Mariniplasma anaerobium strain Mahy22 plasmid pAa22_1, complete sequence.
type: Entry
definition: Mariniplasma anaerobium strain Mahy22 plasmid pAa22_1, complete sequence.
sequence version: NZ_AP024413.1
sequence date: 2022-12-08
sequence: sequence
division: CON
label: NZ_AP024413.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00227922
keyword: RefSeq
source: Mariniplasma anaerobium
organism: Mariniplasma anaerobium
taxonomy: Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Mariniplasma.
reference: 1
references: 34874244
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP024413.1.\nAnnotated at DFAST https://dfast.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.7\nGenome Coverage :: 711x\nSequencing Technology :: DNBSEQ; GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 08:27:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,804\nCDSs (total) :: 1,759\nGenes (coding) :: 1,750\nCDSs (with protein) :: 1,750\nGenes (RNA) :: 45\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 36\nncRNAs :: 3\nPseudo Genes (total) :: 9\nCDSs (without protein) :: 9\nPseudo Genes (ambiguous residues) :: 0 of 9\nPseudo Genes (frameshifted) :: 1 of 9\nPseudo Genes (incomplete) :: 6 of 9\nPseudo Genes (internal stop) :: 2 of 9\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 12782
topology: circular
so has quality: SO_0000988
location: 1..12782
location: region:1-12782:1
RO_0002162: 2735436

NZ_AP024413
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00227922
type: BioSample
SIO_000068: biosample

1
title: Mariniplasma anaerobium gen. nov., sp. nov., a novel anaerobic marine mollicute, and proposal of three novel genera to reclassify members of Acholeplasma clusters II-IV
author: Watanabe, M.
author: Kojima, H.
author: Okano, K.
author: Fukui, M.
journal: Int J Syst Evol Microbiol 71 (12) (2021)
pubmed: 34874244
comments: DOI:10.1099/ijsem.0.005138

34874244
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Watanabe, M.
author: Kojima, H.
author: Fukui, M.
journal: Submitted (22-JAN-2021) Contact:Miho Watanabe Akita Prefectural University, Faculty of Bioresource Sciences, Department of Biological Environment; 241-438 Kaidobata-Nishi, Nakano, Shimoshinjo, Akita 010-0195, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12782:1
position: 12782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12782:1:source
so part of: sequence
organism: Mariniplasma anaerobium
mol type: genomic DNA
strain: Mahy22
isolation source: lake water
culture collection: NBRC:113541
type material: type strain of Mariniplasma anaerobium
plasmid: pAa22_1
country: Japan: Hokkaido, Lake Harutori
collection date: 2013-01-31

2735436
type: Taxonomy
SIO_000068: taxonomy

MPAN_RS08965
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
locus tag: MPAN_RS08965
so part of: sequence
location: complement(join(11835..12782,1..402))
location: region:1-12782:-1
so has part: feature:1-402:-1:exon
so has part: feature:11835-12782:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12782:-1
position: 12782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-402:-1:exon

position:402:-1
position: 402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11835-12782:-1:exon

position:11835:-1
position: 11835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPAN_RS08965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
locus tag: MPAN_RS08965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MLNRDQKNNTKNLQVVDIDSLVPQNHLVRKVDKVMQFDFIYDIVEHLYSDDMGRPSIDPVVLFKIVFIQYLFNIRSMRRTIEEIEVNVAYRWFLGYDFSDDIPHFSTFGKNYVRRFKDTDIFEEIFNTILYQAMNLKLVKMDNIFVDSTHIKAYANKRRVNDILINDSTHKYVKQLHEEINELRLKEGKKIIDYDSPKKAIISLTDPDCGMFHKGEKERQLAYSNQVISDENGWVLSSEMFAGNLHDSITGLDTVVNYLDTHKEVKVAVMDSGYDNPILLNEIYKRKVLPVLPYKRPKGKDGSIGLNGERHLTKNRFDYIEMHDYYICPNEKILTYRGTNKLGYREYKTRVKDCIECPFKAQCTNQKTRSLTRHQLEYVNPLIKETRLSEIGRELYPKRKSSVERVFGISKMNHCLGVTYLRGRQKNEDRSFMIFSMYNLKKLAALMWT
SIO_010081: MPAN_RS08965
subclass of: SO_0000673
so part of: MPAN_RS08965
location: complement(join(11835..12782,1..402))
location: region:1-12782:-1
so has part: feature:1-402:-1:exon
so has part: feature:11835-12782:-1:exon

WP_231756733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11835-12782:-1:exon

MPAN_RS08970
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
locus tag: MPAN_RS08970
old locus tag: MPAN_017710
so part of: sequence
location: complement(669..1514)
location: region:669-1514:-1
so has part: feature:669-1514:-1:exon
subclass of: SO_0000010

position:669:-1
position: 669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514:-1
position: 1514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669-1514:-1:exon

MPAN_RS08970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
locus tag: MPAN_RS08970
old locus tag: MPAN_017710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIGNLITSFVLSLASYFIISHFIYRLSGRKDWAFFFLGIIFLSSLFDFLPYAFGNYAFPIILLVFVSRVLPVMLAAALFTRFTGGLSKKKIRIKRSHFKEPNEDIYTTSYIIKIVYIMFIIAILISVLSYFFMDGALQYVLFAISLFVVIYGIVKLYQLRFFKNDKVVIIIGKEKENVYMKTIDPKLTKITIKDIYQNENYLIDKFATIQLYEENHFKEKHYLYWIATSKAFEIEDLSFIKTTLGYEEHIMGLMKYHDAIIKLNYVKNRYEVLKAVKFRK
SIO_010081: MPAN_RS08970
subclass of: SO_0000673
so part of: MPAN_RS08970
location: complement(669..1514)
location: region:669-1514:-1
so has part: feature:669-1514:-1:exon

WP_176240154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:669-1514:-1:exon

MPAN_RS08975
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
locus tag: MPAN_RS08975
old locus tag: MPAN_017720
so part of: sequence
location: 1760..1981
location: region:1760-1981:1
so has part: feature:1760-1981:1:exon
subclass of: SO_0000010

position:1760:1
position: 1760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1981:1
position: 1981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1760-1981:1:exon

MPAN_RS08975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
locus tag: MPAN_RS08975
old locus tag: MPAN_017720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017380414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YneF family protein
translation: MNIAIWLFVVLLVVAVLLGAVIGFFAARKWFKKYLEKNPPVNEQMIREMMRQMGRTPSEKQVRQILSSMNQYK
SIO_010081: MPAN_RS08975
subclass of: SO_0000673
so part of: MPAN_RS08975
location: 1760..1981
location: region:1760-1981:1
so has part: feature:1760-1981:1:exon

WP_176240153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1760-1981:1:exon

MPAN_RS08980
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
gene: plsY
locus tag: MPAN_RS08980
old locus tag: MPAN_017730
so part of: sequence
location: complement(2030..2674)
location: region:2030-2674:-1
so has part: feature:2030-2674:-1:exon
subclass of: SO_0000010

position:2030:-1
position: 2030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2674:-1
position: 2674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2030-2674:-1:exon

MPAN_RS08980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
gene: plsY
locus tag: MPAN_RS08980
old locus tag: MPAN_017730
EC number: 2.3.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012656915.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO process: GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate 1-O-acyltransferase PlsY
translation: MTYVYIGLLMLLSYLIGSIPSGLIIGKVFKKIDIREHGSKSTGATNTIRVLGFKFGIFAFAFDVLKGAFVIALVFLMKDQSLYIVSQYNITISSIYGLAAVIGHVFPVYIKFKGGKAVATSAGMILAIEPWVALAIIVVFLTVFLTTRYVSLASTACAVGVLVFFFIRIFFEHPFYNFATRIMDLTIITILASIIFVRHKTNYKRLREGTESKL
SIO_010081: MPAN_RS08980
subclass of: SO_0000673
so part of: MPAN_RS08980
location: complement(2030..2674)
location: region:2030-2674:-1
so has part: feature:2030-2674:-1:exon

WP_176240152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2030-2674:-1:exon

MPAN_RS08985
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
gene: parE
locus tag: MPAN_RS08985
old locus tag: MPAN_017740
so part of: sequence
location: 2821..4773
location: region:2821-4773:1
so has part: feature:2821-4773:1:exon
subclass of: SO_0000010

position:2821:1
position: 2821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4773:1
position: 4773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2821-4773:1:exon

MPAN_RS08985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
gene: parE
locus tag: MPAN_RS08985
old locus tag: MPAN_017740
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012242332.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit B
translation: MIKEYDEKSIQILEGLEAVRKRPGMYIGSTDQRGLHHLVWEIVDNSIDEALSGYGSEITCIIKADNSIEVSDNGRGMPYKMHTSGRATTEIIFTVLHAGGKFSNESGYKVSGGLHGVGSSVVNALSQFLEVTVYRDKGIWFQRFSNGGKDISKVERLGDTKKTGTTVYFKPDPKIFSSTLFSYDLIKERLREQAFLIKGLKINLIDQRNNQKESFKYEDGIKAYVEFLNKDRKVVNDTYVIESAYHLEKQKKKTIEVDIAFQFTHGYIESIFSFVNNVRTKDGGTHETGFKSALTRSINDYARKYNIIKDKDSNLDGSDIREGLTAVISLRIPEDVLEFEGQTKGKLGTPEARNATDSVVYENMSTYLEEHKTVASSIINRATSAQKAREAARKAREEARNGKTKNKKEITLSGKLAPAQSKDKSKNELFLVEGDSAGGSAKQGRNRKHQAILPLRGKVINTEKASLDAILRNEEIATMIHTIGADFGPDFDIKKCNYQKVIIMTDADTDGAHIQVLLLTFFFRYMRPLIDEGRLYIAQPPLYKVTVKKGRKEESNYAWSDEELKALIDGQAATIQRYKGLGEMNAPQLWDTTMNPEHRSLIQVTIDDLSASDKRVSILMGDQVAPRRQWIEENVDFEISDDFDLELGDK
SIO_010081: MPAN_RS08985
subclass of: SO_0000673
so part of: MPAN_RS08985
location: 2821..4773
location: region:2821-4773:1
so has part: feature:2821-4773:1:exon

WP_176240156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2821-4773:1:exon

MPAN_RS08990
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
gene: parC
locus tag: MPAN_RS08990
old locus tag: MPAN_017750
so part of: sequence
location: 4773..7367
location: region:4773-7367:1
so has part: feature:4773-7367:1:exon
subclass of: SO_0000010

position:7367:1
position: 7367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4773-7367:1:exon

MPAN_RS08990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
gene: parC
locus tag: MPAN_RS08990
old locus tag: MPAN_017750
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012242333.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit A
translation: MSVIKKVNDYVENIIESSVVELFSDRFARYSKYIIQERALPDARDGLKPVQRRILYAMQQLGMFHNKPYKKSARIAGEVMGKYHPHGDSSIYEAMVRLSQDFKMRALLIDMHGNNGSIDGDSAAAMRYTEARLSKAAEALLADIEKRTVPFVPNFDDEELEPTVLPAKFPNLLVNGATGISAGYATKIPPHNFTEVVDATIAYLDNDQITFKEITKYIKGPDFPTGGIVQGKEGILQALETGAGKVMIRAKADIEEISKSQDCIVITEIPYEVNKADLVKAIDVLRIDKKIDDILEVRDESDQQGLRIAIDLKKGADAQLMLNLLYKSTDLQVSYNYNMVAILNHRPVLVGVLPILKAYVDHQKDVITNRSNYELEKAQKRQHIVDGLIKMVSILDGVIKAIRDSQNKQNAKESIMELFGFTDMQAEAIVTLQLYRLSNTDILALEQESDSLGDKIKELDHILSSEHALRRVIKRELIDISKVLGDPRRTQIEEEIETIKIDEKDLISDEKVMIGITKDGYVKRASSRSYQATLSAGLKQDDVLIFEKEVNTLDTLLLFTNLGNYIFLPVYKIDEQKWKDLGVYINNITPIAHDERLIDVLLVNSFKDNDYVLLATKQGMMKQSKLSDFEVTRYYKPMKCMKLSGYDELVSIDYGQKDDIISISKNGYVLRYKTDDLPLYGLQAGGVKGMNIGSQDELVSSLYVRDRDDFIMLTSRGHVIKDIVEELPVYSRNRRGILVIEHLKSNPHECVDAARLSKAQQKENVEVLIVTKNYALKTTVSELKYSGNKFGKKMYDDAELGNGYMIKIEDALEDVDLPKKEKKVINKPKDTIKVVDLLKEEEIMTKDHKKIHLNRFDLFDDNDE
SIO_010081: MPAN_RS08990
subclass of: SO_0000673
so part of: MPAN_RS08990
location: 4773..7367
location: region:4773-7367:1
so has part: feature:4773-7367:1:exon

WP_231756830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4773-7367:1:exon

MPAN_RS08995
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
locus tag: MPAN_RS08995
old locus tag: MPAN_017760
so part of: sequence
location: 7380..9020
location: region:7380-9020:1
so has part: feature:7380-9020:1:exon
subclass of: SO_0000010

position:7380:1
position: 7380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9020:1
position: 9020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7380-9020:1:exon

MPAN_RS08995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
locus tag: MPAN_RS08995
old locus tag: MPAN_017760
inference: COORDINATES: protein motif:HMM:NF012697.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside kinase
translation: MKFIINEKAYMYEQPKTLKEVAIDLKVNQPLAATVNKRLRELNYIPTKDADIEFLSYTNADAIKIYESTLRYVIAMAVHRLYPSAKIRFNYSVSRAMLAVFDSFDGILNQRVLNDIEAEVKKIIDSDFLIERKRISIGEAINIYQKLDMPDKVEILKYRDEDYVNLYECHKYLNYMFGYMLPSTGYLKTFNFILYHPGFLIQYPRAEMDGQIPVFKDEPNFGKALKEITKWGRIIRGNSIPKMNEYAKDYTTSVDFVNMCETKHNHQLNELGDMIESNMDTIRLIGIAGPSSSGKTTFSNRLRIELMTRGLRPVMISIDDYYFGKDRAPKNPDGTPDLEHVEALDIKQFNADMLQLIQGESVTLPHFNFNTGKREKGRTIKISENSPIIIEGIHALNEKMTQSIPKHQKFNIYISPQTQLHIDNHNPISITEIRLLRRIVRDQKYRNSSAIDTMDMWPSVRRGEFKWIYPTQREANYVYNSELTYELAVLKKHAVTQLRAIPKENKHFITANRILKFLKYFKDIDDDIVPCNSLLREFIGGSSFNS
SIO_010081: MPAN_RS08995
subclass of: SO_0000673
so part of: MPAN_RS08995
location: 7380..9020
location: region:7380-9020:1
so has part: feature:7380-9020:1:exon

WP_176240151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7380-9020:1:exon

MPAN_RS09000
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
locus tag: MPAN_RS09000
old locus tag: MPAN_017770
so part of: sequence
location: 9033..10085
location: region:9033-10085:1
so has part: feature:9033-10085:1:exon
subclass of: SO_0000010

position:9033:1
position: 9033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10085:1
position: 10085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9033-10085:1:exon

MPAN_RS09000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
locus tag: MPAN_RS09000
old locus tag: MPAN_017770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKALANIGRIQISNEVMLLLLSLYESKGKSFYYDDLFNRDVQAFEKKTIEINLISIAKHLDLSMTEARIKLFAKKKMVPRTKDEHLLANIKISLLQLQSNPDEFEFLVNEIYNLAKLISKDYEPIVFNTYDKAEDGLLKTKKASKREDLEQLLALFQKSLRSNKHELTQLISNFYVDFMNMNIFTKHNDIIGMIVLYALLLKHFNVFKYVSFYKYFLNIKQTWDQGLITANYYWSSGFAQTDMLNRLLVDLLIKAYEEVDIMSHEYEFEKNLNKSDNIENSILKLQEIFTKEDLRKRHPNVSDATIDRTLKRLKDENKIRPLGKGRGSKWQRIIKGNKKALIEQLSLFGE
SIO_010081: MPAN_RS09000
subclass of: SO_0000673
so part of: MPAN_RS09000
location: 9033..10085
location: region:9033-10085:1
so has part: feature:9033-10085:1:exon

WP_176240150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9033-10085:1:exon

MPAN_RS09005
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
locus tag: MPAN_RS09005
old locus tag: MPAN_017780
so part of: sequence
location: 10210..10716
location: region:10210-10716:1
so has part: feature:10210-10716:1:exon
subclass of: SO_0000010

position:10210:1
position: 10210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10716:1
position: 10716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10210-10716:1:exon

MPAN_RS09005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
locus tag: MPAN_RS09005
old locus tag: MPAN_017780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKYIKSLPVVILFFSILLAAMITLGALQTDNGEVIMNGIKATFGGNVGSIGGFASVDVAFSFINAVAYLAPVILVIILIYTVMSHKTKSPLFVSIAILIIASFVFSFVILLNLGAYTTGTVEVLGIEGTYTYEAAVISTGAILGLIFSAGGALTALIYTVSEFKKLS
SIO_010081: MPAN_RS09005
subclass of: SO_0000673
so part of: MPAN_RS09005
location: 10210..10716
location: region:10210-10716:1
so has part: feature:10210-10716:1:exon

WP_176240149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10210-10716:1:exon

MPAN_RS09010
type: Gene
subclass of: SO_0000704
RO_0002162: 2735436
gene: tsf
locus tag: MPAN_RS09010
old locus tag: MPAN_017790
so part of: sequence
location: 10829..11680
location: region:10829-11680:1
so has part: feature:10829-11680:1:exon
subclass of: SO_0000010

position:10829:1
position: 10829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11680:1
position: 11680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10829-11680:1:exon

MPAN_RS09010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2735436
gene: tsf
locus tag: MPAN_RS09010
old locus tag: MPAN_017790
inference: COORDINATES: protein motif:HMM:TIGR00116.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor Ts
translation: MDIKLLKKLREQTSAGMLECKSALEKFDDDYDQALSHIKSQVKEETTTNRVASKGMCKLEIKDDEAILFEVNAETDFVTKNEHFLSLVDTLASHLIDTNVVNANSALKVLIDGQSVDELIKQKSSIISENAYLRRLYRVKKQEGQGFGSYTHMQGKVVSLVVTDKKNDKIANEIAMQITAASAQYLSLENIDQDTINYEKFMYEKEHNTFNEDDFNQSLKAKTLLSQSYIKDPSISVEAYLKLHDINIIDFFRFELGQGIDNKLNCRLDIDCDNSKITVTPIY
SIO_010081: MPAN_RS09010
subclass of: SO_0000673
so part of: MPAN_RS09010
location: 10829..11680
location: region:10829-11680:1
so has part: feature:10829-11680:1:exon

WP_176240148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10829-11680:1:exon