Thiothrix subterranea strain Ku-5 plasmid pTSUKu5_27_unt8, complete sequence.
type: Entry
definition: Thiothrix subterranea strain Ku-5 plasmid pTSUKu5_27_unt8, complete sequence.
sequence version: NZ_CP053484.1
sequence date: 2022-11-24
sequence: sequence
division: CON
label: NZ_CP053484.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN14887016
keyword: RefSeq
source: Thiothrix subterranea
organism: Thiothrix subterranea
taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP053484.1.\nBacteria and source DNA available from Margarita Grabovich.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 09-FEB-2020\nAssembly Method :: HGAP v. 2.3.0\nAssembly Name :: Thiotrix_Q5_HGAP3_2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 174.63x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/24/2022 02:04:15\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,040\nCDSs (total) :: 3,978\nGenes (coding) :: 3,922\nCDSs (with protein) :: 3,922\nGenes (RNA) :: 62\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 4\nPseudo Genes (total) :: 56\nCDSs (without protein) :: 56\nPseudo Genes (ambiguous residues) :: 0 of 56\nPseudo Genes (frameshifted) :: 12 of 56\nPseudo Genes (incomplete) :: 44 of 56\nPseudo Genes (internal stop) :: 2 of 56\nPseudo Genes (multiple problems) :: 2 of 56\nCRISPR Arrays :: 4\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 26592
topology: circular
so has quality: SO_0000988
location: 1..26592
location: region:1-26592:1
RO_0002162: 2735563

NZ_CP053484
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN14887016
type: BioSample
SIO_000068: biosample

1
title: Complete genome and methylome analysis of filamentous colorless sulfur bacteria Thiothrix subterranea sp. nov. Ku-5
author: Fomenkov, A.
author: Smolyakov, D.
author: Rudenko, T.
author: Markov, N.
author: Karnachuk, O.
author: Grabovich, M.
author: Roberts, R.J.
journal: Unpublished

2
title: Direct Submission
author: Fomenkov, A.
author: Smolyakov, D.
author: Rudenko, T.
author: Markov, N.
author: Karnachuk, O.
author: Grabovich, M.
author: Roberts, R.J.
journal: Submitted (14-MAY-2020) Genome Biology, NEB, 240 County Rd, Ipswich, MA 01938, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26592:1
position: 26592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26592:1:source
so part of: sequence
organism: Thiothrix subterranea
mol type: genomic DNA
strain: Ku-5
isolation source: underground horizons of a flooded mine in Russia
type material: type strain of Thiothrix subterranea
plasmid: pTSUKu5_27_unt8
country: Russia

2735563
type: Taxonomy
SIO_000068: taxonomy

HMY34_RS19915
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19915
old locus tag: HMY34_19870
so part of: sequence
location: join(26588..26592,1..376)
location: region:1-26592:1
so has part: feature:26588-26592:1:exon
so has part: feature:1-376:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:26588-26592:1:exon

position:26588:1
position: 26588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-376:1:exon

position:376:1
position: 376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMY34_RS19915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19915
old locus tag: HMY34_19870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADFWLIIRMKPHTTFALVAIAAVISLAGCQLKEDSMNYFQNESEVMIIKGENHDLNIENRLDRVSLYGSVDITHDRAGLEQALRLKGVVDGMVAVLSEEQEKGGLPDKVESTVVGVTGNSFDDHR
SIO_010081: HMY34_RS19915
subclass of: SO_0000673
so part of: HMY34_RS19915
location: join(26588..26592,1..376)
location: region:1-26592:1
so has part: feature:26588-26592:1:exon
so has part: feature:1-376:1:exon

WP_228288072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26588-26592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-376:1:exon

HMY34_RS19920
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19920
old locus tag: HMY34_19875
so part of: sequence
location: 504..1289
location: region:504-1289:1
so has part: feature:504-1289:1:exon
subclass of: SO_0000010

position:504:1
position: 504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289:1
position: 1289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504-1289:1:exon

HMY34_RS19920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19920
old locus tag: HMY34_19875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEFLGIVVSLIGIFIPIIELFLKKSSGTGDGEPSVVNITQYFFGGANQRGRRNNTEKNIDRVVDLIRKDYNFLVSSTPIIFAMSIVFSIGTFAVQEIDHTWFFVADYVHGILQNGTINKEFAYVISFAIPFVGFFSVSYFALWYICDLRLRTSINNAGCLGDTPKLEKIKNIFFNSGEIAHFNIYPMQTINRLIENGKIKKRNSRKVKRNHESEQGFFSQKLVVFSIAIMLMMHFSFKFFFSDTAIKQASKSNPTYDRYK
SIO_010081: HMY34_RS19920
subclass of: SO_0000673
so part of: HMY34_RS19920
location: 504..1289
location: region:504-1289:1
so has part: feature:504-1289:1:exon

WP_202719304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504-1289:1:exon

HMY34_RS19925
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19925
old locus tag: HMY34_19880
so part of: sequence
location: 1286..1495
location: region:1286-1495:1
so has part: feature:1286-1495:1:exon
subclass of: SO_0000010

position:1286:1
position: 1286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1495:1
position: 1495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286-1495:1:exon

HMY34_RS19925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19925
old locus tag: HMY34_19880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPSPDDYQTRIEALRTCIYSEYDPAIDALIAELEAVGRLEEYEAVLTEIDKSRDWELKQLVMDTLARL
SIO_010081: HMY34_RS19925
subclass of: SO_0000673
so part of: HMY34_RS19925
location: 1286..1495
location: region:1286-1495:1
so has part: feature:1286-1495:1:exon

WP_202719305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1286-1495:1:exon

HMY34_RS19930
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19930
old locus tag: HMY34_19885
so part of: sequence
location: 1685..1867
location: region:1685-1867:1
so has part: feature:1685-1867:1:exon
subclass of: SO_0000010

position:1685:1
position: 1685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867:1
position: 1867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1685-1867:1:exon

HMY34_RS19930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19930
old locus tag: HMY34_19885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEEKTNFGATAKANVGMSLNGKMSEQGADIAARWIGLGFVIVCTAILLWVLFPNGIYQP
SIO_010081: HMY34_RS19930
subclass of: SO_0000673
so part of: HMY34_RS19930
location: 1685..1867
location: region:1685-1867:1
so has part: feature:1685-1867:1:exon

WP_202719306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1685-1867:1:exon

HMY34_RS19935
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19935
old locus tag: HMY34_19890
so part of: sequence
location: complement(1876..6864)
location: region:1876-6864:-1
so has part: feature:1876-6864:-1:exon
subclass of: SO_0000010

position:1876:-1
position: 1876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6864:-1
position: 6864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1876-6864:-1:exon

HMY34_RS19935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19935
old locus tag: HMY34_19890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020308060.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MTPLQTLLTTYRDASQTHREKGTYFEDLICTYLRNEASYRDLYSKVWTYADWAREQGLDARDTGIDLVAQTHGTNEFHAIQCKFYAPDYRIQKRDIDSFFTASGKKPFTHRLIIVTTNNWSEHADDALRDQQPPVSKIDLNDLENSQIDWSRYQPNQPAVFKAKKQLRDHQKKALAKVQQGLQTADRGKLIMACGTGKTFTSLKIAESLAGSGKRVLFLVPSLSLLSQTLTEWTQESATPLHSFAVCSDSDVGNKRKKDDDIVQTFAHELRYPATTKPDRLAQELGKRHDSHHMSVVFSTYHSIDVISKAQQAHGLAGFDLIICDEAHRTTGATFDDEDESSFVKVHDAAFIQASKRLYMTATPRIYADSTKVTAERDNVALCSMDNAALYGQDLYVISFSEAVKQGLLVDYKVLVLSIDEAHISRSLQNLLKDEDNQLKVDDAAKIVGCWKALSKQGTTQDLVDDQAFMRRAVAFCQVIEPAKNPKYHKVSSKNIAAMFQEVVEAYQEHEREQQTAFETPPTLTLDCEAAHVDGGMNASQKEAKLNWLKAETPDNTCRILSNVRCLSEGVDVPALDAVLFLTPRNSQVDVVQSVGRVMRLAPGKKRGYIILPVVIPAGVEPHKALEDNKTYKVVWQVLQALRSHDDRFDAMVNKLDLNGPDTSKMEVIAITDKIAKKANKPTKKDTGKGEFGIGKNPPKRGKGGKGDGTGSEQMDLTLEVDEIQRAIYAKIVKKVGNRGHWEDWANDIAKIARTHITRIQAILDTPSNSAEIAAFQAFAGELRDDLNNAITDGEIVEMLAQHLITKPVFEALFKDYSFAEHNPMSKAMQDVLEKLEAHRLDKEADTLQAFYDSVKMRAEGIDNAAGKQKIVVELYDKFFRNAFPRMTERLGIVYTPVEVVDFIIHSVNDVLQSEFGQTLGDENVHIIDPFTGTGTFITRLLQSGLITPEQLPYKYQHEIHANEIVLLAYYIAAINIEAVYHDLVGGEYQPFNGICLTDTFQLHEKPDLVDKILVDNSARRVKQKALDIRVIIGNPPYSIGQKSENDNNDNVIYPHLDNRIRSTYAAQSKAILSKGLYDSYIRAIRWASDRIGDSGVMGFVSGNGFVEKSSMDGLRKCFADEFSSLYVFNLRGDIRKNMLSKGKAMEGQNVFGSGSMTGIAITLFIKNPKATEQGKIHYFDIGNDLKQAEKLETISDFKSINGIAAVNGWQRITPDEHSDWLKQRDDSFSEFISMGDKKDKSSVTIFENFSLGVVTNRDAWCYNASKVGVSVNMKRMIVFYNAESKRFNAVHIGLDKKAREAQVDGFINTDPTQISWTRSLKHELAKDTQFAFESDCLTPSVYRPFSKQWMYFNRRFNEMVYQMPRIFPDSSVENRVICVSGVGGRSGFSALMMGSISNLDTIEKGQCFPLKLYEKAEVESDGGIWKNHELFPIGAAITNERTNERTNERTNYTAKDGIGDTGLLHFQAAYPTETISKEDLFYYIYGLLHSEDYKAKYADNLTKELPRIPAVKQAADFWHFSTAGRELAELHVNYETQAPYPVTLDCGSRKLAELQDKDFYVTKMKFASKGDKSTVVYNHAITIKGIPLAAYDYVVNGKPALEWVMERQGVSTHKDSGIVNDANDWAIETMKNARYPLELFQRVITVSLRTMEIVRGLPGLG
SIO_010081: HMY34_RS19935
subclass of: SO_0000673
so part of: HMY34_RS19935
location: complement(1876..6864)
location: region:1876-6864:-1
so has part: feature:1876-6864:-1:exon

WP_202719307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1876-6864:-1:exon

HMY34_RS19940
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19940
old locus tag: HMY34_19895
so part of: sequence
location: 7107..7250
location: region:7107-7250:1
so has part: feature:7107-7250:1:exon
subclass of: SO_0000010

position:7107:1
position: 7107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7250:1
position: 7250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7107-7250:1:exon

HMY34_RS19940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19940
old locus tag: HMY34_19895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMSRPNVTTCPRCGARAHRTRPSWWKRLWLGRLSQYFCAACQHRFNR
SIO_010081: HMY34_RS19940
subclass of: SO_0000673
so part of: HMY34_RS19940
location: 7107..7250
location: region:7107-7250:1
so has part: feature:7107-7250:1:exon

WP_202719308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7107-7250:1:exon

HMY34_RS19945
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19945
old locus tag: HMY34_19900
so part of: sequence
location: 7253..7471
location: region:7253-7471:1
so has part: feature:7253-7471:1:exon
subclass of: SO_0000010

position:7253:1
position: 7253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7471:1
position: 7471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7253-7471:1:exon

HMY34_RS19945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19945
old locus tag: HMY34_19900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASKVKRVATTKTQKKPVIPPKTTKPRRNRQIQRAWWDVLLDYLGNFILLLLVSALILGVAHLFLDFFDWLP
SIO_010081: HMY34_RS19945
subclass of: SO_0000673
so part of: HMY34_RS19945
location: 7253..7471
location: region:7253-7471:1
so has part: feature:7253-7471:1:exon

WP_202719309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7253-7471:1:exon

HMY34_RS19950
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19950
old locus tag: HMY34_19905
so part of: sequence
location: 7540..8487
location: region:7540-8487:1
so has part: feature:7540-8487:1:exon
subclass of: SO_0000010

position:7540:1
position: 7540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8487:1
position: 8487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7540-8487:1:exon

HMY34_RS19950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19950
old locus tag: HMY34_19905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003159119.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MALTKDQILQAADQLAAAGTPPTLAAVRSAVGGGSYTTINEALKEWKAKQQAAVMPLREPAPEGISKRLDEVGAEVWAIALELANARLTSEREALEATRQQLETAQQEATELADQLSAELEALQAQHQQATQDLQTAITTLEQLRQENATLSRQLATTEARAEETTKRADDLRAELQHAHAENTAQRQRHNAETQALQAQLNTTEKALQTEVSNGVRLTLELTHAQMQASTAQQQQQTQQERHADEIRLMGERLTTAQAEREQALQAASATREDAAGMRGELEALRVQNAALLNTLKPVPAAPTVPPLDQMNLGL
SIO_010081: HMY34_RS19950
subclass of: SO_0000673
so part of: HMY34_RS19950
location: 7540..8487
location: region:7540-8487:1
so has part: feature:7540-8487:1:exon

WP_202719310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7540-8487:1:exon

HMY34_RS19955
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19955
old locus tag: HMY34_19910
so part of: sequence
location: complement(8824..9318)
location: region:8824-9318:-1
so has part: feature:8824-9318:-1:exon
subclass of: SO_0000010

position:8824:-1
position: 8824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9318:-1
position: 9318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8824-9318:-1:exon

HMY34_RS19955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19955
old locus tag: HMY34_19910
inference: COORDINATES: protein motif:HMM:NF017386.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: siphovirus Gp157 family protein
translation: MKLYEISQNYLSALEFFGDVDNDMSLDTALDTFEAIEGDFEQKVISVAAYAKQLDAEADAIKAAMERMEKRRKAIENRANYLKDYTKVCMGQMGKTKIACPWFAVSIQKNPPSVTVYDEAALPFEYVAEVTTTKVDKAAIKAALSAGVAVSGAKLSNGTRLVIK
SIO_010081: HMY34_RS19955
subclass of: SO_0000673
so part of: HMY34_RS19955
location: complement(8824..9318)
location: region:8824-9318:-1
so has part: feature:8824-9318:-1:exon

WP_202719311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8824-9318:-1:exon

HMY34_RS19960
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19960
old locus tag: HMY34_19915
so part of: sequence
location: complement(9305..10123)
location: region:9305-10123:-1
so has part: feature:9305-10123:-1:exon
subclass of: SO_0000010

position:9305:-1
position: 9305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10123:-1
position: 10123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9305-10123:-1:exon

HMY34_RS19960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19960
old locus tag: HMY34_19915
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAAKKQVNDNTNALTVTTAAAPPAPVSLGILQGTSPAALMSGASEMAGELAKMIEAQRLWDPINGKKYVKVEGWTTLAVMMGVVAREVQTTEADGIYTAVVELVRMSDGACISRASAECGEEKPWNARARYARRSMAQTRATGKACRLAFSWVMSLAGYEPTPFEEMPNDPVVSAVPQPIRPPVNDNTRPSVADSRITPQQRRMLEGKIAESGLERERIKTWVERSWQVDHFNALTNDQLNKLLIKIGQWAAAEKALAQAKVVQEVSDETV
SIO_010081: HMY34_RS19960
subclass of: SO_0000673
so part of: HMY34_RS19960
location: complement(9305..10123)
location: region:9305-10123:-1
so has part: feature:9305-10123:-1:exon

WP_202719312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9305-10123:-1:exon

HMY34_RS19965
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19965
old locus tag: HMY34_19920
so part of: sequence
location: complement(10211..10579)
location: region:10211-10579:-1
so has part: feature:10211-10579:-1:exon
subclass of: SO_0000010

position:10211:-1
position: 10211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10579:-1
position: 10579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10211-10579:-1:exon

HMY34_RS19965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19965
old locus tag: HMY34_19920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITCKNNVDPVIHDLNKYLIDMENHDIKLEHFRALAEVDFQKLNYLEIIEYDDDLTSLERLFECLSNNDFEKSKKAMLSFIESVKEVFIQDRMNYFERKDFLESQNDDMEQYYLKKFNAEWC
SIO_010081: HMY34_RS19965
subclass of: SO_0000673
so part of: HMY34_RS19965
location: complement(10211..10579)
location: region:10211-10579:-1
so has part: feature:10211-10579:-1:exon

WP_202719313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10211-10579:-1:exon

HMY34_RS19970
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19970
old locus tag: HMY34_19925
so part of: sequence
location: complement(10924..11319)
location: region:10924-11319:-1
so has part: feature:10924-11319:-1:exon
subclass of: SO_0000010

position:10924:-1
position: 10924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11319:-1
position: 11319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10924-11319:-1:exon

HMY34_RS19970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19970
old locus tag: HMY34_19925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRCLMFSSGSHSLVSSRSLVCPPRGFSPLPLSAPWFRAVVGHALAFGAARWRLRRSARSFSGAVVVVGFADQSAASTFAAAFSGWCGVSLAVRRFGAALWGVSVPVAAPPSARSLSLPVPALPASVAWVSG
SIO_010081: HMY34_RS19970
subclass of: SO_0000673
so part of: HMY34_RS19970
location: complement(10924..11319)
location: region:10924-11319:-1
so has part: feature:10924-11319:-1:exon

WP_202719314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10924-11319:-1:exon

HMY34_RS19975
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19975
old locus tag: HMY34_19930
so part of: sequence
location: complement(11386..11538)
location: region:11386-11538:-1
so has part: feature:11386-11538:-1:exon
subclass of: SO_0000010

position:11386:-1
position: 11386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11538:-1
position: 11538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11386-11538:-1:exon

HMY34_RS19975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19975
old locus tag: HMY34_19930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRILPFRGGCLRSSAIRIFERVFLVPPFNRRLSPAGASDNRQLTGWGLAA
SIO_010081: HMY34_RS19975
subclass of: SO_0000673
so part of: HMY34_RS19975
location: complement(11386..11538)
location: region:11386-11538:-1
so has part: feature:11386-11538:-1:exon

WP_202719315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11386-11538:-1:exon

HMY34_RS19980
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19980
old locus tag: HMY34_19935
so part of: sequence
location: 11639..11803
location: region:11639-11803:1
so has part: feature:11639-11803:1:exon
subclass of: SO_0000010

position:11639:1
position: 11639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11803:1
position: 11803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639-11803:1:exon

HMY34_RS19980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19980
old locus tag: HMY34_19935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRHTPRSDLEGGAAQHLSKLIHEHADIVEGLGRCSPARSHRRSEAVNEVRSRAH
SIO_010081: HMY34_RS19980
subclass of: SO_0000673
so part of: HMY34_RS19980
location: 11639..11803
location: region:11639-11803:1
so has part: feature:11639-11803:1:exon

WP_202719316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11639-11803:1:exon

HMY34_RS19985
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19985
old locus tag: HMY34_19940
so part of: sequence
location: complement(11981..12277)
location: region:11981-12277:-1
so has part: feature:11981-12277:-1:exon
subclass of: SO_0000010

position:11981:-1
position: 11981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12277:-1
position: 12277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11981-12277:-1:exon

HMY34_RS19985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19985
old locus tag: HMY34_19940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPNFKASLDELFQLVINTEPTDWIDWEGGDCPVHKGTPVKVRLRGGSELPTMLAGNLPVDWYHYRDSIFGDEGDVDTYDDRTEIYRNDDIIAYKVSA
SIO_010081: HMY34_RS19985
subclass of: SO_0000673
so part of: HMY34_RS19985
location: complement(11981..12277)
location: region:11981-12277:-1
so has part: feature:11981-12277:-1:exon

WP_202719317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11981-12277:-1:exon

HMY34_RS19990
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19990
old locus tag: HMY34_19945
so part of: sequence
location: complement(12297..12596)
location: region:12297-12596:-1
so has part: feature:12297-12596:-1:exon
subclass of: SO_0000010

position:12297:-1
position: 12297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12596:-1
position: 12596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12297-12596:-1:exon

HMY34_RS19990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19990
old locus tag: HMY34_19945
inference: COORDINATES: protein motif:HMM:NF027824.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrfB-related DNA-binding protein
translation: MNLAEFMEAAATTRMTQHVKDGARMVLVDGMKAVDAAKLLDMTPQQLREAVKRIKAAHKAGQGMPEGWECVTVCVPPELVETVREVGRQAKRDAGLSVD
SIO_010081: HMY34_RS19990
subclass of: SO_0000673
so part of: HMY34_RS19990
location: complement(12297..12596)
location: region:12297-12596:-1
so has part: feature:12297-12596:-1:exon

WP_202719318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12297-12596:-1:exon

HMY34_RS19995
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS19995
old locus tag: HMY34_19950
so part of: sequence
location: complement(12857..13870)
location: region:12857-13870:-1
so has part: feature:12857-13870:-1:exon
subclass of: SO_0000010

position:12857:-1
position: 12857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13870:-1
position: 13870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12857-13870:-1:exon

HMY34_RS19995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS19995
old locus tag: HMY34_19950
inference: COORDINATES: protein motif:HMM:NF019844.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing protein
translation: MNKKLTIAVALTALAASSFTFAATDQVTAVIKEIGEVSESGDGFTFKTTDGNEYYIYAAEDFVKGGEYLTESEKKGTPVCLKLNPEHGMGDIAAVSKGACSSGKSTGDWYMSTAEPALTVRDSAGVTGKKIGSVPVNGKVKVVEKTGVQDSISGKSGEWVKIEWDGSFGYAFDSFLVPVDGTKKDTQTESKSSNNGGVEEGLINALRLKSGGNERMADSGKAIQAYMKAGLLDKKPAGRSDYTDFYILKQPASFMGHKLVVIEEEYMSEYIGCCVSPGAGVIVEAAASVENLAAFASKNGCSVEEHVNLEQELSGLDVKLPTGDFTSLSCRERDISQ
SIO_010081: HMY34_RS19995
subclass of: SO_0000673
so part of: HMY34_RS19995
location: complement(12857..13870)
location: region:12857-13870:-1
so has part: feature:12857-13870:-1:exon

WP_202719319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12857-13870:-1:exon

HMY34_RS20000
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20000
old locus tag: HMY34_19955
so part of: sequence
location: complement(13913..14164)
location: region:13913-14164:-1
so has part: feature:13913-14164:-1:exon
subclass of: SO_0000010

position:13913:-1
position: 13913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14164:-1
position: 14164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13913-14164:-1:exon

HMY34_RS20000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20000
old locus tag: HMY34_19955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEHDTETLWVAGWMWGKYPEHAPSKAHYLPQDETEAAEWLEGFRWGTTEACQFHRLWEWLHETLVGHDTTIRLVNKVAGNAG
SIO_010081: HMY34_RS20000
subclass of: SO_0000673
so part of: HMY34_RS20000
location: complement(13913..14164)
location: region:13913-14164:-1
so has part: feature:13913-14164:-1:exon

WP_202719290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13913-14164:-1:exon

HMY34_RS20005
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20005
old locus tag: HMY34_19960
so part of: sequence
location: complement(14145..14339)
location: region:14145-14339:-1
so has part: feature:14145-14339:-1:exon
subclass of: SO_0000010

position:14145:-1
position: 14145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14339:-1
position: 14339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14145-14339:-1:exon

HMY34_RS20005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20005
old locus tag: HMY34_19960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004629956.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDTITNDPSASHWLKRAVTELWERDVVDALNDLDVLREVLEAKHHAHVLTLKRMVTSDDGTRH
SIO_010081: HMY34_RS20005
subclass of: SO_0000673
so part of: HMY34_RS20005
location: complement(14145..14339)
location: region:14145-14339:-1
so has part: feature:14145-14339:-1:exon

WP_202719291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14145-14339:-1:exon

HMY34_RS20010
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20010
old locus tag: HMY34_19965
so part of: sequence
location: complement(14393..15019)
location: region:14393-15019:-1
so has part: feature:14393-15019:-1:exon
subclass of: SO_0000010

position:14393:-1
position: 14393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15019:-1
position: 15019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14393-15019:-1:exon

HMY34_RS20010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20010
old locus tag: HMY34_19965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011074453.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAIYAYLRVSTDAQDVDNQKHGILEYANKHGLTKMTFVEDTVSGQKKWQLRKLGEMVRNAEKGDVLIFAEISRMARSTLQVLEIMEHCTKAGIEVHVTKQNMVLDQSMSSRITVTVLGMAAEIEREFISIRTKEALAKRKAAGLPMGRPVGQAETLKLDAKAAEINDLIAKGVNKRSIAKVVGCSHTALYDWLDRRGIRERGTPRGQK
SIO_010081: HMY34_RS20010
subclass of: SO_0000673
so part of: HMY34_RS20010
location: complement(14393..15019)
location: region:14393-15019:-1
so has part: feature:14393-15019:-1:exon

WP_202719292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14393-15019:-1:exon

HMY34_RS20015
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20015
old locus tag: HMY34_19970
so part of: sequence
location: 15562..16074
location: region:15562-16074:1
so has part: feature:15562-16074:1:exon
subclass of: SO_0000010

position:15562:1
position: 15562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16074:1
position: 16074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15562-16074:1:exon

HMY34_RS20015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20015
old locus tag: HMY34_19970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTINFTKEAFVSFLGSVYMPNPDDSDPYDPWDPIGPVANDYFSRFLLSKLGNFRPPPQPYRIVASSQALIVRAVEQFQLAETIGSSEKAGDAIGGYLFDVIDDWCGTRPPKWPFPRRFLVDELRPVDLLVAGAEFQKAAMLDNPLQKHFAAAADKLFEVGLKQLEGGNA
SIO_010081: HMY34_RS20015
subclass of: SO_0000673
so part of: HMY34_RS20015
location: 15562..16074
location: region:15562-16074:1
so has part: feature:15562-16074:1:exon

WP_202719293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15562-16074:1:exon

HMY34_RS20020
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20020
old locus tag: HMY34_19975
so part of: sequence
location: 16348..17031
location: region:16348-17031:1
so has part: feature:16348-17031:1:exon
subclass of: SO_0000010

position:16348:1
position: 16348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17031:1
position: 17031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16348-17031:1:exon

HMY34_RS20020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20020
old locus tag: HMY34_19975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYIANPALVNNRHYLQMPPLSKHKAVMFLICFFVGLMSLLWLKPIHAQEGEPIAIVGHGGFFDQKGTQIPLSLSFADKTQIWYRDQLMKNLSSEQKSAFAAYEKRLYGGMNAKGQNKLIIQHQAIEWLLANAKLNDSQSQMAGKLSALRYAMNWKLPEQGSLKVVEKRETFTLPPNILKHLESLPFRPASDIQLLSATINSGQAYIDECRAAGVPIPQQSTGWILPG
SIO_010081: HMY34_RS20020
subclass of: SO_0000673
so part of: HMY34_RS20020
location: 16348..17031
location: region:16348-17031:1
so has part: feature:16348-17031:1:exon

WP_202719294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16348-17031:1:exon

HMY34_RS20025
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20025
old locus tag: HMY34_19980
so part of: sequence
location: 17199..18638
location: region:17199-18638:1
so has part: feature:17199-18638:1:exon
subclass of: SO_0000010

position:17199:1
position: 17199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18638:1
position: 18638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17199-18638:1:exon

HMY34_RS20025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20025
old locus tag: HMY34_19980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKQSSKVCFWDNQMMNVATGRSEGFPFAAGEQIPIGVPNTLGGKYQAGGKEIENGSGGRCTSCHLGENPFLVHPKSNLGVIGPWENLSGAPQNLPTMPVNRYDPIVASSWQQNRLSHAGLPAQCISCHIKGGSAGRLPHLSNEIGTYCNTILRNALDRTMPPGSPVGSESALGRDLLAWCNLPPNASVADSGDPHITTTNGINYDFQAAGEFTVLKNSDTGFELQTRQSPVLTLFTPLKNSYTELSSCVSLNTAAALRIGKHRITYQLADGKQLELRVDGELIKAENGADLGDGNVINKANKEGEVDIRLADGSRVVIIPTFWASQGYWYLDVRVLNTSAREGVMGPVLVNDWLPRAPDGTSFGPKPTSLLDRDVILNHKFADAWRVNDQNSLFDYATNTSTKDFTDINWPPESGKACNSTTVGGIIPVVKEPRPDLAKKACGSIKNKAIFNNCIFDVTVLGDTAAAKGHRRADNLNQ
SIO_010081: HMY34_RS20025
subclass of: SO_0000673
so part of: HMY34_RS20025
location: 17199..18638
location: region:17199-18638:1
so has part: feature:17199-18638:1:exon

WP_202719295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17199-18638:1:exon

HMY34_RS20030
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20030
old locus tag: HMY34_19985
so part of: sequence
location: complement(18688..19977)
location: region:18688-19977:-1
so has part: feature:18688-19977:-1:exon
subclass of: SO_0000010

position:18688:-1
position: 18688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19977:-1
position: 19977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18688-19977:-1:exon

HMY34_RS20030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20030
old locus tag: HMY34_19985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPRSIHEPVRLENERTYLQLKPELRHTLYIAAWAITAVMGVAGVLTYYSSNPSALGAVMAFLLFLGFMLTMKSASALLFDSQMPGILRFLALLCIIAVVVIDVFAFSHEKQTGVMERIESAKAVDAGYASKAQQLSQLQAELAACPPNHYTKCRTPLLQAIQSAQNAPDTLRFDAQNAGENRYWLALAAWYNDGKLQENHVDAGTIALYVFAGMGLAGSLFAVFAFGVHGASVSRVEYQRPAPSSEAERIHERNERNHERNERIQHTYRHRLEAAGVTVPPADTVLDQPISSPETSERNERIHERIHERTSTLKNASDTLTDTLSHTPDTLTDTLKAEAEEGGDTLPSEGDTYEDWKQAVVNGQCETIVRDMRLWLQDVGAVEPGKTKQAQLVAEFYLMEAEAEGFVREIPNWVSGMRRKYEWTGQGA
SIO_010081: HMY34_RS20030
subclass of: SO_0000673
so part of: HMY34_RS20030
location: complement(18688..19977)
location: region:18688-19977:-1
so has part: feature:18688-19977:-1:exon

WP_202719296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18688-19977:-1:exon

HMY34_RS20035
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20035
old locus tag: HMY34_19990
so part of: sequence
location: complement(20067..21332)
location: region:20067-21332:-1
so has part: feature:20067-21332:-1:exon
subclass of: SO_0000010

position:20067:-1
position: 20067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21332:-1
position: 21332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20067-21332:-1:exon

HMY34_RS20035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20035
old locus tag: HMY34_19990
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MTKVLPKSKRKLPPSTAVVTQSNELVSARYALPLGEMRLLFTVISKVQPGDTKLTVYRIPIGEFADFLGVARGSAYTEMKNITKSIVTRYVEIKSPGRLVQTTWVTQAEYIDGTGTVDVQLSESMIPHLLQLKNGNFTQCKLLMLLSFKSQYTLRLYMLLKQKRDHNPYAKTYDFELSDLRKILGVSVEYIPRADKFSKAQEAMELYPEYKVFKRCVLETARKELDTKADIGFNYDEIRHGRPVTALSFRVFAINRPGLLPALAAEEQLHLSLPASTDLDLVTTLLSFVPDQHRAKKGVRATIESAEKQHGFDYVKRNILYSNAHASKNYASYLNGALAIDYGHDWEIEQQQAAKAAETAKTPTVTLLELKALADDICALQRNSKLTNSPELWQQAEVLKAEYTRKREIYDEENTEEEEAS
SIO_010081: HMY34_RS20035
subclass of: SO_0000673
so part of: HMY34_RS20035
location: complement(20067..21332)
location: region:20067-21332:-1
so has part: feature:20067-21332:-1:exon

WP_202719297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20067-21332:-1:exon

HMY34_RS20040
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20040
old locus tag: HMY34_19995
so part of: sequence
location: 22109..22831
location: region:22109-22831:1
so has part: feature:22109-22831:1:exon
subclass of: SO_0000010

position:22109:1
position: 22109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22831:1
position: 22831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22109-22831:1:exon

HMY34_RS20040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20040
old locus tag: HMY34_19995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEFLKIRNSNSQVRADGTKFAVPLFVTKNKKYGTVANEEPISVKRDIMVTGAHDSGKTRWLTRMYEQSNRIWTKSKSPAIWLSALRPLGSWSDCLQIVEWWNEKVAADPVNYEPWAKVPAWKRQELIPDYLKDTGSVLFIDDAHKLTGRKLQLARMCVLNAKICVISTTEEQRIAPNLRSALLKRDPQIFRLDSEVAYDATKPLIWLIALAALGAGWWEISLVLGGMQALASGRRSSKQD
SIO_010081: HMY34_RS20040
subclass of: SO_0000673
so part of: HMY34_RS20040
location: 22109..22831
location: region:22109-22831:1
so has part: feature:22109-22831:1:exon

WP_202719298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22109-22831:1:exon

HMY34_RS20045
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20045
old locus tag: HMY34_20000
so part of: sequence
location: 22773..23666
location: region:22773-23666:1
so has part: feature:22773-23666:1:exon
subclass of: SO_0000010

position:22773:1
position: 22773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23666:1
position: 23666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22773-23666:1:exon

HMY34_RS20045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20045
old locus tag: HMY34_20000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSVVCKLSQAVGAPANKINLLTSVLIAMLLTPISASAETDSDYEATKAETLRLAGITASAGTENVDTEVSNKTASAWWPWKTGELEKPPEPKIYQTPTMAGDGLDYHDKPAALVQAPALDADAIFKTVLRCYPEKSKFDIDVDLRASIRSSDVLDLEDTATGLGKSYVGIVAKMPLYSGKELDREKEREYMRRKDTAKTVADFVTAIAGRNHAVRELALYRSLEARSAVRVQQGITEASEQVGYLEKVASSQNKLISEEAKIMESRLMLAGMCDPKNAERIGGWLRKVSAVQAGDK
SIO_010081: HMY34_RS20045
subclass of: SO_0000673
so part of: HMY34_RS20045
location: 22773..23666
location: region:22773-23666:1
so has part: feature:22773-23666:1:exon

WP_202719299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22773-23666:1:exon

HMY34_RS20050
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20050
old locus tag: HMY34_20005
so part of: sequence
location: 23663..24184
location: region:23663-24184:1
so has part: feature:23663-24184:1:exon
subclass of: SO_0000010

position:23663:1
position: 23663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24184:1
position: 24184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23663-24184:1:exon

HMY34_RS20050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20050
old locus tag: HMY34_20005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017097178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MKWFNHLLIAGSTCAVVAPTLVPVALLGSTAPDWLEWVSGALGHKVKHRTTTHVVTYWIAAMLFFGFLWDFHGIGMAFAYGGFTHVFADSLTIMGVPLLPGSDRRTNLFGGRLRTGGMGEFAVAGGIAAVCFFFASHLHTGSDFFPFFYEWGNLYQEGVIDAKEWKDNRLNFI
SIO_010081: HMY34_RS20050
subclass of: SO_0000673
so part of: HMY34_RS20050
location: 23663..24184
location: region:23663-24184:1
so has part: feature:23663-24184:1:exon

WP_202719300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23663-24184:1:exon

HMY34_RS20055
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20055
old locus tag: HMY34_20010
so part of: sequence
location: complement(24225..25211)
location: region:24225-25211:-1
so has part: feature:24225-25211:-1:exon
subclass of: SO_0000010

position:24225:-1
position: 24225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25211:-1
position: 25211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24225-25211:-1:exon

HMY34_RS20055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20055
old locus tag: HMY34_20010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011077911.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease
translation: MKRLFVLFLIAILSPSYADSPTEFDDAKVIAKESIYHDKHQTFYCGCDFQFTGKSGGRIELESCGYKPRSAGNLNRAERLEWEHVVPASNFGKARQCWQNGGRENCQSTDPVFNVMESNLHNLVPEIGELNGDRSNYNYGIVQKDADYGACNFKVDFKGRTAEPDDSVKGAVARIYFYMHDRYDMRMSPQQQRLLMVWAEKYPPSAWEIERDKRIAKVMGHNNAFVTGERKWTLNHKNSKDGVVAELKEPKQVKTKLAANEPKAITNTPKIVLASASTGAIIGNSNSKIYHLPVGCPSYDKVSPQNRVEFGSESEAESAGYRIAKNCK
SIO_010081: HMY34_RS20055
subclass of: SO_0000673
so part of: HMY34_RS20055
location: complement(24225..25211)
location: region:24225-25211:-1
so has part: feature:24225-25211:-1:exon

WP_202719301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24225-25211:-1:exon

HMY34_RS20060
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20060
old locus tag: HMY34_20015
so part of: sequence
location: complement(25579..25902)
location: region:25579-25902:-1
so has part: feature:25579-25902:-1:exon
subclass of: SO_0000010

position:25579:-1
position: 25579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25902:-1
position: 25902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25579-25902:-1:exon

HMY34_RS20060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20060
old locus tag: HMY34_20015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKTKKQEIIGMTGNKKKAMAGLDALKHLATPPTSPAPPQPVAPEANGKSDKVVFSLHLPEAAHAKLRELSFHERQSMTKLILEGVDLLFAKRGISPIAELHKDGIK
SIO_010081: HMY34_RS20060
subclass of: SO_0000673
so part of: HMY34_RS20060
location: complement(25579..25902)
location: region:25579-25902:-1
so has part: feature:25579-25902:-1:exon

WP_202719302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25579-25902:-1:exon

HMY34_RS20065
type: Gene
subclass of: SO_0000704
RO_0002162: 2735563
locus tag: HMY34_RS20065
old locus tag: HMY34_20020
so part of: sequence
location: complement(25866..26492)
location: region:25866-26492:-1
so has part: feature:25866-26492:-1:exon
subclass of: SO_0000010

position:25866:-1
position: 25866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26492:-1
position: 26492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25866-26492:-1:exon

HMY34_RS20065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735563
locus tag: HMY34_RS20065
old locus tag: HMY34_20020
inference: COORDINATES: protein motif:HMM:NF025001.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MQVWTFTTQKGGAGKTTLATNLAVAATQAGEKVLLIDTDPQESAVKWWQRRDAEAPQLIKLKPSEVGEGIKLAQSQGFTLVIIDTAGRESVEDNQAVLQATFCLVPCQPSIADIEAVYPTVDMLKRTNRNYAFILTRCPSVGQDQISAREGLTGLGLVAKPFTIERKAYKLAFATGEGVTEYDTKDKAADEVAELYQWIKQKSRRLSA
SIO_010081: HMY34_RS20065
subclass of: SO_0000673
so part of: HMY34_RS20065
location: complement(25866..26492)
location: region:25866-26492:-1
so has part: feature:25866-26492:-1:exon

WP_202719303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25866-26492:-1:exon