Deefgea piscis strain D17 plasmid unnamed1, complete sequence.
type: Entry
definition: Deefgea piscis strain D17 plasmid unnamed1, complete sequence.
sequence version: NZ_CP054144.1
sequence date: 2022-11-06
sequence: sequence
division: CON
label: NZ_CP054144.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15014496
keyword: RefSeq
source: Deefgea piscis
organism: Deefgea piscis
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Deefgea.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP054144.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: NOV-2019\nAssembly Method :: HGAP v. 3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 280.15x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/06/2022 08:39:18\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,224\nCDSs (total) :: 3,115\nGenes (coding) :: 3,067\nCDSs (with protein) :: 3,067\nGenes (RNA) :: 109\nrRNAs :: 8, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 8, 8 (5S, 16S, 23S)\ntRNAs :: 81\nncRNAs :: 4\nPseudo Genes (total) :: 48\nCDSs (without protein) :: 48\nPseudo Genes (ambiguous residues) :: 0 of 48\nPseudo Genes (frameshifted) :: 10 of 48\nPseudo Genes (incomplete) :: 42 of 48\nPseudo Genes (internal stop) :: 5 of 48\nPseudo Genes (multiple problems) :: 8 of 48\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 42722
topology: circular
so has quality: SO_0000988
location: 1..42722
location: region:1-42722:1
RO_0002162: 2739061

NZ_CP054144
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15014496
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Deefgea sp. D17
author: Bae, J.-W.
author: Han, J.E.
journal: Unpublished

2
title: Direct Submission
author: Bae, J.-W.
author: Han, J.E.
journal: Submitted (28-MAY-2020) Department of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Kyungheedae-ro 26, Seoul 130-701, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42722:1
position: 42722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42722:1:source
so part of: sequence
organism: Deefgea piscis
mol type: genomic DNA
strain: D17
host: Odontobutis platycephala
type material: type strain of Deefgea piscis
plasmid: unnamed1
country: South Korea
collection date: 2019-04

2739061
type: Taxonomy
SIO_000068: taxonomy

HQN60_RS15645
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15645
old locus tag: HQN60_15645
pseudo: true
so part of: sequence
location: complement(join(42304..42722,1..129))
location: region:1-42722:-1
so has part: feature:1-129:-1:exon
so has part: feature:42304-42722:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42722:-1
position: 42722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-129:-1:exon

position:129:-1
position: 129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42304-42722:-1:exon

position:42304:-1
position: 42304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HQN60_RS15645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15645
old locus tag: HQN60_15645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009602860.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: HQN60_RS15645
subclass of: SO_0000673
so part of: HQN60_RS15645
location: complement(join(42304..42722,1..129))
location: region:1-42722:-1
so has part: feature:1-129:-1:exon
so has part: feature:42304-42722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42304-42722:-1:exon

HQN60_RS16265
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS16265
so part of: sequence
location: complement(304..486)
location: region:304-486:-1
so has part: feature:304-486:-1:exon
subclass of: SO_0000010

position:304:-1
position: 304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486:-1
position: 486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304-486:-1:exon

HQN60_RS16265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS16265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012354489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAQKPGTNTGNKGGIFQEVGPRGGAKPNFATVADHKPLPPTTQSGHGWVPVHTTPNSKR
SIO_010081: HQN60_RS16265
subclass of: SO_0000673
so part of: HQN60_RS16265
location: complement(304..486)
location: region:304-486:-1
so has part: feature:304-486:-1:exon

WP_254456726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304-486:-1:exon

HQN60_RS15650
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15650
old locus tag: HQN60_15650
so part of: sequence
location: complement(756..1979)
location: region:756-1979:-1
so has part: feature:756-1979:-1:exon
subclass of: SO_0000010

position:756:-1
position: 756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1979:-1
position: 1979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756-1979:-1:exon

HQN60_RS15650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15650
old locus tag: HQN60_15650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014236577.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ImmA/IrrE family metallo-endopeptidase
translation: MNSIKIIKNEQERARAVERLIYLMDIDHPTEDVSAQIELLALVIQDYEQKVSPLAPVDPIDAILFRIEQMGMKRQELIPYIGSQSKVSEVLARTRPLTLAMMRRLHKGLGIPAEVLLGSDNPEIDLSNNPTLDYSQFPLVEMNARGYFGERLIASARELKDRAEELVSGFLRGGAGDKNTLAFLRAPQSQSGTRNMNDYALAAWMERVKQKAIHEKIDVPYQPGVVTDLLLREVVKLSSFDTGPKLAKEHLARYGIVLVVEEHFQKTYLDGVAMLLNDRAIIGMTLRHDRLDNFWFVLLHELAHIQKHLNPDNPLITDDLDDKVQQSQAIEQEADQIAQESLITSFAWLQSKVRTSYLQQDAHQLARELGISISIVAGRVRRETGNWRLLHNCLGKGVVKLMFERME
SIO_010081: HQN60_RS15650
subclass of: SO_0000673
so part of: HQN60_RS15650
location: complement(756..1979)
location: region:756-1979:-1
so has part: feature:756-1979:-1:exon

WP_173534748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:756-1979:-1:exon

HQN60_RS15655
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15655
old locus tag: HQN60_15655
so part of: sequence
location: complement(1993..2280)
location: region:1993-2280:-1
so has part: feature:1993-2280:-1:exon
subclass of: SO_0000010

position:1993:-1
position: 1993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2280:-1
position: 2280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1993-2280:-1:exon

HQN60_RS15655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15655
old locus tag: HQN60_15655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019272198.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HigB family toxin
translation: MQLVNVVALDHFKDLHADARTALDVWRKEVEKANWKTPQDIKNHYRSADFLPKDRVIFNIRGNNYRLIVVVKYQFGMVVVDWVGTHAEYDKKRFV
SIO_010081: HQN60_RS15655
subclass of: SO_0000673
so part of: HQN60_RS15655
location: complement(1993..2280)
location: region:1993-2280:-1
so has part: feature:1993-2280:-1:exon

WP_173534749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1993-2280:-1:exon

HQN60_RS15660
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15660
old locus tag: HQN60_15660
so part of: sequence
location: 2571..4118
location: region:2571-4118:1
so has part: feature:2571-4118:1:exon
subclass of: SO_0000010

position:2571:1
position: 2571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4118:1
position: 4118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571-4118:1:exon

HQN60_RS15660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15660
old locus tag: HQN60_15660
inference: COORDINATES: protein motif:HMM:NF014691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MGRPQLSEQDKLARALKELHAVTGSDKGVVKGNQLKPASRKLLVDKAFLREVIKGWYFVSDPHADDGDTTPFFANFWEYLAKYLAERFGTEYCLSPADSLKLHTQCNVIPQQVTIHLGTNQTHNQELAHGYSLAMYPSGALPTTDQVTFVQGLRCLKPEICLVKLPPNGYKSWAEETQLLLATLNDPDAVAALYTTNASGVGRIAGAMRAMGRVAFADNIVRQLTGLNYKLVETNPYEHSVAYQLGSPNASPLYARVKLQWEKQRARVLQCKPADCITQLPFEDYLARIEAIKVQDAYHSLSIERYRVTPELIAKVERGDWSPDLNPTDRQQVDAMAARGYLDAFNGVKASISDLLATQANAGQLFTDTHQRWYQQLFKPSVDAGILQTSDLIGYRRSMVFLRGSLHSPPHYDHVRDGMAALKECLLAEEDAFVRAVLGHWLFGFIHPYMDGNGRLARFTMNLMLASGQYPWTVIKVDHRQEYMAALEAASVEQDITPFAKFIARCVSDSYSAFT
SIO_010081: HQN60_RS15660
subclass of: SO_0000673
so part of: HQN60_RS15660
location: 2571..4118
location: region:2571-4118:1
so has part: feature:2571-4118:1:exon

WP_173534750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2571-4118:1:exon

HQN60_RS15665
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15665
old locus tag: HQN60_15665
so part of: sequence
location: complement(4267..5340)
location: region:4267-5340:-1
so has part: feature:4267-5340:-1:exon
subclass of: SO_0000010

position:4267:-1
position: 4267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5340:-1
position: 5340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4267-5340:-1:exon

HQN60_RS15665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15665
old locus tag: HQN60_15665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018314468.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent alcohol dehydrogenase
translation: MNKIMRRWELPKFGRENLRLVEVPVPTPDAHEVLVCVSAVSLNYRDKLIIQNGMGLTPDMPFTPGSDMAGTVVATGAGCHRFAVGDAVLGAFSADWLDGAAPGTGRDLMPALGGPPLPGMLSEYVVLPEAWLVHAPSSLDAVQASTLPCAAVTAWQALIELGHLRAGQSVVVQGTGGVSLFAVQFAAAHGATVIVTSGDDDKLVRVKAIGASHGINRHSTPEWAQAVVALTGGRGADHILEMVGGDNLERSLDALIHQGRISVIGVFGGMGATLPVGTMLKKRATVQGIGVGPRRVLEDVIRAIDRTGIKPVIAAQHPFSDLQTGLDELDRGPFGKVVIRGVEHSEDNKLRMNSENE
SIO_010081: HQN60_RS15665
subclass of: SO_0000673
so part of: HQN60_RS15665
location: complement(4267..5340)
location: region:4267-5340:-1
so has part: feature:4267-5340:-1:exon

WP_173534790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4267-5340:-1:exon

HQN60_RS15670
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15670
old locus tag: HQN60_15670
so part of: sequence
location: 5457..6362
location: region:5457-6362:1
so has part: feature:5457-6362:1:exon
subclass of: SO_0000010

position:5457:1
position: 5457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6362:1
position: 6362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5457-6362:1:exon

HQN60_RS15670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15670
old locus tag: HQN60_15670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017894002.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MSDQLSGIAAFVQAAEAASFAVAAEQMGLSRSAVGKAVARLEERLGVQLFHRTTRSLNLTDEGALFYERCSGALAEINAAEQSFDAGQHEPVGRIRISVPVLLGRHCIAPILVNLARVHSQLEIDVAFTDRPVDLLDDGFDLVVRTGSLANESDLKARRLGSQAMVLCAAPSYLQSHGTPLRLEDITSHDTLAYGKGNSVVPWRFTDRGRQHEIKTTGRIRFDDLEAIADAATGGVGLAWLPSWLIANQLNSGLLIEVLPELRGPGFDIFAVWPLGRYLPMRIRVVIDELVTKIPSMLEVK
SIO_010081: HQN60_RS15670
subclass of: SO_0000673
so part of: HQN60_RS15670
location: 5457..6362
location: region:5457-6362:1
so has part: feature:5457-6362:1:exon

WP_173534751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5457-6362:1:exon

HQN60_RS15675
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15675
old locus tag: HQN60_15675
so part of: sequence
location: complement(6535..7062)
location: region:6535-7062:-1
so has part: feature:6535-7062:-1:exon
subclass of: SO_0000010

position:6535:-1
position: 6535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7062:-1
position: 7062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6535-7062:-1:exon

HQN60_RS15675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15675
old locus tag: HQN60_15675
inference: COORDINATES: protein motif:HMM:NF037735.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD domain-containing protein
translation: MIIFLDFDGVLHPSTVYLRGGKPILDGDGELFMWAPLLINALSEFSACKIVLSTNWVRRLGFESTCDLLPVGLRERVIGSTWHSVMETPRYNDGLTLSYWNDATRFQQIKHWAQFNKLHLNEWIAVDDDASGWPDSDSDNLVLLNGRAGLSDATKLGMLKSKLSSYQVSSVDFLS
SIO_010081: HQN60_RS15675
subclass of: SO_0000673
so part of: HQN60_RS15675
location: complement(6535..7062)
location: region:6535-7062:-1
so has part: feature:6535-7062:-1:exon

WP_173534752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6535-7062:-1:exon

HQN60_RS15680
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15680
old locus tag: HQN60_15680
so part of: sequence
location: complement(7059..7271)
location: region:7059-7271:-1
so has part: feature:7059-7271:-1:exon
subclass of: SO_0000010

position:7059:-1
position: 7059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7271:-1
position: 7271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7059-7271:-1:exon

HQN60_RS15680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15680
old locus tag: HQN60_15680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLEARIAWTFDENTCLFERASFGAVADSFAAAWRDASGDFWAQIDEKKRRWQEGDSLFISGVCFYLDDLQ
SIO_010081: HQN60_RS15680
subclass of: SO_0000673
so part of: HQN60_RS15680
location: complement(7059..7271)
location: region:7059-7271:-1
so has part: feature:7059-7271:-1:exon

WP_173534753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7059-7271:-1:exon

HQN60_RS15685
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15685
old locus tag: HQN60_15685
so part of: sequence
location: complement(7285..7704)
location: region:7285-7704:-1
so has part: feature:7285-7704:-1:exon
subclass of: SO_0000010

position:7285:-1
position: 7285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7704:-1
position: 7704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285-7704:-1:exon

HQN60_RS15685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15685
old locus tag: HQN60_15685
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDFSFDWPPTINQYYIAADWVIKNSNCSVGREGIAEAFAVICTLSSSAGSPVLITNIFSDYSLEVLFIPSLSNMALPNLPGLELSSSAIDAIGKAFSLNFLKSGNDTFLLEEHGMSLYIFMKHVRHTILQATGVELIN
SIO_010081: HQN60_RS15685
subclass of: SO_0000673
so part of: HQN60_RS15685
location: complement(7285..7704)
location: region:7285-7704:-1
so has part: feature:7285-7704:-1:exon

WP_173534754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7285-7704:-1:exon

HQN60_RS15690
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15690
old locus tag: HQN60_15690
so part of: sequence
location: complement(7761..8090)
location: region:7761-8090:-1
so has part: feature:7761-8090:-1:exon
subclass of: SO_0000010

position:7761:-1
position: 7761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8090:-1
position: 8090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7761-8090:-1:exon

HQN60_RS15690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15690
old locus tag: HQN60_15690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDQNSIQNSLLNCDNKKSGKRGRPKKYLTPEAQQEALRKQVAEANRKLRKNQKDRLQLSNVMINNVIIELVDVADKLANFESCGSEVRIEDIRIKVLTAINNLRILEK
SIO_010081: HQN60_RS15690
subclass of: SO_0000673
so part of: HQN60_RS15690
location: complement(7761..8090)
location: region:7761-8090:-1
so has part: feature:7761-8090:-1:exon

WP_173534755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7761-8090:-1:exon

HQN60_RS15695
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15695
old locus tag: HQN60_15695
so part of: sequence
location: 8380..10044
location: region:8380-10044:1
so has part: feature:8380-10044:1:exon
subclass of: SO_0000010

position:8380:1
position: 8380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10044:1
position: 10044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8380-10044:1:exon

HQN60_RS15695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15695
old locus tag: HQN60_15695
inference: COORDINATES: protein motif:HMM:NF013258.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid recombination protein
translation: MKEQRFQFAHVNLYSRSLSTLTTNKGGARWTIADIAAEARRDADNSHHVINKKEPVIIAGCTLFELENKVNEKLEAVRIVSKKGVAKKIRSDAKVLAAAIYSWPEAIENLEKYEPGGLNPKALPERINNWIEDVIKFQEKEFNSKILCAAVHLDEGFPHLHVYSLCLDNDGKMLHPGFRDKEQTIKEVFQISGDKNIATKSGNRAYIAAMKLWQDRFYEEVSQFHGMDRLGPRRQRTPTHLYRSLDAKIVRQKISNSRRKARDQELNAINEAALILGKVKDASRIVELAEKLTTGNIKLPEIQPSSPLDSKKVYAIGLSAAGTGKKILGLGQELFTQEQMRTAIKASANEANLQARSIEQKRFEPLINTAKEISTLPGEVDELIKQKIELTKEITELNKIRQVTETLANENRWEISAQTGKTLGEVDTEVSSALTKNDEFKIERHKRILNLLQRERKPLIGRIVQGAIGRLAQLANMAIRFSNGDWNQVNWNSVEEDAARDALNNDNQPIEAIIQQFEHNAPTWADPQIAKQKMDEYRHSADAWLNSNDSTFQP
SIO_010081: HQN60_RS15695
subclass of: SO_0000673
so part of: HQN60_RS15695
location: 8380..10044
location: region:8380-10044:1
so has part: feature:8380-10044:1:exon

WP_173534756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8380-10044:1:exon

HQN60_RS15700
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15700
old locus tag: HQN60_15700
pseudo: true
so part of: sequence
location: complement(10048..11325)
location: region:10048-11325:-1
so has part: feature:10048-11325:-1:exon
subclass of: SO_0000010

position:10048:-1
position: 10048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11325:-1
position: 11325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10048-11325:-1:exon

HQN60_RS15700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15700
old locus tag: HQN60_15700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013966328.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Y-family DNA polymerase
SIO_010081: HQN60_RS15700
subclass of: SO_0000673
so part of: HQN60_RS15700
location: complement(10048..11325)
location: region:10048-11325:-1
so has part: feature:10048-11325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10048-11325:-1:exon

HQN60_RS15705
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
gene: umuD
locus tag: HQN60_RS15705
old locus tag: HQN60_15705
so part of: sequence
location: complement(11325..11774)
location: region:11325-11774:-1
so has part: feature:11325-11774:-1:exon
subclass of: SO_0000010

position:11774:-1
position: 11774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11325-11774:-1:exon

HQN60_RS15705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
gene: umuD
locus tag: HQN60_RS15705
old locus tag: HQN60_15705
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:NF007621.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V autoproteolytic subunit
translation: MSAELLHDQHWRVFRCPPDQPTNRIAYCATPIPAGFPSPAEGYLDDYLSLDEHMIQDKASTLLLRAKGDSMIEEHICDGDLLIVDRGRQAKSGDIVVATLDGEFTLKRLLICGKNLILQPANPDYQPITVSPEQEFEVFGVVSGIARQF
SIO_010081: HQN60_RS15705
subclass of: SO_0000673
so part of: HQN60_RS15705
location: complement(11325..11774)
location: region:11325-11774:-1
so has part: feature:11325-11774:-1:exon

WP_173534757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11325-11774:-1:exon

HQN60_RS15710
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15710
old locus tag: HQN60_15710
so part of: sequence
location: 11850..12542
location: region:11850-12542:1
so has part: feature:11850-12542:1:exon
subclass of: SO_0000010

position:11850:1
position: 11850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12542:1
position: 12542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11850-12542:1:exon

HQN60_RS15710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15710
old locus tag: HQN60_15710
inference: COORDINATES: protein motif:HMM:NF014626.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SOS response-associated peptidase
translation: MCGRFALYADTALIRERFQLRDLPTGFAPHYNFAPSLPLLTIRPDAQGGRVARMRRWGLVPHWAADAKIGNKLSNARAETAWQKPSFRDAFHIGRCIISASGYYEWQTREEGGKLVKQPYYLYAQSGETLAMAGLVSLWIAPDGSKLPTCCVLTTTPNNMTAEIHERMPVLLTSPAAEEIWLNDDSPLGAVRELCAPCNENYLLTHMVSRRVNAARENDSGLMAIYADPQ
SIO_010081: HQN60_RS15710
subclass of: SO_0000673
so part of: HQN60_RS15710
location: 11850..12542
location: region:11850-12542:1
so has part: feature:11850-12542:1:exon

WP_173534758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11850-12542:1:exon

HQN60_RS15715
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15715
old locus tag: HQN60_15715
so part of: sequence
location: complement(12548..12946)
location: region:12548-12946:-1
so has part: feature:12548-12946:-1:exon
subclass of: SO_0000010

position:12548:-1
position: 12548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12946:-1
position: 12946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12548-12946:-1:exon

HQN60_RS15715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15715
old locus tag: HQN60_15715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNYYGSVERAMAERHSGRLQGFNEGIATGILQGRTAGYNQGIDEGYERGLNNGYNQGYQAGYDACVDAANAEIQKCMAYIRQHVADKKSLAEQASAQHELILQLRSALSSLDAENQQLRQQLGRVELARLR
SIO_010081: HQN60_RS15715
subclass of: SO_0000673
so part of: HQN60_RS15715
location: complement(12548..12946)
location: region:12548-12946:-1
so has part: feature:12548-12946:-1:exon

WP_173534759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12548-12946:-1:exon

HQN60_RS15720
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15720
old locus tag: HQN60_15720
so part of: sequence
location: 13085..13345
location: region:13085-13345:1
so has part: feature:13085-13345:1:exon
subclass of: SO_0000010

position:13085:1
position: 13085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13345:1
position: 13345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13085-13345:1:exon

HQN60_RS15720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15720
old locus tag: HQN60_15720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011288030.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MTQDYEQLKKRLALNIKIARKTAKMSQEALALNADVDRTYVSQLERGIANPSLLILCRLADILQVDILDLLARSTDMASHEGDSSI
SIO_010081: HQN60_RS15720
subclass of: SO_0000673
so part of: HQN60_RS15720
location: 13085..13345
location: region:13085-13345:1
so has part: feature:13085-13345:1:exon

WP_173534760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13085-13345:1:exon

HQN60_RS15725
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15725
old locus tag: HQN60_15725
so part of: sequence
location: 13395..13832
location: region:13395-13832:1
so has part: feature:13395-13832:1:exon
subclass of: SO_0000010

position:13395:1
position: 13395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13832:1
position: 13832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13395-13832:1:exon

HQN60_RS15725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15725
old locus tag: HQN60_15725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHRTVVIFLAITIGNVAFAASSDSITSVQNAFECKQRLADTPAIRSALGNKEKSELRETGLSGNYTLSQPIKVFGYELHNVHISEDADTGTSYSITLPKSELKKLAQTAKLKANDGSYYRAFKGGHIEAGNSAPGSIALSCIWAN
SIO_010081: HQN60_RS15725
subclass of: SO_0000673
so part of: HQN60_RS15725
location: 13395..13832
location: region:13395-13832:1
so has part: feature:13395-13832:1:exon

WP_173534761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13395-13832:1:exon

HQN60_RS15730
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15730
old locus tag: HQN60_15730
so part of: sequence
location: 13836..14663
location: region:13836-14663:1
so has part: feature:13836-14663:1:exon
subclass of: SO_0000010

position:13836:1
position: 13836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14663:1
position: 14663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13836-14663:1:exon

HQN60_RS15730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15730
old locus tag: HQN60_15730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRISLFITSISATALLGCTTTPMQDGSTKVTISPAQLIKLPQAAADQPIQRNNPNFYSNGTALVLAEHRQALNATPRGFLALGNACGYAILHATMSGQELRADEVDECARHYQSLASNTKQQEIQSSPELAKLSWGGADREQIKTAFSHFANTVIRDLKGKNQFFVRTKVGIRWFDQQAKAYVVDIAYGAHSVSRGNNIVLKYLPDPFLLSGTADDYRNVEAVKNRYGYFICNLYMTGSAKTKKSGSNIDRLLVMDIDRFDCLDDSGKIKLTGSK
SIO_010081: HQN60_RS15730
subclass of: SO_0000673
so part of: HQN60_RS15730
location: 13836..14663
location: region:13836-14663:1
so has part: feature:13836-14663:1:exon

WP_173534762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13836-14663:1:exon

HQN60_RS15735
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15735
old locus tag: HQN60_15735
so part of: sequence
location: 14718..15029
location: region:14718-15029:1
so has part: feature:14718-15029:1:exon
subclass of: SO_0000010

position:14718:1
position: 14718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15029:1
position: 15029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14718-15029:1:exon

HQN60_RS15735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15735
old locus tag: HQN60_15735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDKNMNQVLNEMEKTAQVIEAFVAAAVPDQLSHDGFLVAQYFPQFIRRHIADIQKLQLTEHCYPALPENTDDPVRADVDRIHLQNQNVSAWLNEQITHTGKR
SIO_010081: HQN60_RS15735
subclass of: SO_0000673
so part of: HQN60_RS15735
location: 14718..15029
location: region:14718-15029:1
so has part: feature:14718-15029:1:exon

WP_173534763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14718-15029:1:exon

HQN60_RS15740
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15740
old locus tag: HQN60_15740
so part of: sequence
location: complement(15166..16146)
location: region:15166-16146:-1
so has part: feature:15166-16146:-1:exon
subclass of: SO_0000010

position:15166:-1
position: 15166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16146:-1
position: 16146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15166-16146:-1:exon

HQN60_RS15740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15740
old locus tag: HQN60_15740
inference: COORDINATES: protein motif:HMM:NF023168.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MHKKKNKNIILILLFFLWSFGMDIDQAIRERVLVAAKALYEESGRADFPTVAAVRAKAGVDMNAASVVMKEWRRLQTATAAPVEVVVPPAVLQSAQVLVANLWKDAQDLANESLLAAQSGWEAERVEAETLRSQLSEAFEGVRAEFEALQLQLVDCEKALGDAQVLIQNEQAINNELQSEKLALQSACNTEIARNQELELRVADLKAELDRAHADKSAADLERQSAISERDELKAQAVELNKRLSLSEQSAHTASALLSQAESRILAAENREVALQTELKEERAAFEKVREEAARTAELAAQRVGELEALRGFLARFTPPAEAVSG
SIO_010081: HQN60_RS15740
subclass of: SO_0000673
so part of: HQN60_RS15740
location: complement(15166..16146)
location: region:15166-16146:-1
so has part: feature:15166-16146:-1:exon

WP_173534764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15166-16146:-1:exon

HQN60_RS15745
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15745
old locus tag: HQN60_15745
so part of: sequence
location: complement(16508..16750)
location: region:16508-16750:-1
so has part: feature:16508-16750:-1:exon
subclass of: SO_0000010

position:16508:-1
position: 16508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16750:-1
position: 16750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16508-16750:-1:exon

HQN60_RS15745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15745
old locus tag: HQN60_15745
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: cryptic plasmid protein A
translation: MDDLVILANDRDRRVLAWLRETQGDSVILNALSQLSGARKPYLSNVLKILNLQAPDNLLLTDRDVARAHLAHLKAMLPKS
SIO_010081: HQN60_RS15745
subclass of: SO_0000673
so part of: HQN60_RS15745
location: complement(16508..16750)
location: region:16508-16750:-1
so has part: feature:16508-16750:-1:exon

WP_173534765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16508-16750:-1:exon

HQN60_RS15750
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15750
old locus tag: HQN60_15750
so part of: sequence
location: complement(16907..18127)
location: region:16907-18127:-1
so has part: feature:16907-18127:-1:exon
subclass of: SO_0000010

position:16907:-1
position: 16907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18127:-1
position: 18127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16907-18127:-1:exon

HQN60_RS15750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15750
old locus tag: HQN60_15750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005931722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MAQPLKSESSASVIENELLQRFQQEGTALHRLLEEAAYLARCSDNKTAALIRPRDYAIKYPYMQINRAGFVSWLIFDLDHDNAMIWQDKGLPEPNLIVQNRQSGHAHLYYAIAPVCTSERARSKPIQYMKAIYSAWSRELNADPEYHSGPVAKTPGHQWWRTSELHSHVYELSELADSVELASASPWAKSPNLDAVSHSRNCIMFEKLRFYAYSIVNRQKEEGSFLSFTRLLEAFVHNHNAFRNLGFSADLSLSDLRATVKSVARWTWDKYTGSGRCHRGVMQLDQSLSLPEKQALAAERTHSARKQKTEGRIRAACRALQQQGKALLHEAIAQAASLSRQTVAKYKHVLEEVKKPLSVVTLRATNPAPLDVKYAAHQVSAPQGGTLGVGDAVGFDADFFLALPEI
SIO_010081: HQN60_RS15750
subclass of: SO_0000673
so part of: HQN60_RS15750
location: complement(16907..18127)
location: region:16907-18127:-1
so has part: feature:16907-18127:-1:exon

WP_173534766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16907-18127:-1:exon

HQN60_RS15755
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15755
old locus tag: HQN60_15755
so part of: sequence
location: complement(18325..18675)
location: region:18325-18675:-1
so has part: feature:18325-18675:-1:exon
subclass of: SO_0000010

position:18325:-1
position: 18325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18675:-1
position: 18675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18325-18675:-1:exon

HQN60_RS15755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15755
old locus tag: HQN60_15755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ParC family partition-associated protein
translation: MFQRELLLMHNLHDAKNWGINVADLFVNIVEPRAAKQFAGFGGITAASVRAEPEGLVVVFRVNGAESVLGAARGGMRYFKSIDGAASAIKQLGVTEFSMNLEPWVPKNATRKIDEE
SIO_010081: HQN60_RS15755
subclass of: SO_0000673
so part of: HQN60_RS15755
location: complement(18325..18675)
location: region:18325-18675:-1
so has part: feature:18325-18675:-1:exon

WP_173534767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18325-18675:-1:exon

HQN60_RS15760
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15760
old locus tag: HQN60_15760
so part of: sequence
location: complement(18807..19100)
location: region:18807-19100:-1
so has part: feature:18807-19100:-1:exon
subclass of: SO_0000010

position:18807:-1
position: 18807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19100:-1
position: 19100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18807-19100:-1:exon

HQN60_RS15760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15760
old locus tag: HQN60_15760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798552.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRGKPDLSKLGSPKKDVNAFLDGAGADQAEKPATGDSKPDAAAVTTQPKEQKAFRLPVDLIVALRREAFERTEKTGTRVTETELVEDALRTYLKLSS
SIO_010081: HQN60_RS15760
subclass of: SO_0000673
so part of: HQN60_RS15760
location: complement(18807..19100)
location: region:18807-19100:-1
so has part: feature:18807-19100:-1:exon

WP_173534768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18807-19100:-1:exon

HQN60_RS15765
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15765
old locus tag: HQN60_15765
so part of: sequence
location: complement(19097..19723)
location: region:19097-19723:-1
so has part: feature:19097-19723:-1:exon
subclass of: SO_0000010

position:19097:-1
position: 19097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19723:-1
position: 19723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19097-19723:-1:exon

HQN60_RS15765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15765
old locus tag: HQN60_15765
inference: COORDINATES: protein motif:HMM:NF018691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MRFAVVNTKGGVGKTTTAVHLAVMLARQGKTLLIDGDPQASAASWAAWRRETDFNPSPTTTCLTGKAILAEGKQLAAGFEHVVVDAGGRDSVGLRSALLLAQRAIIPIGASNLDAAAMTDLLEVVEMARDYNPELDVRVLLTRVDPRTKDAAEMLEFLAEHSLRVLPTKVCERVAFRRAIGEGAVVLELGRDQSAIAEMEAFFREVLE
SIO_010081: HQN60_RS15765
subclass of: SO_0000673
so part of: HQN60_RS15765
location: complement(19097..19723)
location: region:19097-19723:-1
so has part: feature:19097-19723:-1:exon

WP_173534769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19097-19723:-1:exon

HQN60_RS15770
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15770
old locus tag: HQN60_15770
so part of: sequence
location: 20007..20477
location: region:20007-20477:1
so has part: feature:20007-20477:1:exon
subclass of: SO_0000010

position:20007:1
position: 20007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20477:1
position: 20477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20007-20477:1:exon

HQN60_RS15770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15770
old locus tag: HQN60_15770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHLFQILVLSVAASTAIAAPSKLVPISAEQQSAIQTQFEVKTKDKNLAEAVGQAKENIGKFLEVESCIANFSGSQLNLYAAPGKQFADMNYWPVMASARKHVRDTCVTVTKIQGWKLSAKNSLVFEVVYTADDSGEIVKKHYEVQKQGDDSWLFI
SIO_010081: HQN60_RS15770
subclass of: SO_0000673
so part of: HQN60_RS15770
location: 20007..20477
location: region:20007-20477:1
so has part: feature:20007-20477:1:exon

WP_173534770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20007-20477:1:exon

HQN60_RS15775
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15775
old locus tag: HQN60_15775
so part of: sequence
location: 20555..21322
location: region:20555-21322:1
so has part: feature:20555-21322:1:exon
subclass of: SO_0000010

position:20555:1
position: 20555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21322:1
position: 21322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20555-21322:1:exon

HQN60_RS15775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15775
old locus tag: HQN60_15775
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTEIIRILVPGDDQDTNAISMAFSYAEQIYELKKGEDCEVILFAPGKDSLKFTTLSSALGEKNAKTLHDGGSLALPSGIRMRAETIRTLKWLNKPSIVISVYSDQKMLDQIDSTKNVIGIIAVPYAPDALESWQQTWSPIVHGAATEQPTKKLLNDPLFEQALVSLTASINLSHTVLHPRDKEHTEQTLRILRANDHKEETENIRSWAIKHGWHPKAADELEKLAQRILSMASKPKMSDPALAQRRYDYWRSKI
SIO_010081: HQN60_RS15775
subclass of: SO_0000673
so part of: HQN60_RS15775
location: 20555..21322
location: region:20555-21322:1
so has part: feature:20555-21322:1:exon

WP_173534771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20555-21322:1:exon

HQN60_RS15780
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15780
old locus tag: HQN60_15780
so part of: sequence
location: complement(21391..22449)
location: region:21391-22449:-1
so has part: feature:21391-22449:-1:exon
subclass of: SO_0000010

position:21391:-1
position: 21391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22449:-1
position: 22449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21391-22449:-1:exon

HQN60_RS15780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15780
old locus tag: HQN60_15780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKNDSKQDDQNKLISFRVDDVFMKRFEALKERFSASGKKTSTSDLARSLLESASVQNAEFGDLLANVASSVREIIRLYKSNSPLRRSQWELVSYLINDAYQKNARQAVNGQYYKAALMAFSAWRKLSGKDSNDRYFKSNLRQTGEKDLLKSIDAIVQNMPQLISNSEAEFGARNFNVAMRDEIADINVLELNDVLLPYLSDLLPVVIRAVYQRTKTPLYEKERNFMASPIRPIKSDRYWLNILVSGDSFTAGLELSTHRSIHPINSFLQFQELVQIFNEVSEDNLSASSSCYWLSAPIPNCMESYHWRYYGHQMTLNPDEFVELKQIFATALQQGDVKQAVRGMIDIYGDI
SIO_010081: HQN60_RS15780
subclass of: SO_0000673
so part of: HQN60_RS15780
location: complement(21391..22449)
location: region:21391-22449:-1
so has part: feature:21391-22449:-1:exon

WP_173534772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21391-22449:-1:exon

HQN60_RS15785
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15785
old locus tag: HQN60_15785
so part of: sequence
location: complement(22464..22985)
location: region:22464-22985:-1
so has part: feature:22464-22985:-1:exon
subclass of: SO_0000010

position:22464:-1
position: 22464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22985:-1
position: 22985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22464-22985:-1:exon

HQN60_RS15785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15785
old locus tag: HQN60_15785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHIFYPGNSLQPCLAQYAIALSKVKELATAQILFVELSTARNIGATFCSFGDVPDFLVNKVIADELSGCRLDFIECYYAGLPDEGGRRPVSQWILQPDTFDLAMRGGSCDAVIYASFLDKIKARFLGGVTPIAVHANSYQLRGGVCRVKIIDVHHGLPEDQRIKILNKFDVI
SIO_010081: HQN60_RS15785
subclass of: SO_0000673
so part of: HQN60_RS15785
location: complement(22464..22985)
location: region:22464-22985:-1
so has part: feature:22464-22985:-1:exon

WP_173534773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22464-22985:-1:exon

HQN60_RS15790
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15790
old locus tag: HQN60_15790
pseudo: true
so part of: sequence
location: complement(23295..>23408)
location: region:23295-23408:-1
so has part: feature:23295-23408:-1:exon
subclass of: SO_0000010

position:23295:-1
position: 23295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23408:-1
position: 23408
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23295-23408:-1:exon

HQN60_RS15790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15790
old locus tag: HQN60_15790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611949.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: HQN60_RS15790
subclass of: SO_0000673
so part of: HQN60_RS15790
location: complement(23295..>23408)
location: region:23295-23408:-1
so has part: feature:23295-23408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23295-23408:-1:exon

HQN60_RS15795
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15795
old locus tag: HQN60_15795
so part of: sequence
location: complement(23444..24970)
location: region:23444-24970:-1
so has part: feature:23444-24970:-1:exon
subclass of: SO_0000010

position:23444:-1
position: 23444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24970:-1
position: 24970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23444-24970:-1:exon

HQN60_RS15795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15795
old locus tag: HQN60_15795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MYSYEDRLRAVQLYIQLGKRVGPTLRQLGYPTKNALKGWYREYVQMLDLPAGYARRKPRYSQTQKQIAVEHYRAHGQCIASTISALGYPCRSVLSDWIGEVFPESRKRIIGSFKQISYPDSIKQAGVMALCVRNGSAQAIAEKFGVCRVTLYNWKNQLLGHEAPVSMKVNDNFSPDQVKLQLEILQNDLQQLQLERDLLKIANEVLEQSVAVDLQKLGNREKTLLVEAQKERYSLSELLAQLRLPRSSYFYHKTCLKAGDKYLAVRQTICDIFEQNYRCYGYRRMKAALAEQDIILSEKVVQRLMKQEGLLVSKPKRRRYGSYLGEISPAPDNLINRDFQAAAPNEKWLTDITEFHIPAGKVYLSPIIDCFDGLVISWSIGTHPNADLVNTMLDTAIETVAQREERPIIHSDRGAHYRWPGWLTRISNANLVRSMSRKGCSPDNAACEGFFGRLKTELFYYRDWAGVSIEQFTQMVDTYIRWYNEKRIKVSLGAVSPIEYRKRLGLIT
SIO_010081: HQN60_RS15795
subclass of: SO_0000673
so part of: HQN60_RS15795
location: complement(23444..24970)
location: region:23444-24970:-1
so has part: feature:23444-24970:-1:exon

WP_173534774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23444-24970:-1:exon

HQN60_RS15800
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15800
old locus tag: HQN60_15800
so part of: sequence
location: 25179..25826
location: region:25179-25826:1
so has part: feature:25179-25826:1:exon
subclass of: SO_0000010

position:25179:1
position: 25179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25826:1
position: 25826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25179-25826:1:exon

HQN60_RS15800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15800
old locus tag: HQN60_15800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNCDFKTTLIAYLSSKADSGSALLVHHASADRAPLTDIIRHRNKTYAEHGLNYLIAGLGDLDGTPDPIDLRSEHVWVVEDGLIVASLRMTAHPFEIGDVIQLLPALNKVGQGHIEFGRLAISSRNPIAFEQLMATACLYGISHRYTGIVGMCRAVQKRLFERFGLTTVTNEPFLVPARNNGTYWVMETDWNRLSIALSRKYSIKNPQSEALHIA
SIO_010081: HQN60_RS15800
subclass of: SO_0000673
so part of: HQN60_RS15800
location: 25179..25826
location: region:25179-25826:1
so has part: feature:25179-25826:1:exon

WP_173534775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25179-25826:1:exon

HQN60_RS15805
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15805
old locus tag: HQN60_15805
so part of: sequence
location: 25848..26588
location: region:25848-26588:1
so has part: feature:25848-26588:1:exon
subclass of: SO_0000010

position:25848:1
position: 25848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26588:1
position: 26588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25848-26588:1:exon

HQN60_RS15805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15805
old locus tag: HQN60_15805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007954095.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-containing redox enzyme family protein
translation: MTTENQLNFDVFFAQLDSKLDHLWSEIIKSSPLAKSVLSGEATKELYAIYMIETYHYTSHNARNQALVGTRQDIESLPYLKFCLEHAADEIGHERMALHDVRSIGLLNIQDKPPRPLFATETLISYLYWISLTGNPLQRLGYSYWAESCYHYIDPLIQGIRQTLNLQPAQLTFFIAHSDIDADHFEHVKAIIRRSCKTESDLEAIEYALETTLKLTGQMLDAVYDEYQKLLSGTSNRYSFLLQAVS
SIO_010081: HQN60_RS15805
subclass of: SO_0000673
so part of: HQN60_RS15805
location: 25848..26588
location: region:25848-26588:1
so has part: feature:25848-26588:1:exon

WP_173534776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25848-26588:1:exon

HQN60_RS15810
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15810
old locus tag: HQN60_15810
so part of: sequence
location: 26591..27673
location: region:26591-27673:1
so has part: feature:26591-27673:1:exon
subclass of: SO_0000010

position:26591:1
position: 26591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27673:1
position: 27673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26591-27673:1:exon

HQN60_RS15810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15810
old locus tag: HQN60_15810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012733506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3419 family protein
translation: MANYFKNLNYTLGDEDPTPELAMLPVSSAHVLAIADCGSRIVPLLAKKPSKLTCVDINREQLAVCELRIALLRDVSLTEYKQFLGYEGLMPPETRKAIFNQLSLNDGARNILRDMFENISWGSMLYCGKFEQMLRKLKAINSLFTGSAGRGIFDCTNLSEQQTYYRTSFPHWRWRCVLALLGNSTALNSLLYKGDFPKKNRPSSHFSIYNQIFDTLLGKRLARKSFFLQILFFGEIRYQDGLPLECSPDVFEAAKAGAKQCQISFSHNDVFVESQRHYDLDFVSLSDVPSFLSPDQENQFLTRLRLNLTPGGKVVVRAHLRQPWPEMEGFVDVSQKYQDSAESESTQLWSFHIYEHQLLA
SIO_010081: HQN60_RS15810
subclass of: SO_0000673
so part of: HQN60_RS15810
location: 26591..27673
location: region:26591-27673:1
so has part: feature:26591-27673:1:exon

WP_173534777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26591-27673:1:exon

HQN60_RS15815
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15815
old locus tag: HQN60_15815
so part of: sequence
location: 27721..28077
location: region:27721-28077:1
so has part: feature:27721-28077:1:exon
subclass of: SO_0000010

position:27721:1
position: 27721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28077:1
position: 28077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27721-28077:1:exon

HQN60_RS15815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15815
old locus tag: HQN60_15815
inference: COORDINATES: protein motif:HMM:TIGR03330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-adenosylmethionine decarboxylase
translation: MKVRSAAVLNSPLLLQRIFDEALLSFTVLKSDYFQFSGGGEGVTGFFLLSESHCSYHTYPENNYIAIDVFTCGKDPGNIAAILAKSLDAVTYNSRYILRGSKQAGLVMQQNKFAALTS
SIO_010081: HQN60_RS15815
subclass of: SO_0000673
so part of: HQN60_RS15815
location: 27721..28077
location: region:27721-28077:1
so has part: feature:27721-28077:1:exon

WP_254456727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27721-28077:1:exon

HQN60_RS15820
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15820
old locus tag: HQN60_15820
so part of: sequence
location: 28153..28491
location: region:28153-28491:1
so has part: feature:28153-28491:1:exon
subclass of: SO_0000010

position:28153:1
position: 28153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28491:1
position: 28491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28153-28491:1:exon

HQN60_RS15820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15820
old locus tag: HQN60_15820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006484329.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antibiotic biosynthesis monooxygenase
translation: MITATFIFDKKQFDDQFHALDKLIADAARASTDYLGEETWENPTSGRISTVYYWRTEIGLRELMVNPHHLEAKRRYSEWLSGYRVEIAKVLRCYGDGLLSSTVELSEMITTA
SIO_010081: HQN60_RS15820
subclass of: SO_0000673
so part of: HQN60_RS15820
location: 28153..28491
location: region:28153-28491:1
so has part: feature:28153-28491:1:exon

WP_173534779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28153-28491:1:exon

HQN60_RS15825
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15825
old locus tag: HQN60_15825
so part of: sequence
location: 28515..29699
location: region:28515-29699:1
so has part: feature:28515-29699:1:exon
subclass of: SO_0000010

position:28515:1
position: 28515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29699:1
position: 29699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28515-29699:1:exon

HQN60_RS15825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15825
old locus tag: HQN60_15825
EC number: 3.-.-.-
inference: COORDINATES: protein motif:HMM:NF012371.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydrolase
translation: MQPHSLLHRALGFFFVIIILWGICILTTNLLHIPSPSKLLGLGLELTPPSKSSSYFDARSISPAPSVRPLTQHPIKLDLLIPWKNGATLSLNEFLKETHTNAIVVLHENKIVYERYFNGYTESSLLPSYSVSKAILATLVGIAIDEKRIASINSDVRPMLPNEIRHQYPYPIRTWDLLNMRAGIAIPETYDSIFSKIAEMYISTDLRRFITSIPSPSGHPGARFEYRSAEYLLLGEVLRQATGQSLSSYLQKSIWHPMGAAYDATWSLDSSTSGIEKAFCCINARASDYARFGLLYLNEGIWNGKRIVPADWIRRTRIPTGYRESLGYSHGWWIPPKSSKDGDFSAIGIYGQYVYINPTKRTVIVKLSDHGAEADEILTLQAFQKISQSIQQKY
SIO_010081: HQN60_RS15825
subclass of: SO_0000673
so part of: HQN60_RS15825
location: 28515..29699
location: region:28515-29699:1
so has part: feature:28515-29699:1:exon

WP_254456728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28515-29699:1:exon

HQN60_RS15830
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15830
old locus tag: HQN60_15830
pseudo: true
so part of: sequence
location: <29795..>30028
location: region:29795-30028:1
so has part: feature:29795-30028:1:exon
subclass of: SO_0000010

position:29795:1
position: 29795
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:30028:1
position: 30028
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29795-30028:1:exon

HQN60_RS15830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15830
old locus tag: HQN60_15830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611369.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: HQN60_RS15830
subclass of: SO_0000673
so part of: HQN60_RS15830
location: <29795..>30028
location: region:29795-30028:1
so has part: feature:29795-30028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29795-30028:1:exon

HQN60_RS16270
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS16270
pseudo: true
so part of: sequence
location: 30096..>30982
location: region:30096-30982:1
so has part: feature:30096-30982:1:exon
subclass of: SO_0000010

position:30096:1
position: 30096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30982:1
position: 30982
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30096-30982:1:exon

HQN60_RS16270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS16270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611347.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: HQN60_RS16270
subclass of: SO_0000673
so part of: HQN60_RS16270
location: 30096..>30982
location: region:30096-30982:1
so has part: feature:30096-30982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30096-30982:1:exon

HQN60_RS15845
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15845
old locus tag: HQN60_15845
so part of: sequence
location: complement(30990..32366)
location: region:30990-32366:-1
so has part: feature:30990-32366:-1:exon
subclass of: SO_0000010

position:30990:-1
position: 30990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32366:-1
position: 32366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30990-32366:-1:exon

HQN60_RS15845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15845
old locus tag: HQN60_15845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010850118.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MLKLTGRGAMRSPGAPSLRRETERLFWEQIATGITSEKAAEAVGVSQAVGTRWFRYRGGMPLFMSKHISGRYLSFAEREEIGLLQAQSVGVREIARRLGRSPSTVSRELTRNAATRSGRLEYRASVAQWKAELAAKRPKPAKLVTNLRLRHYVQERLEGKVHGTDGLEIAGPRQTPFKGRNKPHRGDRKWVNGWSPEQIANRLQIDFPGDESMRISHEAIYQALYIQGRGALKRDLVSCLRTGRALRVPRARAQAKAWAHVSEDVMISNRPAEVEDRALPGHWEGDLIIGLNRSAIGTLVERSSRFTMLVHLPREEGYGQTPRVKNGPALAGYGAVTMGNALKKTVTSLPAQLWRSLTWDRGKELSDHARFTIESGIKVFFADPHSPWQRGTNENTNGLLRQYFPKGTDLSRWSAQEIQAVANTLNSRPRKTLGCKTPIEALNEYLKSVQQTSVATTG
SIO_010081: HQN60_RS15845
subclass of: SO_0000673
so part of: HQN60_RS15845
location: complement(30990..32366)
location: region:30990-32366:-1
so has part: feature:30990-32366:-1:exon

WP_173534783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30990-32366:-1:exon

HQN60_RS15850
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15850
old locus tag: HQN60_15850
pseudo: true
so part of: sequence
location: <32435..32731
location: region:32435-32731:1
so has part: feature:32435-32731:1:exon
subclass of: SO_0000010

position:32435:1
position: 32435
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:32731:1
position: 32731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32435-32731:1:exon

HQN60_RS15850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15850
old locus tag: HQN60_15850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: HQN60_RS15850
subclass of: SO_0000673
so part of: HQN60_RS15850
location: <32435..32731
location: region:32435-32731:1
so has part: feature:32435-32731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32435-32731:1:exon

HQN60_RS15855
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15855
old locus tag: HQN60_15855
so part of: sequence
location: complement(32829..33320)
location: region:32829-33320:-1
so has part: feature:32829-33320:-1:exon
subclass of: SO_0000010

position:32829:-1
position: 32829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33320:-1
position: 33320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32829-33320:-1:exon

HQN60_RS15855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15855
old locus tag: HQN60_15855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010672467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DinB family protein
translation: MHIFDHLLAMPDELKNLFDDFPSLLFHQEPESWDGIPGERFAITGQLCHLLDIEIQGYQHRFHRTVNETMPELPSLDGYLLAELNQYKQADPKQVLMQFRLARLQTVKMLKALKTEDYSRRANFGSYGEVSLLGLAHLLRSHDLQHLACMHWLRMRLLYSTEL
SIO_010081: HQN60_RS15855
subclass of: SO_0000673
so part of: HQN60_RS15855
location: complement(32829..33320)
location: region:32829-33320:-1
so has part: feature:32829-33320:-1:exon

WP_173534784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32829-33320:-1:exon

HQN60_RS15860
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15860
old locus tag: HQN60_15860
so part of: sequence
location: complement(33321..34748)
location: region:33321-34748:-1
so has part: feature:33321-34748:-1:exon
subclass of: SO_0000010

position:33321:-1
position: 33321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34748:-1
position: 34748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33321-34748:-1:exon

HQN60_RS15860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15860
old locus tag: HQN60_15860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015884886.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-lactate permease
translation: MTSILQLSPIVLVITMIMGFRKPPMYAALGGALLAFLLWLFDVAQPFLFSTLSSVFVDSLVLFMSTAFVIAPGLVFVIYLERAGANDALSKWVKQLGWQGAAQVVFLVLGLAPLLEAMTGFGVSLIATVPLLIALMGRKVALRVALTGMCIMPWGTLGLATVIGAELAGLPSQTLGAWTAWTSAPVFTAGVLLALWLAGHRKVTAYALGVVFSVAFVSILHLISRDVGPEVAGVGAAATVTLVGIIWARLHLKSNIRFPVEAWPYAALLIAIISLKATNLSLGLDTLWVIHGEQVSWKPLASPGIALLLVNFILMVKLGGEELAKPFLSRAKRPLITIFFFLFMSQLLVKAGFLDGVRLALSSLDTAALAPLIAAFGGLAGYITGSNVGGNAIVMPSIAHMNLPENVLSVLAAVQNSAAGHAALGSMPIVALLLGLAKGSAEEEQELIRFAFLLALFNVILVGSAGYLLISLTGG
SIO_010081: HQN60_RS15860
subclass of: SO_0000673
so part of: HQN60_RS15860
location: complement(33321..34748)
location: region:33321-34748:-1
so has part: feature:33321-34748:-1:exon

WP_173534785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33321-34748:-1:exon

HQN60_RS15865
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
gene: thrH
locus tag: HQN60_RS15865
old locus tag: HQN60_15865
so part of: sequence
location: complement(34829..35446)
location: region:34829-35446:-1
so has part: feature:34829-35446:-1:exon
subclass of: SO_0000010

position:34829:-1
position: 34829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35446:-1
position: 35446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34829-35446:-1:exon

HQN60_RS15865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
gene: thrH
locus tag: HQN60_RS15865
old locus tag: HQN60_15865
EC number: 3.1.3.3
inference: COORDINATES: protein motif:HMM:NF010109.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH
translation: MIFVCLDVEGVLLPEVWIEIAQATGVDELKLTTRDEPDFSLLMQHRIQTLRSRKIAYHDLKEIVCSVEPLSGAREFLDELRSSWPVALVSDSFYEFLGPLAPKLGLPSIFCHNLTVGDDGYLSGWKARLDDQKPKVVAAMQSLGFTVLAAGDSFNDLGMLEKADFGAFINAPEHIRQRFPNRESYDNLRDLKSAFQAQTIVKSLS
SIO_010081: HQN60_RS15865
subclass of: SO_0000673
so part of: HQN60_RS15865
location: complement(34829..35446)
location: region:34829-35446:-1
so has part: feature:34829-35446:-1:exon

WP_173534786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34829-35446:-1:exon

HQN60_RS15870
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15870
old locus tag: HQN60_15870
so part of: sequence
location: complement(35427..37292)
location: region:35427-37292:-1
so has part: feature:35427-37292:-1:exon
subclass of: SO_0000010

position:35427:-1
position: 35427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37292:-1
position: 37292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35427-37292:-1:exon

HQN60_RS15870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15870
old locus tag: HQN60_15870
inference: COORDINATES: protein motif:HMM:NF024846.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD/NAD(P)-binding domain-containing protein
translation: MVTPKFEVPTLLRVGIIGLGSRGLAILERLLALATELKEQHLHIIIFEPNQPGVGLHSCDQPDYLLLNTVAFQLSVFPDYAANQSAIERTGPDFYQWCIARGISFNEQPDATDQKLVAQTDFLPRRLIGEYLAWSFENITSILPPNVSLQLHRERAIKLQTTTEGGFLISSEAQIDIEVDKLFLTLGHTGRKVVTQTKRHITDVYPLPASIAEIDAGTVVGVEGFGLATMDVLASLSSGRGGRYIREDGLSHYLPSGNEPLIVLYSRTGLPFRVRPETTTTRKRHQPLFITPGLQLQLRKQNKEGQLDFVDDILPLMIAEMRAAFYLTHQQITESSDLSNDQLRDQLAHAFRSAKLDELFSALAEQYGSFDPLEYLPTELPPGLSGDKYVDWLVQFIKEDLAEGASGLTNSPIKAALEVWRDLRDTLRSLIDFKGLNETSHRDFYSSWVPLINRTVAGPQKERHQDFLALIAAGVVKLANPGDEPVWLEHKERYQLNSNHLPELDWLISARLPSSGLLNTDSSVLADLFSAGIVRPVYNSQGLDGVEIVGHGSPLNQAGCKVENLWVLGPLTEGATYYNHYIPSAGAYSRALSDAQGAVLECLGILAEPLIEKDCYDFCLP
SIO_010081: HQN60_RS15870
subclass of: SO_0000673
so part of: HQN60_RS15870
location: complement(35427..37292)
location: region:35427-37292:-1
so has part: feature:35427-37292:-1:exon

WP_173534787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35427-37292:-1:exon

HQN60_RS16275
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
gene: sbnB
locus tag: HQN60_RS16275
pseudo: true
so part of: sequence
location: complement(37286..39266)
location: region:37286-39266:-1
so has part: feature:37286-39266:-1:exon
subclass of: SO_0000010

position:37286:-1
position: 37286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39266:-1
position: 39266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37286-39266:-1:exon

HQN60_RS16275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
gene: sbnB
locus tag: HQN60_RS16275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002553438.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 2,3-diaminopropionate biosynthesis protein SbnB
SIO_010081: HQN60_RS16275
subclass of: SO_0000673
so part of: HQN60_RS16275
location: complement(37286..39266)
location: region:37286-39266:-1
so has part: feature:37286-39266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37286-39266:-1:exon

HQN60_RS15885
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
gene: tnpB
locus tag: HQN60_RS15885
old locus tag: HQN60_15885
so part of: sequence
location: 39875..40216
location: region:39875-40216:1
so has part: feature:39875-40216:1:exon
subclass of: SO_0000010

position:39875:1
position: 39875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40216:1
position: 40216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39875-40216:1:exon

HQN60_RS15885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
gene: tnpB
locus tag: HQN60_RS15885
old locus tag: HQN60_15885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020563554.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MLPPFASLQLVVEPVDMRLGIEGLSAKIHARLQRSPVEGAAYAFRNQRSNRLKVLLWDRSGVWLAQRRLHHGRFVWPQSGDAVFTLDAAQWQWLVSGVDWQRLAPPPLSEYAY
SIO_010081: HQN60_RS15885
subclass of: SO_0000673
so part of: HQN60_RS15885
location: 39875..40216
location: region:39875-40216:1
so has part: feature:39875-40216:1:exon

WP_173534792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39875-40216:1:exon

HQN60_RS15890
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS15890
old locus tag: HQN60_15890
pseudo: true
so part of: sequence
location: 40311..41941
location: region:40311-41941:1
so has part: feature:40311-41941:1:exon
subclass of: SO_0000010

position:40311:1
position: 40311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41941:1
position: 41941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40311-41941:1:exon

HQN60_RS15890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS15890
old locus tag: HQN60_15890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011236060.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: HQN60_RS15890
subclass of: SO_0000673
so part of: HQN60_RS15890
location: 40311..41941
location: region:40311-41941:1
so has part: feature:40311-41941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40311-41941:1:exon

HQN60_RS16280
type: Gene
subclass of: SO_0000704
RO_0002162: 2739061
locus tag: HQN60_RS16280
pseudo: true
so part of: sequence
location: <41928..>42202
location: region:41928-42202:1
so has part: feature:41928-42202:1:exon
subclass of: SO_0000010

position:41928:1
position: 41928
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:42202:1
position: 42202
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41928-42202:1:exon

HQN60_RS16280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2739061
locus tag: HQN60_RS16280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002717998.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
SIO_010081: HQN60_RS16280
subclass of: SO_0000673
so part of: HQN60_RS16280
location: <41928..>42202
location: region:41928-42202:1
so has part: feature:41928-42202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41928-42202:1:exon