Spirosoma taeanense strain TS118 plasmid pTS, complete sequence.
type: Entry
definition: Spirosoma taeanense strain TS118 plasmid pTS, complete sequence.
sequence version: NZ_CP053436.1
sequence date: 2022-10-06
sequence: sequence
division: CON
label: NZ_CP053436.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN14910880
keyword: RefSeq
source: Spirosoma taeanense
organism: Spirosoma taeanense
taxonomy: Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP053436.1.\nBacteria and source DNA available from Dr. Sangyong Lim in Korea\nAtomic Energy Research Institute(KAERI).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 176.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/06/2022 13:02:59\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 4,781\nCDSs (total) :: 4,730\nGenes (coding) :: 4,693\nCDSs (with protein) :: 4,693\nGenes (RNA) :: 51\nrRNAs :: 3, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 4, 4 (5S, 16S, 23S)\ntRNAs :: 38\nncRNAs :: 2\nPseudo Genes (total) :: 37\nCDSs (without protein) :: 37\nPseudo Genes (ambiguous residues) :: 0 of 37\nPseudo Genes (frameshifted) :: 18 of 37\nPseudo Genes (incomplete) :: 19 of 37\nPseudo Genes (internal stop) :: 4 of 37\nPseudo Genes (multiple problems) :: 4 of 37\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 28440
topology: circular
so has quality: SO_0000988
location: 1..28440
location: region:1-28440:1
RO_0002162: 2735870

NZ_CP053436
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN14910880
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of Spirosoma sp. TS118
author: Lee, J.-H.
author: Jeong, S.
author: Zhao, L.
author: Jung, J.-H.
author: Kim, M.-K.
author: Lim, S.
journal: Unpublished

2
title: Direct Submission
author: Lee, J.-H.
author: Jeong, S.
author: Zhao, L.
author: Jung, J.-H.
author: Kim, M.-K.
author: Lim, S.
journal: Submitted (13-MAY-2020) Radiation Research Division, Korea Atomic Energy Research Institute, 29 Geumgu-gil, Jeongeup-Si 56212, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28440:1
position: 28440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28440:1:source
so part of: sequence
organism: Spirosoma taeanense
mol type: genomic DNA
strain: TS118
type material: type strain of Spirosoma taeanense
plasmid: pTS
country: South Korea: Coasted Sand Dune,Taean
collection date: 2019-08-26
identified by: Dr. Ji-Hee Lee

2735870
type: Taxonomy
SIO_000068: taxonomy

HNV11_RS23645
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23645
old locus tag: HNV11_23650
so part of: sequence
location: 213..608
location: region:213-608:1
so has part: feature:213-608:1:exon
subclass of: SO_0000010

position:213:1
position: 213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608:1
position: 608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213-608:1:exon

HNV11_RS23645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23645
old locus tag: HNV11_23650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPNKAGQVVKFHSPYPDEDPNQLYVVLEVFDHERPRADIQALNTGLSFPPVNSVNLDDLEIVEVETKDLIGHQVTISTSDSSKVTGKVVQVRESKILLDMTKGGSDVATNVYLTIRDYNGIEHTGTLLVG
SIO_010081: HNV11_RS23645
subclass of: SO_0000673
so part of: HNV11_RS23645
location: 213..608
location: region:213-608:1
so has part: feature:213-608:1:exon

WP_171742298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213-608:1:exon

HNV11_RS23650
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
gene: vsr
locus tag: HNV11_RS23650
old locus tag: HNV11_23655
so part of: sequence
location: 707..1132
location: region:707-1132:1
so has part: feature:707-1132:1:exon
subclass of: SO_0000010

position:707:1
position: 707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132:1
position: 1132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707-1132:1:exon

HNV11_RS23650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
gene: vsr
locus tag: HNV11_RS23650
old locus tag: HNV11_23655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009597739.1
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch endonuclease Vsr
translation: MADVHTPEQRSFNMSRVKSKDTKPELMVRKFLHAHGFRYKLHDNTLPGKPDIVLPKYKTVIFVHGCFYHGHEGCRYFVVPKTRTEWWLNKINGNRLRDAANNARISEANWRIVTVFECELKPKSRQLTLQNLLGLLKPIST
SIO_010081: HNV11_RS23650
subclass of: SO_0000673
so part of: HNV11_RS23650
location: 707..1132
location: region:707-1132:1
so has part: feature:707-1132:1:exon

WP_171742299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707-1132:1:exon

HNV11_RS23655
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
gene: dcm
locus tag: HNV11_RS23655
old locus tag: HNV11_23660
so part of: sequence
location: 1158..2456
location: region:1158-2456:1
so has part: feature:1158-2456:1:exon
subclass of: SO_0000010

position:1158:1
position: 1158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2456:1
position: 2456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158-2456:1:exon

HNV11_RS23655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
gene: dcm
locus tag: HNV11_RS23655
old locus tag: HNV11_23660
EC number: 2.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013921730.1
GO function: GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA (cytosine-5-)-methyltransferase
translation: MVTENITTTDDRAVTEKAGHYNRIQIEPVKPVIRLADISSRSFKDLSKDEYASKMAYLTHYLHTRSNGASQYYEEEATGFVKQLIGADAANNPSEVKGILDVLEREVMDVPFPTPKTAKFKFIDLFAGIGGLRLAYQNLGGKCVFTSEWHPASQQTYAANFGEVPFGDITKISETAIPDHDVLLAGFPCQPFSIAGVSKKASLGREHGFKDETQGTLFFDVARIIEHKRPKAFMLENVKNLVSHDKKNTFRIIRETLNELRYNIHFRVLDGKHFVPQHRERIIIVGFDRDRYDDQEPFEFPELPAPTAAIEDILERDVPAKYTLTDNLWKYLQDYAAKHKAAGNGFGFGLTPLDGIARTLSARYHKDGSEILIPQALGQNPRRLTPRECARLQGFPDSFVIPVSDTQAYRQFGNSVVMPLMQAVGQQVVRCL
SIO_010081: HNV11_RS23655
subclass of: SO_0000673
so part of: HNV11_RS23655
location: 1158..2456
location: region:1158-2456:1
so has part: feature:1158-2456:1:exon

WP_240163995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1158-2456:1:exon

HNV11_RS23660
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23660
old locus tag: HNV11_23665
so part of: sequence
location: 2458..3759
location: region:2458-3759:1
so has part: feature:2458-3759:1:exon
subclass of: SO_0000010

position:2458:1
position: 2458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3759:1
position: 3759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2458-3759:1:exon

HNV11_RS23660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23660
old locus tag: HNV11_23665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013921731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MvaI/BcnI family restriction endonuclease
translation: MNLERLKRIFADQGCKKVYVKTLAKNDDSKHQPYLGGDEIFNLFPTSEIKAISSESWDRERFIATIDFAWIAEDGALFQAPNTKFILYPKYPEVRLSGFLRGCSNGPSRVMNTPLYGRLLFLSVSTAGRILGYAAFPDSQIAAELRAINTQQEGVFATFNLSNSDNRTILLNELARIHRLDWITSKRLDRLGNIMACDAPNCGGYTLEAELGITPNGYSEPDFLGWELKQFGVDNFNRIGSAVITLMTPEPTEGLYVSQGVDYFIRTYGYPDQNNRPDRLNFGGIHKAGVRHERTRLTMELIGFDGVTGKIRSSTGRIVLVDEQGNEAAAWSFASMLKHWNRKHNQACYVPSLSANQPVRQYHYGNLVTLGVDTDFQLFLQQMFIGNIYYDPGIKMENVSTRPTVKRRSQFRIKSSFLGNLYKSSEVVDVTHC
SIO_010081: HNV11_RS23660
subclass of: SO_0000673
so part of: HNV11_RS23660
location: 2458..3759
location: region:2458-3759:1
so has part: feature:2458-3759:1:exon

WP_171742300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2458-3759:1:exon

HNV11_RS23665
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23665
old locus tag: HNV11_23670
so part of: sequence
location: 4019..4990
location: region:4019-4990:1
so has part: feature:4019-4990:1:exon
subclass of: SO_0000010

position:4019:1
position: 4019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4990:1
position: 4990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4019-4990:1:exon

HNV11_RS23665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23665
old locus tag: HNV11_23670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQQNVKADPCSVLENININNTEHQKFILSRDKHTRIEGLVTEALFYDEIIKGQFKKCTSGFWFKRDGNRFKVTKVLVSSADLRQIDYDILNYFLLKGLSCYVVWFVPDQREFFYVKYVGQTINFESEHSKYPKNPKKALIPKETDRDCKRHQQASEYLERSGFLYKSAVERMFVNCWLGDVFLWDVDYIAVYKDHLVAFEVKQKYPTRMGTYGLNTGLVYLFSFLESVGIAVIHVVLRKPTRDFNIPAIDLYTKPEYRALTDWVAIRFKDEVLTKSQSKAPAFTSIGGGQALDYYHVDAERFVFLKRLGDPDNGLLSFLEKSV
SIO_010081: HNV11_RS23665
subclass of: SO_0000673
so part of: HNV11_RS23665
location: 4019..4990
location: region:4019-4990:1
so has part: feature:4019-4990:1:exon

WP_171742301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4019-4990:1:exon

HNV11_RS23670
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23670
old locus tag: HNV11_23675
so part of: sequence
location: 5052..5681
location: region:5052-5681:1
so has part: feature:5052-5681:1:exon
subclass of: SO_0000010

position:5052:1
position: 5052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5681:1
position: 5681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5052-5681:1:exon

HNV11_RS23670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23670
old locus tag: HNV11_23675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEEAKSYSQELPIGFKMWTEFYNRLIELDQINNEIIDYNGVFFKKSFISDRVDEEHKYSQELPPGYESWTDFYQSLEEGGKIETDDVIYERNMRVGGGRQLFGTEDVSAQYTYRKQFLIDMVNKEKKLNYNSMSQNKNTLISVAEGDYRIVVSLTSDGYEAQAFRNNQPATAKYSLSFPVAVNVKAYTDKSFTHLVDQLRADIREGRVI
SIO_010081: HNV11_RS23670
subclass of: SO_0000673
so part of: HNV11_RS23670
location: 5052..5681
location: region:5052-5681:1
so has part: feature:5052-5681:1:exon

WP_171742302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5052-5681:1:exon

HNV11_RS23675
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
gene: umuD
locus tag: HNV11_RS23675
old locus tag: HNV11_23680
so part of: sequence
location: 6514..6963
location: region:6514-6963:1
so has part: feature:6514-6963:1:exon
subclass of: SO_0000010

position:6514:1
position: 6514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6963:1
position: 6963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6514-6963:1:exon

HNV11_RS23675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
gene: umuD
locus tag: HNV11_RS23675
old locus tag: HNV11_23680
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009284331.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V autoproteolytic subunit
translation: MLDPHDRILPEHIVKATASTRYLIPFFSYYVQAGFPSPAENYIERVCDLNDLCISNAEATYFVQVASDSMIGDRIDRGDVLVVDCSREAIDHKIVVAWLNGDLCVKRIHYVNKMIVLLSSNQKYDPIYVHEGDEFRLLGVVTFVIQRLR
SIO_010081: HNV11_RS23675
subclass of: SO_0000673
so part of: HNV11_RS23675
location: 6514..6963
location: region:6514-6963:1
so has part: feature:6514-6963:1:exon

WP_171742303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6514-6963:1:exon

HNV11_RS23680
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23680
old locus tag: HNV11_23685
so part of: sequence
location: 6966..8246
location: region:6966-8246:1
so has part: feature:6966-8246:1:exon
subclass of: SO_0000010

position:6966:1
position: 6966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8246:1
position: 8246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6966-8246:1:exon

HNV11_RS23680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23680
old locus tag: HNV11_23685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018619742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Y-family DNA polymerase
translation: MFALVDANNFYVSCERSFNPALEKRPVVVLSNNDGCVVARSEQAKALGVKMAQPFFELEELRAQHDLAFFSSNYTLYADLSARLMSLLNRFVEDVEVYSIDEAFLELGGYEGLYPSFSNLGHCIRATALQWLRVPVSVGIAPTKTLAKVANWYAKRRPELRGVYQLVTKSDIREALTEFDVSDLWGVGRRYASLLKRNGITTAAQLRDAPDDWIAQNMTVNGLRLAYELRGTQCRMLEINPPPKKAICAAPSFGRLVPDLATMQDALTTHLSRACEKLRRQDSLCGTLTVFLHTNRFRRSPNGELAKQYYNARTVELPHPTSSTAELLQYAQTALTSIFQFGYNYQKVGLILTGLVPNDYRQKGVFVEGPDERLIKLSGVLDRLNRRHGRDRVRLASQTFNPDWPMKQQWLSPCYTTRWEDIMVAK
SIO_010081: HNV11_RS23680
subclass of: SO_0000673
so part of: HNV11_RS23680
location: 6966..8246
location: region:6966-8246:1
so has part: feature:6966-8246:1:exon

WP_171742304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6966-8246:1:exon

HNV11_RS23685
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23685
old locus tag: HNV11_23690
so part of: sequence
location: 8704..9039
location: region:8704-9039:1
so has part: feature:8704-9039:1:exon
subclass of: SO_0000010

position:8704:1
position: 8704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9039:1
position: 9039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8704-9039:1:exon

HNV11_RS23685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23685
old locus tag: HNV11_23690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKPGKKSPANAGNAAEELKDILATINELKGLLSGNEVALQKLKRLEKSCRKQSERVQKKVTASKSADRQAGKDWHNGATLLMRIEEFIEKHSGDIQNLGESISESISNLF
SIO_010081: HNV11_RS23685
subclass of: SO_0000673
so part of: HNV11_RS23685
location: 8704..9039
location: region:8704-9039:1
so has part: feature:8704-9039:1:exon

WP_171742305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8704-9039:1:exon

HNV11_RS23690
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23690
old locus tag: HNV11_23695
so part of: sequence
location: 9115..9471
location: region:9115-9471:1
so has part: feature:9115-9471:1:exon
subclass of: SO_0000010

position:9115:1
position: 9115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9471:1
position: 9471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9115-9471:1:exon

HNV11_RS23690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23690
old locus tag: HNV11_23695
inference: COORDINATES: protein motif:HMM:NF024252.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MTNGIGDAVKRYRTNIGFSQKELAELCGITPTYLSQIEKGKKRPSYSLLEKLCKYLKVEQKDLYKDLFIDSILKEDQSDEQREIVTLLRVLLEKMSNLQNKGKSGLTDKLNQQKLEHV
SIO_010081: HNV11_RS23690
subclass of: SO_0000673
so part of: HNV11_RS23690
location: 9115..9471
location: region:9115-9471:1
so has part: feature:9115-9471:1:exon

WP_171742306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9115-9471:1:exon

HNV11_RS23695
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23695
old locus tag: HNV11_23700
so part of: sequence
location: complement(9913..10290)
location: region:9913-10290:-1
so has part: feature:9913-10290:-1:exon
subclass of: SO_0000010

position:9913:-1
position: 9913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10290:-1
position: 10290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9913-10290:-1:exon

HNV11_RS23695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23695
old locus tag: HNV11_23700
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEFQKGDILEGTHREFAAAYHYIVYLGQSLDNAFVGVILTKSGSWANNVPLSENFFVREDEFGTSYKVQYKNSHFMQVKLDKPQDWGPYSKVGQITAEGVKFIEEHISGMEPISYQNYEKSLGTT
SIO_010081: HNV11_RS23695
subclass of: SO_0000673
so part of: HNV11_RS23695
location: complement(9913..10290)
location: region:9913-10290:-1
so has part: feature:9913-10290:-1:exon

WP_171742307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9913-10290:-1:exon

HNV11_RS23700
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23700
old locus tag: HNV11_23705
so part of: sequence
location: complement(10422..11291)
location: region:10422-11291:-1
so has part: feature:10422-11291:-1:exon
subclass of: SO_0000010

position:10422:-1
position: 10422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11291:-1
position: 11291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10422-11291:-1:exon

HNV11_RS23700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23700
old locus tag: HNV11_23705
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATTRVSANRRYLVLLLSTPVLVAVGPELVKASTTAFTTVFMYITRDNKEKVNPTKRPPAYKEVSELQKKLNPGAMQEDSIVESSRDGYFLTEDITYFDMSNWKPIPDTMKNPKKYSPVYFENFLRVVKTDTIKKIKIYMATSGSGIERLRCSSYNDSLRYAIEPKQKSHKIAYELSIDVSQEPVGQPFVLKICGTFWDSFRGKDDNWAETYTDSDVKHLKKLRLVVTLPPNKKFAAPEYAVTTGNDYKDFVMYRGDGRKLEDRSKNELSWDIEKPSSNKLYKMSWKWQ
SIO_010081: HNV11_RS23700
subclass of: SO_0000673
so part of: HNV11_RS23700
location: complement(10422..11291)
location: region:10422-11291:-1
so has part: feature:10422-11291:-1:exon

WP_171742308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10422-11291:-1:exon

HNV11_RS23705
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23705
old locus tag: HNV11_23710
so part of: sequence
location: 11934..12155
location: region:11934-12155:1
so has part: feature:11934-12155:1:exon
subclass of: SO_0000010

position:11934:1
position: 11934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12155:1
position: 12155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11934-12155:1:exon

HNV11_RS23705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23705
old locus tag: HNV11_23710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYTLNDSTAGSLHGAGSELSIIEFDLLAVSFPKDGDPNQQRHNEVLAHIAEARKIIAEMLRLSAPSFCMTTAA
SIO_010081: HNV11_RS23705
subclass of: SO_0000673
so part of: HNV11_RS23705
location: 11934..12155
location: region:11934-12155:1
so has part: feature:11934-12155:1:exon

WP_171742309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11934-12155:1:exon

HNV11_RS23710
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23710
old locus tag: HNV11_23715
so part of: sequence
location: 12344..12940
location: region:12344-12940:1
so has part: feature:12344-12940:1:exon
subclass of: SO_0000010

position:12344:1
position: 12344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12940:1
position: 12940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12344-12940:1:exon

HNV11_RS23710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23710
old locus tag: HNV11_23715
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKTITILQQKGGVGKTTLALNIALYVAQTGAAVAMCDADAQGSLSAVSGMIEGLEFVRTNEVLARTVDADLLVIDTSPRNDAELSRLLSLTDFALIPVKPGFLDVLAMRDTIAILSDVQATRPDLKAGIVLNMVQHRNAINRDADEMLKSFDTELLPVRIGQRVAYARTTLTNGVGNSQDEKAKEEIDQLVTLIFDRL
SIO_010081: HNV11_RS23710
subclass of: SO_0000673
so part of: HNV11_RS23710
location: 12344..12940
location: region:12344-12940:1
so has part: feature:12344-12940:1:exon

WP_171742310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12344-12940:1:exon

HNV11_RS23715
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23715
old locus tag: HNV11_23720
so part of: sequence
location: 12937..13191
location: region:12937-13191:1
so has part: feature:12937-13191:1:exon
subclass of: SO_0000010

position:12937:1
position: 12937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13191:1
position: 13191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12937-13191:1:exon

HNV11_RS23715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23715
old locus tag: HNV11_23720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPEEKKAALFGKLKEEPKPVTTKVVPVEAKPAKATKAAAEETEHFNVYLPVSLAKKIRLKKVELGKGATIQGIIIEALEQYFQ
SIO_010081: HNV11_RS23715
subclass of: SO_0000673
so part of: HNV11_RS23715
location: 12937..13191
location: region:12937-13191:1
so has part: feature:12937-13191:1:exon

WP_171742311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12937-13191:1:exon

HNV11_RS23720
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23720
old locus tag: HNV11_23725
so part of: sequence
location: 13188..13400
location: region:13188-13400:1
so has part: feature:13188-13400:1:exon
subclass of: SO_0000010

position:13188:1
position: 13188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13400:1
position: 13400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13188-13400:1:exon

HNV11_RS23720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23720
old locus tag: HNV11_23725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAAARNDIRSLSAELAAIEFRIVTIVGVGYSDLMTREMIDEARRLTERAAQLLADVAARAEPTDSPTLT
SIO_010081: HNV11_RS23720
subclass of: SO_0000673
so part of: HNV11_RS23720
location: 13188..13400
location: region:13188-13400:1
so has part: feature:13188-13400:1:exon

WP_171742312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13188-13400:1:exon

HNV11_RS23725
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23725
old locus tag: HNV11_23730
so part of: sequence
location: 13550..14215
location: region:13550-14215:1
so has part: feature:13550-14215:1:exon
subclass of: SO_0000010

position:13550:1
position: 13550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14215:1
position: 14215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13550-14215:1:exon

HNV11_RS23725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23725
old locus tag: HNV11_23730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTPRTPRSKIALAALFIALIVTIPGKAQEIKLKPLADYENSLKQYYTARLQADRLEFAEKTQKKWWYYLPTFGYAFRGPTVNVNTGLFAEIDKDNQTKKAQFSAITAQTELAYREELHQLRTQYRIMEVQREAITDIYVVEKIENRIYSVAEEANQQKQITPVEHSKALLLYQTQLLAHDTERRLFAQKIIELERLARFNYPTDLLENQTEWAQHPKPKL
SIO_010081: HNV11_RS23725
subclass of: SO_0000673
so part of: HNV11_RS23725
location: 13550..14215
location: region:13550-14215:1
so has part: feature:13550-14215:1:exon

WP_171742313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13550-14215:1:exon

HNV11_RS23730
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23730
old locus tag: HNV11_23735
so part of: sequence
location: 14896..16314
location: region:14896-16314:1
so has part: feature:14896-16314:1:exon
subclass of: SO_0000010

position:14896:1
position: 14896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16314:1
position: 16314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14896-16314:1:exon

HNV11_RS23730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23730
old locus tag: HNV11_23735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTVQKNVAPSYPYTAPAAPHKYIAHVAKIKPGKRVMVYKKFIGFKSSKSEAELLNLEKGKNGEYNGFMSPATSRKVRKMLENWLKAIECELTDTWAIDTRKAFTDPANHKRTYPTFVTLTLPARQMHDDNFIKRNLLNRFIINLKLQSGVEHYFWRAEPQKNGNIHFHLLVDRWIHWRSIRHDWNKILAEHGYIEAYKKVQEAKHAKGYTPDRKEYFARLNALREFSQHTKQPFDQKAAGVKVQAAMRKAYEEGIKTGWTDPNSTDIHAIEKVESLTAYVVKYVTKTDGADKVRDLNEDQTEEITTTRVRKIDGRIWGCSDGIRNLNHFEEAIAEEVDFQTFTYDNQAFDFIRHLESEAEKKNDKNEDNGVWRDKESGTVIYELDVEAHIILKALFPELFVKFAQHYKQMYAELYGQKPFTNVEQLLCSIITESVIMFDLSDKPADLSNYVQSTTLTSASSWFDPLESAPF
SIO_010081: HNV11_RS23730
subclass of: SO_0000673
so part of: HNV11_RS23730
location: 14896..16314
location: region:14896-16314:1
so has part: feature:14896-16314:1:exon

WP_171742314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14896-16314:1:exon

HNV11_RS23735
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23735
old locus tag: HNV11_23740
so part of: sequence
location: 16355..17095
location: region:16355-17095:1
so has part: feature:16355-17095:1:exon
subclass of: SO_0000010

position:16355:1
position: 16355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17095:1
position: 17095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16355-17095:1:exon

HNV11_RS23735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23735
old locus tag: HNV11_23740
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSGQIEYETETTELDDYADLFSPNELTGARIAADAKAKVTFEYMNNEGEVITREWETITLWYYGSSEPTPGANTRYQKPRSIVKHPANNRSYTRKSLLPGWYMIQLDDRSTFQVQKFEAGSDGLYVFNDQGSPGKPLFSGYYSSYGKIKFTFGSVKATKTKPAVSTKAQAFLTLTKNSLDLQFWLYNDRTTGSVTKSLFWFMPAGVYSANWYGIQLQGDSDSQQSTHKSGTIIVAPGKTYPNIKL
SIO_010081: HNV11_RS23735
subclass of: SO_0000673
so part of: HNV11_RS23735
location: 16355..17095
location: region:16355-17095:1
so has part: feature:16355-17095:1:exon

WP_171742315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16355-17095:1:exon

HNV11_RS23740
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23740
old locus tag: HNV11_23745
so part of: sequence
location: 17183..17743
location: region:17183-17743:1
so has part: feature:17183-17743:1:exon
subclass of: SO_0000010

position:17183:1
position: 17183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17743:1
position: 17743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17183-17743:1:exon

HNV11_RS23740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23740
old locus tag: HNV11_23745
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKVFSFCAVIIGSMLTFQACNKNVADNVTPQNSQIASLEAIEEVFDDTDPGARSAAADPIDKANKVYQVFTTSSPCSTTGTNTSVRLAVTTQTISASTLPDSTVKSKNGYSLFSVKAEKFGQYLKKTVDKSKSQTYFMKEGDGKTATWKKVATIPANGATFTFMPNYYKQGLTMTCTSSSVAPLN
SIO_010081: HNV11_RS23740
subclass of: SO_0000673
so part of: HNV11_RS23740
location: 17183..17743
location: region:17183-17743:1
so has part: feature:17183-17743:1:exon

WP_171742316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17183-17743:1:exon

HNV11_RS23745
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23745
old locus tag: HNV11_23750
so part of: sequence
location: 17810..18691
location: region:17810-18691:1
so has part: feature:17810-18691:1:exon
subclass of: SO_0000010

position:17810:1
position: 17810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18691:1
position: 18691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17810-18691:1:exon

HNV11_RS23745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23745
old locus tag: HNV11_23750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNALVVVLALIALASCEALETRQPNDIDDTSEIVAESRELTDAEIEASSDEQDESDPNARESATATTSQYFQCKTDDGELYTPDFVIYDYWYATEAQARAAYSAWSTTSDTTHGSYVTDKKKGVKVKVTKGTQLVKSMSMRHGWHIVKPGPDDGAPSNVFEIKPGVKGTVELSWSGYDADYKLDQGLLRVSFKYQGGSGNRRIAYWTPAVSNKTWAQYMLGSPNLDTIEDLFLFEAETTEAKSVAIRVPRFKGYVFSYLTNREVEGSKPGGKDADLMTKKGLSITFFKKPKG
SIO_010081: HNV11_RS23745
subclass of: SO_0000673
so part of: HNV11_RS23745
location: 17810..18691
location: region:17810-18691:1
so has part: feature:17810-18691:1:exon

WP_171742317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17810-18691:1:exon

HNV11_RS23750
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23750
old locus tag: HNV11_23755
so part of: sequence
location: 18820..19353
location: region:18820-19353:1
so has part: feature:18820-19353:1:exon
subclass of: SO_0000010

position:18820:1
position: 18820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19353:1
position: 19353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18820-19353:1:exon

HNV11_RS23750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23750
old locus tag: HNV11_23755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVVTTVFAALLSFILLGVIACQQEDTPAPKPQPVPSYFTGYDFAPKVVDDDNARAYGSLCDNTEPQDLDLNVYEFEPDTNIDEDVADIMIPTYDEDGEPEEGPTATAIISVRKQYTTPEGAKVSDYDRMKRFVIDVEKNTINVLTIEKDNGEVILYGVFDTRNANATPAEICFKKP
SIO_010081: HNV11_RS23750
subclass of: SO_0000673
so part of: HNV11_RS23750
location: 18820..19353
location: region:18820-19353:1
so has part: feature:18820-19353:1:exon

WP_171742318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18820-19353:1:exon

HNV11_RS23755
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23755
old locus tag: HNV11_23760
so part of: sequence
location: 19534..19926
location: region:19534-19926:1
so has part: feature:19534-19926:1:exon
subclass of: SO_0000010

position:19534:1
position: 19534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19926:1
position: 19926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19534-19926:1:exon

HNV11_RS23755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23755
old locus tag: HNV11_23760
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQILESGQVVNTADKTIHQTRIPGLGKLEYSFNWNNKLDCLHYTTMRLENPGKYQVGRKFGVYLNGKHIHDAQVIEVKSLTINQITEWSARLDTGLSKAKCIDLLKTMYKNKQIDWTTQKLNWVLLEKL
SIO_010081: HNV11_RS23755
subclass of: SO_0000673
so part of: HNV11_RS23755
location: 19534..19926
location: region:19534-19926:1
so has part: feature:19534-19926:1:exon

WP_171742319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19534-19926:1:exon

HNV11_RS23760
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23760
old locus tag: HNV11_23765
so part of: sequence
location: 19931..21193
location: region:19931-21193:1
so has part: feature:19931-21193:1:exon
subclass of: SO_0000010

position:19931:1
position: 19931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21193:1
position: 21193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19931-21193:1:exon

HNV11_RS23760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23760
old locus tag: HNV11_23765
inference: COORDINATES: protein motif:HMM:NF016214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MQSFNHVAGGFAFTGILASFADVNIFADADVMAVVWVAAVLPDIDHTKSISGKVVYPLAHWLQIKYGHRTVTHSIFFYIAVVVIVQAADNLFHLHYTLPVALALGSHLIFDMCTRQGIPLFYPFSRRPAVLPANPKLRLSASDYRSEAIVFLLFCCLNVFSYPLMAAGFWNKYNRAFATFDHLESEVRRKPGDYELRLLTPEQDTVTATLVEQKPAELVVYRQSQFRKFDTQQSRLIDFRRLPTHHQFVTINLINVSCDSLNTYMKLPVVKVTAQADSNELFYFEGPIMKKGLNLTIDYPNEARFQQLAIDNRQTEFQLKMLIAQYNVEKAQYNQKLSELKMLRVALHNETTRTGVNDYDEGVRRERIKEYTKQISEFVNPLPPSTEIYHVQRAMLEMKLRENAHLNATILIWQAQANQN
SIO_010081: HNV11_RS23760
subclass of: SO_0000673
so part of: HNV11_RS23760
location: 19931..21193
location: region:19931-21193:1
so has part: feature:19931-21193:1:exon

WP_171742320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19931-21193:1:exon

HNV11_RS23765
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23765
old locus tag: HNV11_23770
so part of: sequence
location: 21387..22904
location: region:21387-22904:1
so has part: feature:21387-22904:1:exon
subclass of: SO_0000010

position:21387:1
position: 21387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22904:1
position: 22904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21387-22904:1:exon

HNV11_RS23765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23765
old locus tag: HNV11_23770
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MEELKVEFHTAEEQAAIIANLKNPEHKVIALLMLDTGGRVSEVCKLTWEKCDFRAKTVTIKTSKQRGKEKARCLPMSERLYAAFDELVKQRNKEGAALKGFVFPGNDRGHIYRTAPYMMLKRLQAKAPQVGDVRPHKLRHTFATNLVAQGTELIDIRNMLGHSDSRVTEIYTHTNPERLRAQINASAPRPSVFERLKARLLPKQRTLINLVITDVDFIVGREKEQKQIQSLISRGISVLITGAIGAGKTHLLQSLNFDKPTLVIDDASDFKKSITAAILHICGDKETAAAMLFKTSDLKAVETKLSTSSLPNLVQTLKDCTQPNEYLLKIGNIDGVTPKGVKILEDLKDHFTIITTARGIKMEAASFAWSFEKIELQPLTRPDSLRMIYRLIGDLQTSELDAVMTKIYETSDGNPRKIKELCERLRREPFVNLDSATEVADSYLGRQVEEFDFSIILLVILGGFVLMRYYGRVTGEKDLQFIGACIMFVLMFARYLFKSARRKTL
SIO_010081: HNV11_RS23765
subclass of: SO_0000673
so part of: HNV11_RS23765
location: 21387..22904
location: region:21387-22904:1
so has part: feature:21387-22904:1:exon

WP_171742321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21387-22904:1:exon

HNV11_RS23770
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23770
old locus tag: HNV11_23775
so part of: sequence
location: complement(22960..23232)
location: region:22960-23232:-1
so has part: feature:22960-23232:-1:exon
subclass of: SO_0000010

position:22960:-1
position: 22960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23232:-1
position: 23232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22960-23232:-1:exon

HNV11_RS23770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23770
old locus tag: HNV11_23775
inference: COORDINATES: protein motif:HMM:NF013540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MNKSAFFAETQNSLCMENSESAKRLKAIVVALDMKVTDFGEAIGVKQQQIYDWTSGKFIPKFPVWVQIAERFPQLSAEFILRGKGAVLNE
SIO_010081: HNV11_RS23770
subclass of: SO_0000673
so part of: HNV11_RS23770
location: complement(22960..23232)
location: region:22960-23232:-1
so has part: feature:22960-23232:-1:exon

WP_171742322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22960-23232:-1:exon

HNV11_RS23775
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23775
old locus tag: HNV11_23780
so part of: sequence
location: complement(23646..23990)
location: region:23646-23990:-1
so has part: feature:23646-23990:-1:exon
subclass of: SO_0000010

position:23646:-1
position: 23646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23990:-1
position: 23990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23646-23990:-1:exon

HNV11_RS23775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23775
old locus tag: HNV11_23780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTALLITRSATGAAHYAQVRAALAELGTTEVLHGAEGAGLLHGQRWAQETGNAETGFAPDWQQHGRAAGPIRGRELVRAADNVLALWDGKSRGTANELREARRQGKQVKLLMI
SIO_010081: HNV11_RS23775
subclass of: SO_0000673
so part of: HNV11_RS23775
location: complement(23646..23990)
location: region:23646-23990:-1
so has part: feature:23646-23990:-1:exon

WP_171742323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23646-23990:-1:exon

HNV11_RS23780
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23780
old locus tag: HNV11_23785
so part of: sequence
location: 24243..24563
location: region:24243-24563:1
so has part: feature:24243-24563:1:exon
subclass of: SO_0000010

position:24243:1
position: 24243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24563:1
position: 24563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24243-24563:1:exon

HNV11_RS23780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23780
old locus tag: HNV11_23785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQVSFYKSGTHYFAICGTVIEQVCLSVLCEKVYWAEIRQTELLPNQVAGYQKGLAISKEEYELVRYQAQELLLLPFWSEGHAEIVRYTEADINLMQGYSAQVNKR
SIO_010081: HNV11_RS23780
subclass of: SO_0000673
so part of: HNV11_RS23780
location: 24243..24563
location: region:24243-24563:1
so has part: feature:24243-24563:1:exon

WP_171742324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24243-24563:1:exon

HNV11_RS23785
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23785
old locus tag: HNV11_23790
so part of: sequence
location: 24618..24806
location: region:24618-24806:1
so has part: feature:24618-24806:1:exon
subclass of: SO_0000010

position:24618:1
position: 24618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24806:1
position: 24806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24618-24806:1:exon

HNV11_RS23785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23785
old locus tag: HNV11_23790
inference: COORDINATES: protein motif:HMM:NF020421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SymE family type I addiction module toxin
translation: MQTRTKKVQAKYSITGSIGFKKTRIIPSLELSGDWFSAAGFAPGQLATIEVINGQITIKPAV
SIO_010081: HNV11_RS23785
subclass of: SO_0000673
so part of: HNV11_RS23785
location: 24618..24806
location: region:24618-24806:1
so has part: feature:24618-24806:1:exon

WP_171742325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24618-24806:1:exon

HNV11_RS23790
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23790
old locus tag: HNV11_23795
so part of: sequence
location: 24866..25561
location: region:24866-25561:1
so has part: feature:24866-25561:1:exon
subclass of: SO_0000010

position:24866:1
position: 24866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25561:1
position: 25561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24866-25561:1:exon

HNV11_RS23790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23790
old locus tag: HNV11_23795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSTPKLPQPISQEARQLIKPYQYIDRQTGEVKNGIKYVEGQPLNIRFNGQTGRFTRDGQQDLGPRIEIVPVCFRAFKGSLFGRQPAKYVEVFYVDGQRNLCVVLFTNATAENFVKFAASLYYSDNTQTITNSRIAISAAVRIRKSDSQRYHVAEFENLGLASPDAVDAFRAFGLDHKIYRAETRNQPGTATDVEDGKHSSLYFPMWGMGVREAAPADAEEARQLQASYTR
SIO_010081: HNV11_RS23790
subclass of: SO_0000673
so part of: HNV11_RS23790
location: 24866..25561
location: region:24866-25561:1
so has part: feature:24866-25561:1:exon

WP_171742326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24866-25561:1:exon

HNV11_RS23795
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23795
old locus tag: HNV11_23800
so part of: sequence
location: 25691..25993
location: region:25691-25993:1
so has part: feature:25691-25993:1:exon
subclass of: SO_0000010

position:25691:1
position: 25691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25993:1
position: 25993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25691-25993:1:exon

HNV11_RS23795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23795
old locus tag: HNV11_23800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFNQIKQFDQFPTYGEDDFNEFRDWLIDEIITEVEDCDRKEVGYTAAALATWIAGRLKIQIHRDEETAWSSQIRVLVPIALERRRMTRDEQKGQYSLKF
SIO_010081: HNV11_RS23795
subclass of: SO_0000673
so part of: HNV11_RS23795
location: 25691..25993
location: region:25691-25993:1
so has part: feature:25691-25993:1:exon

WP_171742327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25691-25993:1:exon

HNV11_RS23800
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23800
old locus tag: HNV11_23805
so part of: sequence
location: 26046..26405
location: region:26046-26405:1
so has part: feature:26046-26405:1:exon
subclass of: SO_0000010

position:26046:1
position: 26046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26405:1
position: 26405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26046-26405:1:exon

HNV11_RS23800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23800
old locus tag: HNV11_23805
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNETPRARTRSGKIKRTERVEVRATADEKASVKTLMQRRGKTSEADAIFTAVREAIHRDSVDGLIDDLRLMMNTAKVDNYRIKADTGRASEYLDGVEVTVGKVLTMLETIRNPHLKLPA
SIO_010081: HNV11_RS23800
subclass of: SO_0000673
so part of: HNV11_RS23800
location: 26046..26405
location: region:26046-26405:1
so has part: feature:26046-26405:1:exon

WP_171742328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26046-26405:1:exon

HNV11_RS23805
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23805
old locus tag: HNV11_23810
so part of: sequence
location: 26405..26767
location: region:26405-26767:1
so has part: feature:26405-26767:1:exon
subclass of: SO_0000010

position:26767:1
position: 26767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26405-26767:1:exon

HNV11_RS23805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23805
old locus tag: HNV11_23810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPYRHTTDDQPTYNELRGTFAGAADALSESEPEPTYVPTPRRWQVGDLLKHRTYGNCLILRKQVGVFHNYDLIAEDGYQFQTQEPTNFLHNTGLTYQYKDFAQTASDYRAGLFTPYFEIL
SIO_010081: HNV11_RS23805
subclass of: SO_0000673
so part of: HNV11_RS23805
location: 26405..26767
location: region:26405-26767:1
so has part: feature:26405-26767:1:exon

WP_171742329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26405-26767:1:exon

HNV11_RS23810
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23810
old locus tag: HNV11_23815
so part of: sequence
location: 27124..27627
location: region:27124-27627:1
so has part: feature:27124-27627:1:exon
subclass of: SO_0000010

position:27124:1
position: 27124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27627:1
position: 27627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27124-27627:1:exon

HNV11_RS23810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23810
old locus tag: HNV11_23815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKNPSFILTLLILFISGCSKTKNGFSLDELNSLSSMNINEFESYVLSKGYELRENTASFYYYGKSVNDPRIEDSVDDIISWEEDEGKQTVAYQCSNKDYYLKIKEEVAKSDFKFINRVVSLSMIDTKLNYSDKDISLTLVTIPKSKKIGTEKNYYRIEITRSLQSD
SIO_010081: HNV11_RS23810
subclass of: SO_0000673
so part of: HNV11_RS23810
location: 27124..27627
location: region:27124-27627:1
so has part: feature:27124-27627:1:exon

WP_171742330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27124-27627:1:exon

HNV11_RS23815
type: Gene
subclass of: SO_0000704
RO_0002162: 2735870
locus tag: HNV11_RS23815
old locus tag: HNV11_23820
so part of: sequence
location: 28178..28411
location: region:28178-28411:1
so has part: feature:28178-28411:1:exon
subclass of: SO_0000010

position:28178:1
position: 28178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28411:1
position: 28411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28178-28411:1:exon

HNV11_RS23815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735870
locus tag: HNV11_RS23815
old locus tag: HNV11_23820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKNTAFVDELQGFADQVKTEPVQKVSSLQPPAASSKEEQQLNVWIPKDLMKRLKVKGAETDRSLKEMVTEALEQFL
SIO_010081: HNV11_RS23815
subclass of: SO_0000673
so part of: HNV11_RS23815
location: 28178..28411
location: region:28178-28411:1
so has part: feature:28178-28411:1:exon

WP_171742331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28178-28411:1:exon