-fatty-acid--CoA ligase 1-like, transcript variant X7
long-chain-fatty-acid--CoA ligase 1-like, transcript variant X5
long-chain-fatty-acid--CoA ligase 1-like isoform X3
long-chain-fatty-acid--CoA ligase 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
long-chain-fatty-acid--CoA ligase 1-like, transcript variant X3
long-chain-fatty-acid--CoA ligase 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins
long-chain-fatty-acid--CoA ligase 1-like isoform X1
long-chain-fatty-acid--CoA ligase 1-like isoform X5
long-chain-fatty-acid--CoA ligase 1-like, transcript variant X6
long-chain-fatty-acid--CoA ligase 1-like isoform X4
protein phosphatase 1K, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1K, mitochondrial-like, transcript variant X3
protein phosphatase 1K, mitochondrial-like, transcript variant X1
protein phosphatase 1K, mitochondrial-like, transcript variant X2
protein phosphatase 1K, mitochondrial-like
UPF0746 protein DDB_G0281095-like; Derived by automated computational analysis using gene prediction method: Gnomon.
26S proteasome non-ATPase regulatory subunit 12-like; Derived by automated computational analysis using gene prediction method: Gnomon.
26S proteasome non-ATPase regulatory subunit 12-like
LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 12-like
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
uncharacterized LOC128688914; Derived by automated computational analysis using gene prediction method: Gnomon.
SCY1-like protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins
serine/threonine-protein kinase DCLK1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
serine/threonine-protein kinase DCLK1-like
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 24 Proteins
endoribonuclease LACTB2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
neuronal migration protein doublecortin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
neuronal migration protein doublecortin-like, transcript variant X4
neuronal migration protein doublecortin-like, transcript variant X2
neuronal migration protein doublecortin-like, transcript variant X1
neuronal migration protein doublecortin-like, transcript variant X3
neuronal migration protein doublecortin-like
tRNA pseudouridine synthase Pus10-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: tRNA pseudouridine synthase Pus10-like
uncharacterized LOC128688783; Derived by automated computational analysis using gene prediction method: Gnomon.
plexin-B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
uncharacterized protein DDB_G0271670-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized protein DDB_G0271670-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase-like
uncharacterized LOC128688927; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
uncharacterized LOC128688925; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688929; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02062400.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 218 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
uncharacterized LOC128688926; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688826; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688826, transcript variant X3
uncharacterized LOC128688826, transcript variant X2
uncharacterized LOC128688826, transcript variant X1
uncharacterized protein LOC128688826 isoform X2
uncharacterized protein LOC128688826 isoform X1
probable aminopeptidase NPEPL1; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: probable aminopeptidase NPEPL1
thioredoxin-related transmembrane protein 2 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
thioredoxin-related transmembrane protein 2 homolog
protein amalgam-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein amalgam-like, transcript variant X3
protein amalgam-like, transcript variant X2
protein amalgam-like, transcript variant X1
uncharacterized LOC128688828; Derived by automated computational analysis using gene prediction method: Gnomon.
limbic system-associated membrane protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
limbic system-associated membrane protein-like
putative neural-cadherin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
abasic site processing protein HMCES-like; Derived by automated computational analysis using gene prediction method: Gnomon.
abasic site processing protein HMCES-like, transcript variant X3
abasic site processing protein HMCES-like, transcript variant X1
abasic site processing protein HMCES-like, transcript variant X2
abasic site processing protein HMCES-like isoform X1
abasic site processing protein HMCES-like isoform X2
abasic site processing protein HMCES-like isoform X3
ras-related protein Rap-2c-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ras-related protein Rap-2c-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
ras-related protein Rap-2c-like, transcript variant X2
ras-related protein Rap-2c-like, transcript variant X1
alpha-2-macroglobulin receptor-associated protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha-2-macroglobulin receptor-associated protein-like
uncharacterized LOC128688938; Derived by automated computational analysis using gene prediction method: Gnomon.
myosin light chain kinase, smooth muscle-like; Derived by automated computational analysis using gene prediction method: Gnomon.
myosin light chain kinase, smooth muscle-like
titin homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACB02057504.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 362 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 362 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688940; Derived by automated computational analysis using gene prediction method: Gnomon.
titin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688944; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688944, transcript variant X1
uncharacterized LOC128688944, transcript variant X2
uncharacterized LOC128688945; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
uncharacterized LOC128688946; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
LOW QUALITY PROTEIN: uncharacterized protein LOC128688946
NPC intracellular cholesterol transporter 2 homolog a-like; Derived by automated computational analysis using gene prediction method: Gnomon.
NPC intracellular cholesterol transporter 2 homolog a-like
LOW QUALITY PROTEIN: NPC intracellular cholesterol transporter 2 homolog a-like
tetratricopeptide repeat protein 19 homolog, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tetratricopeptide repeat protein 19 homolog, mitochondrial-like
rhythmically expressed gene 2 protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
rhythmically expressed gene 2 protein-like, transcript variant X2
rhythmically expressed gene 2 protein-like, transcript variant X3
rhythmically expressed gene 2 protein-like, transcript variant X1
rhythmically expressed gene 2 protein-like, transcript variant X4
rhythmically expressed gene 2 protein-like isoform X1
rhythmically expressed gene 2 protein-like isoform X2
uncharacterized LOC128688829; Derived by automated computational analysis using gene prediction method: Gnomon.
protein O-mannosyl-transferase TMTC1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein O-mannosyl-transferase TMTC1-like
protein O-mannosyl-transferase TMTC2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein O-mannosyl-transferase TMTC2-like
irregular chiasm C-roughest protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
irregular chiasm C-roughest protein-like
LOW QUALITY PROTEIN: irregular chiasm C-roughest protein-like
5S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
uncharacterized LOC128688951; Derived by automated computational analysis using gene prediction method: Gnomon.
BTB/POZ domain-containing protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
BTB/POZ domain-containing protein 1-like, transcript variant X2
BTB/POZ domain-containing protein 1-like, transcript variant X5
BTB/POZ domain-containing protein 1-like, transcript variant X4
BTB/POZ domain-containing protein 1-like, transcript variant X1
BTB/POZ domain-containing protein 1-like, transcript variant X3
BTB/POZ domain-containing protein 1-like, transcript variant X6
uncharacterized protein LOC128688952 isoform X3
BTB/POZ domain-containing protein 1-like isoform X2
BTB/POZ domain-containing protein 1-like isoform X1
BTB/POZ domain-containing protein 1-like isoform X4
nephrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 2 Proteins
apical junction molecule-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
galactoside alpha-(1,2)-fucosyltransferase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
galactoside alpha-(1,2)-fucosyltransferase 1-like
protein white-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins
uncharacterized LOC128688797; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688799; Derived by automated computational analysis using gene prediction method: Gnomon.
adipolin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cytochrome P450 4c3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688801; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688955; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01016167.1
similar to RNA sequence, mRNA (same species):INSD:GADE01008868.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1271 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 273 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688957; Derived by automated computational analysis using gene prediction method: Gnomon.
origin recognition complex subunit 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
origin recognition complex subunit 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 8 Proteins
origin recognition complex subunit 1-like isoform X2
origin recognition complex subunit 1-like, transcript variant X1
origin recognition complex subunit 1-like isoform X1
uncharacterized LOC128688958; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
splicing factor, suppressor of white-apricot homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
splicing factor, suppressor of white-apricot homolog
similar to RNA sequence (same species):INSD:HACB02040739.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 559 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 25 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 370 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
aurora kinase A-B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like
uncharacterized LOC128688960; Derived by automated computational analysis using gene prediction method: Gnomon.
similar to RNA sequence (same species):INSD:HACK01016272.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 221 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 124 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
beta-hexosaminidase subunit alpha-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
beta-hexosaminidase subunit beta-like; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: beta-hexosaminidase subunit beta-like
uncharacterized LOC128688803; Derived by automated computational analysis using gene prediction method: Gnomon.
fibrinogen-like protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
fibrinogen-like protein 1, transcript variant X2
fibrinogen-like protein 1, transcript variant X1
fibrinogen-like protein 1, transcript variant X3
transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
glutamate receptor ionotropic, kainate 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate receptor ionotropic, kainate 2-like
uncharacterized LOC128688805; Derived by automated computational analysis using gene prediction method: Gnomon.
probable glutamate receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate receptor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688808; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate receptor ionotropic, delta-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate receptor ionotropic, delta-2-like
glutamate receptor ionotropic, delta-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate receptor ionotropic, delta-1-like
uncharacterized LOC128688814; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
LOW QUALITY PROTEIN: uncharacterized protein LOC128688814
uncharacterized LOC128688817; Derived by automated computational analysis using gene prediction method: Gnomon.
gastrula zinc finger protein XlCGF52.1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
gastrula zinc finger protein XlCGF52.1-like
glutamate receptor ionotropic, kainate 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate receptor ionotropic, kainate 3-like
UDP-glucosyltransferase 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
UDP-glucosyltransferase 2-like, transcript variant X1
UDP-glucosyltransferase 2-like, transcript variant X2
alpha-(1,6)-fucosyltransferase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688819; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688821; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688822; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128688832; Derived by automated computational analysis using gene prediction method: Gnomon.