Alkalicella caledoniensis strain LB2 chromosome, complete genome.
Bacteria; Bacillota; Clostridia; Eubacteriales; Proteinivoraceae; Alkalicella.
Submitted (01-JUL-2020) Microbiologie Environnementale et Biotechnologie (MEB), Mediterranean Institute of Oceanography (MIO), UMR 7294, 163 avenue de Luminy, Marseille 13288, France
REFSEQ INFORMATION: The reference sequence is identical to\nCP058559.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. JUNE-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina HiSeq; Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/06/2023 05:08:21\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,633\nCDSs (total) :: 3,539\nGenes (coding) :: 3,510\nCDSs (with protein) :: 3,510\nGenes (RNA) :: 94\nrRNAs :: 9, 9, 9 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 9, 9 (5S, 16S, 23S)\ntRNAs :: 60\nncRNAs :: 7\nPseudo Genes (total) :: 29\nCDSs (without protein) :: 29\nPseudo Genes (ambiguous residues) :: 0 of 29\nPseudo Genes (frameshifted) :: 11 of 29\nPseudo Genes (incomplete) :: 20 of 29\nPseudo Genes (internal stop) :: 0 of 29\nPseudo Genes (multiple problems) :: 2 of 29\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Alkalicella caledoniensis
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF004863.0
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007064886.1
GO:0010468 - regulation of gene expression [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019851057.1
GO:0016787 - hydrolase activity [Evidence IEA]
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009895591.1
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012063318.1
GO:0005216 - monoatomic ion channel activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF033551.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033675.1
COORDINATES: similar to AA sequence:RefSeq:WP_006521022.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964801.1
COORDINATES: protein motif:HMM:NF015378.2
COORDINATES: similar to AA sequence:RefSeq:WP_014357032.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007937573.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014903250.1
COORDINATES: similar to AA sequence:RefSeq:WP_007782331.1
COORDINATES: similar to AA sequence:RefSeq:WP_240162627.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721626.1
GO:0046872 - metal ion binding [Evidence IEA]
SEC-C metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_002852896.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015393866.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015614435.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008909554.1
COORDINATES: protein motif:HMM:NF024197.2
COORDINATES: similar to AA sequence:RefSeq:WP_009213518.1
COORDINATES: protein motif:HMM:NF033546.1
COORDINATES: protein motif:HMM:NF013921.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018615966.1
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002508789.1
COORDINATES: similar to AA sequence:RefSeq:WP_016205557.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011971513.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:NF021594.2
COORDINATES: similar to AA sequence:RefSeq:WP_011722228.1
COORDINATES: similar to AA sequence:RefSeq:WP_012047778.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012464.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016895.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019155101.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002382861.1
reverse transcriptase domain-containing protein
COORDINATES: protein motif:HMM:NF013661.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan recognition family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012065049.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065050.1
COORDINATES: protein motif:HMM:TIGR01665.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016032 - viral process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017751630.1
COORDINATES: similar to AA sequence:RefSeq:WP_006524516.1
COORDINATES: similar to AA sequence:RefSeq:WP_006524217.1
COORDINATES: similar to AA sequence:RefSeq:WP_006524216.1
COORDINATES: similar to AA sequence:RefSeq:WP_006524521.1
COORDINATES: similar to AA sequence:RefSeq:WP_005211540.1
COORDINATES: similar to AA sequence:RefSeq:WP_003399880.1
COORDINATES: similar to AA sequence:RefSeq:WP_013237043.1
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003495947.1
COORDINATES: similar to AA sequence:RefSeq:WP_008409539.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516023.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020817069.1
COORDINATES: similar to AA sequence:RefSeq:WP_008117766.1
COORDINATES: similar to AA sequence:RefSeq:WP_004070864.1
phage terminase small subunit P27 family
COORDINATES: similar to AA sequence:RefSeq:WP_003495930.1
COORDINATES: similar to AA sequence:RefSeq:WP_006524198.1
COORDINATES: similar to AA sequence:RefSeq:WP_003495927.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838153.1
gamma-glutamylcyclotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011838228.1
COORDINATES: similar to AA sequence:RefSeq:WP_020817078.1
COORDINATES: similar to AA sequence:RefSeq:WP_013237029.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006524191.1
COORDINATES: similar to AA sequence:RefSeq:WP_006521313.1
COORDINATES: similar to AA sequence:RefSeq:WP_009296516.1
COORDINATES: similar to AA sequence:RefSeq:WP_004070887.1
COORDINATES: similar to AA sequence:RefSeq:WP_008117720.1
COORDINATES: similar to AA sequence:RefSeq:WP_004070891.1
COORDINATES: similar to AA sequence:RefSeq:WP_004843283.1
COORDINATES: similar to AA sequence:RefSeq:WP_009266539.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293640.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907752.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012283921.1
COORDINATES: similar to AA sequence:RefSeq:WP_006875157.1
COORDINATES: similar to AA sequence:RefSeq:WP_006520907.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003361842.1
COORDINATES: similar to AA sequence:RefSeq:WP_015757109.1
GO:0003712 - transcription coregulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008516446.1
COORDINATES: similar to AA sequence:RefSeq:WP_005213002.1
COORDINATES: protein motif:HMM:TIGR04416.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: protein motif:HMM:NF012870.2
GO:0015074 - DNA integration [Evidence IEA]
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_016296562.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004060754.1
COORDINATES: similar to AA sequence:RefSeq:WP_016296564.1
COORDINATES: similar to AA sequence:RefSeq:WP_013809526.1
COORDINATES: protein motif:HMM:NF020859.2
Mu transposase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008908767.1
COORDINATES: similar to AA sequence:RefSeq:WP_017208920.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003512907.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_005937751.1
GO:0003824 - catalytic activity [Evidence IEA]
adenylyltransferase/cytidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014793811.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016357.2
GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: protein motif:HMM:NF016800.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_009620843.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014356481.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015759443.1
COORDINATES: protein motif:HMM:TIGR02532.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012160370.1
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: similar to AA sequence:RefSeq:WP_013121515.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062530.1
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_012160078.1
COORDINATES: similar to AA sequence:RefSeq:WP_015521164.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: similar to AA sequence:RefSeq:WP_011590121.1
COORDINATES: similar to AA sequence:RefSeq:WP_008428302.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF024698.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007059584.1
COORDINATES: similar to AA sequence:RefSeq:WP_016281775.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
COORDINATES: protein motif:HMM:NF017011.2
COORDINATES: similar to AA sequence:RefSeq:WP_011879324.1
capsular polysaccharide biosynthesis protein CapF
COORDINATES: similar to AA sequence:RefSeq:WP_008975869.1
COORDINATES: similar to AA sequence:RefSeq:WP_004443648.1
COORDINATES: protein motif:HMM:NF026247.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_000734429.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_014257120.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00350.1
GO:0070726 - cell wall assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158750.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04256.1
COORDINATES: protein motif:HMM:NF009049.0
GO:0008973 - phosphopentomutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003485489.1
COORDINATES: similar to AA sequence:RefSeq:WP_011194693.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF014212.2
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: similar to AA sequence:RefSeq:WP_016207794.1
COORDINATES: similar to AA sequence:RefSeq:WP_007862844.1
COORDINATES: protein motif:HMM:NF013070.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF041241.1
GntR family transcriptional regulator YhfZ
COORDINATES: similar to AA sequence:RefSeq:WP_009905501.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_008515546.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008515548.1
COORDINATES: protein motif:HMM:NF021587.2
COORDINATES: protein motif:HMM:TIGR00229.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF019491.2
COORDINATES: similar to AA sequence:RefSeq:WP_003540319.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021355.2
beta-propeller domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019189430.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011196000.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062837.1
COORDINATES: protein motif:HMM:NF002325.0
GO:0008483 - transaminase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
acetylornithine/succinylornithine family transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_015311347.1
GO:0047200 - tetrahydrodipicolinate N-acetyltransferase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007059910.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_003495615.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007059912.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005807447.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00380
The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF015736.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013670.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017416155.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013120788.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021120.2
YhcN/YlaJ family sporulation lipoprotein
COORDINATES: similar to AA sequence:RefSeq:WP_005812072.1
alpha/beta-type small acid-soluble spore protein
COORDINATES: protein motif:HMM:NF014567.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_014255036.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008983 - protein-glutamate O-methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_012301250.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: similar to AA sequence:RefSeq:WP_013986681.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059154.1
COORDINATES: similar to AA sequence:RefSeq:WP_015756964.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF012301.2
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF025854.2
COORDINATES: protein motif:HMM:NF013126.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014026.2
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025756.2
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF015944.2
GO:0016310 - phosphorylation [Evidence IEA]
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016283726.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_019677984.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_002600607.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF017200.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025156.2
COORDINATES: similar to AA sequence:RefSeq:WP_020376602.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_002569038.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_020492085.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008409735.1
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_011878429.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0006817 - phosphate ion transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF018057.2
COORDINATES: similar to AA sequence:RefSeq:WP_008720810.1
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014827138.1
COORDINATES: similar to AA sequence:RefSeq:WP_016208933.1
COORDINATES: protein motif:HMM:NF027528.2
helicase-associated domain-containing protein
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: similar to AA sequence:RefSeq:WP_039235659.1
COORDINATES: protein motif:HMM:NF016763.2
GO:0005576 - extracellular region [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018590766.1
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_003515596.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063973.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:TIGR00023.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_008908648.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF016354.2
COORDINATES: protein motif:HMM:NF022827.2
COORDINATES: similar to AA sequence:RefSeq:WP_011640745.1
COORDINATES: similar to AA sequence:RefSeq:WP_008517291.1
COORDINATES: protein motif:HMM:NF019097.2
COORDINATES: similar to AA sequence:RefSeq:WP_008517293.1
COORDINATES: protein motif:HMM:TIGR02151.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:NF005208.0
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013986475.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013822927.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019356.2
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017026.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010068.0
heme ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013219.2
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013648.2
ABC transporter substrate-binding protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR00211.2
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014182.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025601.2
COORDINATES: protein motif:HMM:TIGR00613.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006440921.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013121256.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: protein motif:HMM:NF017734.2
COORDINATES: protein motif:HMM:NF013391.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004143 - diacylglycerol kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]; GO:0008654 - phospholipid biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003544273.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: similar to AA sequence:RefSeq:WP_019851218.1
COORDINATES: protein motif:HMM:TIGR02876.1
COORDINATES: protein motif:HMM:TIGR02856.1
GO:0005575 - cellular_component [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159100.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_013121280.1
COORDINATES: similar to AA sequence:RefSeq:WP_011640975.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF013401.2
COORDINATES: similar to AA sequence:RefSeq:WP_002589783.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964599.1
histidine triad nucleotide-binding protein
COORDINATES: protein motif:HMM:TIGR00089.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: protein motif:HMM:NF008692.0
GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: protein motif:HMM:NF018076.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008515321.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013810426.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012283479.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003375371.1
GO:0004175 - endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011878812.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011878813.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0005215 - transporter activity [Evidence IEA]
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: similar to AA sequence:RefSeq:WP_013175019.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: protein motif:HMM:NF019128.2
COORDINATES: protein motif:HMM:NF012602.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004463307.1
COORDINATES: protein motif:HMM:NF015867.2
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003374924.1
COORDINATES: protein motif:HMM:NF012257.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF025217.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063445.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015755.2
COORDINATES: protein motif:HMM:NF000840.1
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003483919.1
GO:0008150 - biological_process [Evidence IEA]
ribosome assembly RNA-binding protein YhbY
COORDINATES: similar to AA sequence:RefSeq:WP_014795453.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF026040.2
COORDINATES: similar to AA sequence:RefSeq:WP_010292658.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_012063435.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00757.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_013121367.1
GO:0008152 - metabolic process [Evidence IEA]
TIGR03960 family B12-binding radical SAM protein
COORDINATES: protein motif:HMM:NF024790.2
COORDINATES: protein motif:HMM:TIGR02210.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01215.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0000918 - division septum site selection [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_003544873.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: protein motif:HMM:NF015716.2
GO:0000902 - cell morphogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:TIGR03426.1
COORDINATES: protein motif:HMM:TIGR00219.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063422.1
GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008907583.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159619.1
COORDINATES: protein motif:HMM:NF025572.2
COORDINATES: protein motif:HMM:NF019099.2
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: protein motif:HMM:NF014477.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012199509.1
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008515490.1
monovalent cation/H+ antiporter subunit D family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008515493.1
COORDINATES: similar to AA sequence:RefSeq:WP_008517930.1
COORDINATES: protein motif:HMM:NF006248.0
COORDINATES: similar to AA sequence:RefSeq:WP_008515501.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065186.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_008515504.1
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: similar to AA sequence:RefSeq:WP_008515510.1
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_012159623.1
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008515512.1
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_008515516.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_003419040.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014895289.1
GO:0008797 - aspartate ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003993.0
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_011343663.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020815563.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_008516704.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015758915.1
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: protein motif:HMM:NF014904.2
[Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008718797.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909341.1
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF021082.2
COORDINATES: protein motif:HMM:NF014713.2
GO:0017004 - cytochrome complex assembly [Evidence IEA]
energy-coupling factor ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014420.2
GO:0055085 - transmembrane transport [Evidence IEA]
energy-coupling factor transporter transmembrane component T
COORDINATES: protein motif:HMM:NF014007.2
GO:0000041 - transition metal ion transport [Evidence IEA]
energy-coupling factor ABC transporter permease
COORDINATES: protein motif:HMM:NF016154.2
COORDINATES: protein motif:HMM:NF017088.2
COORDINATES: protein motif:HMM:NF024241.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: protein motif:HMM:TIGR01499.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008841 - dihydrofolate synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003519337.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_008409923.1
COORDINATES: similar to AA sequence:RefSeq:WP_014826221.1
COORDINATES: similar to AA sequence:RefSeq:WP_008409927.1
COORDINATES: similar to AA sequence:RefSeq:WP_008409928.1
COORDINATES: similar to AA sequence:RefSeq:WP_014826218.1
COORDINATES: similar to AA sequence:RefSeq:WP_003159025.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008907821.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015542485.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004622133.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014256007.1
GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046914 - transition metal ion binding [Evidence IEA]
iron dependent repressor, metal binding and dimerization domain protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_018212416.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_012031978.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013121392.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014795496.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_008909140.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:TIGR00042.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_014354713.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013809731.1
alanine-tRNA synthetase second additional domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010237698.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014521969.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008413309.1
COORDINATES: similar to AA sequence:RefSeq:WP_012032661.1
acyclic terpene utilization AtuA family protein
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: similar to AA sequence:RefSeq:WP_013240650.1
GO:0050096 - methylaspartate ammonia-lyase activity [Evidence IEA]
GO:0019670 - anaerobic glutamate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909154.1
GO:0050097 - methylaspartate mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013240652.1
methylaspartate mutase accessory protein GlmL
COORDINATES: similar to AA sequence:RefSeq:WP_008909152.1
COORDINATES: similar to AA sequence:RefSeq:WP_006440539.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008515534.1
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159043.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015102.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF028046.2
COORDINATES: similar to AA sequence:RefSeq:WP_013810674.1
COORDINATES: protein motif:HMM:NF001965.0
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]; GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0018277 - protein deamination [Evidence IEA]; GO:0006482 - protein demethylation [Evidence IEA]
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:NF015898.2
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006523858.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065291.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159932.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018590603.1
COORDINATES: protein motif:HMM:NF015822.2
COORDINATES: similar to AA sequence:RefSeq:WP_009062177.1
COORDINATES: protein motif:HMM:NF019490.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063340.1
GO:0140741 - tRNA U4 sulfurtransferase [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005603235.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF015679.2
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_003468901.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016830 - carbon-carbon lyase activity [Evidence IEA]
GO:0006290 - pyrimidine dimer repair [Evidence IEA]; GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011010976.1
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0120225 - coenzyme A binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006858401.1
COORDINATES: protein motif:HMM:NF012267.2
COORDINATES: protein motif:HMM:NF015889.2
COORDINATES: similar to AA sequence:RefSeq:WP_014254789.1
COORDINATES: similar to AA sequence:RefSeq:WP_015262159.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038400.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063331.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005366747.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
type I-B CRISPR-associated endonuclease Cas1b
COORDINATES: similar to AA sequence:RefSeq:WP_012063329.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063328.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010248760.1
type I-B CRISPR-associated protein Cas5b
COORDINATES: similar to AA sequence:RefSeq:WP_012063326.1
type I-B CRISPR-associated protein Cas7/Cst2/DevR
COORDINATES: similar to AA sequence:RefSeq:WP_012063325.1
type I-B CRISPR-associated protein Cas8b1/Cst1
COORDINATES: protein motif:HMM:TIGR01877.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656050.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF018798.2
COORDINATES: similar to AA sequence:RefSeq:WP_017894601.1
anaerobic nitric oxide reductase flavorubredoxin
COORDINATES: similar to AA sequence:RefSeq:WP_008418604.1
COORDINATES: similar to AA sequence:RefSeq:WP_000704461.1
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_003364121.1
COORDINATES: similar to AA sequence:RefSeq:WP_008410463.1
COORDINATES: similar to AA sequence:RefSeq:WP_009061462.1
COORDINATES: protein motif:HMM:NF012376.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_011877803.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02092.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: similar to AA sequence:RefSeq:WP_011877801.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061011.1
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017751349.1
GO:0019346 - transsulfuration [Evidence IEA]
bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase
COORDINATES: similar to AA sequence:RefSeq:WP_012158934.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158935.1
COORDINATES: protein motif:HMM:NF015094.2
lipopolysaccharide core heptose(II) kinase RfaY
COORDINATES: protein motif:HMM:NF036410.2
COORDINATES: protein motif:HMM:NF015983.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: protein motif:HMM:NF024842.2
COORDINATES: protein motif:HMM:TIGR00912.1
GO:0009847 - spore germination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02887.1
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0009847 - spore germination [Evidence IEA]
Ger(x)C family spore germination protein
COORDINATES: protein motif:HMM:NF015292.2
COORDINATES: protein motif:HMM:NF024707.2
B12-binding domain-containing radical SAM protein
COORDINATES: protein motif:HMM:NF019121.2
COORDINATES: protein motif:HMM:NF012792.2
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017902.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF015515.2
GO:0015297 - antiporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022702.2
COORDINATES: similar to AA sequence:RefSeq:WP_015924904.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]; GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04041.1
YjjW family glycine radical enzyme activase
COORDINATES: protein motif:HMM:TIGR04040.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064265.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004629496.1
COORDINATES: similar to AA sequence:RefSeq:WP_011459575.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: similar to AA sequence:RefSeq:WP_003540404.1
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014183991.1
COORDINATES: similar to AA sequence:RefSeq:WP_008681539.1
COORDINATES: similar to AA sequence:RefSeq:WP_018592287.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007788598.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517255.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012282402.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011986121.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:NF022188.2
Rossmann-like and DUF2520 domain-containing protein
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: similar to AA sequence:RefSeq:WP_002843718.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014254429.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065586.1
COORDINATES: similar to AA sequence:RefSeq:WP_008517200.1
COORDINATES: similar to AA sequence:RefSeq:WP_008517201.1
COORDINATES: protein motif:HMM:NF013117.2
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011971194.1
COORDINATES: similar to AA sequence:RefSeq:WP_005210542.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_012064038.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
ammonia-forming cytochrome c nitrite reductase subunit c552
COORDINATES: similar to AA sequence:RefSeq:WP_012064036.1
GO:0020037 - heme binding [Evidence IEA]
c-type cytochrome biogenesis protein CcsB
COORDINATES: protein motif:HMM:NF016995.2
COORDINATES: similar to AA sequence:RefSeq:WP_015359078.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IEA]; GO:0009165 - nucleotide biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013273205.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: similar to AA sequence:RefSeq:WP_011196875.1
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_015957783.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-linked oxidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013238808.1
electron transfer flavoprotein subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003457975.1
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015390917.1
GO:0050043 - lactate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003490178.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008516786.1
COORDINATES: similar to AA sequence:RefSeq:WP_006427019.1
COORDINATES: similar to AA sequence:RefSeq:WP_014901657.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160315.1
COORDINATES: protein motif:HMM:NF021363.2
COORDINATES: similar to AA sequence:RefSeq:WP_012342769.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014409.2
COORDINATES: protein motif:HMM:NF015531.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:TIGR04085.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611214.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
4Fe-4S cluster-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024949.2
helix-turn-helix domain-containing protein
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002597644.1
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010073919.1
COORDINATES: similar to AA sequence:RefSeq:WP_004464064.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003375556.1
COORDINATES: similar to AA sequence:RefSeq:WP_011722156.1
pyridoxal phosphate-dependent class II aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003365058.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_003375158.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076824.1
GO:0043755 - alpha-ribazole phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013725594.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012160050.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909182.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379091.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005214224.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014184426.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014198.2
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006719044.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009530694.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF020130.2
COORDINATES: similar to AA sequence:RefSeq:WP_003373750.1
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016205970.1
COORDINATES: protein motif:HMM:NF014684.2
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011196319.1
COORDINATES: protein motif:HMM:NF024825.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015325.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF005308.0
COORDINATES: similar to AA sequence:RefSeq:WP_008419273.1
COORDINATES: protein motif:HMM:NF025885.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003417347.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009288893.1
COORDINATES: similar to AA sequence:RefSeq:WP_009065290.1
COORDINATES: similar to AA sequence:RefSeq:WP_014186165.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004444278.1
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014521820.1
COORDINATES: protein motif:HMM:NF019618.2
COORDINATES: similar to AA sequence:RefSeq:WP_010963892.1
COORDINATES: similar to AA sequence:RefSeq:WP_005805516.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: similar to AA sequence:RefSeq:WP_008516773.1
GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025050.2
COORDINATES: protein motif:HMM:NF015279.2
COORDINATES: similar to AA sequence:RefSeq:WP_018592369.1
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009261090.1
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013707.2
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006520712.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014827255.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014186312.1
COORDINATES: protein motif:HMM:NF014098.2
COORDINATES: similar to AA sequence:RefSeq:WP_003358931.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR00586.1
GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160438.1
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064626.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064627.1
COORDINATES: protein motif:HMM:NF014543.2
COORDINATES: similar to AA sequence:RefSeq:WP_020814968.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012064802.1
COORDINATES: protein motif:HMM:TIGR03652.1
GO:0030091 - protein repair [Evidence IEA]
iron-sulfur cluster repair di-iron protein
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_004629507.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_008907579.1
COORDINATES: protein motif:HMM:NF013426.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971771.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008514816.1
COORDINATES: similar to AA sequence:RefSeq:WP_008514814.1
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF022171.2
COORDINATES: similar to AA sequence:RefSeq:WP_015945107.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014126.2
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF022376.2
DUF2791 family P-loop domain-containing protein
COORDINATES: protein motif:HMM:NF017206.2
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:TIGR03592.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_014828271.1
COORDINATES: similar to AA sequence:RefSeq:WP_014521201.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_003430244.1
COORDINATES: similar to AA sequence:RefSeq:WP_003375467.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013239529.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064599.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013086.2
COORDINATES: protein motif:HMM:NF014600.2
GO:0008233 - peptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase family protein
GO:0098561 - methyl accepting chemotaxis protein complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013273704.1
COORDINATES: similar to AA sequence:RefSeq:WP_012283673.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF014078.2
COORDINATES: similar to AA sequence:RefSeq:WP_017414896.1
COORDINATES: similar to AA sequence:RefSeq:WP_015044606.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: similar to AA sequence:RefSeq:WP_010293340.1
COORDINATES: similar to AA sequence:RefSeq:WP_003486452.1
COORDINATES: protein motif:HMM:TIGR00410.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00099.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008503456.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF013473.2
COORDINATES: similar to AA sequence:RefSeq:WP_002581323.1
COORDINATES: protein motif:HMM:NF012385.2
sigma-54-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003408140.1
GO:0008706 - 6-phospho-beta-glucosidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013271169.1
PTS lactose/cellobiose transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_012060824.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064487.1
COORDINATES: similar to AA sequence:RefSeq:WP_003366689.1
COORDINATES: similar to AA sequence:RefSeq:WP_010247880.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065242.1
COORDINATES: similar to AA sequence:RefSeq:WP_012058177.1
COORDINATES: similar to AA sequence:RefSeq:WP_012424769.1
COORDINATES: similar to AA sequence:RefSeq:WP_010293339.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356933.1
COORDINATES: similar to AA sequence:RefSeq:WP_012060202.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356936.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011722940.1
EutN/CcmL family microcompartment protein
COORDINATES: protein motif:HMM:NF014494.2
COORDINATES: similar to AA sequence:RefSeq:WP_003374315.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013382326.1
COORDINATES: similar to AA sequence:RefSeq:WP_007494473.1
propanediol utilization microcompartment protein PduA
COORDINATES: similar to AA sequence:RefSeq:WP_007494471.1
COORDINATES: protein motif:HMM:NF014356.2
glycerol dehydratase reactivase beta/small subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014356943.1
diol dehydratase reactivase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009624800.1
COORDINATES: similar to AA sequence:RefSeq:WP_009624801.1
propanediol/glycerol family dehydratase medium subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003441619.1
propanediol/glycerol family dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002568825.1
GO:0031469 - bacterial microcompartment [Evidence IEA]
propanediol utilization microcompartment protein PduB
COORDINATES: similar to AA sequence:RefSeq:WP_001183618.1
COORDINATES: similar to AA sequence:RefSeq:WP_012422814.1
PocR ligand-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009614650.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253544.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909905.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392364.1
COORDINATES: similar to AA sequence:RefSeq:WP_003479004.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907424.1
COORDINATES: similar to AA sequence:RefSeq:WP_003488680.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361219.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200075.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361221.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361222.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063933.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009001419.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063935.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008907709.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063937.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063938.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063939.1
COORDINATES: protein motif:HMM:TIGR01683.1
COORDINATES: protein motif:HMM:NF013481.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_003493023.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721598.1
COORDINATES: protein motif:HMM:NF024741.2
COORDINATES: similar to AA sequence:RefSeq:WP_007050018.1
COORDINATES: similar to AA sequence:RefSeq:WP_003424232.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062078.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658323.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657925.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003356423.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016205661.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
maltose acetyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003449322.1
GO:0015572 - N-acetylglucosamine transmembrane transporter activity [Evidence IEA]
N-acetylglucosamine-specific PTS transporter subunit IIBC
COORDINATES: protein motif:HMM:NF012578.2
COORDINATES: similar to AA sequence:RefSeq:WP_016205935.1
COORDINATES: protein motif:HMM:NF015683.2
glutathionylspermidine synthase family protein
COORDINATES: protein motif:HMM:NF016032.2
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
glutamate-cysteine ligase family protein
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013484779.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008394308.1
COORDINATES: similar to AA sequence:RefSeq:WP_008717362.1
COORDINATES: similar to AA sequence:RefSeq:WP_017209485.1
COORDINATES: similar to AA sequence:RefSeq:WP_007783307.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025159.2
COORDINATES: similar to AA sequence:RefSeq:WP_016205799.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_015392403.1
COORDINATES: similar to AA sequence:RefSeq:WP_000727177.1
COORDINATES: protein motif:HMM:NF022114.2
Gmad2 immunoglobulin-like domain-containing protein
COORDINATES: protein motif:HMM:NF024908.2
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: similar to AA sequence:RefSeq:WP_019214903.1
GO:0043295 - glutathione binding [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015567.2
COORDINATES: similar to AA sequence:RefSeq:WP_017416505.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062030.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394145.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064869.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064870.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003513438.1
COORDINATES: similar to AA sequence:RefSeq:WP_003513449.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392104.1
COORDINATES: similar to AA sequence:RefSeq:WP_008513920.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003480946.1
COORDINATES: similar to AA sequence:RefSeq:WP_007157470.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_007157471.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160179.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006573775.1
COORDINATES: similar to AA sequence:RefSeq:WP_003445507.1
COORDINATES: similar to AA sequence:RefSeq:WP_014825433.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: similar to AA sequence:RefSeq:WP_014355281.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355274.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024565.2
COORDINATES: similar to AA sequence:RefSeq:WP_018213162.1
COORDINATES: similar to AA sequence:RefSeq:WP_002566135.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025693.2
COORDINATES: similar to AA sequence:RefSeq:WP_002566138.1
COORDINATES: similar to AA sequence:RefSeq:WP_018305998.1
COORDINATES: protein motif:HMM:NF017539.2
COORDINATES: similar to AA sequence:RefSeq:WP_006524178.1
COORDINATES: similar to AA sequence:RefSeq:WP_012283923.1
COORDINATES: similar to AA sequence:RefSeq:WP_012283924.1
COORDINATES: similar to AA sequence:RefSeq:WP_008817754.1
COORDINATES: similar to AA sequence:RefSeq:WP_012283926.1
COORDINATES: similar to AA sequence:RefSeq:WP_012283927.1
COORDINATES: similar to AA sequence:RefSeq:WP_008817755.1
COORDINATES: similar to AA sequence:RefSeq:WP_014315087.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065082.1
COORDINATES: similar to AA sequence:RefSeq:WP_016289746.1
COORDINATES: similar to AA sequence:RefSeq:WP_004605789.1
COORDINATES: similar to AA sequence:RefSeq:WP_009269272.1
COORDINATES: similar to AA sequence:RefSeq:WP_014315082.1
GO:0004519 - endonuclease activity [Evidence IEA]
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019155134.1
P27 family phage terminase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020072935.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065072.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065071.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065070.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838226.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065068.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065067.1
COORDINATES: similar to AA sequence:RefSeq:WP_014387050.1
COORDINATES: similar to AA sequence:RefSeq:WP_014315070.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244608.1
COORDINATES: similar to AA sequence:RefSeq:WP_015926199.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065060.1
COORDINATES: similar to AA sequence:RefSeq:WP_004400079.1
COORDINATES: similar to AA sequence:RefSeq:WP_002349515.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516027.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051369.1
COORDINATES: similar to AA sequence:RefSeq:WP_019155109.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065054.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065052.1
COORDINATES: similar to AA sequence:RefSeq:WP_004103219.1
COORDINATES: similar to AA sequence:RefSeq:WP_016287175.1
COORDINATES: similar to AA sequence:RefSeq:WP_020072964.1
COORDINATES: similar to AA sequence:RefSeq:WP_002362819.1
COORDINATES: similar to AA sequence:RefSeq:WP_004052345.1
COORDINATES: protein motif:HMM:NF019509.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008909003.1
COORDINATES: similar to AA sequence:RefSeq:WP_004611975.1
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF012298.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012424300.1
COORDINATES: similar to AA sequence:RefSeq:WP_012720269.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019163206.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018425.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063378.1
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_016208156.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061250.1
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF024157.2
COORDINATES: similar to AA sequence:RefSeq:WP_003423063.1
COORDINATES: similar to AA sequence:RefSeq:WP_017416366.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012992694.1
IS200/IS605 family element RNA-guided endonuclease TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_045009167.1
COORDINATES: similar to AA sequence:RefSeq:WP_016286247.1
COORDINATES: similar to AA sequence:RefSeq:WP_014827373.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074265.1
effector binding domain-containing protein
COORDINATES: protein motif:HMM:NF024804.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: similar to AA sequence:RefSeq:WP_000377724.1
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:NF014573.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010249375.1
COORDINATES: similar to AA sequence:RefSeq:WP_017754372.1
Msr family ABC-F type ribosomal protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_008514281.1
COORDINATES: similar to AA sequence:RefSeq:WP_008513962.1
COORDINATES: similar to AA sequence:RefSeq:WP_008513960.1
COORDINATES: protein motif:HMM:NF024063.2
COORDINATES: protein motif:HMM:NF024819.2
COORDINATES: similar to AA sequence:RefSeq:WP_003445528.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063219.1
COORDINATES: similar to AA sequence:RefSeq:WP_020815235.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015614414.1
COORDINATES: similar to AA sequence:RefSeq:WP_004607774.1
COORDINATES: protein motif:HMM:NF021758.2
COORDINATES: protein motif:HMM:TIGR01076.1
COORDINATES: similar to AA sequence:RefSeq:WP_014793575.1
COORDINATES: similar to AA sequence:RefSeq:WP_014793574.1
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: similar to AA sequence:RefSeq:WP_009004244.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012063256.1
COORDINATES: similar to AA sequence:RefSeq:WP_012058655.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074335.1
COORDINATES: protein motif:HMM:NF016873.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064824.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013656663.1
GO:0005504 - fatty acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: protein motif:HMM:NF022281.2
COORDINATES: protein motif:HMM:NF016394.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064812.1
COORDINATES: similar to AA sequence:RefSeq:WP_014904102.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590676.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971411.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0051144 - propanediol catabolic process [Evidence IEA]
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010296731.1
COORDINATES: similar to AA sequence:RefSeq:WP_016205587.1
COORDINATES: similar to AA sequence:RefSeq:WP_002581732.1
COORDINATES: similar to AA sequence:RefSeq:WP_008680714.1
COORDINATES: similar to AA sequence:RefSeq:WP_005213708.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064854.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005366634.1
COORDINATES: protein motif:HMM:NF022889.2
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014120025.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392109.1
COORDINATES: similar to AA sequence:RefSeq:WP_013378838.1
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:TIGR01098.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0043168 - anion binding [Evidence IEA]; GO:0043225 - ATPase-coupled inorganic anion transmembrane transporter activity [Evidence IEA]
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002597465.1
COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003513961.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014794470.1
COORDINATES: protein motif:HMM:NF017280.2
COORDINATES: similar to AA sequence:RefSeq:WP_008752830.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160686.1
COORDINATES: protein motif:HMM:NF024952.2
COORDINATES: similar to AA sequence:RefSeq:WP_018590533.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: similar to AA sequence:RefSeq:WP_017353934.1
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:NF039830.1
COORDINATES: similar to AA sequence:RefSeq:WP_010294407.1
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: protein motif:HMM:NF024940.2
COORDINATES: protein motif:HMM:NF014165.2
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016207125.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0019808 - polyamine binding [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004627446.1
COORDINATES: similar to AA sequence:RefSeq:WP_003376618.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721317.1
COORDINATES: similar to AA sequence:RefSeq:WP_007286148.1
COORDINATES: similar to AA sequence:RefSeq:WP_009064536.1
COORDINATES: similar to AA sequence:RefSeq:WP_009064579.1
COORDINATES: similar to AA sequence:RefSeq:WP_014256284.1
COORDINATES: similar to AA sequence:RefSeq:WP_015614791.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525537.1
GO:0050371 - tyrosine phenol-lyase activity [Evidence IEA]
GO:0006570 - tyrosine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006521455.1
COORDINATES: similar to AA sequence:RefSeq:WP_009063427.1
COORDINATES: protein motif:HMM:TIGR00010.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015393637.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158619.1
COORDINATES: similar to AA sequence:RefSeq:WP_015260922.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076917.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_007859361.1
septal ring lytic transglycosylase RlpA family protein
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF019278.2
COORDINATES: similar to AA sequence:RefSeq:WP_015359592.1
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:NF024055.2
COORDINATES: similar to AA sequence:RefSeq:WP_012198734.1
COORDINATES: similar to AA sequence:RefSeq:WP_010293397.1
COORDINATES: protein motif:HMM:TIGR04350.1
GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002576062.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_017416275.1
GO:0018826 - methionine gamma-lyase activity [Evidence IEA]
GO:0009093 - cysteine catabolic process [Evidence IEA]; GO:0009087 - methionine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009534111.1
COORDINATES: protein motif:HMM:NF021463.2
COORDINATES: similar to AA sequence:RefSeq:WP_014120246.1
COORDINATES: similar to AA sequence:RefSeq:WP_019540124.1
COORDINATES: similar to AA sequence:RefSeq:WP_001082285.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_004625877.1
COORDINATES: protein motif:HMM:NF017880.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158220.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_008256497.1
COORDINATES: protein motif:HMM:NF024729.2
COORDINATES: similar to AA sequence:RefSeq:WP_011879321.1
GO:0008233 - peptidase activity [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014183449.1
COORDINATES: similar to AA sequence:RefSeq:WP_003540476.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908252.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008515751.1
COORDINATES: protein motif:HMM:NF012696.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_013379002.1
COORDINATES: similar to AA sequence:RefSeq:WP_008515749.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013121532.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007060555.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_012033856.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013810778.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908244.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF016114.2
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02395.1
COORDINATES: similar to AA sequence:RefSeq:WP_019225004.1
COORDINATES: similar to AA sequence:RefSeq:WP_012033862.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015759308.1
COORDINATES: similar to AA sequence:RefSeq:WP_003371293.1
COORDINATES: protein motif:HMM:TIGR00744.1
GO:0004340 - glucokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008515731.1
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971650.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971651.1
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR01097.1
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: similar to AA sequence:RefSeq:WP_015358880.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005805320.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021500.2
glucodextranase DOMON-like domain-containing protein
COORDINATES: protein motif:HMM:NF011443.0
putative manganese-dependent inorganic diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_013121178.1
GO:0071793 - bacillithiol biosynthetic process [Evidence IEA]
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA
COORDINATES: protein motif:HMM:TIGR04001.1
GO:0019213 - deacetylase activity [Evidence IEA]
bacillithiol biosynthesis deacetylase BshB1
COORDINATES: protein motif:HMM:NF021586.2
bacillithiol biosynthesis cysteine-adding enzyme BshC
COORDINATES: similar to AA sequence:RefSeq:WP_003545117.1
COORDINATES: similar to AA sequence:RefSeq:WP_013176018.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:NF012422.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:TIGR03172.2
selenium cofactor biosynthesis protein YqeC
COORDINATES: protein motif:HMM:TIGR00245.1
iron export ABC transporter permease subunit FetB
phosphate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011196942.1
COORDINATES: similar to AA sequence:RefSeq:WP_004454983.1
COORDINATES: similar to AA sequence:RefSeq:WP_008398244.1
COORDINATES: protein motif:HMM:NF012706.2
glutathione ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016816.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013625817.1
COORDINATES: similar to AA sequence:RefSeq:WP_008515721.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012281814.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014256199.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF036497.2
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF038347.1
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_012059166.1
COORDINATES: protein motif:HMM:NF014669.2
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019884.2
COORDINATES: similar to AA sequence:RefSeq:WP_005815581.1
COORDINATES: similar to AA sequence:RefSeq:WP_013121587.1
COORDINATES: similar to AA sequence:RefSeq:WP_013824314.1
COORDINATES: similar to AA sequence:RefSeq:WP_143270537.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013176034.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF024214.2
GO:0005525 - GTP binding [Evidence IEA]; GO:0061603 - molybdenum cofactor guanylyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015542226.1
GO:0080135 - regulation of cellular response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_011722963.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: protein motif:HMM:TIGR00208.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014527.2
COORDINATES: similar to AA sequence:RefSeq:WP_003513581.1
COORDINATES: similar to AA sequence:RefSeq:WP_016628364.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010073496.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_002447465.1
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: similar to AA sequence:RefSeq:WP_016613886.1
COORDINATES: similar to AA sequence:RefSeq:WP_004619103.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014660.2
COORDINATES: protein motif:HMM:TIGR02550.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02492.1
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: protein motif:HMM:TIGR03824.1
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:NF012383.2
COORDINATES: similar to AA sequence:RefSeq:WP_018590753.1
COORDINATES: similar to AA sequence:RefSeq:WP_008410533.1
COORDINATES: similar to AA sequence:RefSeq:WP_003437342.1
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: similar to AA sequence:RefSeq:WP_008519019.1
COORDINATES: protein motif:HMM:NF017221.2
COORDINATES: similar to AA sequence:RefSeq:WP_014253520.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012031641.1
COORDINATES: protein motif:HMM:NF016194.2
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062473.1
COORDINATES: similar to AA sequence:RefSeq:WP_013174431.1
COORDINATES: similar to AA sequence:RefSeq:WP_011877602.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: protein motif:HMM:TIGR03916.1
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:NF024955.2
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF020543.2
COORDINATES: protein motif:HMM:NF013143.2
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013120820.1
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: similar to AA sequence:RefSeq:WP_013822399.1
COORDINATES: similar to AA sequence:RefSeq:WP_009262886.1
COORDINATES: similar to AA sequence:RefSeq:WP_000003398.1
COORDINATES: similar to AA sequence:RefSeq:WP_005812984.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_003447068.1
COORDINATES: similar to AA sequence:RefSeq:WP_018305061.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR04518.1
folate family ECF transporter S component
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_009266889.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011878839.1
GO:0000023 - maltose metabolic process [Evidence IEA]
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008908662.1
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010075781.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_008411283.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_010075813.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF025309.2
COORDINATES: similar to AA sequence:RefSeq:WP_014792262.1
COORDINATES: similar to AA sequence:RefSeq:WP_008514757.1
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_014255169.1
COORDINATES: similar to AA sequence:RefSeq:WP_017415491.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656317.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589873.1
GO:0015209 - cytosine transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011971663.1
COORDINATES: similar to AA sequence:RefSeq:WP_002592073.1
GO:0003729 - mRNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:NF017864.2
COORDINATES: similar to AA sequence:RefSeq:WP_012065172.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_008514150.1
COORDINATES: similar to AA sequence:RefSeq:WP_009168168.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909229.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024743.2
COORDINATES: protein motif:HMM:NF014896.2
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF000355.3
COORDINATES: similar to AA sequence:RefSeq:WP_002581118.1
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012424029.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003428202.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255719.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF017856.2
COORDINATES: similar to AA sequence:RefSeq:WP_004083112.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063209.1
COORDINATES: similar to AA sequence:RefSeq:WP_003445113.1
COORDINATES: protein motif:HMM:NF037393.2
COORDINATES: protein motif:HMM:TIGR02884.1
delta-lactam-biosynthetic de-N-acetylase
COORDINATES: similar to AA sequence:RefSeq:WP_017212521.1
COORDINATES: similar to AA sequence:RefSeq:WP_008515397.1
GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO:0015824 - proline transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: protein motif:HMM:NF019314.2
COORDINATES: similar to AA sequence:RefSeq:WP_008909674.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909675.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013239518.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909677.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239520.1
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239522.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239523.1
TadE/TadG family type IV pilus assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_013239524.1
COORDINATES: similar to AA sequence:RefSeq:WP_005540900.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239525.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239526.1
COORDINATES: protein motif:HMM:NF013632.2
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010232990.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008887 - glycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017416086.1
COORDINATES: similar to AA sequence:RefSeq:WP_010243612.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971165.1
COORDINATES: similar to AA sequence:RefSeq:WP_011010950.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
aminopeptidase P N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF039343.1
CpsB/CapC family capsule biosynthesis tyrosine phosphatase
COORDINATES: protein motif:HMM:NF025628.2
COORDINATES: similar to AA sequence:RefSeq:WP_019278423.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025644.2
COORDINATES: protein motif:HMM:NF023184.2
nitrous oxide-stimulated promoter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008681536.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253542.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062234.1
COORDINATES: protein motif:HMM:NF019507.2
COORDINATES: similar to AA sequence:RefSeq:WP_008677244.1
COORDINATES: similar to AA sequence:RefSeq:WP_006565479.1
COORDINATES: similar to AA sequence:RefSeq:WP_018085303.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015391549.1
COORDINATES: similar to AA sequence:RefSeq:WP_003378288.1
glycerol-3-phosphate responsive antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_016125454.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018590062.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF014049.2
COORDINATES: protein motif:HMM:NF023116.2
COORDINATES: similar to AA sequence:RefSeq:WP_016205653.1
COORDINATES: similar to AA sequence:RefSeq:WP_008394312.1
COORDINATES: protein motif:HMM:NF002559.0
COORDINATES: protein motif:HMM:NF014326.2
COORDINATES: similar to AA sequence:RefSeq:WP_003483131.1
COORDINATES: similar to AA sequence:RefSeq:WP_008678226.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065358.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160047.1
nucleoside recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011640818.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971611.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158279.1
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012201379.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010074792.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_004616751.1
COORDINATES: similar to AA sequence:RefSeq:WP_014792916.1
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971733.1
COORDINATES: similar to AA sequence:RefSeq:WP_009906417.1
COORDINATES: protein motif:HMM:NF017946.2
COORDINATES: similar to AA sequence:RefSeq:WP_013658855.1
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: similar to AA sequence:RefSeq:WP_012062795.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012062426.1
GO:0018492 - carbon-monoxide dehydrogenase (acceptor) activity [Evidence IEA]
anaerobic carbon-monoxide dehydrogenase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017415227.1
COORDINATES: similar to AA sequence:RefSeq:WP_015925987.1
COORDINATES: protein motif:HMM:NF013980.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
SprT family zinc-dependent metalloprotease
COORDINATES: protein motif:HMM:NF025010.2
SurA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012158563.1
COORDINATES: similar to AA sequence:RefSeq:WP_017417023.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012103166.1
COORDINATES: similar to AA sequence:RefSeq:WP_007063661.1
GO:0016020 - membrane [Evidence IEA]; GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00835.1
GO:0005283 - amino acid:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062441.1
COORDINATES: similar to AA sequence:RefSeq:WP_007286073.1
reductive dehalogenase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009325403.1
COORDINATES: protein motif:HMM:NF015563.2
COORDINATES: similar to AA sequence:RefSeq:WP_015393487.1
COORDINATES: protein motif:HMM:NF024084.2
COORDINATES: protein motif:HMM:NF025774.2
COORDINATES: similar to AA sequence:RefSeq:WP_003439842.1
COORDINATES: similar to AA sequence:RefSeq:WP_015614168.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065383.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF028259.2
COORDINATES: similar to AA sequence:RefSeq:WP_010239666.1
COORDINATES: similar to AA sequence:RefSeq:WP_012343993.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007063871.1
PLP-dependent aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012062443.1
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_004034561.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: similar to AA sequence:RefSeq:WP_014904133.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_015393393.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF028468.2
COORDINATES: protein motif:HMM:NF013421.2
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010233701.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016657 - oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_010966558.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065293.1
COORDINATES: similar to AA sequence:RefSeq:WP_004624498.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012579.2
BglG family transcription antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_004454640.1
COORDINATES: protein motif:HMM:NF021631.2
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008678968.1
COORDINATES: similar to AA sequence:RefSeq:WP_011722902.1
COORDINATES: similar to AA sequence:RefSeq:WP_009297193.1
COORDINATES: similar to AA sequence:RefSeq:WP_013809510.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_003410957.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_012031707.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024788.2
PLDc N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012065566.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065567.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065568.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020376650.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010299111.1
alanine/ornithine racemase family PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012063501.1
GlmL-related ornithine degradation protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361503.1
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
D-ornithine 4,5-aminomutase subunit OraE
COORDINATES: protein motif:HMM:NF027866.2
COORDINATES: similar to AA sequence:RefSeq:WP_014826858.1
2-amino-4-oxopentanoate thiolase subunit OrtB
COORDINATES: similar to AA sequence:RefSeq:WP_010292928.1
2-amino-4-oxopentanoate thiolase subunit OrtA
COORDINATES: similar to AA sequence:RefSeq:WP_012063496.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589170.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF041464.1
COORDINATES: similar to AA sequence:RefSeq:WP_003454434.1
COORDINATES: similar to AA sequence:RefSeq:WP_020063210.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514691.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008516270.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065410.1
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_003470277.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010073712.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003544674.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015924326.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010246767.1
COORDINATES: similar to AA sequence:RefSeq:WP_014312132.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:NP_388020.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
KOW domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015755981.1
COORDINATES: similar to AA sequence:RefSeq:WP_003541057.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012301398.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514660.1
COORDINATES: similar to AA sequence:RefSeq:WP_001085235.1
COORDINATES: similar to AA sequence:RefSeq:WP_018214399.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514654.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065426.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008410872.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246797.1
COORDINATES: similar to AA sequence:RefSeq:WP_008516308.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246801.1
COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1
COORDINATES: similar to AA sequence:RefSeq:WP_009243086.1
COORDINATES: similar to AA sequence:RefSeq:WP_003367823.1
COORDINATES: similar to AA sequence:RefSeq:WP_006902841.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876610.1
COORDINATES: similar to AA sequence:RefSeq:WP_001148024.1
COORDINATES: similar to AA sequence:RefSeq:WP_007885930.1
COORDINATES: similar to AA sequence:RefSeq:WP_012301381.1
COORDINATES: similar to AA sequence:RefSeq:WP_009984994.1
COORDINATES: similar to AA sequence:RefSeq:WP_011967512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014825569.1
COORDINATES: similar to AA sequence:RefSeq:NP_387996.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015755958.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013382421.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119203.1
COORDINATES: similar to AA sequence:RefSeq:WP_012282465.1
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018087040.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_008516346.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_015260976.1
COORDINATES: similar to AA sequence:RefSeq:WP_018307172.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_008516352.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381851.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119195.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: protein motif:HMM:TIGR00964.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271142.1
COORDINATES: similar to AA sequence:RefSeq:WP_013809477.1
COORDINATES: similar to AA sequence:RefSeq:WP_011928381.1
RNA polymerase sporulation sigma factor SigH
COORDINATES: similar to AA sequence:RefSeq:WP_011459087.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_009617638.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012843.2
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
ribonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009895184.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013119182.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015043970.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013657977.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010966462.1
COORDINATES: similar to AA sequence:RefSeq:WP_013840341.1
COORDINATES: similar to AA sequence:RefSeq:WP_012048365.1
COORDINATES: protein motif:HMM:TIGR00473.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012158335.1
DNA integrity scanning diadenylate cyclase DisA
COORDINATES: similar to AA sequence:RefSeq:WP_008907541.1
COORDINATES: similar to AA sequence:RefSeq:WP_012282437.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013119157.1
GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008515619.1
COORDINATES: protein motif:HMM:NF017648.2
COORDINATES: protein motif:HMM:NF015056.2
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012341969.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011877117.1
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: protein motif:HMM:NF024598.2
COORDINATES: protein motif:HMM:TIGR00413.1
COORDINATES: similar to AA sequence:RefSeq:WP_005814946.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119146.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006522910.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013824193.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909571.1
COORDINATES: similar to AA sequence:RefSeq:WP_002846696.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: similar to AA sequence:RefSeq:WP_008518457.1
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008412229.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003544954.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_013119134.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003544962.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003516448.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018591592.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005874204.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158455.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159045.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013119121.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010240172.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02865.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014182659.1
S1 domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: protein motif:HMM:NF021118.2
COORDINATES: protein motif:HMM:TIGR02892.1
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: similar to AA sequence:RefSeq:WP_009794840.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015758.2
MazG nucleotide pyrophosphohydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF015013.2
COORDINATES: similar to AA sequence:RefSeq:WP_008412147.1
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013368.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013119053.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253695.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_002605625.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013840247.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01743.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0045982 - negative regulation of purine nucleobase metabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011876488.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: protein motif:HMM:NF010623.0
GO:0051235 - maintenance of location [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013119046.1
GO:0044265 - cellular macromolecule catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014825268.1
vitamin B12-dependent ribonucleotide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_006523190.1
COORDINATES: similar to AA sequence:RefSeq:WP_011928167.1
COORDINATES: protein motif:HMM:NF024085.2
SafA/ExsA family spore coat assembly protein
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012065569.1
COORDINATES: similar to AA sequence:RefSeq:WP_013821235.1
COORDINATES: protein motif:HMM:NF016215.2
COORDINATES: similar to AA sequence:RefSeq:WP_018591971.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_013360690.1
GO:0043822 - ribonuclease M5 activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014825168.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359939.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: similar to AA sequence:RefSeq:WP_019278469.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007789195.1
GO:0008170 - N-methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016430 - tRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: protein motif:HMM:NF017923.2
COORDINATES: similar to AA sequence:RefSeq:WP_006523167.1
COORDINATES: protein motif:HMM:NF024575.2
DNA polymerase III subunit delta' C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003384432.1
COORDINATES: similar to AA sequence:RefSeq:WP_014256965.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013444.2
COORDINATES: protein motif:HMM:NF022223.2
COORDINATES: similar to AA sequence:RefSeq:WP_008908358.1
COORDINATES: protein motif:HMM:NF012730.2
LysM peptidoglycan-binding domain-containing M23 family metallopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_013271576.1
COORDINATES: protein motif:HMM:NF012622.2
dockerin type I repeat-containing protein
COORDINATES: protein motif:HMM:NF017520.2
COORDINATES: protein motif:HMM:TIGR01760.1
COORDINATES: similar to AA sequence:RefSeq:WP_008411621.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074658.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074659.1
COORDINATES: protein motif:HMM:TIGR01563.1
phage gp6-like head-tail connector protein
COORDINATES: protein motif:HMM:TIGR01554.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063542.1
GO:0008233 - peptidase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013656875.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063540.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063539.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656872.1
COORDINATES: protein motif:HMM:NF015550.2
GO:0051276 - chromosome organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007719010.1
COORDINATES: protein motif:HMM:NF013964.2
COORDINATES: similar to AA sequence:RefSeq:WP_020808019.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF018437.2
COORDINATES: similar to AA sequence:RefSeq:WP_004069567.1
COORDINATES: similar to AA sequence:RefSeq:WP_013623980.1
COORDINATES: protein motif:HMM:NF022027.2
COORDINATES: similar to AA sequence:RefSeq:WP_015559506.1
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_008518079.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015995.2
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011879498.1
proline/glycine betaine ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011100479.1
glycine betaine/L-proline ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006523162.1
COORDINATES: similar to AA sequence:RefSeq:WP_012282276.1
COORDINATES: similar to AA sequence:RefSeq:WP_012282275.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006523159.1
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018086037.1
COORDINATES: protein motif:HMM:NF019085.2
pro-sigmaK processing inhibitor BofA family protein
COORDINATES: protein motif:HMM:NF022165.2
COORDINATES: similar to AA sequence:RefSeq:WP_012634696.1
COORDINATES: similar to AA sequence:RefSeq:WP_003540813.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
COORDINATES: similar to AA sequence:RefSeq:WP_010073056.1
GO:0052717 - tRNA-specific adenosine-34 deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003540827.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012488.2
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013822513.1
COORDINATES: protein motif:HMM:TIGR02778.1
COORDINATES: protein motif:HMM:NF013252.2
COORDINATES: similar to AA sequence:RefSeq:WP_013841876.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007050403.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_015559194.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: protein motif:HMM:TIGR03827.1
putative beta-lysine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014901046.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008517336.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_002582815.1
COORDINATES: protein motif:HMM:NF000823.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003513337.1
COORDINATES: protein motif:HMM:TIGR00663.1
COORDINATES: similar to AA sequence:RefSeq:WP_011947895.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_011462335.1
COORDINATES: protein motif:HMM:TIGR00188.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527825.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_008517351.1
COORDINATES: protein motif:HMM:NF041568.1
GO:0051510 - regulation of unidimensional cell growth [Evidence IEA]
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: protein motif:HMM:NF003661.0
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_013121826.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_012065746.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:TIGR04285.1
GO:0032466 - negative regulation of cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015357740.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017352523.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_010965651.1
COORDINATES: protein motif:HMM:NF016365.2
COORDINATES: protein motif:HMM:NF013345.2
COORDINATES: protein motif:HMM:NF025935.2
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: protein motif:HMM:NF015643.2
COORDINATES: protein motif:HMM:NF018564.2
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_018591051.1
COORDINATES: similar to AA sequence:RefSeq:WP_004081863.1
TIGR03905 family TSCPD domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013121798.1
COORDINATES: similar to AA sequence:RefSeq:WP_003479405.1
COORDINATES: similar to AA sequence:RefSeq:WP_019224913.1
COORDINATES: similar to AA sequence:RefSeq:WP_012034025.1
COORDINATES: protein motif:HMM:NF024057.2
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: similar to AA sequence:RefSeq:WP_014829499.1
COORDINATES: similar to AA sequence:RefSeq:WP_015757579.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721030.1
COORDINATES: similar to AA sequence:RefSeq:WP_011017279.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF037997.1
GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160622.1
COORDINATES: protein motif:HMM:NF019079.2
two-component system activity regulator YycH
COORDINATES: protein motif:HMM:NF021186.2
two-component system regulatory protein YycI
COORDINATES: similar to AA sequence:RefSeq:WP_012065704.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0019277 - UDP-N-acetylgalactosamine biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012160614.1
COORDINATES: similar to AA sequence:RefSeq:WP_013724306.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: similar to AA sequence:RefSeq:WP_017826489.1
COORDINATES: similar to AA sequence:RefSeq:WP_013655137.1
COORDINATES: similar to AA sequence:RefSeq:WP_009170162.1
COORDINATES: similar to AA sequence:RefSeq:WP_018593213.1
COORDINATES: similar to AA sequence:RefSeq:WP_017212794.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160607.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512025.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009624947.1
TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_012160161.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076115.1
COORDINATES: similar to AA sequence:RefSeq:WP_008517514.1
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: similar to AA sequence:RefSeq:WP_009168346.1
GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015392612.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065648.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_013726610.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021778.2
GO:0052689 - carboxylic ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014164.2
GO:0004177 - aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012200641.1
COORDINATES: similar to AA sequence:RefSeq:WP_017416499.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: similar to AA sequence:RefSeq:WP_011971599.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059716.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617128.1
COORDINATES: similar to AA sequence:RefSeq:WP_003360314.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065652.1
COORDINATES: similar to AA sequence:RefSeq:WP_002596652.1
COORDINATES: similar to AA sequence:RefSeq:WP_015924201.1
COORDINATES: similar to AA sequence:RefSeq:WP_015395227.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064217.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008677826.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062691.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064441.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158054.1
COORDINATES: similar to AA sequence:RefSeq:WP_008678749.1
COORDINATES: similar to AA sequence:RefSeq:WP_011879509.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119069.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015617764.1
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063940.1
COORDINATES: protein motif:HMM:NF012700.2
COORDINATES: protein motif:HMM:NF019190.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160040.1
COORDINATES: protein motif:HMM:NF021127.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO:0045227 - capsule polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01085.1
UDP-N-acetylmuramyl-tripeptide synthetase
COORDINATES: protein motif:HMM:NF014442.2
TaqI-like C-terminal specificity domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003445725.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00530.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013239062.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585944.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0003959 - NADPH dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024258.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064129.1
COORDINATES: similar to AA sequence:RefSeq:WP_009532008.1
GO:0004333 - fumarate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
helicase C-terminal domain-containing protein
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159664.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_008516626.1
COORDINATES: similar to AA sequence:RefSeq:WP_014792141.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020711.2
COORDINATES: similar to AA sequence:RefSeq:WP_006522292.1
COORDINATES: similar to AA sequence:RefSeq:WP_000881776.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361596.1
L-erythro-3,5-diaminohexanoate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_008908921.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361592.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321236.1
GO:0046983 - protein dimerization activity [Evidence IEA]
OAM dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003513891.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008516614.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971459.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003423115.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013121736.1
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: similar to AA sequence:RefSeq:WP_012061969.1
COORDINATES: similar to AA sequence:RefSeq:WP_015263800.1
COORDINATES: similar to AA sequence:RefSeq:WP_003356155.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008907721.1
COORDINATES: similar to AA sequence:RefSeq:WP_013121727.1
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013623889.1
RNA polymerase sporulation sigma factor SigG
COORDINATES: protein motif:HMM:TIGR02837.1
COORDINATES: similar to AA sequence:RefSeq:WP_012282924.1
COORDINATES: similar to AA sequence:RefSeq:WP_014183465.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011877139.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
Fe-S cluster assembly scaffold protein NifU
COORDINATES: similar to AA sequence:RefSeq:WP_013821445.1
YedE family putative selenium transporter
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: protein motif:HMM:NF023251.2
COORDINATES: similar to AA sequence:RefSeq:WP_008516596.1
GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013843312.1
COORDINATES: protein motif:HMM:NF019522.2
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:NF014689.2
manganese efflux pump MntP family protein
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein arginine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_003378205.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009619523.1
COORDINATES: similar to AA sequence:RefSeq:WP_013121720.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011971477.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007787583.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF025806.2
cell division FtsA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011971455.1
COORDINATES: similar to AA sequence:RefSeq:WP_011194199.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971484.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014354630.1
COORDINATES: protein motif:HMM:TIGR01144.1
COORDINATES: protein motif:HMM:NF004402.0
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005815472.1
COORDINATES: similar to AA sequence:RefSeq:WP_015263781.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160398.1
COORDINATES: protein motif:HMM:NF009980.0
COORDINATES: protein motif:HMM:NF019609.2
COORDINATES: protein motif:HMM:NF020264.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971496.1
COORDINATES: protein motif:HMM:TIGR02870.1
COORDINATES: similar to AA sequence:RefSeq:WP_002089714.1
GO:0140110 - transcription regulator activity [Evidence IEA]
sporulation transcriptional regulator SpoIIID
COORDINATES: similar to AA sequence:RefSeq:WP_004618548.1
COORDINATES: protein motif:HMM:TIGR03506.1
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF039823.1
COORDINATES: protein motif:HMM:NF016836.2
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002381.0
COORDINATES: similar to AA sequence:RefSeq:WP_003542544.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064774.1
COORDINATES: similar to AA sequence:RefSeq:WP_010245488.1
GO:0006281 - DNA repair [Evidence IEA]; GO:0009650 - UV protection [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02152.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: similar to AA sequence:RefSeq:WP_007062788.1
COORDINATES: similar to AA sequence:RefSeq:WP_013810813.1
phosphoglucomutase/phosphomannomutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012062618.1
COORDINATES: similar to AA sequence:RefSeq:WP_004454919.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF038093.1
COORDINATES: similar to AA sequence:RefSeq:WP_011878973.1
COORDINATES: similar to AA sequence:RefSeq:WP_011988118.1
COORDINATES: similar to AA sequence:RefSeq:WP_011948884.1
glycine/sarcosine/betaine reductase component B subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005486918.1
glycine/sarcosine/betaine reductase complex selenoprotein A
COORDINATES: similar to AA sequence:RefSeq:WP_006316653.1
GO:0030700 - glycine reductase complex [Evidence IEA]
GO:0030699 - glycine reductase activity [Evidence IEA]
glycine reductase complex selenoprotein B
COORDINATES: similar to AA sequence:RefSeq:WP_014520415.1
glycine/sarcosine/betaine reductase complex component C subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_002844647.1
glycine/sarcosine/betaine reductase complex component C subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003428474.1
COORDINATES: protein motif:HMM:NF016083.2
COORDINATES: protein motif:HMM:TIGR00474.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: protein motif:HMM:NF040786.1
selenium metabolism-associated LysR family transcriptional regulator
COORDINATES: protein motif:HMM:NF002098.0
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF011068.0
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011197015.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119663.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016209001.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF023418.2
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003492342.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009252813.1
COORDINATES: protein motif:HMM:NF013258.2
COORDINATES: similar to AA sequence:RefSeq:WP_018211942.1
COORDINATES: protein motif:HMM:NF018946.2
COORDINATES: protein motif:HMM:TIGR04141.1
TIGR04141 family sporadically distributed protein
COORDINATES: similar to AA sequence:RefSeq:WP_000473666.1
COORDINATES: similar to AA sequence:RefSeq:WP_005811691.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006006 - glucose metabolic process [Evidence IEA]
glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_008413125.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003544065.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013379508.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF014726.2
phosphoribosylformylglycinamidine synthase subunit PurS
COORDINATES: similar to AA sequence:RefSeq:WP_003544068.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: protein motif:HMM:TIGR01736.1
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: similar to AA sequence:RefSeq:WP_002579502.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00878.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:TIGR00639.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013810353.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_010295610.1
COORDINATES: similar to AA sequence:RefSeq:WP_002589614.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355293.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355294.1
GO:0047324 - phosphoenolpyruvate-glycerone phosphotransferase activity [Evidence IEA]
dihydroxyacetone kinase phosphoryl donor subunit DhaM
COORDINATES: similar to AA sequence:RefSeq:WP_014356007.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003422895.1
COORDINATES: similar to AA sequence:RefSeq:WP_003408845.1
GO:0004371 - glycerone kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017212634.1
COORDINATES: similar to AA sequence:RefSeq:WP_008513950.1
COORDINATES: similar to AA sequence:RefSeq:WP_008513951.1
COORDINATES: protein motif:HMM:TIGR01297.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: similar to AA sequence:RefSeq:WP_011948678.1
COORDINATES: protein motif:HMM:NF019244.2
COORDINATES: similar to AA sequence:RefSeq:WP_004623082.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008426687.1
COORDINATES: similar to AA sequence:RefSeq:WP_007862543.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003543223.1
GO:0006281 - DNA repair [Evidence IEA]; GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000031419.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:TIGR00135.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_018213568.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: protein motif:HMM:NF004012.0
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF001033.0
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019278512.1
COORDINATES: similar to AA sequence:RefSeq:WP_004444309.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656539.1
COORDINATES: similar to AA sequence:RefSeq:WP_020815419.1
COORDINATES: similar to AA sequence:RefSeq:WP_007886744.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491356.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062244.1
arsenite efflux transporter metallochaperone ArsD
COORDINATES: similar to AA sequence:RefSeq:WP_012063035.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062246.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063037.1
COORDINATES: protein motif:HMM:TIGR00221.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_006427700.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008680376.1
COORDINATES: similar to AA sequence:RefSeq:WP_002605140.1
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
N-acetylmuramic acid 6-phosphate etherase
COORDINATES: similar to AA sequence:RefSeq:WP_005922626.1
COORDINATES: protein motif:HMM:NF039260.1
MupG family TIM beta-alpha barrel fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_005811520.1
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: similar to AA sequence:RefSeq:WP_015359610.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_016728553.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_016207466.1
COORDINATES: protein motif:HMM:TIGR01613.1
GO:0003896 - DNA primase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020345.2
Mor transcription activator family protein
COORDINATES: protein motif:HMM:NF016430.2
COORDINATES: similar to AA sequence:RefSeq:WP_012423493.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073752.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062348.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014624.2
COORDINATES: similar to AA sequence:RefSeq:WP_008419758.1
heavy metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: similar to AA sequence:RefSeq:WP_015944392.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909721.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064123.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064122.1
COORDINATES: similar to AA sequence:RefSeq:WP_015360386.1
COORDINATES: similar to AA sequence:RefSeq:WP_017416674.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876686.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360291.1
COORDINATES: protein motif:HMM:NF025636.2
TetR-like C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002328813.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062806.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064557.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_002582552.1
COORDINATES: similar to AA sequence:RefSeq:WP_002599035.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076527.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076526.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160196.1
COORDINATES: similar to AA sequence:RefSeq:WP_019850186.1
COORDINATES: similar to AA sequence:RefSeq:WP_003372808.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360770.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF021252.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158959.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR00945.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159946.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065664.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012065663.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065662.1
COORDINATES: similar to AA sequence:RefSeq:WP_012704889.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016208838.1
COORDINATES: similar to AA sequence:RefSeq:WP_012704045.1
COORDINATES: similar to AA sequence:RefSeq:WP_009171636.1
COORDINATES: similar to AA sequence:RefSeq:WP_003429050.1
COORDINATES: similar to AA sequence:RefSeq:WP_011948352.1
LytTR family transcriptional regulator DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003356781.1
COORDINATES: similar to AA sequence:RefSeq:WP_003361402.1
COORDINATES: similar to AA sequence:RefSeq:WP_010075172.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073366.1
COORDINATES: protein motif:HMM:NF021537.2
predicted Zn-dependent protease with a strongly conserved HExxH motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
DUF2268 domain-containing putative Zn-dependent protease
COORDINATES: similar to AA sequence:RefSeq:WP_002566013.1
COORDINATES: similar to AA sequence:RefSeq:WP_003496277.1
COORDINATES: similar to AA sequence:RefSeq:WP_003543949.1
tungsten cofactor oxidoreductase radical SAM maturase
COORDINATES: similar to AA sequence:RefSeq:WP_013361045.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361046.1
COORDINATES: similar to AA sequence:RefSeq:WP_009171817.1
COORDINATES: similar to AA sequence:RefSeq:WP_013238453.1
COORDINATES: similar to AA sequence:RefSeq:WP_016206132.1
COORDINATES: similar to AA sequence:RefSeq:WP_011861786.1
COORDINATES: similar to AA sequence:RefSeq:WP_011861091.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360942.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062671.1
COORDINATES: similar to AA sequence:RefSeq:WP_012720868.1
COORDINATES: protein motif:HMM:NF015368.2
COORDINATES: similar to AA sequence:RefSeq:WP_010073661.1
COORDINATES: similar to AA sequence:RefSeq:WP_009168290.1
COORDINATES: similar to AA sequence:RefSeq:WP_010234652.1
COORDINATES: similar to AA sequence:RefSeq:WP_009169834.1
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: similar to AA sequence:RefSeq:WP_002585630.1
COORDINATES: similar to AA sequence:RefSeq:WP_015615849.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062364.1
COORDINATES: similar to AA sequence:RefSeq:WP_012059321.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964717.1
COORDINATES: similar to AA sequence:RefSeq:WP_004629854.1
GO:0004146 - dihydrofolate reductase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004618544.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971588.1
COORDINATES: similar to AA sequence:RefSeq:WP_009896904.1
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064285.1
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: similar to AA sequence:RefSeq:WP_004037616.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063305.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063306.1
COORDINATES: protein motif:HMM:NF012436.2
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015043.2
COORDINATES: similar to AA sequence:RefSeq:WP_015395237.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060501.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012160155.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064690.1
COORDINATES: similar to AA sequence:RefSeq:WP_002604236.1
COORDINATES: protein motif:HMM:NF022811.2
COORDINATES: similar to AA sequence:RefSeq:WP_004613738.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074221.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158004.1
COORDINATES: similar to AA sequence:RefSeq:WP_016206123.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065386.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065385.1
GO:0140737 - encapsulin nanocompartment [Evidence IEA]
family 1 encapsulin nanocompartment shell protein
COORDINATES: similar to AA sequence:RefSeq:WP_004618431.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_005214544.1
COORDINATES: similar to AA sequence:RefSeq:WP_003404725.1
COORDINATES: similar to AA sequence:RefSeq:WP_015957820.1
siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006782127.1
S1-like domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016207666.1
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: similar to AA sequence:RefSeq:WP_017415449.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061690.1
COORDINATES: similar to AA sequence:RefSeq:WP_017415997.1
COORDINATES: protein motif:HMM:NF002083.0
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: similar to AA sequence:RefSeq:WP_010964713.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013724321.1
COORDINATES: similar to AA sequence:RefSeq:WP_003374908.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011010880.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_010168686.1
COORDINATES: similar to AA sequence:RefSeq:WP_010168684.1
COORDINATES: protein motif:HMM:NF012742.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004623611.1
COORDINATES: similar to AA sequence:RefSeq:WP_010248791.1
DNA topoisomerase (ATP-hydrolyzing) subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_005935273.1
GO:0015293 - symporter activity [Evidence IEA]
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009254205.1
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_009618411.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014342.2
COORDINATES: similar to AA sequence:RefSeq:WP_003357501.1
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_003489913.1
COORDINATES: similar to AA sequence:RefSeq:WP_007784898.1
COORDINATES: similar to AA sequence:RefSeq:WP_014827152.1
DNA-3-methyladenine glycosylase 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012064817.1
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:NF013346.2
COORDINATES: similar to AA sequence:RefSeq:WP_014829190.1
GO:0015019 - heparan-alpha-glucosaminide N-acetyltransferase activity [Evidence IEA]
GO:0007041 - lysosomal transport [Evidence IEA]
heparan-alpha-glucosaminide N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006783101.1
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_008680744.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491472.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530971.1
COORDINATES: similar to AA sequence:RefSeq:WP_003405404.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]; GO:0015574 - trehalose transmembrane transporter activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0015771 - trehalose transport [Evidence IEA]
PTS system trehalose-specific EIIBC component
COORDINATES: similar to AA sequence:RefSeq:WP_011590246.1
GO:0008788 - alpha,alpha-phosphotrehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003362976.1
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019226330.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064552.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016533.2
GO:0006468 - protein phosphorylation [Evidence IEA]; GO:0019748 - secondary metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009263598.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250389.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971646.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: similar to AA sequence:RefSeq:WP_011100650.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362251.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971769.1
COORDINATES: similar to AA sequence:RefSeq:WP_002599853.1
COORDINATES: protein motif:HMM:NF016413.2
COORDINATES: protein motif:HMM:NF033504.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064946.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015617726.1
COORDINATES: similar to AA sequence:RefSeq:WP_007063324.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0048473 - D-methionine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064948.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002600790.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379272.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013362138.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: protein motif:HMM:NF036305.2
COORDINATES: protein motif:HMM:NF017239.2
COORDINATES: protein motif:HMM:NF019350.2
COORDINATES: similar to AA sequence:RefSeq:WP_010296565.1
COORDINATES: similar to AA sequence:RefSeq:WP_011987485.1
COORDINATES: similar to AA sequence:RefSeq:WP_007285892.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
histidinol-phosphatase HisJ family protein
COORDINATES: protein motif:HMM:NF021449.2
DUF2161 family putative PD-(D/E)XK-type phosphodiesterase
COORDINATES: protein motif:HMM:NF015951.2
COORDINATES: similar to AA sequence:RefSeq:WP_012200643.1
COORDINATES: similar to AA sequence:RefSeq:WP_012047976.1
COORDINATES: similar to AA sequence:RefSeq:WP_012100703.1
COORDINATES: similar to AA sequence:RefSeq:WP_007064444.1
COORDINATES: protein motif:HMM:NF024230.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:NF018448.2
COORDINATES: similar to AA sequence:RefSeq:WP_010247227.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015043989.1
COORDINATES: similar to AA sequence:RefSeq:WP_014094754.1
COORDINATES: protein motif:HMM:NF025059.2
COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1
COORDINATES: similar to AA sequence:RefSeq:WP_013809928.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062462.1
COORDINATES: similar to AA sequence:RefSeq:WP_015393585.1
COORDINATES: similar to AA sequence:RefSeq:WP_003462276.1
Spx/MgsR family RNA polymerase-binding regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_003366022.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003432391.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014021.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003508727.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006904055.1
COORDINATES: similar to AA sequence:RefSeq:WP_012100710.1
COORDINATES: similar to AA sequence:RefSeq:WP_004628945.1
COORDINATES: protein motif:HMM:TIGR02104.1
GO:0051060 - pullulanase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015644.2
COORDINATES: similar to AA sequence:RefSeq:WP_003518674.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159854.1
GO:0004359 - glutaminase activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
GO:0001727 - lipid kinase activity [Evidence IEA]
GO:0005829 - cytosol [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA]
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity [Evidence IEA]; GO:0008413 - 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity [Evidence IEA]; GO:0003986 - acetyl-CoA hydrolase activity [Evidence IEA]; GO:0010945 - CoA pyrophosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0015938 - coenzyme A catabolic process [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009132 - nucleoside diphosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019199.2
COORDINATES: similar to AA sequence:RefSeq:WP_013843687.1
GO:0004587 - ornithine-oxo-acid transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:NF024806.2
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: similar to AA sequence:RefSeq:WP_019123276.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964008.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909496.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038788.1
GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL
COORDINATES: similar to AA sequence:RefSeq:WP_012159635.1
COORDINATES: similar to AA sequence:RefSeq:WP_013843360.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_009621024.1
COORDINATES: protein motif:HMM:NF016196.2
COORDINATES: protein motif:HMM:NF007825.0
COORDINATES: protein motif:HMM:NF018095.2
COORDINATES: similar to AA sequence:RefSeq:WP_008908831.1
COORDINATES: similar to AA sequence:RefSeq:WP_008516888.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626023.1
COORDINATES: similar to AA sequence:RefSeq:WP_004463649.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064178.1
COORDINATES: similar to AA sequence:RefSeq:WP_009619883.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: protein motif:HMM:NF014171.2
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012281256.1
COORDINATES: similar to AA sequence:RefSeq:WP_011878621.1
COORDINATES: similar to AA sequence:RefSeq:WP_013841399.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006524439.1
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_008909872.1
COORDINATES: similar to AA sequence:RefSeq:WP_008393929.1
COORDINATES: similar to AA sequence:RefSeq:WP_006716536.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0033818 - beta-ketoacyl-acyl-carrier-protein synthase III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003542985.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
enoyl-[acyl-carrier-protein] reductase FabK
COORDINATES: similar to AA sequence:RefSeq:WP_003401039.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003495675.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_010252475.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003359347.1
COORDINATES: protein motif:HMM:TIGR00531.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_009624072.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013810331.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_009623932.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011971453.1
COORDINATES: protein motif:HMM:NF019581.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012283549.1
COORDINATES: protein motif:HMM:NF012515.2
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018590644.1
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:NF002751.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:NF004397.1
COORDINATES: protein motif:HMM:NF002211.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02840.1
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011195169.1
COORDINATES: similar to AA sequence:RefSeq:WP_011194284.1
COORDINATES: similar to AA sequence:RefSeq:WP_014345373.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966898.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF020391.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00558
ribosomal protein L20 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013810002.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062849.1
COORDINATES: similar to AA sequence:RefSeq:WP_001138364.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120735.1
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003360159.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_019226609.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: protein motif:HMM:NF006375.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01069.1
COORDINATES: protein motif:HMM:NF009676.0
COORDINATES: similar to AA sequence:RefSeq:WP_008518312.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012160313.1
COORDINATES: protein motif:HMM:NF021501.2
COORDINATES: similar to AA sequence:RefSeq:WP_013291721.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909463.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012032195.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006715977.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_008909936.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR02895.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120071.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_008518866.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006903948.1
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04086.1
COORDINATES: similar to AA sequence:RefSeq:WP_007784314.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064288.1
COORDINATES: similar to AA sequence:RefSeq:WP_016208111.1
COORDINATES: similar to AA sequence:RefSeq:WP_020492751.1
COORDINATES: protein motif:HMM:TIGR01536.1
COORDINATES: protein motif:HMM:NF014471.2
COORDINATES: similar to AA sequence:RefSeq:WP_008120212.1
COORDINATES: similar to AA sequence:RefSeq:WP_016728914.1
GO:0031179 - peptide modification [Evidence IEA]
thioether cross-link-forming SCIFF peptide maturase
COORDINATES: similar to AA sequence:RefSeq:WP_002579471.1
COORDINATES: protein motif:HMM:NF018884.2
PP2C family protein-serine/threonine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_008516116.1
COORDINATES: similar to AA sequence:RefSeq:WP_012032205.1
COORDINATES: protein motif:HMM:TIGR01129.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_003470557.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909925.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA]
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003517065.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120091.1
COORDINATES: protein motif:HMM:TIGR03994.1
COORDINATES: similar to AA sequence:RefSeq:WP_003403591.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015758508.1
COORDINATES: similar to AA sequence:RefSeq:WP_016324014.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119167.1
COORDINATES: similar to AA sequence:RefSeq:WP_007787242.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013379519.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062348.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013120775.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_013840531.1
GO:0030420 - establishment of competence for transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011461676.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065274.1
COORDINATES: similar to AA sequence:RefSeq:WP_008676601.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392347.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017414054.1
COORDINATES: similar to AA sequence:RefSeq:WP_000489997.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158073.1
COORDINATES: similar to AA sequence:RefSeq:WP_011948618.1
COORDINATES: protein motif:HMM:NF022986.2
COORDINATES: protein motif:HMM:NF022641.2
COORDINATES: similar to AA sequence:RefSeq:WP_014314392.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064467.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_015393802.1
COORDINATES: similar to AA sequence:RefSeq:WP_011197332.1
COORDINATES: similar to AA sequence:RefSeq:WP_011197331.1
COORDINATES: similar to AA sequence:RefSeq:WP_008721803.1
COORDINATES: similar to AA sequence:RefSeq:WP_011098585.1
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: protein motif:HMM:NF015568.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008080 - N-acetyltransferase activity [Evidence IEA]
bifunctional NUDIX hydrolase family protein/GNAT family N-acetyltransferase
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF013591.2
COORDINATES: similar to AA sequence:RefSeq:WP_006903222.1
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064845.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064844.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012064843.1
COORDINATES: similar to AA sequence:RefSeq:WP_015614758.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064842.1
COORDINATES: similar to AA sequence:RefSeq:WP_007784832.1
COORDINATES: protein motif:HMM:NF024937.2
COORDINATES: protein motif:HMM:TIGR01767.2
GO:0046522 - S-methyl-5-thioribose kinase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012343477.1
COORDINATES: protein motif:HMM:NF007509.0
GO:0005355 - glucose transmembrane transporter activity [Evidence IEA]; GO:0005363 - maltose transmembrane transporter activity [Evidence IEA]
maltose/glucose-specific PTS transporter subunit IIBC
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: similar to AA sequence:RefSeq:WP_010244080.1
COORDINATES: protein motif:HMM:NF019844.2
GO:0070064 - proline-rich region binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003373054.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073206.1
COORDINATES: protein motif:HMM:NF013740.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012422970.1
COORDINATES: similar to AA sequence:RefSeq:WP_012721358.1
COORDINATES: similar to AA sequence:RefSeq:WP_003479516.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907501.1
COORDINATES: similar to AA sequence:RefSeq:WP_008706915.1
COORDINATES: similar to AA sequence:RefSeq:WP_003371645.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064893.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625888.1
COORDINATES: protein motif:HMM:NF025608.2
GO:0009976 - tocopherol cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019849981.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064799.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064795.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119777.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013119778.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:NF022431.2
COORDINATES: similar to AA sequence:RefSeq:WP_017414017.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062670.1
COORDINATES: similar to AA sequence:RefSeq:WP_017415355.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016983.2
COORDINATES: similar to AA sequence:RefSeq:WP_008425427.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062634.1
COORDINATES: protein motif:HMM:NF037100.2
COORDINATES: protein motif:HMM:NF014043.2
COORDINATES: similar to AA sequence:RefSeq:WP_009614909.1
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: similar to AA sequence:RefSeq:WP_003440779.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009168403.1
COORDINATES: similar to AA sequence:RefSeq:WP_007778725.1
COORDINATES: similar to AA sequence:RefSeq:WP_014261957.1
COORDINATES: protein motif:HMM:NF015239.2
GO:0017111 - ribonucleoside triphosphate phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03310.1
GO:0070567 - cytidylyltransferase activity [Evidence IEA]
molybdenum cofactor cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009614891.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014182982.1
COORDINATES: similar to AA sequence:RefSeq:WP_014182983.1
aconitase/3-isopropylmalate dehydratase large subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014182984.1
COORDINATES: similar to AA sequence:RefSeq:WP_014182985.1
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog.; Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009614884.1
COORDINATES: similar to AA sequence:RefSeq:WP_009614882.1
COORDINATES: similar to AA sequence:RefSeq:WP_013824117.1
isocitrate lyase/PEP mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009168400.1
COORDINATES: similar to AA sequence:RefSeq:WP_003440783.1
COORDINATES: similar to AA sequence:RefSeq:WP_017751382.1
COORDINATES: similar to AA sequence:RefSeq:WP_014182980.1
COORDINATES: protein motif:HMM:NF016526.2
GO:0009372 - quorum sensing [Evidence IEA]
accessory gene regulator B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019163309.1
COORDINATES: similar to AA sequence:RefSeq:WP_016284787.1
COORDINATES: similar to AA sequence:RefSeq:WP_011641600.1
COORDINATES: protein motif:HMM:NF024787.2
HNH endonuclease domain-containing protein
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007594197.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491413.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008423303.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012307.2
COORDINATES: similar to AA sequence:RefSeq:WP_003447095.1
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: similar to AA sequence:RefSeq:WP_009623828.1
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: protein motif:HMM:NF039513.1
COORDINATES: protein motif:HMM:NF025205.2
SbcC/MukB-like Walker B domain-containing protein
COORDINATES: protein motif:HMM:NF021498.2
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: similar to AA sequence:RefSeq:WP_002598221.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_017416607.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355103.1
COORDINATES: similar to AA sequence:RefSeq:WP_006441997.1
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF017347.2
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
branched-chain amino acid transport system II carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_013841718.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200676.1
GO:0043295 - glutathione binding [Evidence IEA]; GO:0004602 - glutathione peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012059687.1
COORDINATES: protein motif:HMM:NF024865.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010077545.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971627.1
COORDINATES: protein motif:HMM:TIGR04088.1
SipW-dependent-type signal peptide-containing protein
COORDINATES: protein motif:HMM:NF036452.2
COORDINATES: similar to AA sequence:RefSeq:WP_012102788.1
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_014254601.1
COORDINATES: similar to AA sequence:RefSeq:WP_004608123.1
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007060677.1
COORDINATES: protein motif:HMM:NF027796.2
COORDINATES: similar to AA sequence:RefSeq:WP_012062798.1
CPBP family glutamic-type intramembrane protease
COORDINATES: similar to AA sequence:RefSeq:WP_003375176.1
COORDINATES: similar to AA sequence:RefSeq:WP_016207065.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064600.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:NF019886.2
COORDINATES: similar to AA sequence:RefSeq:WP_003479463.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160103.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015393639.1
COORDINATES: similar to AA sequence:RefSeq:WP_009242422.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062594.1
COORDINATES: similar to AA sequence:RefSeq:WP_003511769.1
COORDINATES: protein motif:HMM:NF024491.2
COORDINATES: similar to AA sequence:RefSeq:WP_015358187.1
COORDINATES: protein motif:HMM:NF022636.2
COORDINATES: similar to AA sequence:RefSeq:WP_004624306.1
COORDINATES: protein motif:HMM:NF024136.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011878559.1
COORDINATES: similar to AA sequence:RefSeq:WP_014185022.1
COORDINATES: similar to AA sequence:RefSeq:WP_003374925.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612119.1
COORDINATES: similar to AA sequence:RefSeq:WP_003448207.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009202894.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_006715726.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010250618.1
COORDINATES: protein motif:HMM:NF019401.2
COORDINATES: protein motif:HMM:NF013766.2
GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_009623447.1
COORDINATES: similar to AA sequence:RefSeq:WP_002845959.1
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_008975320.1
COORDINATES: similar to AA sequence:RefSeq:WP_015943306.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: similar to AA sequence:RefSeq:WP_006715223.1
COORDINATES: similar to AA sequence:RefSeq:WP_008410695.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
PLD nuclease N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015614674.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062261.1
COORDINATES: protein motif:HMM:NF014228.2
GO:0070403 - NAD+ binding [Evidence IEA]
Sir2 family NAD-dependent protein deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_015392267.1
COORDINATES: similar to AA sequence:RefSeq:WP_012720743.1
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_003378873.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064374.1
COORDINATES: similar to AA sequence:RefSeq:WP_003356573.1
LDCC motif putative metal-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012064379.1
COORDINATES: similar to AA sequence:RefSeq:WP_013810037.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012064363.1
COORDINATES: similar to AA sequence:RefSeq:WP_003447387.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062353.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158916.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_017414072.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073349.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF014690.2
GO:0043772 - acyl-phosphate glycerol-3-phosphate acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]; GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013174540.1
COORDINATES: similar to AA sequence:RefSeq:WP_003428286.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011877146.1
COORDINATES: similar to AA sequence:RefSeq:WP_015757781.1
COORDINATES: similar to AA sequence:RefSeq:WP_009616397.1
COORDINATES: protein motif:HMM:NF018633.2
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159508.1
COORDINATES: similar to AA sequence:RefSeq:WP_002597378.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003515579.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0042173 - regulation of sporulation resulting in formation of a cellular spore [Evidence IEA]
RNA polymerase sporulation sigma factor SigK
COORDINATES: similar to AA sequence:RefSeq:WP_011639962.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020090.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF012694.2
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: similar to AA sequence:RefSeq:WP_014254624.1
late competence development ComFB family protein
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: similar to AA sequence:RefSeq:WP_013120616.1
COORDINATES: similar to AA sequence:RefSeq:WP_013810598.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF022554.2
COORDINATES: protein motif:HMM:NF016253.2
GO:0043683 - type IV pilus assembly [Evidence IEA]; GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003542125.1
COORDINATES: similar to AA sequence:RefSeq:WP_014901920.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625228.1
COORDINATES: similar to AA sequence:RefSeq:WP_011641114.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF024929.2
COORDINATES: similar to AA sequence:RefSeq:WP_013725019.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120059.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
D-alanine--D-alanine ligase family protein
COORDINATES: protein motif:HMM:NF016825.2
cyclodeaminase/cyclohydrolase family protein
COORDINATES: protein motif:HMM:NF014445.2
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012157950.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_015358673.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060574.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_015358675.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_014904604.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011590314.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063617.1
COORDINATES: similar to AA sequence:RefSeq:WP_015944633.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909845.1
COORDINATES: protein motif:HMM:NF040318.1
COORDINATES: protein motif:HMM:TIGR02833.1
COORDINATES: similar to AA sequence:RefSeq:WP_011639991.1
COORDINATES: similar to AA sequence:RefSeq:WP_012032339.1
COORDINATES: protein motif:HMM:TIGR02829.1
COORDINATES: protein motif:HMM:NF021121.2
COORDINATES: protein motif:HMM:NF024097.2
COORDINATES: similar to AA sequence:RefSeq:WP_010252604.1
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:NF033218.1
alkaline shock response membrane anchor protein AmaP
COORDINATES: similar to AA sequence:RefSeq:WP_006521745.1
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF013012.2
COORDINATES: similar to AA sequence:RefSeq:WP_008514978.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003518669.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015359138.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006572566.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361557.1
COORDINATES: similar to AA sequence:RefSeq:WP_013810548.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013120560.1
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: protein motif:HMM:TIGR02860.1
COORDINATES: similar to AA sequence:RefSeq:WP_013843023.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0042173 - regulation of sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007287338.1
COORDINATES: protein motif:HMM:NF022824.2
GO:0055070 - copper ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160254.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014828207.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907394.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010966357.1
GO:0050182 - phosphate butyryltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011195955.1
COORDINATES: similar to AA sequence:RefSeq:WP_003420702.1
COORDINATES: similar to AA sequence:RefSeq:WP_018085107.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160249.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_003494860.1
COORDINATES: similar to AA sequence:RefSeq:WP_008412649.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065162.1
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: protein motif:HMM:TIGR01883.1
COORDINATES: protein motif:HMM:NF024384.2
COORDINATES: protein motif:HMM:TIGR02831.1
COORDINATES: similar to AA sequence:RefSeq:WP_015260822.1
COORDINATES: similar to AA sequence:RefSeq:WP_015260823.1
COORDINATES: protein motif:HMM:NF014307.2
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014256015.1
COORDINATES: similar to AA sequence:RefSeq:WP_013842995.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020815115.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589297.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159445.1
COORDINATES: similar to AA sequence:RefSeq:WP_003375470.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012970.2
COORDINATES: similar to AA sequence:RefSeq:WP_017414673.1
GO:0045152 - antisigma factor binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063347.1
GO:0004672 - protein kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023586.2
COORDINATES: similar to AA sequence:RefSeq:WP_006904808.1
COORDINATES: similar to AA sequence:RefSeq:WP_003540340.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120516.1
COORDINATES: similar to AA sequence:RefSeq:WP_017751593.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120514.1
COORDINATES: similar to AA sequence:RefSeq:WP_012032401.1
COORDINATES: protein motif:HMM:NF021504.2
acyl-CoA dehydratase activase-related protein
COORDINATES: protein motif:HMM:NF017828.2
COORDINATES: similar to AA sequence:RefSeq:WP_011877484.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007048879.1
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: similar to AA sequence:RefSeq:WP_008514914.1
COORDINATES: protein motif:HMM:NF022615.2
COORDINATES: similar to AA sequence:RefSeq:WP_013120495.1
COORDINATES: similar to AA sequence:RefSeq:WP_003543807.1
COORDINATES: similar to AA sequence:RefSeq:WP_013174740.1
COORDINATES: similar to AA sequence:RefSeq:WP_003373627.1
COORDINATES: similar to AA sequence:RefSeq:WP_013822939.1
COORDINATES: similar to AA sequence:RefSeq:WP_003544293.1
COORDINATES: similar to AA sequence:RefSeq:WP_008519250.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]; GO:0006468 - protein phosphorylation [Evidence IEA]
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_013841209.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013121147.1
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: protein motif:HMM:NF014676.2
COORDINATES: similar to AA sequence:RefSeq:WP_006715926.1
COORDINATES: protein motif:HMM:NF016689.2
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_012062587.1
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
uroporphyrinogen decarboxylase family protein
COORDINATES: protein motif:HMM:NF017762.2
COORDINATES: protein motif:HMM:NF014805.2
COORDINATES: protein motif:HMM:TIGR00035.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012301881.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012060745.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF003339.0
COORDINATES: similar to AA sequence:RefSeq:WP_004625452.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257112.1
COORDINATES: protein motif:HMM:TIGR00813.1
GO:0015370 - solute:sodium symporter activity [Evidence IEA]
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006774394.1
COORDINATES: similar to AA sequence:RefSeq:WP_015757304.1
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein.; This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011721337.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF022233.2
tetraprenyl-beta-curcumene synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011194998.1
COORDINATES: protein motif:HMM:NF014055.2
aspartate carbamoyltransferase regulatory subunit
COORDINATES: protein motif:HMM:NF012412.2
COORDINATES: similar to AA sequence:RefSeq:WP_002597167.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00857.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013976471.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002599078.1
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
carbamoyl phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014255537.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
COORDINATES: protein motif:HMM:NF013161.2
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012283169.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065235.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003361512.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00374.1
COORDINATES: similar to AA sequence:RefSeq:WP_008513785.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF001124.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_015617437.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010964009.1
COORDINATES: similar to AA sequence:RefSeq:WP_012282828.1
COORDINATES: protein motif:HMM:NF016535.2
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:NF014173.2
COORDINATES: similar to AA sequence:RefSeq:WP_013625826.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002843817.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362261.1
metal-sensitive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012282773.1
cytochrome c biogenesis CcdA family protein
COORDINATES: protein motif:HMM:NF020123.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005811397.1
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_003540018.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:NF016860.2
COORDINATES: protein motif:HMM:TIGR02214.1
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001126.0
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_008516031.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013810691.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010480.0
COORDINATES: similar to AA sequence:RefSeq:WP_008516023.1
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005811377.1
COORDINATES: protein motif:HMM:TIGR01174.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008516016.1
COORDINATES: protein motif:HMM:NF015384.2
COORDINATES: similar to AA sequence:RefSeq:WP_008412325.1
RNA polymerase sporulation sigma factor SigE
COORDINATES: similar to AA sequence:RefSeq:WP_008516008.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015756670.1
COORDINATES: similar to AA sequence:RefSeq:WP_003365963.1
COORDINATES: protein motif:HMM:NF024112.2
HlyD family efflux transporter periplasmic adaptor subunit
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: protein motif:HMM:NF037631.2
COORDINATES: similar to AA sequence:RefSeq:WP_008518398.1
COORDINATES: protein motif:HMM:NF019292.2
COORDINATES: similar to AA sequence:RefSeq:WP_008907566.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013887.2
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
3-dehydroquinate synthase family protein
COORDINATES: protein motif:HMM:TIGR01356.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012283157.1
COORDINATES: protein motif:HMM:TIGR02890.1
COORDINATES: similar to AA sequence:RefSeq:WP_013810092.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017415687.1
COORDINATES: protein motif:HMM:TIGR00801.1
COORDINATES: protein motif:HMM:NF017633.2
COORDINATES: protein motif:HMM:TIGR01116.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005388 - P-type calcium transporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
calcium-translocating P-type ATPase, SERCA-type
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_013986063.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909434.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008517660.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_009890797.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:NF004066.1
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010243401.1
COORDINATES: similar to AA sequence:RefSeq:WP_015514716.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014186945.1
COORDINATES: protein motif:HMM:NF011494.0
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_003458521.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF033484.1
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: protein motif:HMM:NF033483.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
Stk1 family PASTA domain-containing Ser/Thr kinase
COORDINATES: similar to AA sequence:RefSeq:WP_018589794.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02357.1
GO:0015234 - thiamine transmembrane transporter activity [Evidence IEA]
GO:0015888 - thiamine transport [Evidence IEA]
energy-coupled thiamine transporter ThiT
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006988.0
COORDINATES: similar to AA sequence:RefSeq:WP_008516980.1
COORDINATES: similar to AA sequence:RefSeq:WP_006523598.1
COORDINATES: similar to AA sequence:RefSeq:WP_008516987.1
COORDINATES: protein motif:HMM:TIGR03599.1
COORDINATES: similar to AA sequence:RefSeq:WP_017211988.1
GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006565 - L-serine catabolic process [Evidence IEA]
L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011989269.1
COORDINATES: protein motif:HMM:NF008165.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006715552.1
COORDINATES: similar to AA sequence:RefSeq:WP_006715974.1
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_010247451.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008516993.1
sporulation integral membrane protein YlbJ
COORDINATES: protein motif:HMM:NF010191.0
COORDINATES: similar to AA sequence:RefSeq:WP_012159303.1
GO:0008776 - acetate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006085 - acetyl-CoA biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_003419113.1
COORDINATES: similar to AA sequence:RefSeq:WP_011837932.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0045717 - negative regulation of fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159307.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013823343.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02191.1
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014313358.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_012159318.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516319.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007287299.1
COORDINATES: similar to AA sequence:RefSeq:WP_004066078.1
COORDINATES: protein motif:HMM:TIGR02273.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002579613.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_008517029.1
COORDINATES: protein motif:HMM:NF021981.2
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008517030.1
COORDINATES: similar to AA sequence:RefSeq:WP_009002635.1
COORDINATES: protein motif:HMM:NF000594.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014119.2
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018213891.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461660.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015523331.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_014254753.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063748.1
COORDINATES: similar to AA sequence:RefSeq:WP_013496101.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254889.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063429.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0006007 - glucose catabolic process [Evidence IEA]; GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008518758.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012031787.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016869 - intramolecular transferase activity, transferring amino groups [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006536 - glutamate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014255154.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013120418.1
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: protein motif:HMM:NF001399.0
COORDINATES: similar to AA sequence:RefSeq:WP_008909006.1
GTP-sensing pleiotropic transcriptional regulator CodY
COORDINATES: protein motif:HMM:TIGR01396.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015925501.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: protein motif:HMM:NF014143.2
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_012063849.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: similar to AA sequence:RefSeq:WP_013361951.1
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015413.2
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:NF015896.2
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02530.1
TIGR02530 family flagellar biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_012033235.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255139.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657449.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012283289.1
COORDINATES: similar to AA sequence:RefSeq:WP_011837840.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013120396.1
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: similar to AA sequence:RefSeq:WP_006522077.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: similar to AA sequence:RefSeq:WP_013841296.1
COORDINATES: protein motif:HMM:TIGR01400.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: similar to AA sequence:RefSeq:WP_015925479.1
COORDINATES: protein motif:HMM:TIGR03499.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF018894.2
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012283302.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: protein motif:HMM:NF016398.2
COORDINATES: similar to AA sequence:RefSeq:WP_015043577.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF015894.2
COORDINATES: similar to AA sequence:RefSeq:WP_008517743.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120232.1
COORDINATES: similar to AA sequence:RefSeq:WP_015758644.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014828426.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003362572.1
COORDINATES: protein motif:HMM:NF013327.2
GO:0004605 - phosphatidate cytidylyltransferase activity [Evidence IEA]
GO:0016024 - CDP-diacylglycerol biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004033521.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: similar to AA sequence:RefSeq:WP_004455769.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010073762.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013986625.1
COORDINATES: similar to AA sequence:RefSeq:WP_013175178.1
COORDINATES: similar to AA sequence:RefSeq:WP_003376692.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013841917.1
GO:0000028 - ribosomal small subunit assembly [Evidence IEA]; GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014828416.1
COORDINATES: similar to AA sequence:RefSeq:WP_010965106.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908798.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159383.1
COORDINATES: similar to AA sequence:RefSeq:WP_002450542.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004162.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_015925174.1
COORDINATES: similar to AA sequence:RefSeq:WP_003438316.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: protein motif:HMM:NF020945.2
aspartyl-phosphate phosphatase Spo0E family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013495448.1
COORDINATES: protein motif:HMM:NF006162.0
COORDINATES: similar to AA sequence:RefSeq:WP_008517814.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038583.1
COORDINATES: similar to AA sequence:RefSeq:WP_003376276.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120275.1
COORDINATES: similar to AA sequence:RefSeq:WP_018085723.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000139810.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:NF025401.2
COORDINATES: protein motif:HMM:NF014703.2
COORDINATES: similar to AA sequence:RefSeq:WP_014254667.1
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008909612.1
COORDINATES: similar to AA sequence:RefSeq:WP_012342771.1
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_013821663.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019850712.1
COORDINATES: protein motif:HMM:NF024855.2
COORDINATES: similar to AA sequence:RefSeq:WP_003438333.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_003541302.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008518888.1
COORDINATES: protein motif:HMM:NF001813.0
COORDINATES: similar to AA sequence:RefSeq:WP_004625803.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014255533.1
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: similar to AA sequence:RefSeq:WP_008413385.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019226689.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003866776.1
COORDINATES: protein motif:HMM:NF013413.2
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: similar to AA sequence:RefSeq:WP_012281492.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158748.1
COORDINATES: similar to AA sequence:RefSeq:WP_013810172.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_014254938.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00585.2
COORDINATES: protein motif:HMM:NF016340.2
GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361443.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_015045117.1
COORDINATES: similar to AA sequence:RefSeq:WP_014345135.1
COORDINATES: protein motif:HMM:NF014036.2
COORDINATES: similar to AA sequence:RefSeq:WP_014255198.1
COORDINATES: similar to AA sequence:RefSeq:WP_008514520.1
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: similar to AA sequence:RefSeq:WP_011099733.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516302.1
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
heme NO-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014427.2
COORDINATES: similar to AA sequence:RefSeq:WP_003460237.1
GO:0015558 - secondary active p-aminobenzoyl-glutamate transmembrane transporter activity [Evidence IEA]
GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013360593.1
COORDINATES: similar to AA sequence:RefSeq:WP_011989078.1
GO:0016846 - carbon-sulfur lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005330547.1
COORDINATES: protein motif:HMM:NF013106.2
GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
biosynthetic peptidoglycan transglycosylase
COORDINATES: protein motif:HMM:TIGR01007.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: similar to AA sequence:RefSeq:WP_011971656.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013691.2
COORDINATES: similar to AA sequence:RefSeq:WP_019849397.1